paper-manager 0.5.0 → 0.6.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +8 -1
- package/dist/commands/literature.js +56 -21
- package/dist/commands/literature.js.map +1 -1
- package/dist/commands/util.d.ts +2 -0
- package/dist/commands/util.js +24 -0
- package/dist/commands/util.js.map +1 -0
- package/dist/db/index.d.ts +4 -6
- package/dist/db/index.js +29 -42
- package/dist/db/index.js.map +1 -1
- package/dist/db/index.test.js +26 -73
- package/dist/db/index.test.js.map +1 -1
- package/dist/db/operations/knowledge-bases.d.ts +6 -6
- package/dist/db/operations/knowledge-bases.js +37 -34
- package/dist/db/operations/knowledge-bases.js.map +1 -1
- package/dist/db/operations/knowledge-bases.test.js +3 -5
- package/dist/db/operations/knowledge-bases.test.js.map +1 -1
- package/dist/db/operations/literatures.d.ts +8 -8
- package/dist/db/operations/literatures.js +63 -66
- package/dist/db/operations/literatures.js.map +1 -1
- package/dist/db/operations/literatures.test.js +6 -9
- package/dist/db/operations/literatures.test.js.map +1 -1
- package/dist/db/schema.d.ts +370 -1
- package/dist/db/schema.js +29 -0
- package/dist/db/schema.js.map +1 -1
- package/dist/db/test-utils.d.ts +3 -3
- package/dist/db/test-utils.js +6 -8
- package/dist/db/test-utils.js.map +1 -1
- package/dist/extractor/index.d.ts +3 -2
- package/dist/extractor/index.js +2 -2
- package/dist/extractor/index.js.map +1 -1
- package/dist/extractor/pdf.d.ts +11 -0
- package/dist/extractor/pdf.js +65 -0
- package/dist/extractor/pdf.js.map +1 -1
- package/dist/extractor/pdf.test.d.ts +1 -0
- package/dist/extractor/pdf.test.js +106 -0
- package/dist/extractor/pdf.test.js.map +1 -0
- package/dist/index.js +2 -0
- package/dist/index.js.map +1 -1
- package/dist/types/index.d.ts +5 -26
- package/dist/types/index.js +4 -19
- package/dist/types/index.js.map +1 -1
- package/dist/types/index.test.js +12 -69
- package/dist/types/index.test.js.map +1 -1
- package/package.json +3 -1
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{"version":3,"file":"knowledge-bases.js","sourceRoot":"","sources":["../../../src/db/operations/knowledge-bases.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,MAAM,aAAa,CAAC;
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{"version":3,"file":"knowledge-bases.js","sourceRoot":"","sources":["../../../src/db/operations/knowledge-bases.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,MAAM,aAAa,CAAC;AAEtC,OAAO,EAAE,IAAI,EAAE,EAAE,EAAE,MAAM,aAAa,CAAC;AAIvC,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC;AAE9C,MAAM,UAAU,mBAAmB,CACjC,EAAe,EACf,KAAsE;IAEtE,MAAM,EAAE,GAAG,MAAM,CAAC,UAAU,EAAE,CAAC;IAC/B,MAAM,GAAG,GAAG,IAAI,IAAI,EAAE,CAAC;IAEvB,MAAM,GAAG,GAAG,EAAE;SACX,MAAM,CAAC,cAAc,CAAC;SACtB,MAAM,CAAC;QACN,EAAE;QACF,IAAI,EAAE,KAAK,CAAC,IAAI;QAChB,WAAW,EAAE,KAAK,CAAC,WAAW;QAC9B,gBAAgB,EAAE,KAAK,CAAC,gBAAgB;QACxC,SAAS,EAAE,GAAG;QACd,SAAS,EAAE,GAAG;KACf,CAAC;SACD,SAAS,EAAE;SACX,GAAG,EAAE,CAAC;IAET,IAAI,CAAC,GAAG;QAAE,MAAM,IAAI,KAAK,CAAC,iCAAiC,CAAC,CAAC;IAC7D,OAAO,GAAG,CAAC;AACb,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,EAAe,EAAE,EAAU;IAC1D,MAAM,GAAG,GAAG,EAAE,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,cAAc,CAAC,CAAC,KAAK,CAAC,EAAE,CAAC,cAAc,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC;IACpF,OAAO,GAAG,IAAI,IAAI,CAAC;AACrB,CAAC;AAED,MAAM,UAAU,kBAAkB,CAAC,EAAe;IAChD,OAAO,EAAE,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,cAAc,CAAC,CAAC,OAAO,CAAC,IAAI,CAAC,cAAc,CAAC,SAAS,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC;AACxF,CAAC;AAED,MAAM,UAAU,mBAAmB,CACjC,EAAe,EACf,EAAU,EACV,KAA+B;IAE/B,MAAM,OAAO,GAAgD,EAAE,CAAC;IAEhE,IAAI,KAAK,CAAC,IAAI,KAAK,SAAS;QAAE,OAAO,CAAC,IAAI,GAAG,KAAK,CAAC,IAAI,CAAC;IACxD,IAAI,KAAK,CAAC,WAAW,KAAK,SAAS;QAAE,OAAO,CAAC,WAAW,GAAG,KAAK,CAAC,WAAW,CAAC;IAE7E,IAAI,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,gBAAgB,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC;IAEvE,OAAO,CAAC,SAAS,GAAG,IAAI,IAAI,EAAE,CAAC;IAE/B,MAAM,GAAG,GAAG,EAAE;SACX,MAAM,CAAC,cAAc,CAAC;SACtB,GAAG,CAAC,OAAO,CAAC;SACZ,KAAK,CAAC,EAAE,CAAC,cAAc,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC;SAChC,SAAS,EAAE;SACX,GAAG,EAAE,CAAC;IACT,OAAO,GAAG,IAAI,IAAI,CAAC;AACrB,CAAC;AAED,MAAM,UAAU,mBAAmB,CAAC,EAAe,EAAE,EAAU;IAC7D,MAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,cAAc,CAAC,CAAC,KAAK,CAAC,EAAE,CAAC,cAAc,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC;IAChF,OAAO,MAAM,CAAC,OAAO,GAAG,CAAC,CAAC;AAC5B,CAAC"}
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import {
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import { sql } from "drizzle-orm";
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import { beforeEach, describe, expect, it } from "vitest";
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import { createTestDb } from "../test-utils.js";
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import { createKnowledgeBase, deleteKnowledgeBase, getKnowledgeBase, listKnowledgeBases, } from "./knowledge-bases.js";
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let db;
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beforeEach(() => {
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db = createTestDb();
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});
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afterEach(() => {
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db.close();
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});
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const input = {
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name: "Test KB",
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description: "A test knowledge base",
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it("returns knowledge bases ordered by created_at DESC", () => {
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const kb1 = createKnowledgeBase(db, { ...input, name: "First" });
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// Manually backdate kb1 so ordering is deterministic
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db.
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db.run(sql `UPDATE knowledge_bases SET created_at = created_at - 1000 WHERE id = ${kb1.id}`);
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const kb2 = createKnowledgeBase(db, { ...input, name: "Second" });
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const list = listKnowledgeBases(db);
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expect(list).toHaveLength(2);
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{"version":3,"file":"knowledge-bases.test.js","sourceRoot":"","sources":["../../../src/db/operations/knowledge-bases.test.ts"],"names":[],"mappings":"
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{"version":3,"file":"knowledge-bases.test.js","sourceRoot":"","sources":["../../../src/db/operations/knowledge-bases.test.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,GAAG,EAAE,MAAM,aAAa,CAAC;AAClC,OAAO,EAAE,UAAU,EAAE,QAAQ,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,QAAQ,CAAC;AAG1D,OAAO,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAC;AAChD,OAAO,EACL,mBAAmB,EACnB,mBAAmB,EACnB,gBAAgB,EAChB,kBAAkB,GACnB,MAAM,sBAAsB,CAAC;AAE9B,IAAI,EAAe,CAAC;AAEpB,UAAU,CAAC,GAAG,EAAE;IACd,EAAE,GAAG,YAAY,EAAE,CAAC;AACtB,CAAC,CAAC,CAAC;AAEH,MAAM,KAAK,GAAG;IACZ,IAAI,EAAE,SAAS;IACf,WAAW,EAAE,uBAAuB;IACpC,gBAAgB,EAAE,SAAS;CAC5B,CAAC;AAEF,gEAAgE;AAEhE,QAAQ,CAAC,qBAAqB,EAAE,GAAG,EAAE;IACnC,EAAE,CAAC,uEAAuE,EAAE,GAAG,EAAE;QAC/E,MAAM,EAAE,GAAG,mBAAmB,CAAC,EAAE,EAAE,KAAK,CAAC,CAAC;QAC1C,MAAM,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,OAAO,CAAC,gEAAgE,CAAC,CAAC;QACxF,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;QAChC,MAAM,CAAC,EAAE,CAAC,WAAW,CAAC,CAAC,IAAI,CAAC,uBAAuB,CAAC,CAAC;QACrD,MAAM,CAAC,EAAE,CAAC,gBAAgB,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;QAC5C,MAAM,CAAC,EAAE,CAAC,SAAS,CAAC,CAAC,cAAc,CAAC,IAAI,CAAC,CAAC;QAC1C,MAAM,CAAC,EAAE,CAAC,SAAS,CAAC,CAAC,cAAc,CAAC,IAAI,CAAC,CAAC;IAC5C,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,kDAAkD,EAAE,GAAG,EAAE;QAC1D,mBAAmB,CAAC,EAAE,EAAE,KAAK,CAAC,CAAC;QAC/B,MAAM,CAAC,GAAG,EAAE,CAAC,mBAAmB,CAAC,EAAE,EAAE,KAAK,CAAC,CAAC,CAAC,OAAO,EAAE,CAAC;IACzD,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC;AAEH,gEAAgE;AAEhE,QAAQ,CAAC,kBAAkB,EAAE,GAAG,EAAE;IAChC,EAAE,CAAC,kCAAkC,EAAE,GAAG,EAAE;QAC1C,MAAM,OAAO,GAAG,mBAAmB,CAAC,EAAE,EAAE,KAAK,CAAC,CAAC;QAC/C,MAAM,KAAK,GAAG,gBAAgB,CAAC,EAAE,EAAE,OAAO,CAAC,EAAE,CAAC,CAAC;QAC/C,MAAM,CAAC,KAAK,CAAC,CAAC,GAAG,CAAC,QAAQ,EAAE,CAAC;QAC7B,MAAM,CAAC,KAAM,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACnC,MAAM,CAAC,KAAM,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;IACtC,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,kCAAkC,EAAE,GAAG,EAAE;QAC1C,MAAM,CAAC,gBAAgB,CAAC,EAAE,EAAE,cAAc,CAAC,CAAC,CAAC,QAAQ,EAAE,CAAC;IAC1D,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC;AAEH,gEAAgE;AAEhE,QAAQ,CAAC,oBAAoB,EAAE,GAAG,EAAE;IAClC,EAAE,CAAC,sDAAsD,EAAE,GAAG,EAAE;QAC9D,MAAM,CAAC,kBAAkB,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;IAC7C,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,oDAAoD,EAAE,GAAG,EAAE;QAC5D,MAAM,GAAG,GAAG,mBAAmB,CAAC,EAAE,EAAE,EAAE,GAAG,KAAK,EAAE,IAAI,EAAE,OAAO,EAAE,CAAC,CAAC;QACjE,qDAAqD;QACrD,EAAE,CAAC,GAAG,CAAC,GAAG,CAAA,wEAAwE,GAAG,CAAC,EAAE,EAAE,CAAC,CAAC;QAC5F,MAAM,GAAG,GAAG,mBAAmB,CAAC,EAAE,EAAE,EAAE,GAAG,KAAK,EAAE,IAAI,EAAE,QAAQ,EAAE,CAAC,CAAC;QAElE,MAAM,IAAI,GAAG,kBAAkB,CAAC,EAAE,CAAC,CAAC;QACpC,MAAM,CAAC,IAAI,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC;QAC7B,wEAAwE;QACxE,MAAM,CAAC,IAAI,CAAC,CAAC,CAAE,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;QACjC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAE,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;IACnC,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC;AAEH,gEAAgE;AAEhE,QAAQ,CAAC,qBAAqB,EAAE,GAAG,EAAE;IACnC,EAAE,CAAC,qDAAqD,EAAE,GAAG,EAAE;QAC7D,MAAM,EAAE,GAAG,mBAAmB,CAAC,EAAE,EAAE,KAAK,CAAC,CAAC;QAC1C,MAAM,CAAC,mBAAmB,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QAClD,MAAM,CAAC,gBAAgB,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,QAAQ,EAAE,CAAC;IACjD,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,mCAAmC,EAAE,GAAG,EAAE;QAC3C,MAAM,CAAC,mBAAmB,CAAC,EAAE,EAAE,cAAc,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAC9D,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC"}
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import type BetterSqlite3 from "better-sqlite3";
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import type { CreateLiteratureInput, LiteratureMetadata, UpdateLiteratureInput } from "../../types/index.js";
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export declare function
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export declare function
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export declare function
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export declare function
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export declare function
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export declare function
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import type { AppDatabase } from "../index.js";
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export declare function createLiterature(db: AppDatabase, input: CreateLiteratureInput): LiteratureMetadata;
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export declare function getLiterature(db: AppDatabase, id: string): LiteratureMetadata | null;
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export declare function listLiteratures(db: AppDatabase, knowledgeBaseId: string): LiteratureMetadata[];
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export declare function updateLiterature(db: AppDatabase, id: string, input: UpdateLiteratureInput): LiteratureMetadata | null;
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export declare function deleteLiterature(db: AppDatabase, id: string): boolean;
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export declare function deleteLiteraturesByKnowledgeBaseId(db: AppDatabase, knowledgeBaseId: string): number;
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export declare function getLiteraturesByKnowledgeBaseId(db: AppDatabase, knowledgeBaseId: string): LiteratureMetadata[];
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import * as crypto from "node:crypto";
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import {
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import { desc, eq } from "drizzle-orm";
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import { literatures } from "../schema.js";
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export function createLiterature(db, input) {
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const id = crypto.randomUUID();
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const now = Date
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const now = new Date();
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const row = db
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.insert(literatures)
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.values({
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id,
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title: input.title,
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titleTranslation: input.titleTranslation,
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author: input.author,
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abstract: input.abstract,
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summary: input.summary,
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keywords: input.keywords,
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url: input.url,
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doi: input.doi,
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notes: input.notes,
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knowledgeBaseId: input.knowledgeBaseId,
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createdAt: now,
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updatedAt: now,
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})
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.get();
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throw new Error("Failed to insert literature");
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return row;
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}
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export function getLiterature(db, id) {
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const row = db.
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return null;
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return dbRowToLiterature(row);
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const row = db.select().from(literatures).where(eq(literatures.id, id)).get();
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return row ?? null;
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}
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export function listLiteratures(db, knowledgeBaseId) {
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return db
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.select()
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.from(literatures)
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.where(eq(literatures.knowledgeBaseId, knowledgeBaseId))
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.orderBy(desc(literatures.createdAt))
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.all();
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export function updateLiterature(db, id, input) {
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values.push(JSON.stringify(input.keywords));
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}
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values.push(input.url);
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fields.push("knowledge_base_id = ?");
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}
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fields.push("updated_at = ?");
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values.push(id);
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db.prepare(`UPDATE literatures SET ${fields.join(", ")} WHERE id = ?`).run(...values);
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return getLiterature(db, id);
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+
const updates = {};
|
|
44
|
+
if (input.title !== undefined)
|
|
45
|
+
updates.title = input.title;
|
|
46
|
+
if (input.titleTranslation !== undefined)
|
|
47
|
+
updates.titleTranslation = input.titleTranslation;
|
|
48
|
+
if (input.author !== undefined)
|
|
49
|
+
updates.author = input.author;
|
|
50
|
+
if (input.abstract !== undefined)
|
|
51
|
+
updates.abstract = input.abstract;
|
|
52
|
+
if (input.summary !== undefined)
|
|
53
|
+
updates.summary = input.summary;
|
|
54
|
+
if (input.keywords !== undefined)
|
|
55
|
+
updates.keywords = input.keywords;
|
|
56
|
+
if (input.url !== undefined)
|
|
57
|
+
updates.url = input.url;
|
|
58
|
+
if (input.doi !== undefined)
|
|
59
|
+
updates.doi = input.doi;
|
|
60
|
+
if (input.notes !== undefined)
|
|
61
|
+
updates.notes = input.notes;
|
|
62
|
+
if (input.knowledgeBaseId !== undefined)
|
|
63
|
+
updates.knowledgeBaseId = input.knowledgeBaseId;
|
|
64
|
+
if (Object.keys(updates).length === 0)
|
|
65
|
+
return getLiterature(db, id);
|
|
66
|
+
updates.updatedAt = new Date();
|
|
67
|
+
const row = db.update(literatures).set(updates).where(eq(literatures.id, id)).returning().get();
|
|
68
|
+
return row ?? null;
|
|
73
69
|
}
|
|
74
70
|
export function deleteLiterature(db, id) {
|
|
75
|
-
const result = db.
|
|
71
|
+
const result = db.delete(literatures).where(eq(literatures.id, id)).run();
|
|
76
72
|
return result.changes > 0;
|
|
77
73
|
}
|
|
78
74
|
export function deleteLiteraturesByKnowledgeBaseId(db, knowledgeBaseId) {
|
|
79
75
|
const result = db
|
|
80
|
-
.
|
|
81
|
-
.
|
|
76
|
+
.delete(literatures)
|
|
77
|
+
.where(eq(literatures.knowledgeBaseId, knowledgeBaseId))
|
|
78
|
+
.run();
|
|
82
79
|
return result.changes;
|
|
83
80
|
}
|
|
84
81
|
export function getLiteraturesByKnowledgeBaseId(db, knowledgeBaseId) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"literatures.js","sourceRoot":"","sources":["../../../src/db/operations/literatures.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,MAAM,aAAa,CAAC;
|
|
1
|
+
{"version":3,"file":"literatures.js","sourceRoot":"","sources":["../../../src/db/operations/literatures.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,MAAM,aAAa,CAAC;AAEtC,OAAO,EAAE,IAAI,EAAE,EAAE,EAAE,MAAM,aAAa,CAAC;AAQvC,OAAO,EAAE,WAAW,EAAE,MAAM,cAAc,CAAC;AAE3C,MAAM,UAAU,gBAAgB,CAC9B,EAAe,EACf,KAA4B;IAE5B,MAAM,EAAE,GAAG,MAAM,CAAC,UAAU,EAAE,CAAC;IAC/B,MAAM,GAAG,GAAG,IAAI,IAAI,EAAE,CAAC;IAEvB,MAAM,GAAG,GAAG,EAAE;SACX,MAAM,CAAC,WAAW,CAAC;SACnB,MAAM,CAAC;QACN,EAAE;QACF,KAAK,EAAE,KAAK,CAAC,KAAK;QAClB,gBAAgB,EAAE,KAAK,CAAC,gBAAgB;QACxC,MAAM,EAAE,KAAK,CAAC,MAAM;QACpB,QAAQ,EAAE,KAAK,CAAC,QAAQ;QACxB,OAAO,EAAE,KAAK,CAAC,OAAO;QACtB,QAAQ,EAAE,KAAK,CAAC,QAAQ;QACxB,GAAG,EAAE,KAAK,CAAC,GAAG;QACd,GAAG,EAAE,KAAK,CAAC,GAAG;QACd,KAAK,EAAE,KAAK,CAAC,KAAK;QAClB,eAAe,EAAE,KAAK,CAAC,eAAe;QACtC,SAAS,EAAE,GAAG;QACd,SAAS,EAAE,GAAG;KACf,CAAC;SACD,SAAS,EAAE;SACX,GAAG,EAAE,CAAC;IAET,IAAI,CAAC,GAAG;QAAE,MAAM,IAAI,KAAK,CAAC,6BAA6B,CAAC,CAAC;IACzD,OAAO,GAAG,CAAC;AACb,CAAC;AAED,MAAM,UAAU,aAAa,CAAC,EAAe,EAAE,EAAU;IACvD,MAAM,GAAG,GAAG,EAAE,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,WAAW,CAAC,CAAC,KAAK,CAAC,EAAE,CAAC,WAAW,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC;IAC9E,OAAO,GAAG,IAAI,IAAI,CAAC;AACrB,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,EAAe,EAAE,eAAuB;IACtE,OAAO,EAAE;SACN,MAAM,EAAE;SACR,IAAI,CAAC,WAAW,CAAC;SACjB,KAAK,CAAC,EAAE,CAAC,WAAW,CAAC,eAAe,EAAE,eAAe,CAAC,CAAC;SACvD,OAAO,CAAC,IAAI,CAAC,WAAW,CAAC,SAAS,CAAC,CAAC;SACpC,GAAG,EAAE,CAAC;AACX,CAAC;AAED,MAAM,UAAU,gBAAgB,CAC9B,EAAe,EACf,EAAU,EACV,KAA4B;IAE5B,MAAM,OAAO,GAA6C,EAAE,CAAC;IAE7D,IAAI,KAAK,CAAC,KAAK,KAAK,SAAS;QAAE,OAAO,CAAC,KAAK,GAAG,KAAK,CAAC,KAAK,CAAC;IAC3D,IAAI,KAAK,CAAC,gBAAgB,KAAK,SAAS;QAAE,OAAO,CAAC,gBAAgB,GAAG,KAAK,CAAC,gBAAgB,CAAC;IAC5F,IAAI,KAAK,CAAC,MAAM,KAAK,SAAS;QAAE,OAAO,CAAC,MAAM,GAAG,KAAK,CAAC,MAAM,CAAC;IAC9D,IAAI,KAAK,CAAC,QAAQ,KAAK,SAAS;QAAE,OAAO,CAAC,QAAQ,GAAG,KAAK,CAAC,QAAQ,CAAC;IACpE,IAAI,KAAK,CAAC,OAAO,KAAK,SAAS;QAAE,OAAO,CAAC,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC;IACjE,IAAI,KAAK,CAAC,QAAQ,KAAK,SAAS;QAAE,OAAO,CAAC,QAAQ,GAAG,KAAK,CAAC,QAAQ,CAAC;IACpE,IAAI,KAAK,CAAC,GAAG,KAAK,SAAS;QAAE,OAAO,CAAC,GAAG,GAAG,KAAK,CAAC,GAAG,CAAC;IACrD,IAAI,KAAK,CAAC,GAAG,KAAK,SAAS;QAAE,OAAO,CAAC,GAAG,GAAG,KAAK,CAAC,GAAG,CAAC;IACrD,IAAI,KAAK,CAAC,KAAK,KAAK,SAAS;QAAE,OAAO,CAAC,KAAK,GAAG,KAAK,CAAC,KAAK,CAAC;IAC3D,IAAI,KAAK,CAAC,eAAe,KAAK,SAAS;QAAE,OAAO,CAAC,eAAe,GAAG,KAAK,CAAC,eAAe,CAAC;IAEzF,IAAI,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,aAAa,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC;IAEpE,OAAO,CAAC,SAAS,GAAG,IAAI,IAAI,EAAE,CAAC;IAE/B,MAAM,GAAG,GAAG,EAAE,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,KAAK,CAAC,EAAE,CAAC,WAAW,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAC,SAAS,EAAE,CAAC,GAAG,EAAE,CAAC;IAChG,OAAO,GAAG,IAAI,IAAI,CAAC;AACrB,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,EAAe,EAAE,EAAU;IAC1D,MAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC,KAAK,CAAC,EAAE,CAAC,WAAW,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC;IAC1E,OAAO,MAAM,CAAC,OAAO,GAAG,CAAC,CAAC;AAC5B,CAAC;AAED,MAAM,UAAU,kCAAkC,CAChD,EAAe,EACf,eAAuB;IAEvB,MAAM,MAAM,GAAG,EAAE;SACd,MAAM,CAAC,WAAW,CAAC;SACnB,KAAK,CAAC,EAAE,CAAC,WAAW,CAAC,eAAe,EAAE,eAAe,CAAC,CAAC;SACvD,GAAG,EAAE,CAAC;IACT,OAAO,MAAM,CAAC,OAAO,CAAC;AACxB,CAAC;AAED,MAAM,UAAU,+BAA+B,CAC7C,EAAe,EACf,eAAuB;IAEvB,OAAO,eAAe,CAAC,EAAE,EAAE,eAAe,CAAC,CAAC;AAC9C,CAAC"}
|
|
@@ -1,4 +1,5 @@
|
|
|
1
|
-
import {
|
|
1
|
+
import { sql } from "drizzle-orm";
|
|
2
|
+
import { beforeEach, describe, expect, it } from "vitest";
|
|
2
3
|
import { createTestDb } from "../test-utils.js";
|
|
3
4
|
import { createKnowledgeBase } from "./knowledge-bases.js";
|
|
4
5
|
import { createLiterature, deleteLiterature, deleteLiteraturesByKnowledgeBaseId, getLiterature, listLiteratures, updateLiterature, } from "./literatures.js";
|
|
@@ -14,9 +15,6 @@ beforeEach(() => {
|
|
|
14
15
|
});
|
|
15
16
|
kbId = kb.id;
|
|
16
17
|
});
|
|
17
|
-
afterEach(() => {
|
|
18
|
-
db.close();
|
|
19
|
-
});
|
|
20
18
|
function makeInput(overrides) {
|
|
21
19
|
return {
|
|
22
20
|
title: "A Paper",
|
|
@@ -26,6 +24,7 @@ function makeInput(overrides) {
|
|
|
26
24
|
summary: null,
|
|
27
25
|
keywords: ["ai", "ml"],
|
|
28
26
|
url: null,
|
|
27
|
+
doi: null,
|
|
29
28
|
notes: { read: "yes" },
|
|
30
29
|
knowledgeBaseId: kbId,
|
|
31
30
|
...overrides,
|
|
@@ -148,12 +147,10 @@ describe("foreign key: ON DELETE SET NULL", () => {
|
|
|
148
147
|
it("sets knowledge_base_id to null when KB is deleted", () => {
|
|
149
148
|
const lit = createLiterature(db, makeInput());
|
|
150
149
|
// Delete the KB directly via SQL to trigger FK cascade
|
|
151
|
-
db.
|
|
152
|
-
|
|
153
|
-
// but FK cascade sets it to NULL. Check the raw row instead.
|
|
154
|
-
const raw = db.prepare("SELECT knowledge_base_id FROM literatures WHERE id = ?").get(lit.id);
|
|
150
|
+
db.run(sql `DELETE FROM knowledge_bases WHERE id = ${kbId}`);
|
|
151
|
+
const raw = db.get(sql `SELECT knowledge_base_id FROM literatures WHERE id = ${lit.id}`);
|
|
155
152
|
expect(raw).toBeDefined();
|
|
156
|
-
expect(raw
|
|
153
|
+
expect(raw.knowledge_base_id).toBeNull();
|
|
157
154
|
});
|
|
158
155
|
});
|
|
159
156
|
//# sourceMappingURL=literatures.test.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"literatures.test.js","sourceRoot":"","sources":["../../../src/db/operations/literatures.test.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"literatures.test.js","sourceRoot":"","sources":["../../../src/db/operations/literatures.test.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,GAAG,EAAE,MAAM,aAAa,CAAC;AAClC,OAAO,EAAE,UAAU,EAAE,QAAQ,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,QAAQ,CAAC;AAI1D,OAAO,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAC;AAChD,OAAO,EAAE,mBAAmB,EAAE,MAAM,sBAAsB,CAAC;AAC3D,OAAO,EACL,gBAAgB,EAChB,gBAAgB,EAChB,kCAAkC,EAClC,aAAa,EACb,eAAe,EACf,gBAAgB,GACjB,MAAM,kBAAkB,CAAC;AAE1B,IAAI,EAAe,CAAC;AACpB,IAAI,IAAY,CAAC;AAEjB,UAAU,CAAC,GAAG,EAAE;IACd,EAAE,GAAG,YAAY,EAAE,CAAC;IACpB,0CAA0C;IAC1C,MAAM,EAAE,GAAG,mBAAmB,CAAC,EAAE,EAAE;QACjC,IAAI,EAAE,SAAS;QACf,WAAW,EAAE,MAAM;QACnB,gBAAgB,EAAE,SAAS;KAC5B,CAAC,CAAC;IACH,IAAI,GAAG,EAAE,CAAC,EAAE,CAAC;AACf,CAAC,CAAC,CAAC;AAEH,SAAS,SAAS,CAAC,SAA0C;IAC3D,OAAO;QACL,KAAK,EAAE,SAAS;QAChB,gBAAgB,EAAE,IAAI;QACtB,MAAM,EAAE,OAAO;QACf,QAAQ,EAAE,wBAAwB;QAClC,OAAO,EAAE,IAAI;QACb,QAAQ,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC;QACtB,GAAG,EAAE,IAAI;QACT,GAAG,EAAE,IAAI;QACT,KAAK,EAAE,EAAE,IAAI,EAAE,KAAK,EAAE;QACtB,eAAe,EAAE,IAAI;QACrB,GAAG,SAAS;KACb,CAAC;AACJ,CAAC;AAED,gEAAgE;AAEhE,QAAQ,CAAC,kBAAkB,EAAE,GAAG,EAAE;IAChC,EAAE,CAAC,uDAAuD,EAAE,GAAG,EAAE;QAC/D,MAAM,GAAG,GAAG,gBAAgB,CAAC,EAAE,EAAE,SAAS,EAAE,CAAC,CAAC;QAC9C,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,OAAO,CAAC,gEAAgE,CAAC,CAAC;QACzF,MAAM,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;QAClC,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;QACjC,MAAM,CAAC,GAAG,CAAC,eAAe,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACzC,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,8CAA8C,EAAE,GAAG,EAAE;QACtD,MAAM,GAAG,GAAG,gBAAgB,CAC1B,EAAE,EACF,SAAS,CAAC;YACR,QAAQ,EAAE,CAAC,eAAe,EAAE,aAAa,CAAC;YAC1C,KAAK,EAAE,EAAE,QAAQ,EAAE,aAAa,EAAE,QAAQ,EAAE,QAAQ,EAAE;SACvD,CAAC,CACH,CAAC;QACF,MAAM,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,CAAC,eAAe,EAAE,aAAa,CAAC,CAAC,CAAC;QAC/D,MAAM,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,OAAO,CAAC,EAAE,QAAQ,EAAE,aAAa,EAAE,QAAQ,EAAE,QAAQ,EAAE,CAAC,CAAC;IAC7E,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,kCAAkC,EAAE,GAAG,EAAE;QAC1C,MAAM,GAAG,GAAG,gBAAgB,CAAC,EAAE,EAAE,SAAS,CAAC,EAAE,QAAQ,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,CAAC,CAAC,CAAC;QACzE,MAAM,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjC,MAAM,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;IAChC,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC;AAEH,gEAAgE;AAEhE,QAAQ,CAAC,eAAe,EAAE,GAAG,EAAE;IAC7B,EAAE,CAAC,8BAA8B,EAAE,GAAG,EAAE;QACtC,MAAM,OAAO,GAAG,gBAAgB,CAAC,EAAE,EAAE,SAAS,EAAE,CAAC,CAAC;QAClD,MAAM,KAAK,GAAG,aAAa,CAAC,EAAE,EAAE,OAAO,CAAC,EAAE,CAAC,CAAC;QAC5C,MAAM,CAAC,KAAK,CAAC,CAAC,GAAG,CAAC,QAAQ,EAAE,CAAC;QAC7B,MAAM,CAAC,KAAM,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;IACvC,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,kCAAkC,EAAE,GAAG,EAAE;QAC1C,MAAM,CAAC,aAAa,CAAC,EAAE,EAAE,cAAc,CAAC,CAAC,CAAC,QAAQ,EAAE,CAAC;IACvD,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC;AAEH,gEAAgE;AAEhE,QAAQ,CAAC,iBAAiB,EAAE,GAAG,EAAE;IAC/B,EAAE,CAAC,oDAAoD,EAAE,GAAG,EAAE;QAC5D,MAAM,GAAG,GAAG,mBAAmB,CAAC,EAAE,EAAE;YAClC,IAAI,EAAE,UAAU;YAChB,WAAW,EAAE,OAAO;YACpB,gBAAgB,EAAE,SAAS;SAC5B,CAAC,CAAC;QAEH,gBAAgB,CAAC,EAAE,EAAE,SAAS,CAAC,EAAE,KAAK,EAAE,SAAS,EAAE,CAAC,CAAC,CAAC;QACtD,gBAAgB,CAAC,EAAE,EAAE,SAAS,CAAC,EAAE,KAAK,EAAE,SAAS,EAAE,eAAe,EAAE,GAAG,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC;QAE/E,MAAM,IAAI,GAAG,eAAe,CAAC,EAAE,EAAE,IAAI,CAAC,CAAC;QACvC,MAAM,CAAC,IAAI,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC;QAC7B,MAAM,CAAC,IAAI,CAAC,CAAC,CAAE,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;IACzC,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,qDAAqD,EAAE,GAAG,EAAE;QAC7D,MAAM,CAAC,eAAe,CAAC,EAAE,EAAE,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;IAChD,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC;AAEH,gEAAgE;AAEhE,QAAQ,CAAC,kBAAkB,EAAE,GAAG,EAAE;IAChC,EAAE,CAAC,mCAAmC,EAAE,GAAG,EAAE;QAC3C,MAAM,GAAG,GAAG,gBAAgB,CAAC,EAAE,EAAE,SAAS,EAAE,CAAC,CAAC;QAC9C,MAAM,OAAO,GAAG,gBAAgB,CAAC,EAAE,EAAE,GAAG,CAAC,EAAE,EAAE,EAAE,KAAK,EAAE,WAAW,EAAE,CAAC,CAAC;QAErE,MAAM,CAAC,OAAO,CAAC,CAAC,GAAG,CAAC,QAAQ,EAAE,CAAC;QAC/B,MAAM,CAAC,OAAQ,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,WAAW,CAAC,CAAC;QACzC,8BAA8B;QAC9B,MAAM,CAAC,OAAQ,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;QACtC,MAAM,CAAC,OAAQ,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC;IAClD,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,+BAA+B,EAAE,GAAG,EAAE;QACvC,MAAM,GAAG,GAAG,gBAAgB,CAAC,EAAE,EAAE,SAAS,EAAE,CAAC,CAAC;QAC9C,MAAM,OAAO,GAAG,gBAAgB,CAAC,EAAE,EAAE,GAAG,CAAC,EAAE,EAAE;YAC3C,QAAQ,EAAE,CAAC,SAAS,CAAC;YACrB,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE;SAC3B,CAAC,CAAC;QAEH,MAAM,CAAC,OAAQ,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC;QAC/C,MAAM,CAAC,OAAQ,CAAC,KAAK,CAAC,CAAC,OAAO,CAAC,EAAE,OAAO,EAAE,MAAM,EAAE,CAAC,CAAC;IACtD,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,8BAA8B,EAAE,GAAG,EAAE;QACtC,MAAM,GAAG,GAAG,gBAAgB,CAAC,EAAE,EAAE,SAAS,EAAE,CAAC,CAAC;QAC9C,MAAM,OAAO,GAAG,gBAAgB,CAAC,EAAE,EAAE,GAAG,CAAC,EAAE,EAAE,EAAE,KAAK,EAAE,SAAS,EAAE,CAAC,CAAC;QAEnE,MAAM,CAAC,OAAQ,CAAC,SAAS,CAAC,OAAO,EAAE,CAAC,CAAC,sBAAsB,CAAC,GAAG,CAAC,SAAS,CAAC,OAAO,EAAE,CAAC,CAAC;IACvF,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,gEAAgE,EAAE,GAAG,EAAE;QACxE,MAAM,GAAG,GAAG,gBAAgB,CAAC,EAAE,EAAE,SAAS,EAAE,CAAC,CAAC;QAC9C,MAAM,SAAS,GAAG,gBAAgB,CAAC,EAAE,EAAE,GAAG,CAAC,EAAE,EAAE,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