oncoprintjs 6.0.8 → 6.1.2

package/dist/js/bucketsort.d.ts

@@ -1,6 +1,6 @@
-export declare type SortingVector = (number | string)[];
-declare type CompareEquals<T> = (a: T, b: T) => number;
-declare type GetVector<T> = (t: T) => SortingVector;
+export type SortingVector = (number | string)[];
+type CompareEquals<T> = (a: T, b: T) => number;
+type GetVector<T> = (t: T) => SortingVector;
 export declare function bucketSort<T>(array: T[], getVector?: (t: T) => SortingVector, compareEquals?: CompareEquals<T>): T[];
 export declare function stringSort<T>(array: T[], getString?: (t: T) => string): T[];
 export declare function stringToVector(string: string): number[];

package/dist/js/oncoprint.d.ts

@@ -1,4 +1,5 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import './polyfill';
 import OncoprintModel, { ColumnId, ColumnLabel, ColumnProp, CustomTrackOption, Datum, GAP_MODE_ENUM, SortConfig, TrackGroupHeader, TrackGroupIndex, TrackId, TrackSortDirection, TrackSortSpecification, TrackTooltipFn, UserTrackSpec } from './oncoprintmodel';
@@ -10,7 +11,7 @@ import OncoprintLegendView from './oncoprintlegendrenderer';
 import OncoprintTrackInfoView from './oncoprinttrackinfoview';
 import OncoprintMinimapView, { MinimapViewportSpec } from './oncoprintminimapview';
 import OncoprintHeaderView from './oncoprintheaderview';
-export declare type InitParams = {
+export type InitParams = {
     init_cell_width?: number;
     init_cell_padding?: number;
     cell_padding_off_cell_width_threshold?: number;
@@ -20,11 +21,11 @@ export declare type InitParams = {
     init_cell_padding_on?: boolean;
     max_height?: number;
 };
-export declare type HorzZoomCallback = (zoom: number) => void;
-export declare type MinimapCloseCallback = () => void;
-export declare type CellMouseOverCallback = (uid: ColumnId | null, track_id?: TrackId) => void;
-export declare type CellClickCallback = (uid: ColumnId | null, track_id?: TrackId) => void;
-export declare type ClipboardChangeCallback = (ids: ColumnId[]) => void;
+export type HorzZoomCallback = (zoom: number) => void;
+export type MinimapCloseCallback = () => void;
+export type CellMouseOverCallback = (uid: ColumnId | null, track_id?: TrackId) => void;
+export type CellClickCallback = (uid: ColumnId | null, track_id?: TrackId) => void;
+export type ClipboardChangeCallback = (ids: ColumnId[]) => void;
 export default class Oncoprint {
     private ctr_selector;
     private width;

package/dist/js/oncoprintheaderview.d.ts

@@ -1,4 +1,5 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import OncoprintModel from './oncoprintmodel';
 export declare const CLOSE_MENUS_EVENT = "oncoprint-header-view.do-close-menus";

package/dist/js/oncoprintlabelview.d.ts

@@ -1,4 +1,5 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import OncoprintModel, { TrackId } from './oncoprintmodel';
 import OncoprintToolTip from './oncoprinttooltip';

package/dist/js/oncoprintlegendrenderer.d.ts

@@ -1,4 +1,5 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import OncoprintModel from './oncoprintmodel';
 export default class OncoprintLegendView {

package/dist/js/oncoprintminimapview.d.ts

@@ -1,8 +1,9 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import OncoprintModel, { ColumnIndex } from './oncoprintmodel';
 import OncoprintWebGLCellView from './oncoprintwebglcellview';
-export declare type MinimapViewportSpec = {
+export type MinimapViewportSpec = {
     left_col: ColumnIndex;
     right_col: ColumnIndex;
     scroll_y_proportion: number;

package/dist/js/oncoprintmodel.d.ts

@@ -1,4 +1,5 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import CachedProperty from './CachedProperty';
 import { RuleSet, RuleSetParams, RuleWithId } from './oncoprintruleset';
@@ -10,47 +11,47 @@ export declare enum GAP_MODE_ENUM {
     SHOW_GAPS_PERCENT = "SHOW_GAPS_PERCENT",
     HIDE_GAPS = "HIDE_GAPS"
 }
-export declare type ColumnId = string;
-export declare type ColumnIndex = number;
-export declare type TrackId = number;
-export declare type Datum = any;
-export declare type RuleSetId = number;
-export declare type TrackGroupHeader = {
+export type ColumnId = string;
+export type ColumnIndex = number;
+export type TrackId = number;
+export type Datum = any;
+export type RuleSetId = number;
+export type TrackGroupHeader = {
     label: {
         text: string;
     };
     options: CustomTrackGroupOption[];
 };
-export declare type TrackGroup = {
+export type TrackGroup = {
     header?: TrackGroupHeader;
     tracks: TrackId[];
 };
-export declare type TrackGroupIndex = number;
-export declare type TrackSortDirection = 0 | 1 | -1;
-export declare type TrackSortComparator<D> = (d1: D, d2: D) => number;
-export declare type TrackSortVector<D> = (d: D) => (number | string)[];
-export declare type TrackTooltipFn<D> = (cell_data: D[]) => HTMLElement | string | any;
-export declare type TrackSortSpecificationComparators<D> = {
+export type TrackGroupIndex = number;
+export type TrackSortDirection = 0 | 1 | -1;
+export type TrackSortComparator<D> = (d1: D, d2: D) => number;
+export type TrackSortVector<D> = (d: D) => (number | string)[];
+export type TrackTooltipFn<D> = (cell_data: D[]) => HTMLElement | string | any;
+export type TrackSortSpecificationComparators<D> = {
     mandatory: TrackSortComparator<D>;
     preferred: TrackSortComparator<D>;
     isVector?: false;
 };
-export declare type TrackSortSpecificationVectors<D> = {
+export type TrackSortSpecificationVectors<D> = {
     mandatory: TrackSortVector<D>;
     preferred: TrackSortVector<D>;
     isVector: true;
     compareEquals?: TrackSortComparator<D>;
 };
-export declare type TrackSortSpecification<D> = TrackSortSpecificationComparators<D> | TrackSortSpecificationVectors<D>;
-export declare type ActiveRules = {
+export type TrackSortSpecification<D> = TrackSortSpecificationComparators<D> | TrackSortSpecificationVectors<D>;
+export type ActiveRules = {
     [ruleId: number]: boolean;
 };
-export declare type ActiveRulesCount = {
+export type ActiveRulesCount = {
     [ruleId: number]: number;
 };
-export declare type TrackSortDirectionChangeCallback = (track_id: TrackId, dir: number) => void;
-export declare type TrackGapChangeCallBack = (track_id: TrackId, mode: GAP_MODE_ENUM) => void;
-export declare type CustomTrackOption = {
+export type TrackSortDirectionChangeCallback = (track_id: TrackId, dir: number) => void;
+export type TrackGapChangeCallBack = (track_id: TrackId, mode: GAP_MODE_ENUM) => void;
+export type CustomTrackOption = {
     label?: string;
     separator?: boolean;
     onClick?: (id: TrackId) => void;
@@ -58,14 +59,14 @@ export declare type CustomTrackOption = {
     disabled?: boolean;
     gapLabelsFn?: (model: OncoprintModel) => OncoprintGapConfig[];
 };
-export declare type CustomTrackGroupOption = {
+export type CustomTrackGroupOption = {
     label?: string;
     separator?: boolean;
     onClick?: (id: TrackGroupIndex) => void;
     weight?: () => string;
     disabled?: () => boolean;
 };
-export declare type UserTrackSpec<D> = {
+export type UserTrackSpec<D> = {
     target_group?: TrackGroupIndex;
     cell_height?: number;
     track_padding?: number;
@@ -103,17 +104,17 @@ export declare type UserTrackSpec<D> = {
     track_can_show_gaps?: boolean;
     show_gaps_on_init?: boolean;
 };
-export declare type LibraryTrackSpec<D> = UserTrackSpec<D> & {
+export type LibraryTrackSpec<D> = UserTrackSpec<D> & {
     rule_set: RuleSet;
     track_id: TrackId;
 };
-export declare type TrackOverlappingCells = {
+export type TrackOverlappingCells = {
     ids: ColumnId[];
     track: TrackId;
     top: number;
     left: number;
 };
-export declare type SortConfig = {
+export type SortConfig = {
     type: 'alphabetical';
 } | {
     type: 'order';
@@ -125,36 +126,36 @@ export declare type SortConfig = {
 } | {
     type?: '';
 };
-export declare type IdentifiedShapeList = {
+export type IdentifiedShapeList = {
     id: ColumnId;
     shape_list: ComputedShapeParams[];
 };
-export declare type ClusterSortResult = {
+export type ClusterSortResult = {
     track_group_index: TrackGroupIndex;
     track_id_order: TrackId[];
 };
-export declare type ColumnLabel = {
+export type ColumnLabel = {
     left_padding_percent?: number;
     text_color?: string;
     circle_color?: string;
     angle_in_degrees?: number;
     text: string;
 };
-export declare type TrackProp<T> = {
+export type TrackProp<T> = {
     [trackId: number]: T;
 };
-export declare type TrackGroupProp<T> = {
+export type TrackGroupProp<T> = {
     [trackGroupIndex: number]: T;
 };
-export declare type ColumnProp<T> = {
+export type ColumnProp<T> = {
     [columnId: string]: T;
 };
-export declare type ColumnIdSet = {
+export type ColumnIdSet = {
     [columnId: string]: any;
 };
-export declare type OncoprintDataGroupsByTrackId<T> = Record<string, OncoprintDataGroups<T>[]>;
-export declare type OncoprintDataGroups<T> = OncoprintDataGroup<T>[];
-export declare type OncoprintDataGroup<T> = T[];
+export type OncoprintDataGroupsByTrackId<T> = Record<string, OncoprintDataGroups<T>[]>;
+export type OncoprintDataGroups<T> = OncoprintDataGroup<T>[];
+export type OncoprintDataGroup<T> = T[];
 export default class OncoprintModel {
     private sort_config;
     rendering_suppressed_depth: number;
@@ -342,7 +343,7 @@ export default class OncoprintModel {
     getOncoprintHeight(base?: boolean): number;
     getOncoprintWidth(base?: boolean): number;
     showGaps(): boolean;
-    gapMode(): GAP_MODE_ENUM | GAP_MODE_ENUM.HIDE_GAPS;
+    gapMode(): GAP_MODE_ENUM;
     getOncoprintWidthNoColumnPaddingNoGaps(): number;
     getColumnLabels(): ColumnProp<ColumnLabel>;
     setColumnLabels(labels: ColumnProp<ColumnLabel>): void;

package/dist/js/oncoprintruleset.d.ts

@@ -1,7 +1,7 @@
 import { ComputedShapeParams, ShapeParams } from './oncoprintshape';
 import { Omit } from './utils';
 import { ActiveRules, ColumnProp, Datum, RuleSetId } from './oncoprintmodel';
-export declare type RuleSetParams = ILinearInterpRuleSetParams | ICategoricalRuleSetParams | IGradientRuleSetParams | IBarRuleSetParams | IStackedBarRuleSetParams | IGradientAndCategoricalRuleSetParams | IGeneticAlterationRuleSetParams;
+export type RuleSetParams = ILinearInterpRuleSetParams | ICategoricalRuleSetParams | IGradientRuleSetParams | IBarRuleSetParams | IStackedBarRuleSetParams | IGradientAndCategoricalRuleSetParams | IGeneticAlterationRuleSetParams;
 interface IGeneralRuleSetParams {
     type?: RuleSetType;
     legend_label?: string;
@@ -63,13 +63,13 @@ export interface IGeneticAlterationRuleSetParams extends IGeneralRuleSetParams {
     type: RuleSetType.GENE;
     rule_params: GeneticAlterationRuleParams;
 }
-declare type GeneticAlterationSingleRuleParams = {
+type GeneticAlterationSingleRuleParams = {
     shapes: ShapeParams[];
     legend_label: string;
     exclude_from_legend?: boolean;
     legend_order?: number;
 };
-export declare type GeneticAlterationRuleParams = {
+export type GeneticAlterationRuleParams = {
     always?: GeneticAlterationSingleRuleParams;
     conditional: {
         [datumKey: string]: {
@@ -77,8 +77,8 @@ export declare type GeneticAlterationRuleParams = {
         };
     };
 };
-export declare type RGBAColor = [number, number, number, number];
-declare type RuleParams = {
+export type RGBAColor = [number, number, number, number];
+type RuleParams = {
     shapes: ShapeParams[];
     legend_label?: string;
     exclude_from_legend?: boolean;
@@ -86,7 +86,7 @@ declare type RuleParams = {
     legend_order?: number;
     legend_base_color?: RGBAColor;
 };
-declare type RuleLegendConfig = {
+type RuleLegendConfig = {
     type: 'rule';
     target: any;
 } | {
@@ -109,8 +109,8 @@ export declare enum RuleSetType {
     STACKED_BAR = "stacked_bar",
     GENE = "gene"
 }
-export declare type RuleId = number;
-export declare type RuleWithId = {
+export type RuleId = number;
+export type RuleWithId = {
     id: RuleId;
     rule: Rule;
 };

package/dist/js/oncoprintshape.d.ts

@@ -1,22 +1,22 @@
 import { Datum } from './oncoprintmodel';
 import { RGBAColor } from './oncoprintruleset';
-declare type StringParameter = 'type';
-declare type PercentNumberParameter = 'width' | 'height' | 'x' | 'y' | 'x1' | 'x2' | 'x3' | 'y1' | 'y2' | 'y3';
-declare type PlainNumberParameter = 'z' | 'stroke-width' | 'stroke-opacity';
-declare type RGBAParameter = 'stroke' | 'fill';
-declare type NumberParameter = PercentNumberParameter | PlainNumberParameter;
-declare type Parameter = StringParameter | NumberParameter | RGBAParameter;
-declare type StringParamFunction = (d: Datum) => string;
-declare type NumberParamFunction = (d: Datum) => number;
-declare type RGBAParamFunction = (d: Datum) => RGBAColor;
-export declare type ShapeParams = {
+type StringParameter = 'type';
+type PercentNumberParameter = 'width' | 'height' | 'x' | 'y' | 'x1' | 'x2' | 'x3' | 'y1' | 'y2' | 'y3';
+type PlainNumberParameter = 'z' | 'stroke-width' | 'stroke-opacity';
+type RGBAParameter = 'stroke' | 'fill';
+type NumberParameter = PercentNumberParameter | PlainNumberParameter;
+type Parameter = StringParameter | NumberParameter | RGBAParameter;
+type StringParamFunction = (d: Datum) => string;
+type NumberParamFunction = (d: Datum) => number;
+type RGBAParamFunction = (d: Datum) => RGBAColor;
+export type ShapeParams = {
     [x in StringParameter]?: string | StringParamFunction;
 } & {
     [x in NumberParameter]?: number | NumberParamFunction;
 } & {
     [x in RGBAParameter]?: RGBAColor | RGBAParamFunction;
 };
-export declare type ComputedShapeParams = {
+export type ComputedShapeParams = {
     [x in StringParameter]?: string;
 } & {
     [x in NumberParameter]?: number;
@@ -37,30 +37,30 @@ export declare class Shape {
     markParameterTypes(): void;
     getComputedParams(d: Datum, base_width: number, base_height: number): ComputedShapeParams;
 }
-declare type SpecificComputedShapeParams<ShapeParamType> = {
+type SpecificComputedShapeParams<ShapeParamType> = {
     [x in ShapeParamType & StringParameter]: string;
 } & {
     [x in ShapeParamType & NumberParameter]: number;
 } & {
     [x in ShapeParamType & RGBAParameter]: RGBAColor;
 };
-declare type RectangleParameter = 'width' | 'height' | 'x' | 'y' | 'z' | 'stroke' | 'stroke-width' | 'fill';
-export declare type ComputedRectangleParams = SpecificComputedShapeParams<RectangleParameter>;
+type RectangleParameter = 'width' | 'height' | 'x' | 'y' | 'z' | 'stroke' | 'stroke-width' | 'fill';
+export type ComputedRectangleParams = SpecificComputedShapeParams<RectangleParameter>;
 export declare class Rectangle extends Shape {
     getRequiredParameters(): RectangleParameter[];
 }
-declare type TriangleParameter = 'x1' | 'x2' | 'x3' | 'y1' | 'y2' | 'y3' | 'z' | 'stroke' | 'stroke-width' | 'fill';
-export declare type ComputedTriangleParams = SpecificComputedShapeParams<TriangleParameter>;
+type TriangleParameter = 'x1' | 'x2' | 'x3' | 'y1' | 'y2' | 'y3' | 'z' | 'stroke' | 'stroke-width' | 'fill';
+export type ComputedTriangleParams = SpecificComputedShapeParams<TriangleParameter>;
 export declare class Triangle extends Shape {
     getRequiredParameters(): TriangleParameter[];
 }
-export declare type EllipseParameter = 'width' | 'height' | 'x' | 'y' | 'z' | 'stroke' | 'stroke-width' | 'fill';
-export declare type ComputedEllipseParams = SpecificComputedShapeParams<EllipseParameter>;
+export type EllipseParameter = 'width' | 'height' | 'x' | 'y' | 'z' | 'stroke' | 'stroke-width' | 'fill';
+export type ComputedEllipseParams = SpecificComputedShapeParams<EllipseParameter>;
 export declare class Ellipse extends Shape {
     getRequiredParameters(): EllipseParameter[];
 }
-export declare type LineParameter = 'x1' | 'y1' | 'x2' | 'y2' | 'z' | 'stroke' | 'stroke-width';
-export declare type ComputedLineParams = SpecificComputedShapeParams<LineParameter>;
+export type LineParameter = 'x1' | 'y1' | 'x2' | 'y2' | 'z' | 'stroke' | 'stroke-width';
+export type ComputedLineParams = SpecificComputedShapeParams<LineParameter>;
 export declare class Line extends Shape {
     getRequiredParameters(): LineParameter[];
 }

package/dist/js/oncoprintshapetovertexes.d.ts

@@ -1,5 +1,5 @@
 import { ComputedShapeParams } from './oncoprintshape';
-declare type AddVertexCallback = (vertex: [number, number, number], color: [number, number, number, number]) => void;
+type AddVertexCallback = (vertex: [number, number, number], color: [number, number, number, number]) => void;
 export default function (oncoprint_shape_computed_params: ComputedShapeParams, z_index: number, addVertex: AddVertexCallback): void;
 export declare function getNumWebGLVertexes(shape: ComputedShapeParams): number;
 export {};

package/dist/js/oncoprinttooltip.d.ts

@@ -1,6 +1,7 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
-export declare type OncoprintTooltipParams = {
+export type OncoprintTooltipParams = {
     noselect?: boolean;
 };
 export default class OncoprintToolTip {

package/dist/js/oncoprinttrackinfoview.d.ts

@@ -1,4 +1,5 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import OncoprintToolTip from './oncoprinttooltip';
 import OncoprintModel from './oncoprintmodel';

package/dist/js/oncoprinttrackoptionsview.d.ts

@@ -1,8 +1,9 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import OncoprintModel, { GAP_MODE_ENUM, TrackId, TrackSortDirection } from './oncoprintmodel';
 export declare const CLOSE_MENUS_EVENT = "oncoprint-track-options-view.do-close-menus";
-declare type TrackCallback = (trackId: TrackId) => void;
+type TrackCallback = (trackId: TrackId) => void;
 export default class OncoprintTrackOptionsView {
     private $div;
     private moveUpCallback;

package/dist/js/oncoprintwebglcellview.d.ts

@@ -1,23 +1,24 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
 import OncoprintModel, { ColumnId, TrackId, TrackProp } from './oncoprintmodel';
 import OncoprintToolTip from './oncoprinttooltip';
 import { CellClickCallback, CellMouseOverCallback } from './oncoprint';
-declare type ColorBank = number[];
-declare type OncoprintGap = {
+type ColorBank = number[];
+type OncoprintGap = {
     origin_x: number;
     origin_y: number;
     data: OncoprintGapConfig;
 };
-export declare type OncoprintGapConfig = {
+export type OncoprintGapConfig = {
     labelFormatter: () => string;
     tooltipFormatter: () => string;
 };
-export declare type OncoprintWebGLContext = WebGLRenderingContext & {
+export type OncoprintWebGLContext = WebGLRenderingContext & {
     viewportWidth: number;
     viewportHeight: number;
 };
-export declare type OncoprintShaderProgram = WebGLProgram & {
+export type OncoprintShaderProgram = WebGLProgram & {
     vertexPositionAttribute: any;
     vertexColorAttribute: any;
     vertexOncoprintColumnAttribute: any;
@@ -36,11 +37,11 @@ export declare type OncoprintShaderProgram = WebGLProgram & {
     positionBitPackBaseUniform: WebGLUniformLocation;
     texSizeUniform: WebGLUniformLocation;
 };
-export declare type OncoprintTrackBuffer = WebGLBuffer & {
+export type OncoprintTrackBuffer = WebGLBuffer & {
     itemSize: number;
     numItems: number;
 };
-export declare type OncoprintVertexTrackBuffer = OncoprintTrackBuffer & {
+export type OncoprintVertexTrackBuffer = OncoprintTrackBuffer & {
     specificShapesNumItems: number;
     universalShapesNumItems: number;
 };

package/dist/js/oncoprintzoomslider.d.ts

@@ -1,6 +1,7 @@
 /// <reference types="jquery" />
+/// <reference types="jquery" />
 /// <reference types="jstree" />
-export declare type OncoprintZoomSliderParams = {
+export type OncoprintZoomSliderParams = {
     btn_size: number;
     horizontal?: boolean;
     width?: number;

package/dist/js/polyfill.d.ts

@@ -1,4 +1,4 @@
-export declare type OMath = Math & {
+export type OMath = Math & {
     log2: (x: number) => number;
 };
 export declare const OMath: OMath;

package/dist/js/utils.d.ts

@@ -1,6 +1,6 @@
 import { ComputedShapeParams } from './oncoprintshape';
 import { RGBAColor } from './oncoprintruleset';
-export declare type Omit<T, K extends keyof T> = Pick<T, Exclude<keyof T, K>>;
+export type Omit<T, K extends keyof T> = Pick<T, Exclude<keyof T, K>>;
 export declare function cloneShallow<T extends Object>(obj: T): T;
 export declare function extendArray(target: any[], source: any[]): void;
 export declare function doesCellIntersectPixel(cellHitzone: [number, number], pixelX: number): boolean;

package/dist/js/workers/clustering-worker.d.ts

@@ -1,18 +1,18 @@
-declare type Item = {
+type Item = {
     orderedValueList: number[];
 };
-export declare type EntityItem = Item & {
+export type EntityItem = Item & {
     entityId: string;
 };
-export declare type CaseItem = Item & {
+export type CaseItem = Item & {
     caseId: string;
 };
-export declare type CasesAndEntities = {
+export type CasesAndEntities = {
     [caseId: string]: {
         [entityId: string]: number;
     };
 };
-export declare type ClusteringMessage = {
+export type ClusteringMessage = {
     dimension: 'CASES' | 'ENTITIES';
     casesAndEntities: CasesAndEntities;
 };

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "oncoprintjs",
-  "version": "6.0.8",
+  "version": "6.1.2",
   "description": "A data visualization for cancer genomic data.",
   "types": "./dist/js/oncoprint.d.ts",
   "main": "dist/index.js",
@@ -9,20 +9,17 @@
   "typings": "dist/index.d.ts",
   "styles": "dist/styles.css",
   "scripts": {
-    "build": "cross-env NODE_ENV=production NODE_OPTIONS=--max-old-space-size=2048 yarn run rollup",
-    "start": "yarn run watch",
-    "watch": "yarn run rollup:watch",
-    "watchSSL": "yarn run watch",
+    "build": "cross-env NODE_ENV=production NODE_OPTIONS=--max-old-space-size=2048 pnpm run rollup",
+    "start": "pnpm run watch",
+    "watch": "pnpm run rollup:watch",
+    "watchSSL": "pnpm run watch",
     "rollup": "rollup -c rollup.config.ts",
     "rollup:watch": "rollup -c rollup.config.ts -w",
-    "prepare": "yarn run build",
+    "prepare": "pnpm run build",
     "test": "cross-env jest $GREP --env=jsdom --runInBand --ci --reporters=default --reporters=jest-junit --passWithNoTests",
-    "test:watch": "yarn run test --watch"
-  },
-  "repository": {
-    "type": "git",
-    "url": "https://github.com/cBioPortal/oncoprintjs.git"
+    "test:watch": "pnpm run test --watch"
   },
+  "repository": "cBioPortal/cbioportal-frontend",
   "keywords": [
     "cancer",
     "genomics",
@@ -49,9 +46,9 @@
   ],
   "license": "ISC",
   "bugs": {
-    "url": "https://github.com/cBioPortal/oncoprintjs/issues"
+    "url": "https://github.com/cBioPortal/cbioportal-frontend/issues"
   },
-  "homepage": "https://github.com/cBioPortal/oncoprintjs",
+  "homepage": "https://github.com/cBioPortal/cbioportal-frontend",
   "dependencies": {
     "gl-matrix": "2.3.2",
     "jquery": "^3.2.1",
@@ -60,5 +57,5 @@
     "tayden-clusterfck": "^0.7.0",
     "typescript": "4.0.3"
   },
-  "gitHead": "55fd9b0a7ffd20d5fea0d166181bc5838e6aa4f3"
+  "gitHead": "727d3a488de0851176ae5660769364e276b94bc7"
 }