pantheon-opencode 1.4.3 → 1.5.0-beta.2

package/.pantheon/code-mode/README.md

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+# Pantheon Code Mode Scripts
+
+Orchestration scripts executed via the `pantheon-code-mode` MCP server
+(`execute_code_script`). All scripts live in this directory.
+
+## Script Index
+
+| Script | Language | Purpose |
+|--------|----------|---------|
+| `checkpoint_session.py` | Python | Full checkpoint management: init, save, status, resume, list, health, archive, cleanup |
+| `checkpoint-session.sh` | Bash | Shell wrapper for `checkpoint_session.py` |
+| `compress-inline.py` | Python | Inline context compression — score, compress, stats, batch modes |
+| `session-end-save.py` | Python | Session-end Vector DB backup scaffold |
+| `session-end-save.sh` | Bash | Shell wrapper for `session-end-save.py` |
+| `example-sync.sh` | Bash | Minimal demo script for testing `execute_code_script` |
+
+## checkpoint_session.py Commands
+
+| Command | Description |
+|---------|-------------|
+| `init <slug>` | Create session.json and heartbeat.json |
+| `save <slug>` | Save checkpoint + update heartbeat |
+| `status <slug>` | Show human-readable session status |
+| `resume <slug>` | Print latest checkpoint as JSON |
+| `list <slug>` | List all checkpoints for a slug |
+| `health <slug>` | Validate session consistency (required fields, checkpoint integrity, stale detection) |
+| `archive <slug>` | Move session to `.pantheon/deepwork/archive/<slug>/` |
+| `cleanup [--dry-run]` | Remove orphan directories, temp files, flag stale sessions |
+
+## Invocation
+
+From an agent prompt, call via the MCP tool:
+
+```
+execute_code_script("checkpoint-session.sh", args=["init", "my-task"])
+```
+
+Or directly for cleanup (which doesn't need `checkpoint-session.sh`):
+
+```
+execute_code_script("checkpoint_session.py", args=["cleanup", "--dry-run"])
+```
+
+All scripts are idempotent unless noted otherwise.
+
+## Script Metadata (YAML Frontmatter)
+
+Scripts may declare optional metadata in a comment-style YAML frontmatter
+block at the top of the file (after the shebang). Comment lines keep the
+script a valid executable in both bash and python:
+
+```python
+#!/usr/bin/env python3
+# ---
+# description: Runs the checkpoint save
+# timeout: 5
+# allowed_args:
+#   - compress
+#   - --text
+# ---
+import sys
+...
+```
+
+Supported keys:
+
+| Key | Type | Purpose |
+|-----|------|---------|
+| `description` | string | Human-readable purpose, surfaced in tool output metadata |
+| `timeout` | int (seconds) | Per-script execution timeout override (default 30s). The subprocess is killed when it elapses. |
+| `allowed_args` | list of strings | Allowlist of CLI args accepted by `execute_code_script`. Passing an unlisted arg is rejected before execution. Omit for unrestricted args. |
+
+Metadata is exposed in two places:
+
+- `execute_code_script(..., json_output=true)` returns a structured dict with
+  `stdout`, `stderr`, `exit_code`, `duration_ms`, `timed_out`, `timeout_s`
+  and `metadata` (the parsed frontmatter).
+- `pantheon://code-mode/scripts/{name}` resource prepends a `# metadata`
+  section when frontmatter is present.
+
+Malformed or missing frontmatter fails open: the script executes with the
+30s default timeout and no arg restriction.
+
+## Conventions
+
+- **Wrapper pattern**: `.sh` files are thin wrappers that pass `$@` to a
+  `.py` implementation. This keeps CLI ergonomics (shell-native `--flags`)
+  while keeping logic in Python where it's more reliable.
+- **Exit codes**: 0 = success / no issues, 1 = action taken (recovery
+  dispatched, etc.), 2+ = error.
+- **Paths**: Scripts resolve their own directory at runtime; never hardcode.
+- **Output**: Artifacts go under `.pantheon/memory-bank/.tmp/` (gitignored).
+  See `skill: artifact-management`.

package/.pantheon/code-mode/checkpoint-session.py

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+#!/usr/bin/env python3
+"""CLI shim — delegates to ``checkpoint_session`` module."""
+
+from checkpoint_session import main
+
+if __name__ == "__main__":
+    main()

package/.pantheon/code-mode/checkpoint-session.sh

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+#!/bin/bash
+# Wrapper for checkpoint_session.py
+# Usage: ./checkpoint-session.sh <command> <slug>
+#
+# Commands: init, save, status, resume, list, health, archive, cleanup
+
+set -euo pipefail
+
+SCRIPT_DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
+
+python3 "$SCRIPT_DIR/checkpoint_session.py" "$@"

package/.pantheon/code-mode/checkpoint_session.py

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+#!/usr/bin/env python3
+"""
+Checkpoint Session Manager for Auto-Continue V2.
+
+Structured persistence for session checkpoints, heartbeat tracking, and
+session metadata for long autonomous deepwork sessions.
+
+Usage:
+    python checkpoint_session.py <command> <slug> [options]
+
+Commands:
+    init    — Initialize session files (session.json + heartbeat.json)
+    save    — Save checkpoint and update heartbeat
+    status  — Show current session status
+    resume  — Read latest checkpoint for resume
+    list    — List all checkpoints for slug
+    health  — Validate session consistency
+    archive — Move session to archive/
+    cleanup — Clean orphaned sessions and temp files (--dry-run for preview)
+"""
+
+from __future__ import annotations
+
+import hashlib
+import json
+import sys
+import shutil
+from datetime import UTC, datetime, timedelta
+from pathlib import Path
+
+# ---------------------------------------------------------------------------
+# Constants
+# ---------------------------------------------------------------------------
+
+SCHEMA_VERSION = 2
+DEEPDIR = Path(".pantheon/deepwork")
+ARCHIVEDIR = DEEPDIR / "archive"
+STALE_THRESHOLD = timedelta(hours=24)
+
+
+# ---------------------------------------------------------------------------
+# Path helpers
+# ---------------------------------------------------------------------------
+
+
+def get_slug_dir(slug: str) -> Path:
+    """Return the deepwork directory path for a given slug."""
+    return DEEPDIR / slug
+
+
+def get_checkpoints(slug_dir: Path) -> list[tuple[int, Path]]:
+    """Return sorted list of (number, path) for all checkpoint files.
+
+    Only files matching checkpoint-N.json where *N* is a positive
+    integer are considered.  Dotfiles and non-numeric suffixes are
+    ignored.
+    """
+    checkpoints: list[tuple[int, Path]] = []
+    for f in slug_dir.glob("checkpoint-*.json"):
+        stem = f.stem  # e.g. "checkpoint-3"
+        parts = stem.split("-", 1)
+        if len(parts) != 2:  # noqa: PLR2004
+            continue
+        try:
+            n = int(parts[1])
+        except (ValueError, IndexError):
+            continue
+        checkpoints.append((n, f))
+    checkpoints.sort(key=lambda x: x[0])
+    return checkpoints
+
+
+# ---------------------------------------------------------------------------
+# Commands
+# ---------------------------------------------------------------------------
+
+
+def cmd_init(slug: str) -> None:
+    """Create session.json and heartbeat.json for *slug*."""
+    sdir = get_slug_dir(slug)
+    sdir.mkdir(parents=True, exist_ok=True)
+
+    now = datetime.now(UTC).isoformat()
+
+    session = {
+        "task_id": slug,
+        "mode": "deepwork",
+        "start_time": now,
+        "last_activity": now,
+        "status": "in_progress",
+        "gate_history": [],
+        "stop_reason": None,
+        "stopped_at": None,
+    }
+    _write_json(sdir / "session.json", session)
+
+    heartbeat = {
+        "slug": slug,
+        "last_action": now,
+        "turn_count": 0,
+        "current_phase": 0,
+        "status": "alive",
+        "next_action": "initialized",
+    }
+    _write_json(sdir / "heartbeat.json", heartbeat)
+
+    print(f"Session initialized for {slug}")
+
+
+def cmd_save(slug: str) -> None:
+    """Save a checkpoint and update heartbeat / session metadata."""
+    sdir = get_slug_dir(slug)
+    if not sdir.exists():
+        print(f"No session found for {slug}")
+        return
+
+    now = datetime.now(UTC).isoformat()
+
+    # Read existing STATUS.md for context hash
+    context_hash = _compute_context_hash(sdir)
+
+    # Load or create session metadata
+    session_file = sdir / "session.json"
+    if session_file.exists():
+        session = _read_json(session_file)
+    else:
+        session = {
+            "task_id": slug,
+            "mode": "deepwork",
+            "start_time": now,
+            "last_activity": now,
+            "status": "in_progress",
+            "gate_history": [],
+            "stop_reason": None,
+            "stopped_at": None,
+        }
+
+    turn_count = session.get("turn_count", 0) + 1
+    current_phase = session.get("current_phase", 0)
+
+    # Update session
+    session["last_activity"] = now
+    session["turn_count"] = turn_count
+    _write_json(session_file, session)
+
+    # Update heartbeat
+    heartbeat = {
+        "slug": slug,
+        "last_action": now,
+        "turn_count": turn_count,
+        "current_phase": current_phase,
+        "status": "alive",
+        "next_action": "checkpoint saved",
+    }
+    _write_json(sdir / "heartbeat.json", heartbeat)
+
+    # Determine next checkpoint number
+    checkpoints = get_checkpoints(sdir)
+    n = (checkpoints[-1][0] + 1) if checkpoints else 1
+
+    # Build checkpoint
+    checkpoint = {
+        "slug": slug,
+        "phase": current_phase,
+        "turn_count": turn_count,
+        "timestamp": now,
+        "context_hash": context_hash,
+        "version": SCHEMA_VERSION,
+    }
+    _write_json(sdir / f"checkpoint-{n}.json", checkpoint)
+
+    print(f"Checkpoint {n} saved for {slug}")
+
+
+def cmd_status(slug: str) -> None:
+    """Print human-readable session status."""
+    sdir = get_slug_dir(slug)
+    if not sdir.exists():
+        print(f"No session found for {slug}")
+        return
+
+    print(f"=== Session: {slug} ===\n")
+
+    session_file = sdir / "session.json"
+    if session_file.exists():
+        session = _read_json(session_file)
+        print(f"Status:        {session.get('status', 'unknown')}")
+        print(f"Started:       {session.get('start_time', 'unknown')}")
+        print(f"Last Activity: {session.get('last_activity', 'unknown')}")
+        gates = session.get("gate_history", [])
+        print(f"Gates Passed:  {len(gates)}")
+        print(f"Turn Count:    {session.get('turn_count', 0)}")
+        print(f"Phase:         {session.get('current_phase', 0)}")
+    else:
+        print("No session.json found")
+
+    hb_file = sdir / "heartbeat.json"
+    if hb_file.exists():
+        hb = _read_json(hb_file)
+        print(f"Agent Status:  {hb.get('status', 'unknown')}")
+        print(f"Next Action:   {hb.get('next_action', 'unknown')}")
+
+    checkpoints = get_checkpoints(sdir)
+    print(f"\nCheckpoints:   {len(checkpoints)}")
+    for n, _ in checkpoints[-5:]:  # show last 5
+        print(f"  checkpoint-{n}.json")
+
+
+def cmd_resume(slug: str) -> None:
+    """Print the latest checkpoint as JSON (for programmatic consumption)."""
+    sdir = get_slug_dir(slug)
+    checkpoints = get_checkpoints(sdir)
+    if not checkpoints:
+        print(f"No checkpoints found for {slug}")
+        return
+
+    _, path = checkpoints[-1]
+    cp = _read_json(path)
+    print(json.dumps(cp, indent=2))
+
+
+def cmd_list(slug: str) -> None:
+    """List all checkpoints for *slug*."""
+    sdir = get_slug_dir(slug)
+    checkpoints = get_checkpoints(sdir)
+    if not checkpoints:
+        print(f"No checkpoints found for {slug}")
+        return
+
+    print(f"Checkpoints for {slug}:")
+    for n, path in checkpoints:
+        cp = _read_json(path)
+        ts = cp.get("timestamp", "unknown")
+        phase = cp.get("phase", "?")
+        turns = cp.get("turn_count", "?")
+        print(f"  [{n}] phase={phase} turns={turns} @ {ts}")
+
+
+def cmd_health(slug: str) -> None:
+    """Validate session consistency."""
+    sdir = get_slug_dir(slug)
+    issues = []
+
+    if not sdir.exists():
+        print(f"❌ Session not found: {slug}")
+        return
+
+    session: dict = {}
+    hb: dict = {}
+
+    # Check session.json
+    session_file = sdir / "session.json"
+    if not session_file.exists():
+        issues.append("Missing session.json")
+    else:
+        try:
+            session = _read_json(session_file)
+            required = ["task_id", "status", "start_time", "last_activity"]
+            for field in required:
+                if field not in session:
+                    issues.append(f"session.json missing field: {field}")
+        except (json.JSONDecodeError, ValueError):
+            issues.append("session.json is corrupted (invalid JSON)")
+
+    # Check heartbeat.json
+    hb_file = sdir / "heartbeat.json"
+    if not hb_file.exists():
+        issues.append("Missing heartbeat.json")
+    else:
+        try:
+            hb = _read_json(hb_file)
+            if hb.get("status") == "stalled":
+                issues.append("Session is marked as STALLED")
+        except (json.JSONDecodeError, ValueError):
+            issues.append("heartbeat.json is corrupted (invalid JSON)")
+
+    # Check checkpoint integrity
+    checkpoints = get_checkpoints(sdir)
+    if checkpoints:
+        for n, path in checkpoints:
+            try:
+                cp = _read_json(path)
+                if cp.get("version", 1) > SCHEMA_VERSION:
+                    issues.append(f"checkpoint-{n}.json has newer schema version")
+                if "slug" not in cp or "timestamp" not in cp:
+                    issues.append(f"checkpoint-{n}.json missing required fields")
+            except (json.JSONDecodeError, ValueError):
+                issues.append(f"checkpoint-{n}.json is corrupted")
+
+        # Check sequential numbering
+        numbers = [n for n, _ in checkpoints]
+        expected = list(range(numbers[0], numbers[-1] + 1))
+        if numbers != expected:
+            missing = set(expected) - set(numbers)
+            issues.append(f"Missing checkpoints: {sorted(missing)}")
+
+    # Check for stale activity
+    if session_file.exists() and hb_file.exists() and session:
+        try:
+            last_action = session.get("last_activity", "")
+            if last_action:
+                last_time = datetime.fromisoformat(last_action)
+                if datetime.now(UTC) - last_time > STALE_THRESHOLD:
+                    issues.append(f"No activity for > {STALE_THRESHOLD.total_seconds() / 3600:.0f}h (stale)")
+        except (ValueError, TypeError):
+            issues.append("Could not parse last_activity timestamp")
+
+    # Report
+    if not issues:
+        print(f"✅ Session '{slug}' is healthy")
+        print(f"   Checkpoints: {len(checkpoints)}, Status: {session.get('status', 'unknown')}")
+    else:
+        print(f"⚠️  Session '{slug}' has {len(issues)} issue(s):")
+        for issue in issues:
+            print(f"   - {issue}")
+
+
+def cmd_archive(slug: str) -> None:
+    """Move session from deepwork/<slug>/ to deepwork/archive/<slug>/."""
+    sdir = get_slug_dir(slug)
+    if not sdir.exists():
+        print(f"Session not found: {slug}")
+        return
+
+    archive_dir = ARCHIVEDIR / slug
+    if archive_dir.exists():
+        print(f"Session '{slug}' already exists in archive. Remove it first or use a different slug.")
+        return
+
+    archive_dir.parent.mkdir(parents=True, exist_ok=True)
+    shutil.move(str(sdir), str(archive_dir))
+    print(f"📦 Session '{slug}' archived to .pantheon/deepwork/archive/{slug}/")
+
+
+def cmd_cleanup(dry_run: bool = False) -> None:
+    """Clean orphaned sessions and temp files.
+
+    Scans deepwork/ for:
+    - Empty directories (no session.json)
+    - Sessions with stale heartbeats (> 24h no activity)
+    - Temp files (.tmp left from atomic writes)
+    """
+    if not DEEPDIR.exists():
+        print("No deepwork directory found.")
+        return
+
+    now = datetime.now(UTC)
+    removed_dirs = 0
+    removed_files = 0
+
+    for item in sorted(DEEPDIR.iterdir()):
+        if not item.is_dir() or item.name == "archive" or item.name.startswith("."):
+            continue
+
+        session_file = item / "session.json"
+        hb_file = item / "heartbeat.json"
+
+        # Check if it's an orphan (no session.json)
+        if not session_file.exists():
+            if dry_run:
+                print(f"  [dry-run] Would remove orphan directory: {item.name}/")
+            else:
+                shutil.rmtree(item)
+                removed_dirs += 1
+                print(f"  Removed orphan directory: {item.name}/")
+            continue
+
+        # Check for stale sessions
+        if hb_file.exists():
+            try:
+                hb = _read_json(hb_file)
+                last_action = hb.get("last_action", "")
+                if last_action:
+                    last_time = datetime.fromisoformat(last_action)
+                    if now - last_time > STALE_THRESHOLD:
+                        if dry_run:
+                            print(f"  [dry-run] Would flag stale session: {item.name}/ (last action: {last_action})")
+                        else:
+                            print(f"  ⏸️  Session '{item.name}' stale since {last_action}")
+            except (ValueError, json.JSONDecodeError):
+                pass
+
+        # Clean temp files
+        for tmp_file in item.glob("*.tmp"):
+            if dry_run:
+                print(f"  [dry-run] Would remove temp file: {tmp_file.name}")
+            else:
+                tmp_file.unlink()
+                removed_files += 1
+                print(f"  Removed temp file: {item.name}/{tmp_file.name}")
+
+    if not dry_run:
+        total = removed_dirs + removed_files
+        if total == 0:
+            print("✅ Nothing to clean.")
+        else:
+            print(f"✅ Cleaned {removed_dirs} dir(s) and {removed_files} file(s).")
+
+
+# ---------------------------------------------------------------------------
+# Internal helpers
+# ---------------------------------------------------------------------------
+
+
+def _write_json(path: Path, data: dict) -> None:
+    """Atomically write *data* to *path* as JSON."""
+    tmp = path.with_suffix(".tmp")
+    tmp.write_text(json.dumps(data, indent=2, ensure_ascii=False))
+    tmp.replace(path)
+
+
+def _read_json(path: Path) -> dict:
+    """Read and return JSON content from *path*."""
+    return json.loads(path.read_text(encoding="utf-8"))
+
+
+def _compute_context_hash(sdir: Path) -> str:
+    """Return a short SHA-256 hex digest of STATUS.md (if it exists)."""
+    status_file = sdir / "STATUS.md"
+    if status_file.exists():
+        return hashlib.sha256(status_file.read_bytes()).hexdigest()[:8]
+    return ""
+
+
+# ---------------------------------------------------------------------------
+# CLI entry-point
+# ---------------------------------------------------------------------------
+
+COMMANDS = {
+    "init": cmd_init,
+    "save": cmd_save,
+    "status": cmd_status,
+    "resume": cmd_resume,
+    "list": cmd_list,
+    "health": cmd_health,
+    "archive": cmd_archive,
+    "cleanup": cmd_cleanup,
+}
+
+
+def main(argv: list[str] | None = None) -> None:
+    """Parse CLI arguments and dispatch the requested command."""
+    if argv is None:
+        argv = sys.argv[1:]
+
+    if len(argv) < 1:
+        print(
+            "Usage: python checkpoint_session.py <command> [slug] [options]\n"
+            f"Commands: {', '.join(sorted(COMMANDS))}\n"
+            "Note: 'cleanup' does not require a slug (use --dry-run for preview).",
+            file=sys.stderr,
+        )
+        sys.exit(1)
+
+    command = argv[0]
+
+    # Special handling for cleanup (no slug required)
+    if command == "cleanup":
+        dry_run = "--dry-run" in argv[1:]
+        cmd_cleanup(dry_run=dry_run)
+        return
+
+    # All other commands require a slug
+    if len(argv) < 2:  # noqa: PLR2004
+        print(f"Usage: python checkpoint_session.py {command} <slug>", file=sys.stderr)
+        sys.exit(1)
+
+    slug = argv[1]
+
+    if command not in COMMANDS:
+        print(
+            f"Unknown command: {command!r}. Available: {', '.join(sorted(COMMANDS))}",
+            file=sys.stderr,
+        )
+        sys.exit(1)
+
+    COMMANDS[command](slug)
+
+
+if __name__ == "__main__":
+    main()