opencode-autoresearch 3.6.0 → 3.7.0

package/dist/run-manager.js

@@ -1,52 +1,107 @@
-import { utcNow, ensureParent, atomicWriteJson, readJsonFile, parseRunState, resolvePath, normalizeDirection, parseDurationSeconds, normalizeLabels, missingRequiredLabels, AutoresearchError, } from "./helpers.js";
-import { RESULTS_DEFAULT, STATE_DEFAULT } from "./constants.js";
-import { buildSubagentPoolPlan, buildContinuationPolicy } from "./subagent-pool.js";
+import { utcNow, ensureParent, atomicWriteJson, readJsonFile, parseRunState, resolvePath, normalizeDirection, normalizeOperatingMode, normalizeScorerStatus, parseDurationSeconds, normalizeLabels, missingRequiredLabels, writeGoalDoc, AutoresearchError, } from "./helpers.js";
+import { RESULTS_DEFAULT, STATE_DEFAULT, SCORE_HISTORY_DEFAULT, GOAL_DEFAULT } from "./constants.js";
+import { buildSubagentPoolPlan, buildContinuationPolicy, buildDraftPoolPlan } from "./subagent-pool.js";
 import { writeFileSync, appendFileSync, existsSync, constants } from "fs";
 import { lstat, open } from "fs/promises";
 const MAX_RESULTS_BYTES = 10 * 1024 * 1024;
-export async function initializeRun(repo, resultsPathValue, statePathValue, config, freshStart) {
+export async function initializeRun(repo, resultsPathValue, statePathValue, config, freshStart, goalPathValue) {
     const resultsPath = resolvePath(repo, resultsPathValue, RESULTS_DEFAULT);
     const statePath = resolvePath(repo, statePathValue, STATE_DEFAULT);
+    const goalPath = resolvePath(repo, goalPathValue, GOAL_DEFAULT);
     if (existsSync(statePath) && !freshStart) {
         throw new AutoresearchError(`${statePath} already exists. Use --fresh-start to archive.`);
     }
-    const header = "timestamp\titeration\tdecision\tmetric_value\tverify_status\tguard_status\thypothesis\tchange_summary\tlabels\tnote\n";
+    const header = "timestamp\titeration\tdecision\tmetric_value\tinstrument_value\tverify_status\tguard_status\thypothesis\tchange_summary\tlabels\tnote\tid\tparent_id\tbranch\tstage\tagent\n";
     ensureParent(resultsPath);
     if (!existsSync(resultsPath)) {
         writeFileSync(resultsPath, header, "utf-8");
     }
     const state = makeStatePayload(config, resultsPath, statePath);
     atomicWriteJson(statePath, state);
+    writeGoalDoc(goalPath, {
+        goal: config.goal,
+        metric: config.outcome_metric ?? config.metric,
+        direction: config.outcome_direction ?? config.direction ?? "lower",
+        verify: config.verify ?? "",
+        guard: config.guard,
+        constraints: undefined,
+        file_map: config.scope || undefined,
+        stop_conditions: config.stop_condition,
+    });
     return state;
 }
-export async function appendIteration(repo, resultsPathValue, statePathValue, decision, metricValue, verifyStatus, guardStatus, hypothesis, changeSummary, labels, note, iteration) {
+export async function appendIteration(repo, resultsPathValue, statePathValue, decision, metricValue, instrumentValue, verifyStatus, guardStatus, hypothesis, changeSummary, labels, note, iteration, scoreHistoryPathValue, scorerStatusOrScoreComponents, scoreComponentsValue, lineage) {
     const resultsPath = resolvePath(repo, resultsPathValue, RESULTS_DEFAULT);
     const statePath = resolvePath(repo, statePathValue, STATE_DEFAULT);
+    const scoreHistoryPath = resolvePath(repo, scoreHistoryPathValue, SCORE_HISTORY_DEFAULT);
     const state = parseRunState(readJsonFile(statePath));
     const currentIteration = iteration ?? state.stats.total_iterations + 1;
     const now = utcNow();
+    const scorerStatusValue = typeof scorerStatusOrScoreComponents === "string" ? scorerStatusOrScoreComponents : undefined;
+    const inferredLineage = lineage
+        ?? (isExperimentLineage(scorerStatusOrScoreComponents) ? scorerStatusOrScoreComponents : undefined)
+        ?? (isExperimentLineage(scoreComponentsValue) ? scoreComponentsValue : undefined);
+    const scoreComponents = typeof scorerStatusOrScoreComponents === "object" && !isExperimentLineage(scorerStatusOrScoreComponents)
+        ? scorerStatusOrScoreComponents
+        : isExperimentLineage(scoreComponentsValue) ? undefined : scoreComponentsValue;
+    const scorerStatus = normalizeScorerStatus(scorerStatusValue);
+    const effectiveDecision = scorerStatus === "scorer-broken" && (decision === "keep" || decision === "discard")
+        ? "needs_human"
+        : decision;
     const labelList = normalizeLabels(labels ?? []);
     const labelReqs = state.label_requirements ?? { keep: [], stop: [] };
     const requiredKeep = normalizeLabels(labelReqs.keep ?? []);
     const requiredStop = normalizeLabels(labelReqs.stop ?? []);
     const missingKeep = missingRequiredLabels(labelList, requiredKeep);
     const missingStop = missingRequiredLabels(labelList, requiredStop);
-    if (decision === "keep" && missingKeep.length > 0) {
+    if (effectiveDecision === "keep" && missingKeep.length > 0) {
         throw new AutoresearchError(`Keep requires labels: ${missingKeep.join(", ")}`);
     }
+    const lineageId = inferredLineage?.id ?? `${state.run_id}-iter-${currentIteration}`;
+    const lineageParentId = inferredLineage?.parent_id ?? (currentIteration > 1 ? `${state.run_id}-iter-${currentIteration - 1}` : "");
+    const lineageBranch = inferredLineage?.branch ?? state.draft_pool?.best_branch_id ?? "main";
+    const lineageStage = inferredLineage?.stage ?? "experiment";
+    const lineageAgent = inferredLineage?.agent ?? "orchestrator";
     const resultRow = [
         now,
         String(currentIteration),
         decision,
         metricValue ?? "",
+        instrumentValue ?? "",
         verifyStatus,
         guardStatus,
         hypothesis ?? "",
         changeSummary,
         labelList.join(","),
         note ?? "",
+        lineageId,
+        lineageParentId,
+        lineageBranch,
+        lineageStage,
+        lineageAgent,
     ].join("\t") + "\n";
     appendFileSync(resultsPath, resultRow, "utf-8");
+    const scoreRecord = {
+        timestamp: now,
+        iteration: currentIteration,
+        run_id: state.run_id,
+        decision: effectiveDecision,
+        scorer_status: scorerStatus,
+        metric_value: metricValue ?? null,
+        metric_name: state.metric.name,
+        metric_direction: state.metric.direction,
+        verify_status: verifyStatus,
+        guard_status: guardStatus,
+        id: lineageId,
+        parent_id: lineageParentId,
+        branch: lineageBranch,
+        stage: lineageStage,
+        agent: lineageAgent,
+    };
+    if (scoreComponents != null) {
+        scoreRecord.score_components = scoreComponents;
+    }
+    await appendTextFileNoFollow(scoreHistoryPath, JSON.stringify(scoreRecord) + "\n", "score history file");
     const newState = {
         ...state,
         updated_at: now,
@@ -57,26 +112,28 @@ export async function appendIteration(repo, resultsPathValue, statePathValue, de
         },
         flags: {
             ...state.flags,
-            stop_ready: decision === "keep" && missingStop.length === 0,
+            stop_ready: effectiveDecision === "keep" && missingStop.length === 0,
         },
     };
-    if (decision === "keep") {
+    if (effectiveDecision === "keep") {
         newState.stats.kept = newState.stats.kept + 1;
         newState.stats.consecutive_discards = 0;
     }
-    else if (decision === "discard") {
+    else if (effectiveDecision === "discard") {
         newState.stats.discarded = newState.stats.discarded + 1;
         newState.stats.consecutive_discards = newState.stats.consecutive_discards + 1;
     }
-    else if (decision === "needs_human") {
+    else if (effectiveDecision === "needs_human") {
         newState.stats.needs_human = newState.stats.needs_human + 1;
         newState.flags.needs_human = true;
         newState.stats.consecutive_discards = 0;
     }
     newState.last_iteration = {
         iteration: currentIteration,
-        decision,
+        decision: effectiveDecision,
+        scorer_status: scorerStatus,
         metric_value: metricValue,
+        instrument_value: instrumentValue,
         change_summary: changeSummary,
         labels: labelList,
         timestamp: now,
@@ -84,10 +141,66 @@ export async function appendIteration(repo, resultsPathValue, statePathValue, de
         stop_labels_satisfied: missingStop.length === 0,
         missing_keep_labels: missingKeep,
         missing_stop_labels: missingStop,
+        id: lineageId,
+        parent_id: lineageParentId,
+        branch: lineageBranch,
+        stage: lineageStage,
+        agent: lineageAgent,
     };
+    if (scoreComponents != null) {
+        newState.last_iteration.score_components = scoreComponents;
+    }
     atomicWriteJson(statePath, newState);
     return newState;
 }
+function isExperimentLineage(value) {
+    if (value === null || typeof value !== "object" || Array.isArray(value))
+        return false;
+    return ["id", "parent_id", "branch", "stage", "agent"].some((key) => key in value);
+}
+async function appendTextFileNoFollow(filePath, content, description) {
+    ensureParent(filePath);
+    try {
+        const pathStats = await lstat(filePath);
+        if (pathStats.isSymbolicLink()) {
+            throw new AutoresearchError(`Refusing to append to symlinked ${description}; Refusing to write symlinked ${description}: ${filePath}`);
+        }
+        if (!pathStats.isFile()) {
+            throw new AutoresearchError(`Refusing to append to non-regular ${description}: ${filePath}`);
+        }
+    }
+    catch (err) {
+        if (err instanceof AutoresearchError)
+            throw err;
+        const code = err.code;
+        if (code !== "ENOENT")
+            throw err;
+    }
+    if (typeof constants.O_NOFOLLOW !== "number") {
+        throw new AutoresearchError(`Refusing to append to ${description} because this platform does not support O_NOFOLLOW: ${filePath}`);
+    }
+    let handle;
+    try {
+        handle = await open(filePath, constants.O_WRONLY | constants.O_CREAT | constants.O_APPEND | constants.O_NOFOLLOW, 0o600);
+    }
+    catch (err) {
+        const code = err.code;
+        if (code === "ELOOP") {
+            throw new AutoresearchError(`Refusing to write symlinked ${description}: ${filePath}`);
+        }
+        throw err;
+    }
+    try {
+        const stats = await handle.stat();
+        if (!stats.isFile()) {
+            throw new AutoresearchError(`Refusing to append to non-regular ${description}: ${filePath}`);
+        }
+        await handle.writeFile(content, "utf-8");
+    }
+    finally {
+        await handle.close();
+    }
+}
 export function makeStatePayload(config, resultsPath, statePath) {
     const now = utcNow();
     const durationSeconds = parseDurationSeconds(config.duration);
@@ -100,24 +213,42 @@ export function makeStatePayload(config, resultsPath, statePath) {
         mode: config.mode,
     });
     const continuationPolicy = buildContinuationPolicy(config.mode);
+    const draftPool = (config.num_drafts ?? 1) > 1
+        ? buildDraftPoolPlan({
+            num_drafts: config.num_drafts ?? 1,
+            branch_selection_policy: config.branch_selection_policy ?? "best",
+            baseline_iteration: 0,
+        })
+        : undefined;
+    const runId = config.run_tag ?? `run-${Date.now().toString(36)}`;
     return {
         schema_version: 1,
-        run_id: config.run_tag ?? `run-${Date.now().toString(36)}`,
+        run_id: runId,
         created_at: now,
         updated_at: now,
         status: "initialized",
         mode: config.mode,
+        operating_mode: normalizeOperatingMode(config.operating_mode),
         goal: config.goal,
         scope: config.scope ?? "current repository",
         metric: {
-            name: config.metric,
-            direction: normalizeDirection(config.direction),
+            name: config.outcome_metric ?? config.metric,
+            direction: normalizeDirection(config.outcome_direction ?? config.direction),
             baseline: config.baseline,
             best: config.baseline,
             latest: config.baseline,
         },
+        instrument_metric: config.instrument_metric ? {
+            name: config.instrument_metric,
+            direction: normalizeDirection(config.instrument_direction ?? config.direction),
+            baseline: config.baseline,
+            best: config.baseline,
+            latest: config.baseline,
+        } : undefined,
         verify: config.verify,
         guard: config.guard,
+        scorer: config.scorer,
+        max_no_progress: config.max_no_progress,
         iterations_cap: config.iterations,
         duration: config.duration,
         duration_seconds: durationSeconds ?? undefined,
@@ -147,6 +278,14 @@ export function makeStatePayload(config, resultsPath, statePath) {
         },
         subagent_pool: subagentPool,
         continuation_policy: continuationPolicy,
+        draft_pool: draftPool,
+        lineage: {
+            id: `exp-${runId}`,
+            parent_id: null,
+            branch: "main",
+            stage: "experiment",
+            agent: "orchestrator",
+        },
     };
 }
 export async function setStopRequested(repo, statePathValue) {
@@ -260,6 +399,10 @@ export async function buildSupervisorSnapshot(repo, resultsPathValue, statePathV
         decision = "stop";
         reason = "iteration_cap_reached";
     }
+    else if (state.max_no_progress != null && state.stats.consecutive_discards >= state.max_no_progress) {
+        decision = "stop";
+        reason = "no_progress";
+    }
     else if (state.status === "completed" || state.status === "stopped") {
         decision = "stop";
         reason = `state_${state.status}`;
@@ -270,14 +413,66 @@ export async function buildSupervisorSnapshot(repo, resultsPathValue, statePathV
         run_id: state.run_id,
         status: state.status,
         mode: state.mode,
+        operating_mode: state.operating_mode,
         goal: state.goal,
         metric: state.metric,
+        instrument_metric: state.instrument_metric,
         stats: state.stats,
         last_iteration: state.last_iteration,
         results_rows: resultsRows,
         artifact_paths: state.artifact_paths,
         flags: state.flags,
         label_requirements: state.label_requirements,
+        subagent_pool: state.subagent_pool,
+        continuation_policy: state.continuation_policy,
+        draft_pool: state.draft_pool,
+    };
+}
+export function parseResultRow(line) {
+    if (!line.trim())
+        return null;
+    const parts = line.split("\t");
+    if (parts.length < 11)
+        return null;
+    if (parts.length === 11) {
+        return {
+            timestamp: parts[0],
+            iteration: parseInt(parts[1], 10),
+            decision: parts[2],
+            metric_value: parts[3],
+            instrument_value: parts[4],
+            verify_status: parts[5],
+            guard_status: parts[6],
+            hypothesis: parts[7],
+            change_summary: parts[8],
+            labels: parts[9],
+            note: parts[10],
+            id: "",
+            parent_id: "",
+            branch: "main",
+            stage: "",
+            agent: "",
+        };
+    }
+    if (parts.length < 16)
+        return null;
+    return {
+        timestamp: parts[0],
+        iteration: parseInt(parts[1], 10),
+        decision: parts[2],
+        metric_value: parts[3],
+        instrument_value: parts[4],
+        verify_status: parts[5],
+        guard_status: parts[6],
+        hypothesis: parts[7],
+        change_summary: parts[8],
+        labels: parts[9],
+        note: parts[10],
+        id: parts[11],
+        parent_id: parts[12],
+        branch: parts[13],
+        stage: parts[14],
+        agent: parts[15],
     };
 }
 //# sourceMappingURL=run-manager.js.map

package/dist/run-manager.js.map

@@ -1 +1 @@
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package/dist/score-parser.d.ts

@@ -0,0 +1,56 @@
+/**
+ * Represents the standardized score contract
+ */
+export interface ScoreOutput {
+    /** The current score value (required) */
+    score: number;
+    /** The maximum possible score (required) */
+    max: number;
+    /** Optional component breakdown */
+    components?: Record<string, number>;
+    /** Optional diagnostic information */
+    diagnostics?: Record<string, unknown>;
+    /** Optional additional details */
+    details?: Record<string, unknown>;
+}
+/**
+ * Parses and validates score script output according to the standardized contract
+ * @param output - Raw string output from a score script
+ * @returns Parsed and validated ScoreOutput object
+ * @throws AutoresearchError if the output is invalid
+ */
+export declare function parseScoreOutput(output: string): ScoreOutput;
+/**
+ * A ranked component entry showing its name and net delta across a run.
+ */
+export interface ComponentDelta {
+    /** Component name */
+    name: string;
+    /** Net change: last observed value minus first observed value */
+    delta: number;
+}
+/**
+ * Result of ranking components for a run.
+ */
+export interface ComponentRanking {
+    /** Components with the most negative delta (largest decreases), sorted ascending by delta value (most negative first) */
+    top_negative: ComponentDelta[];
+    /** Components with the most positive delta (largest increases), sorted descending by delta value (most positive first) */
+    top_positive: ComponentDelta[];
+}
+/**
+ * Ranks score components across a sequence of score history records by their
+ * net change from first to last observed value.
+ *
+ * Records without a `score_components` field are skipped. The function returns
+ * the `topN` largest positive and negative deltas.
+ *
+ * @param records - Array of score history records, each optionally containing
+ *   a `score_components` map.
+ * @param topN - Maximum number of entries in each ranking list (default: 5).
+ * @returns ComponentRanking with top_negative and top_positive lists.
+ */
+export declare function rankComponents(records: Array<{
+    score_components?: Record<string, number>;
+}>, topN?: number): ComponentRanking;
+//# sourceMappingURL=score-parser.d.ts.map

package/dist/score-parser.d.ts.map

@@ -0,0 +1 @@
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package/dist/score-parser.js

@@ -0,0 +1,109 @@
+import { AutoresearchError } from "./helpers.js";
+/**
+ * Parses and validates score script output according to the standardized contract
+ * @param output - Raw string output from a score script
+ * @returns Parsed and validated ScoreOutput object
+ * @throws AutoresearchError if the output is invalid
+ */
+export function parseScoreOutput(output) {
+    if (typeof output !== 'string') {
+        throw new AutoresearchError("Score output must be a non-empty string");
+    }
+    const trimmedOutput = output.trim();
+    if (!trimmedOutput) {
+        throw new AutoresearchError("Score output must be a non-empty string");
+    }
+    let parsed;
+    try {
+        parsed = JSON.parse(trimmedOutput);
+    }
+    catch (error) {
+        const message = error instanceof Error ? error.message : String(error);
+        throw new AutoresearchError(`Invalid JSON in score output: ${message}`);
+    }
+    // Validate that we have an object
+    if (parsed === null || typeof parsed !== 'object' || Array.isArray(parsed)) {
+        throw new AutoresearchError("Score output must be a JSON object");
+    }
+    const obj = parsed;
+    // Validate required 'score' field
+    if (!('score' in obj) || typeof obj.score !== 'number' || !isFinite(obj.score)) {
+        throw new AutoresearchError("Score output must contain a numeric 'score' field");
+    }
+    // Validate required 'max' field
+    if (!('max' in obj) || typeof obj.max !== 'number' || !isFinite(obj.max) || obj.max <= 0) {
+        throw new AutoresearchError("Score output must contain a positive numeric 'max' field");
+    }
+    // Validate optional 'components' field if present
+    if ('components' in obj && obj.components !== undefined) {
+        if (obj.components === null || typeof obj.components !== 'object' || Array.isArray(obj.components)) {
+            throw new AutoresearchError("Score output 'components' field must be an object if present");
+        }
+        // Validate that all component values are numbers
+        const components = obj.components;
+        for (const [key, value] of Object.entries(components)) {
+            if (typeof value !== 'number' || !isFinite(value)) {
+                throw new AutoresearchError(`Score output components.${key} must be a number`);
+            }
+        }
+    }
+    // Validate optional 'diagnostics' field if present
+    if ('diagnostics' in obj && obj.diagnostics !== undefined) {
+        if (obj.diagnostics === null || typeof obj.diagnostics !== 'object' || Array.isArray(obj.diagnostics)) {
+            throw new AutoresearchError("Score output 'diagnostics' field must be an object if present");
+        }
+    }
+    // Validate optional 'details' field if present
+    if ('details' in obj && obj.details !== undefined) {
+        if (obj.details === null || typeof obj.details !== 'object' || Array.isArray(obj.details)) {
+            throw new AutoresearchError("Score output 'details' field must be an object if present");
+        }
+    }
+    // Return the validated object with proper typing
+    return {
+        score: obj.score,
+        max: obj.max,
+        components: obj.components,
+        diagnostics: obj.diagnostics,
+        details: obj.details
+    };
+}
+/**
+ * Ranks score components across a sequence of score history records by their
+ * net change from first to last observed value.
+ *
+ * Records without a `score_components` field are skipped. The function returns
+ * the `topN` largest positive and negative deltas.
+ *
+ * @param records - Array of score history records, each optionally containing
+ *   a `score_components` map.
+ * @param topN - Maximum number of entries in each ranking list (default: 5).
+ * @returns ComponentRanking with top_negative and top_positive lists.
+ */
+export function rankComponents(records, topN = 5) {
+    const first = {};
+    const last = {};
+    for (const rec of records) {
+        if (rec.score_components == null)
+            continue;
+        for (const [name, value] of Object.entries(rec.score_components)) {
+            if (!(name in first))
+                first[name] = value;
+            last[name] = value;
+        }
+    }
+    const deltas = Object.keys(first).map((name) => ({
+        name,
+        delta: (last[name] ?? first[name]) - first[name],
+    }));
+    const positive = deltas
+        .filter((d) => d.delta > 0)
+        .sort((a, b) => b.delta - a.delta)
+        .slice(0, topN);
+    const negative = deltas
+        .filter((d) => d.delta < 0)
+        .sort((a, b) => a.delta - b.delta)
+        .slice(0, topN);
+    return { top_negative: negative, top_positive: positive };
+}
+//# sourceMappingURL=score-parser.js.map

package/dist/score-parser.js.map

@@ -0,0 +1 @@
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package/dist/subagent-pool.d.ts

@@ -1,3 +1,4 @@
+import type { DraftBranch, DraftPoolConfig } from "./types.js";
 export interface RoleTemplate {
     id: string;
     name: string;
@@ -10,4 +11,11 @@ export declare function buildSubagentPoolPlan(params: {
     mode: string;
 }): Record<string, unknown>;
 export declare function buildContinuationPolicy(mode: string): Record<string, unknown>;
+export interface DraftPoolConfigInput {
+    num_drafts: number;
+    branch_selection_policy: "best" | "roulette" | "diverse";
+    baseline_iteration?: number;
+}
+export declare function buildDraftPoolPlan(input: DraftPoolConfigInput): DraftPoolConfig;
+export declare function selectNextBranch(activeDrafts: DraftBranch[], policy: "best" | "roulette" | "diverse", direction: "lower" | "higher"): string | undefined;
 //# sourceMappingURL=subagent-pool.d.ts.map

package/dist/subagent-pool.d.ts.map

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