nogrep 1.0.8 → 1.1.1

package/package.json

@@ -1,13 +1,13 @@
 {
   "name": "nogrep",
-  "version": "1.0.8",
+  "version": "1.1.1",
   "description": "Navigable codebase index for Claude Code — stop grepping, start navigating",
   "repository": {
     "type": "git",
     "url": "https://github.com/alirezanasseh/nogrep"
   },
   "type": "module",
-  "files": ["dist", "commands", "hooks", "scripts", "templates", "docs"],
+  "files": ["plugin/dist", "plugin/commands", "plugin/hooks", "plugin/templates", "plugin/.claude-plugin", "scripts"],
   "scripts": {
     "build": "tsup",
     "prepublishOnly": "npm run build",

package/plugin/.claude-plugin/plugin.json

@@ -0,0 +1,8 @@
+{
+  "name": "nogrep",
+  "version": "1.0.5",
+  "description": "Navigable codebase index for Claude Code — stop grepping, start navigating",
+  "author": {
+    "name": "Alireza Nasseh"
+  }
+}

package/{dist/chunk-SMUAF6SM.js → plugin/dist/chunk-OJSJ63PH.js}

@@ -9,4 +9,4 @@ var NogrepError = class extends Error {
 export {
   NogrepError
 };
-//# sourceMappingURL=chunk-SMUAF6SM.js.map
+//# sourceMappingURL=chunk-OJSJ63PH.js.map

package/plugin/dist/chunk-OJSJ63PH.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../../scripts/types.ts"],"sourcesContent":["// --- Directory / File types ---\n\nexport interface DirectoryNode {\n  name: string\n  path: string\n  type: 'file' | 'directory'\n  children?: DirectoryNode[]\n}\n\nexport interface ManifestFile {\n  path: string\n  type: string\n  depth: number\n}\n\nexport interface ChurnEntry {\n  path: string\n  changes: number\n}\n\nexport interface FileSize {\n  path: string\n  bytes: number\n}\n\n// --- Signal collection ---\n\nexport interface SignalResult {\n  directoryTree: DirectoryNode[]\n  extensionMap: Record<string, number>\n  manifests: ManifestFile[]\n  entryPoints: string[]\n  gitChurn: ChurnEntry[]\n  largeFiles: FileSize[]\n  envFiles: string[]\n  testFiles: string[]\n}\n\n// --- Stack detection ---\n\nexport interface StackConventions {\n  entryPattern: string\n  testPattern: string\n  configLocation: string\n}\n\nexport interface DomainCluster {\n  name: string\n  path: string\n  confidence: number\n}\n\nexport interface StackResult {\n  primaryLanguage: string\n  frameworks: string[]\n  architecture: 'monolith' | 'monorepo' | 'multi-repo' | 'microservice' | 'library'\n  domainClusters: DomainCluster[]\n  conventions: StackConventions\n  stackHints: string\n  dynamicTaxonomy: { domain: string[]; tech: string[] }\n}\n\n// --- Tags ---\n\nexport interface TagSet {\n  domain: string[]\n  layer: string[]\n  tech: string[]\n  concern: string[]\n  type: string[]\n}\n\nexport interface Taxonomy {\n  static: {\n    layer: string[]\n    concern: string[]\n    type: string[]\n  }\n  dynamic: {\n    domain: string[]\n    tech: string[]\n  }\n  custom: Record<string, string[]>\n}\n\n// --- Relations ---\n\nexport interface Relation {\n  id: string\n  reason: string\n}\n\nexport interface ExternalDep {\n  name: string\n  usage: string\n}\n\nexport interface SyncMeta {\n  commit: string\n  timestamp: string\n  srcHash: string\n}\n\n// --- Context nodes ---\n\nexport interface NodeResult {\n  id: string\n  title: string\n  category: 'domain' | 'architecture' | 'flow' | 'entity'\n  tags: TagSet\n  relatesTo: Relation[]\n  inverseRelations: Relation[]\n  srcPaths: string[]\n  keywords: string[]\n  lastSynced: SyncMeta\n  purpose: string\n  publicSurface: string[]\n  doesNotOwn: string[]\n  externalDeps: ExternalDep[]\n  gotchas: string[]\n}\n\n// --- Index ---\n\nexport interface PathEntry {\n  context: string\n  tags: string[]\n}\n\nexport interface IndexJson {\n  version: string\n  generatedAt: string\n  commit: string\n  stack: Pick<StackResult, 'primaryLanguage' | 'frameworks' | 'architecture'>\n  tags: Record<string, string[]>\n  keywords: Record<string, string[]>\n  paths: Record<string, PathEntry>\n}\n\n// --- Registry ---\n\nexport interface RegistryMapping {\n  glob: string\n  contextFile: string\n  watch: boolean\n}\n\nexport interface RegistryJson {\n  mappings: RegistryMapping[]\n}\n\n// --- Query ---\n\nexport interface RankedResult {\n  contextFile: string\n  score: number\n  matchedOn: string[]\n  summary: string\n}\n\n// --- Validation ---\n\nexport interface StaleResult {\n  file: string\n  isStale: boolean\n  reason?: string\n}\n\n// --- Settings ---\n\nexport interface NogrepSettings {\n  enabled: boolean\n}\n\n// --- Errors ---\n\nexport type NogrepErrorCode = 'NO_INDEX' | 'NO_GIT' | 'IO_ERROR' | 'STALE'\n\nexport class NogrepError extends Error {\n  constructor(\n    message: string,\n    public code: NogrepErrorCode,\n  ) {\n    super(message)\n  }\n}\n"],"mappings":";AAkLO,IAAM,cAAN,cAA0B,MAAM;AAAA,EACrC,YACE,SACO,MACP;AACA,UAAM,OAAO;AAFN;AAAA,EAGT;AACF;","names":[]}

package/{dist → plugin/dist}/query.js

@@ -1,6 +1,6 @@
 import {
   NogrepError
-} from "./chunk-SMUAF6SM.js";
+} from "./chunk-OJSJ63PH.js";
 
 // scripts/query.ts
 import { readFile } from "fs/promises";

package/plugin/dist/query.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../../scripts/query.ts"],"sourcesContent":["import { readFile } from 'node:fs/promises'\nimport { join, resolve as resolvePath } from 'node:path'\nimport { parseArgs } from 'node:util'\nimport type { IndexJson, RankedResult, Taxonomy } from './types.js'\nimport { NogrepError } from './types.js'\n\n// --- Term extraction ---\n\nexport function extractTerms(\n  question: string,\n  taxonomy: Taxonomy,\n): { tags: string[]; keywords: string[] } {\n  const words = question\n    .toLowerCase()\n    .replace(/[^\\w\\s-]/g, ' ')\n    .split(/\\s+/)\n    .filter(w => w.length > 1)\n\n  const tags: string[] = []\n  const keywords: string[] = []\n\n  // Collect all taxonomy values for matching\n  const tagLookup = new Map<string, string>()\n\n  for (const val of taxonomy.static.layer) {\n    tagLookup.set(val.toLowerCase(), `layer:${val}`)\n  }\n  for (const val of taxonomy.static.concern) {\n    tagLookup.set(val.toLowerCase(), `concern:${val}`)\n  }\n  for (const val of taxonomy.static.type) {\n    tagLookup.set(val.toLowerCase(), `type:${val}`)\n  }\n  for (const val of taxonomy.dynamic.domain) {\n    tagLookup.set(val.toLowerCase(), `domain:${val}`)\n  }\n  for (const val of taxonomy.dynamic.tech) {\n    tagLookup.set(val.toLowerCase(), `tech:${val}`)\n  }\n  for (const [cat, values] of Object.entries(taxonomy.custom)) {\n    for (const val of values) {\n      tagLookup.set(val.toLowerCase(), `${cat}:${val}`)\n    }\n  }\n\n  // Stop words to skip as keywords\n  const stopWords = new Set([\n    'the', 'is', 'at', 'in', 'of', 'on', 'to', 'a', 'an', 'and', 'or',\n    'for', 'it', 'do', 'does', 'how', 'what', 'where', 'which', 'when',\n    'who', 'why', 'this', 'that', 'with', 'from', 'by', 'be', 'as',\n    'are', 'was', 'were', 'been', 'has', 'have', 'had', 'not', 'but',\n    'if', 'my', 'our', 'its', 'can', 'will', 'should', 'would', 'could',\n    'about', 'after', 'work', 'works', 'use', 'uses', 'used',\n  ])\n\n  for (const word of words) {\n    const tag = tagLookup.get(word)\n    if (tag && !tags.includes(tag)) {\n      tags.push(tag)\n    }\n\n    // Also check hyphenated compound matches (e.g. \"error-handling\")\n    if (!tag && !stopWords.has(word)) {\n      keywords.push(word)\n    }\n  }\n\n  // Check for multi-word tag matches (e.g. \"error handling\" → \"error-handling\")\n  const questionLower = question.toLowerCase()\n  for (const [val, tag] of tagLookup.entries()) {\n    if (val.includes('-')) {\n      const spacedVersion = val.replace(/-/g, ' ')\n      if (questionLower.includes(spacedVersion) && !tags.includes(tag)) {\n        tags.push(tag)\n      }\n      if (questionLower.includes(val) && !tags.includes(tag)) {\n        tags.push(tag)\n      }\n    }\n  }\n\n  return { tags, keywords }\n}\n\n// --- Resolution ---\n\nexport function resolveQuery(\n  terms: { tags: string[]; keywords: string[] },\n  index: IndexJson,\n  limit = 5,\n): RankedResult[] {\n  const scoreMap = new Map<string, { score: number; matchedOn: string[] }>()\n\n  function addMatch(contextFile: string, score: number, matchLabel: string): void {\n    const existing = scoreMap.get(contextFile)\n    if (existing) {\n      existing.score += score\n      existing.matchedOn.push(matchLabel)\n    } else {\n      scoreMap.set(contextFile, { score, matchedOn: [matchLabel] })\n    }\n  }\n\n  // Tag matching: +2 per match\n  for (const tag of terms.tags) {\n    const files = index.tags[tag]\n    if (files) {\n      for (const file of files) {\n        addMatch(file, 2, `tag:${tag}`)\n      }\n    }\n  }\n\n  // Keyword matching: +1 per match\n  for (const kw of terms.keywords) {\n    const kwLower = kw.toLowerCase()\n\n    // Direct keyword lookup\n    const files = index.keywords[kwLower]\n    if (files) {\n      for (const file of files) {\n        addMatch(file, 1, `keyword:${kwLower}`)\n      }\n    }\n\n    // Also search all index keywords for partial matches\n    for (const [indexKw, kwFiles] of Object.entries(index.keywords)) {\n      if (indexKw === kwLower) continue // Already handled\n      if (indexKw.includes(kwLower) || kwLower.includes(indexKw)) {\n        for (const file of kwFiles) {\n          addMatch(file, 1, `keyword:${indexKw}`)\n        }\n      }\n    }\n  }\n\n  // Sort by score descending, then alphabetically for ties\n  const results: RankedResult[] = [...scoreMap.entries()]\n    .sort((a, b) => b[1].score - a[1].score || a[0].localeCompare(b[0]))\n    .slice(0, limit)\n    .map(([contextFile, { score, matchedOn }]) => ({\n      contextFile,\n      score,\n      matchedOn: [...new Set(matchedOn)],\n      summary: `Matched: ${[...new Set(matchedOn)].join(', ')}`,\n    }))\n\n  return results\n}\n\n// --- Index + taxonomy loading ---\n\nasync function loadIndex(projectRoot: string): Promise<IndexJson> {\n  const indexPath = join(projectRoot, '.nogrep', '_index.json')\n  try {\n    const content = await readFile(indexPath, 'utf-8')\n    return JSON.parse(content) as IndexJson\n  } catch {\n    throw new NogrepError(\n      'No .nogrep/_index.json found. Run /nogrep:init first.',\n      'NO_INDEX',\n    )\n  }\n}\n\nasync function loadTaxonomy(projectRoot: string): Promise<Taxonomy> {\n  const taxonomyPath = join(projectRoot, '.nogrep', '_taxonomy.json')\n  try {\n    const content = await readFile(taxonomyPath, 'utf-8')\n    return JSON.parse(content) as Taxonomy\n  } catch {\n    // Return default taxonomy if file doesn't exist\n    return {\n      static: {\n        layer: ['presentation', 'business', 'data', 'infrastructure', 'cross-cutting'],\n        concern: ['security', 'performance', 'caching', 'validation', 'error-handling', 'idempotency', 'observability'],\n        type: ['module', 'flow', 'entity', 'integration', 'config', 'ui', 'test'],\n      },\n      dynamic: { domain: [], tech: [] },\n      custom: {},\n    }\n  }\n}\n\nfunction buildTaxonomyFromIndex(index: IndexJson, baseTaxonomy: Taxonomy): Taxonomy {\n  // Extract dynamic domain and tech values from the index tags\n  const domains = new Set<string>(baseTaxonomy.dynamic.domain)\n  const techs = new Set<string>(baseTaxonomy.dynamic.tech)\n\n  for (const tagKey of Object.keys(index.tags)) {\n    const [category, value] = tagKey.split(':')\n    if (!category || !value) continue\n    if (category === 'domain') domains.add(value)\n    if (category === 'tech') techs.add(value)\n  }\n\n  return {\n    ...baseTaxonomy,\n    dynamic: {\n      domain: [...domains],\n      tech: [...techs],\n    },\n  }\n}\n\n// --- Formatting ---\n\nfunction formatPaths(results: RankedResult[]): string {\n  return results.map(r => r.contextFile).join('\\n')\n}\n\nfunction formatJson(results: RankedResult[]): string {\n  return JSON.stringify(results, null, 2)\n}\n\nfunction formatSummary(results: RankedResult[]): string {\n  if (results.length === 0) return 'No matching context files found.'\n  return results\n    .map(r => `- ${r.contextFile} (score: ${r.score}) — ${r.summary}`)\n    .join('\\n')\n}\n\n// --- CLI ---\n\nasync function main(): Promise<void> {\n  const { values } = parseArgs({\n    options: {\n      tags: { type: 'string' },\n      keywords: { type: 'string' },\n      question: { type: 'string' },\n      format: { type: 'string', default: 'json' },\n      limit: { type: 'string', default: '5' },\n      root: { type: 'string', default: process.cwd() },\n    },\n    strict: true,\n  })\n\n  const root = resolvePath(values.root ?? process.cwd())\n  const limit = parseInt(values.limit ?? '5', 10)\n  const format = values.format ?? 'json'\n\n  const index = await loadIndex(root)\n  const baseTaxonomy = await loadTaxonomy(root)\n  const taxonomy = buildTaxonomyFromIndex(index, baseTaxonomy)\n\n  let terms: { tags: string[]; keywords: string[] }\n\n  if (values.question) {\n    terms = extractTerms(values.question, taxonomy)\n  } else if (values.tags || values.keywords) {\n    const tags = values.tags\n      ? values.tags.split(',').map(t => t.trim()).filter(Boolean)\n      : []\n    const keywords = values.keywords\n      ? values.keywords.split(',').map(k => k.trim()).filter(Boolean)\n      : []\n    terms = { tags, keywords }\n  } else {\n    process.stderr.write(\n      JSON.stringify({ error: 'Usage: node query.js --tags <tags> | --keywords <words> | --question <text> [--format paths|json|summary] [--limit N]' }) + '\\n',\n    )\n    process.exitCode = 1\n    return\n  }\n\n  const results = resolveQuery(terms, index, limit)\n\n  switch (format) {\n    case 'paths':\n      process.stdout.write(formatPaths(results) + '\\n')\n      break\n    case 'summary':\n      process.stdout.write(formatSummary(results) + '\\n')\n      break\n    case 'json':\n    default:\n      process.stdout.write(formatJson(results) + '\\n')\n      break\n  }\n}\n\nmain().catch((err: unknown) => {\n  if (err instanceof NogrepError) {\n    process.stderr.write(JSON.stringify({ error: err.message, code: err.code }) + '\\n')\n  } else {\n    const message = err instanceof Error ? err.message : String(err)\n    process.stderr.write(JSON.stringify({ error: message }) + '\\n')\n  }\n  process.exitCode = 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package/plugin/dist/settings.js.map

@@ -0,0 +1 @@
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package/plugin/dist/signals.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../../scripts/signals.ts"],"sourcesContent":["import { readdir, stat, readFile } from 'fs/promises'\nimport { join, extname, relative, resolve } from 'path'\nimport { execFile } from 'child_process'\nimport { promisify } from 'util'\nimport type { SignalResult, DirectoryNode, ManifestFile, ChurnEntry, FileSize } from './types.js'\n\nconst execFileAsync = promisify(execFile)\n\nconst SKIP_DIRS = new Set([\n  'node_modules', 'dist', 'build', '.git', 'coverage',\n  '.next', '.nuxt', '__pycache__', '.venv', 'venv',\n  '.idea', '.vscode', '.nogrep',\n])\n\nconst MANIFEST_NAMES: Record<string, string> = {\n  'package.json': 'npm',\n  'requirements.txt': 'pip',\n  'pom.xml': 'maven',\n  'go.mod': 'go',\n  'Podfile': 'cocoapods',\n  'Cargo.toml': 'cargo',\n  'pubspec.yaml': 'flutter',\n  'composer.json': 'composer',\n}\n\nconst ENTRY_NAMES = new Set(['main', 'index', 'app', 'server'])\n\nconst TEST_PATTERNS = [\n  /\\.test\\.\\w+$/,\n  /\\.spec\\.\\w+$/,\n  /_test\\.\\w+$/,\n  /^test_.*\\.py$/,\n]\n\ninterface CollectOptions {\n  exclude?: string[]\n  maxDepth?: number\n}\n\nexport async function collectSignals(\n  root: string,\n  options: CollectOptions = {},\n): Promise<SignalResult> {\n  const absRoot = resolve(root)\n  const maxDepth = options.maxDepth ?? 4\n  const extraSkip = new Set(options.exclude ?? [])\n\n  const allFiles: { path: string; bytes: number }[] = []\n  const extensionMap: Record<string, number> = {}\n  const manifests: ManifestFile[] = []\n  const entryPoints: string[] = []\n  const envFiles: string[] = []\n  const testFiles: string[] = []\n\n  const directoryTree = await walkDirectory(absRoot, absRoot, 0, maxDepth, extraSkip, {\n    allFiles,\n    extensionMap,\n    manifests,\n    entryPoints,\n    envFiles,\n    testFiles,\n  })\n\n  const gitChurn = await collectGitChurn(absRoot)\n\n  const largeFiles = allFiles\n    .sort((a, b) => b.bytes - a.bytes)\n    .slice(0, 20)\n    .map(f => ({ path: f.path, bytes: f.bytes }))\n\n  return {\n    directoryTree,\n    extensionMap,\n    manifests,\n    entryPoints,\n    gitChurn,\n    largeFiles,\n    envFiles,\n    testFiles,\n  }\n}\n\ninterface Collectors {\n  allFiles: { path: string; bytes: number }[]\n  extensionMap: Record<string, number>\n  manifests: ManifestFile[]\n  entryPoints: string[]\n  envFiles: string[]\n  testFiles: string[]\n}\n\nasync function walkDirectory(\n  dir: string,\n  root: string,\n  depth: number,\n  maxDepth: number,\n  extraSkip: Set<string>,\n  collectors: Collectors,\n): Promise<DirectoryNode[]> {\n  if (depth > maxDepth) return []\n\n  let entries\n  try {\n    entries = await readdir(dir, { withFileTypes: true })\n  } catch {\n    return []\n  }\n\n  const nodes: DirectoryNode[] = []\n\n  for (const entry of entries) {\n    const fullPath = join(dir, entry.name)\n    const relPath = relative(root, fullPath)\n\n    if (entry.isDirectory()) {\n      if (SKIP_DIRS.has(entry.name) || extraSkip.has(entry.name)) continue\n\n      const children = await walkDirectory(fullPath, root, depth + 1, maxDepth, extraSkip, collectors)\n      nodes.push({ name: entry.name, path: relPath, type: 'directory', children })\n    } else if (entry.isFile()) {\n      nodes.push({ name: entry.name, path: relPath, type: 'file' })\n\n      let fileBytes = 0\n      try {\n        const s = await stat(fullPath)\n        fileBytes = s.size\n      } catch {\n        // skip\n      }\n\n      collectors.allFiles.push({ path: relPath, bytes: fileBytes })\n\n      const ext = extname(entry.name)\n      if (ext) {\n        collectors.extensionMap[ext] = (collectors.extensionMap[ext] ?? 0) + 1\n      }\n\n      // Manifest check\n      if (entry.name in MANIFEST_NAMES) {\n        collectors.manifests.push({\n          path: relPath,\n          type: MANIFEST_NAMES[entry.name]!,\n          depth,\n        })\n      }\n\n      // Entry point check — root or src/ level\n      if (depth <= 1 || (depth === 2 && dir.endsWith('/src'))) {\n        const nameWithoutExt = entry.name.replace(/\\.\\w+$/, '')\n        if (ENTRY_NAMES.has(nameWithoutExt)) {\n          collectors.entryPoints.push(relPath)\n        }\n      }\n\n      // Env files\n      if (entry.name.startsWith('.env')) {\n        collectors.envFiles.push(relPath)\n      }\n\n      // Config directories are handled at directory level\n      // But we also detect config files at root\n      if (depth === 0 && entry.name.match(/^config\\./)) {\n        collectors.envFiles.push(relPath)\n      }\n\n      // Test files\n      const fileName = entry.name\n      if (TEST_PATTERNS.some(p => p.test(fileName))) {\n        collectors.testFiles.push(relPath)\n      }\n    }\n  }\n\n  // Check if this directory is a config directory\n  const dirName = dir.split('/').pop()\n  if (dirName === 'config' && depth <= 2) {\n    collectors.envFiles.push(relative(root, dir))\n  }\n\n  return nodes\n}\n\nasync function collectGitChurn(root: string): Promise<ChurnEntry[]> {\n  try {\n    const { stdout } = await execFileAsync(\n      'git',\n      ['log', '--stat', '--oneline', '-50', '--pretty=format:'],\n      { cwd: root, maxBuffer: 1024 * 1024 },\n    )\n\n    const changeCounts: Record<string, number> = {}\n\n    for (const line of stdout.split('\\n')) {\n      // Match lines like: src/billing/service.ts | 42 +++---\n      const match = line.match(/^\\s+(.+?)\\s+\\|\\s+(\\d+)/)\n      if (match) {\n        const filePath = match[1]!.trim()\n        const changes = parseInt(match[2]!, 10)\n        changeCounts[filePath] = (changeCounts[filePath] ?? 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package/plugin/dist/trim.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../../scripts/trim.ts"],"sourcesContent":["import { readFile } from 'fs/promises'\nimport { resolve, extname, basename } from 'path'\n\nconst MAX_CLUSTER_LINES = 300\n\ninterface TrimOptions {\n  maxLines?: number\n}\n\n// Language-agnostic regex patterns for stripping function/method bodies\n// Strategy: find opening braces after signatures, track depth, remove body content\n\nfunction trimTypeScript(content: string): string {\n  const lines = content.split('\\n')\n  const result: string[] = []\n  let braceDepth = 0\n  let inBody = false\n  let bodyStartDepth = 0\n\n  for (const line of lines) {\n    const trimmed = line.trim()\n\n    // Always keep: empty lines at top level, imports, type/interface, decorators, exports of types\n    if (braceDepth === 0 || !inBody) {\n      if (\n        trimmed === '' ||\n        trimmed.startsWith('import ') ||\n        trimmed.startsWith('export type ') ||\n        trimmed.startsWith('export interface ') ||\n        trimmed.startsWith('export enum ') ||\n        trimmed.startsWith('export const ') ||\n        trimmed.startsWith('type ') ||\n        trimmed.startsWith('interface ') ||\n        trimmed.startsWith('enum ') ||\n        trimmed.startsWith('@') ||\n        trimmed.startsWith('//') ||\n        trimmed.startsWith('/*') ||\n        trimmed.startsWith('*') ||\n        trimmed.startsWith('declare ')\n      ) {\n        result.push(line)\n        // Count braces even in kept lines\n        braceDepth += countChar(trimmed, '{') - countChar(trimmed, '}')\n        continue\n      }\n    }\n\n    const openBraces = countChar(trimmed, '{')\n    const closeBraces = countChar(trimmed, '}')\n\n    if (!inBody) {\n      // Detect function/method signature — line with opening brace\n      if (isSignatureLine(trimmed) && openBraces > closeBraces) {\n        result.push(line)\n        braceDepth += openBraces - closeBraces\n        inBody = true\n        bodyStartDepth = braceDepth\n        continue\n      }\n\n      // Class/interface declaration — keep but don't treat as body\n      if (isClassOrInterfaceLine(trimmed)) {\n        result.push(line)\n        braceDepth += openBraces - closeBraces\n        continue\n      }\n\n      // Keep the line (top-level statement, property declaration, etc.)\n      result.push(line)\n      braceDepth += openBraces - closeBraces\n    } else {\n      // Inside a function body — skip lines\n      braceDepth += openBraces - closeBraces\n\n      // Check if we've closed back to where the body started\n      if (braceDepth < bodyStartDepth) {\n        // Add closing brace\n        result.push(line)\n        inBody = false\n      }\n    }\n  }\n\n  return result.join('\\n')\n}\n\nfunction trimPython(content: string): string {\n  const lines = content.split('\\n')\n  const result: string[] = []\n  let skipIndent = -1\n\n  for (let i = 0; i < lines.length; i++) {\n    const line = lines[i]!\n    const trimmed = line.trim()\n    const indent = line.length - line.trimStart().length\n\n    // If we're skipping a body and this line is still indented deeper, skip it\n    if (skipIndent >= 0) {\n      if (trimmed === '' || indent > skipIndent) {\n        continue\n      }\n      // We've exited the body\n      skipIndent = -1\n    }\n\n    // Always keep: comments, imports, class defs, decorators, type hints, module-level assignments\n    if (\n      trimmed === '' ||\n      trimmed.startsWith('#') ||\n      trimmed.startsWith('import ') ||\n      trimmed.startsWith('from ') ||\n      trimmed.startsWith('@') ||\n      trimmed.startsWith('class ') ||\n      /^[A-Z_][A-Z_0-9]*\\s*=/.test(trimmed)\n    ) {\n      result.push(line)\n      continue\n    }\n\n    // Function/method definition — keep signature, skip body\n    if (trimmed.startsWith('def ') || trimmed.startsWith('async def ')) {\n      result.push(line)\n      // If the next non-empty line has docstring, keep it\n      const docIdx = findDocstring(lines, i + 1, indent)\n      if (docIdx > i) {\n        for (let j = i + 1; j <= docIdx; j++) {\n          result.push(lines[j]!)\n        }\n      }\n      skipIndent = indent\n      continue\n    }\n\n    // Keep everything else at module/class level\n    result.push(line)\n  }\n\n  return result.join('\\n')\n}\n\nfunction trimJava(content: string): string {\n  // Java/Kotlin — very similar to TypeScript brace-matching\n  const lines = content.split('\\n')\n  const result: string[] = []\n  let braceDepth = 0\n  let inBody = false\n  let bodyStartDepth = 0\n\n  for (const line of lines) {\n    const trimmed = line.trim()\n\n    if (braceDepth === 0 || !inBody) {\n      if (\n        trimmed === '' ||\n        trimmed.startsWith('import ') ||\n        trimmed.startsWith('package ') ||\n        trimmed.startsWith('@') ||\n        trimmed.startsWith('//') ||\n        trimmed.startsWith('/*') ||\n        trimmed.startsWith('*') ||\n        trimmed.startsWith('public interface ') ||\n        trimmed.startsWith('interface ') ||\n        trimmed.startsWith('public enum ') ||\n        trimmed.startsWith('enum ')\n      ) {\n        result.push(line)\n        braceDepth += countChar(trimmed, '{') - countChar(trimmed, '}')\n        continue\n      }\n    }\n\n    const openBraces = countChar(trimmed, '{')\n    const closeBraces = countChar(trimmed, '}')\n\n    if (!inBody) {\n      if (isJavaMethodSignature(trimmed) && openBraces > closeBraces) {\n        result.push(line)\n        braceDepth += openBraces - closeBraces\n        inBody = true\n        bodyStartDepth = braceDepth\n        continue\n      }\n\n      if (isJavaClassLine(trimmed)) {\n        result.push(line)\n        braceDepth += openBraces - closeBraces\n        continue\n      }\n\n      result.push(line)\n      braceDepth += openBraces - closeBraces\n    } else {\n      braceDepth += openBraces - closeBraces\n      if (braceDepth < bodyStartDepth) {\n        result.push(line)\n        inBody = false\n      }\n    }\n  }\n\n  return result.join('\\n')\n}\n\nfunction trimGeneric(content: string): string {\n  // For unknown languages, just return as-is (truncation handles size)\n  return content\n}\n\n// --- Helpers ---\n\nfunction countChar(s: string, ch: string): number {\n  let count = 0\n  let inString = false\n  let stringChar = ''\n  for (let i = 0; i < s.length; i++) {\n    const c = s[i]!\n    if (inString) {\n      if (c === stringChar && s[i - 1] !== '\\\\') inString = false\n    } else if (c === '\"' || c === \"'\" || c === '`') {\n      inString = true\n      stringChar = c\n    } else if (c === ch) {\n      count++\n    }\n  }\n  return count\n}\n\nfunction isSignatureLine(trimmed: string): boolean {\n  return /^(export\\s+)?(async\\s+)?function\\s/.test(trimmed) ||\n    /^(public|private|protected|static|async|get|set|\\*)\\s/.test(trimmed) ||\n    /^(readonly\\s+)?[a-zA-Z_$][a-zA-Z0-9_$]*\\s*\\(/.test(trimmed) ||\n    /^(export\\s+)?(const|let|var)\\s+\\w+\\s*=\\s*(async\\s+)?\\(/.test(trimmed) ||\n   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package/plugin/dist/types.js

@@ -0,0 +1,7 @@
+import {
+  NogrepError
+} from "./chunk-OJSJ63PH.js";
+export {
+  NogrepError
+};
+//# sourceMappingURL=types.js.map

package/{dist → plugin/dist}/validate.js

@@ -1,6 +1,6 @@
 import {
   NogrepError
-} from "./chunk-SMUAF6SM.js";
+} from "./chunk-OJSJ63PH.js";
 
 // scripts/validate.ts
 import { readFile } from "fs/promises";

package/plugin/dist/validate.js.map

@@ -0,0 +1 @@
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package/plugin/dist/write.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../../scripts/write.ts"],"sourcesContent":["import { readFile, writeFile, mkdir, readdir } from 'node:fs/promises'\nimport { join, resolve, dirname } from 'node:path'\nimport { execFile } from 'node:child_process'\nimport { promisify } from 'node:util'\nimport { createHash } from 'node:crypto'\nimport { glob } from 'glob'\nimport matter from 'gray-matter'\nimport yaml from 'js-yaml'\nimport type {\n  NodeResult,\n  StackResult,\n  IndexJson,\n  RegistryJson,\n  PathEntry,\n  NogrepError,\n} from './types.js'\n\nconst execFileAsync = promisify(execFile)\n\n// --- Manual Notes preservation ---\n\nfunction extractManualNotes(content: string): string {\n  const match = content.match(\n    /## Manual Notes\\n([\\s\\S]*?)(?=\\n## |\\n---|\\s*$)/,\n  )\n  return match ? match[1]!.trim() : ''\n}\n\n// --- Context node markdown generation ---\n\nfunction buildNodeFrontmatter(node: NodeResult): Record<string, unknown> {\n  return {\n    id: node.id,\n    title: node.title,\n    category: node.category,\n    tags: {\n      domain: node.tags.domain,\n      layer: node.tags.layer,\n      tech: node.tags.tech,\n      concern: node.tags.concern,\n      type: node.tags.type,\n    },\n    relates_to: node.relatesTo.map(r => ({ id: r.id, reason: r.reason })),\n    inverse_relations: node.inverseRelations.map(r => ({ id: r.id, reason: r.reason })),\n    src_paths: node.srcPaths,\n    keywords: node.keywords,\n    last_synced: {\n      commit: node.lastSynced.commit,\n      timestamp: node.lastSynced.timestamp,\n      src_hash: node.lastSynced.srcHash,\n    },\n  }\n}\n\nfunction buildNodeMarkdown(node: NodeResult, manualNotes: string): string {\n  const fm = buildNodeFrontmatter(node)\n  const yamlStr = yaml.dump(fm, { lineWidth: -1, quotingType: '\"', forceQuotes: false })\n\n  const sections: string[] = []\n  sections.push(`---\\n${yamlStr.trimEnd()}\\n---`)\n\n  sections.push(`\\n## Purpose\\n${node.purpose}`)\n\n  if (node.publicSurface.length > 0) {\n    sections.push(`\\n## Public Surface\\n\\n\\`\\`\\`\\n${node.publicSurface.join('\\n')}\\n\\`\\`\\``)\n  }\n\n  if (node.doesNotOwn.length > 0) {\n    sections.push(`\\n## Does Not Own\\n${node.doesNotOwn.map(d => `- ${d}`).join('\\n')}`)\n  }\n\n  if (node.gotchas.length > 0) {\n    sections.push(`\\n## Gotchas\\n${node.gotchas.map(g => `- ${g}`).join('\\n')}`)\n  }\n\n  const notesContent = manualNotes || '_Human annotations. Never overwritten by nogrep update._'\n  sections.push(`\\n## Manual Notes\\n${notesContent}`)\n\n  return sections.join('\\n') + '\\n'\n}\n\n// --- Write context files ---\n\nfunction categoryDir(category: NodeResult['category']): string {\n  switch (category) {\n    case 'domain': return 'domains'\n    case 'architecture': return 'architecture'\n    case 'flow': return 'flows'\n    case 'entity': return 'entities'\n  }\n}\n\nexport async function writeContextNodes(\n  nodes: NodeResult[],\n  outputDir: string,\n): Promise<void> {\n  for (const node of nodes) {\n    const dir = join(outputDir, categoryDir(node.category))\n    await mkdir(dir, { recursive: true })\n\n    const filePath = join(dir, `${node.id}.md`)\n\n    // Preserve existing manual notes\n    let manualNotes = ''\n    try {\n      const existing = await readFile(filePath, 'utf-8')\n      manualNotes = extractManualNotes(existing)\n    } catch {\n      // File doesn't exist yet\n    }\n\n    const content = buildNodeMarkdown(node, manualNotes)\n    await writeFile(filePath, content, 'utf-8')\n  }\n}\n\n// --- Build index ---\n\nexport function buildIndex(\n  nodes: NodeResult[],\n  stack: Pick<StackResult, 'primaryLanguage' | 'frameworks' | 'architecture'>,\n): IndexJson {\n  const tags: Record<string, string[]> = {}\n  const keywords: Record<string, string[]> = {}\n  const paths: Record<string, PathEntry> = {}\n\n  // Populate inverse relations\n  const inverseMap = new Map<string, Array<{ fromId: string; reason: string }>>()\n  for (const node of nodes) {\n    for (const rel of node.relatesTo) {\n      const existing = inverseMap.get(rel.id) ?? 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[]\n    for (const inv of inverseEntries) {\n      if (!node.inverseRelations.some(r => r.id === inv.fromId)) {\n        node.inverseRelations.push({ id: inv.fromId, reason: inv.reason })\n      }\n    }\n\n    // Build tag index\n    const tagCategories: Array<[string, string[]]> = [\n      ['domain', node.tags.domain],\n      ['layer', node.tags.layer],\n      ['tech', node.tags.tech],\n      ['concern', node.tags.concern],\n      ['type', node.tags.type],\n    ]\n\n    const flatTags: string[] = []\n    for (const [cat, values] of tagCategories) {\n      for (const val of values) {\n        const tagKey = `${cat}:${val}`\n        flatTags.push(tagKey)\n        const tagList = tags[tagKey] ?? []\n        if (!tagList.includes(contextFile)) {\n          tagList.push(contextFile)\n        }\n        tags[tagKey] = tagList\n      }\n    }\n\n    // Build keyword index\n    for (const kw of node.keywords) {\n      const kwList = keywords[kw] ?? 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`.nogrep/${categoryDir(node.category)}/${node.id}.md`,\n      watch: true,\n    })),\n  )\n\n  return { mappings }\n}\n\n// --- Patch CLAUDE.md ---\n\nexport async function patchClaudeMd(projectRoot: string): Promise<void> {\n  const claudeMdPath = join(projectRoot, 'CLAUDE.md')\n  const patchPath = join(dirname(import.meta.url.replace('file://', '')), '..', 'templates', 'claude-md-patch.md')\n\n  let patch: string\n  try {\n    patch = await readFile(patchPath, 'utf-8')\n  } catch {\n    // Fallback: inline the patch content\n    patch = [\n      '<!-- nogrep -->',\n      '## Code Navigation',\n      '',\n      'This project uses [nogrep](https://github.com/techtulp/nogrep).',\n      'Context files in `.nogrep/` are a navigable index of this codebase.',\n      'When you see nogrep results injected into your context, trust them —',\n      'read those files before exploring source.',\n      '<!-- /nogrep -->',\n    ].join('\\n') + '\\n'\n  }\n\n  let existing = ''\n  try {\n    existing 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package/dist/chunk-SMUAF6SM.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../scripts/types.ts"],"sourcesContent":["// --- Directory / File types ---\n\nexport interface DirectoryNode {\n  name: string\n  path: string\n  type: 'file' | 'directory'\n  children?: DirectoryNode[]\n}\n\nexport interface ManifestFile {\n  path: string\n  type: string\n  depth: number\n}\n\nexport interface ChurnEntry {\n  path: string\n  changes: number\n}\n\nexport interface FileSize {\n  path: string\n  bytes: number\n}\n\n// --- Signal collection ---\n\nexport interface SignalResult {\n  directoryTree: DirectoryNode[]\n  extensionMap: Record<string, number>\n  manifests: ManifestFile[]\n  entryPoints: string[]\n  gitChurn: ChurnEntry[]\n  largeFiles: FileSize[]\n  envFiles: string[]\n  testFiles: string[]\n}\n\n// --- Stack detection ---\n\nexport interface StackConventions {\n  entryPattern: string\n  testPattern: string\n  configLocation: string\n}\n\nexport interface DomainCluster {\n  name: string\n  path: string\n  confidence: number\n}\n\nexport interface StackResult {\n  primaryLanguage: string\n  frameworks: string[]\n  architecture: 'monolith' | 'monorepo' | 'multi-repo' | 'microservice' | 'library'\n  domainClusters: DomainCluster[]\n  conventions: StackConventions\n  stackHints: string\n  dynamicTaxonomy: { domain: string[]; tech: string[] }\n}\n\n// --- Tags ---\n\nexport interface TagSet {\n  domain: string[]\n  layer: string[]\n  tech: string[]\n  concern: string[]\n  type: string[]\n}\n\nexport interface Taxonomy {\n  static: {\n    layer: string[]\n    concern: string[]\n    type: string[]\n  }\n  dynamic: {\n    domain: string[]\n    tech: string[]\n  }\n  custom: Record<string, string[]>\n}\n\n// --- Relations ---\n\nexport interface Relation {\n  id: string\n  reason: string\n}\n\nexport interface ExternalDep {\n  name: string\n  usage: string\n}\n\nexport interface SyncMeta {\n  commit: string\n  timestamp: string\n  srcHash: string\n}\n\n// --- Context nodes ---\n\nexport interface NodeResult {\n  id: string\n  title: string\n  category: 'domain' | 'architecture' | 'flow' | 'entity'\n  tags: TagSet\n  relatesTo: Relation[]\n  inverseRelations: Relation[]\n  srcPaths: string[]\n  keywords: string[]\n  lastSynced: SyncMeta\n  purpose: string\n  publicSurface: string[]\n  doesNotOwn: string[]\n  externalDeps: ExternalDep[]\n  gotchas: string[]\n}\n\n// --- Index ---\n\nexport interface PathEntry {\n  context: string\n  tags: string[]\n}\n\nexport interface IndexJson {\n  version: string\n  generatedAt: string\n  commit: string\n  stack: Pick<StackResult, 'primaryLanguage' | 'frameworks' | 'architecture'>\n  tags: Record<string, string[]>\n  keywords: Record<string, string[]>\n  paths: Record<string, PathEntry>\n}\n\n// --- Registry ---\n\nexport interface RegistryMapping {\n  glob: string\n  contextFile: string\n  watch: boolean\n}\n\nexport interface RegistryJson {\n  mappings: RegistryMapping[]\n}\n\n// --- Query ---\n\nexport interface RankedResult {\n  contextFile: string\n  score: number\n  matchedOn: string[]\n  summary: string\n}\n\n// --- Validation ---\n\nexport interface StaleResult {\n  file: string\n  isStale: boolean\n  reason?: string\n}\n\n// --- Settings ---\n\nexport interface NogrepSettings {\n  enabled: boolean\n}\n\n// --- Errors ---\n\nexport type NogrepErrorCode = 'NO_INDEX' | 'NO_GIT' | 'IO_ERROR' | 'STALE'\n\nexport class NogrepError extends Error {\n  constructor(\n    message: string,\n    public code: NogrepErrorCode,\n  ) {\n    super(message)\n  }\n}\n"],"mappings":";AAkLO,IAAM,cAAN,cAA0B,MAAM;AAAA,EACrC,YACE,SACO,MACP;AACA,UAAM,OAAO;AAFN;AAAA,EAGT;AACF;","names":[]}

package/dist/query.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../scripts/query.ts"],"sourcesContent":["import { readFile } from 'node:fs/promises'\nimport { join, resolve as resolvePath } from 'node:path'\nimport { parseArgs } from 'node:util'\nimport type { IndexJson, RankedResult, Taxonomy } from './types.js'\nimport { NogrepError } from './types.js'\n\n// --- Term extraction ---\n\nexport function extractTerms(\n  question: string,\n  taxonomy: Taxonomy,\n): { tags: string[]; keywords: string[] } {\n  const words = question\n    .toLowerCase()\n    .replace(/[^\\w\\s-]/g, ' ')\n    .split(/\\s+/)\n    .filter(w => w.length > 1)\n\n  const tags: string[] = []\n  const keywords: string[] = []\n\n  // Collect all taxonomy values for matching\n  const tagLookup = new Map<string, string>()\n\n  for (const val of taxonomy.static.layer) {\n    tagLookup.set(val.toLowerCase(), `layer:${val}`)\n  }\n  for (const val of taxonomy.static.concern) {\n    tagLookup.set(val.toLowerCase(), `concern:${val}`)\n  }\n  for (const val of taxonomy.static.type) {\n    tagLookup.set(val.toLowerCase(), `type:${val}`)\n  }\n  for (const val of taxonomy.dynamic.domain) {\n    tagLookup.set(val.toLowerCase(), `domain:${val}`)\n  }\n  for (const val of taxonomy.dynamic.tech) {\n    tagLookup.set(val.toLowerCase(), `tech:${val}`)\n  }\n  for (const [cat, values] of Object.entries(taxonomy.custom)) {\n    for (const val of values) {\n      tagLookup.set(val.toLowerCase(), `${cat}:${val}`)\n    }\n  }\n\n  // Stop words to skip as keywords\n  const stopWords = new Set([\n    'the', 'is', 'at', 'in', 'of', 'on', 'to', 'a', 'an', 'and', 'or',\n    'for', 'it', 'do', 'does', 'how', 'what', 'where', 'which', 'when',\n    'who', 'why', 'this', 'that', 'with', 'from', 'by', 'be', 'as',\n    'are', 'was', 'were', 'been', 'has', 'have', 'had', 'not', 'but',\n    'if', 'my', 'our', 'its', 'can', 'will', 'should', 'would', 'could',\n    'about', 'after', 'work', 'works', 'use', 'uses', 'used',\n  ])\n\n  for (const word of words) {\n    const tag = tagLookup.get(word)\n    if (tag && !tags.includes(tag)) {\n      tags.push(tag)\n    }\n\n    // Also check hyphenated compound matches (e.g. \"error-handling\")\n    if (!tag && !stopWords.has(word)) {\n      keywords.push(word)\n    }\n  }\n\n  // Check for multi-word tag matches (e.g. \"error handling\" → \"error-handling\")\n  const questionLower = question.toLowerCase()\n  for (const [val, tag] of tagLookup.entries()) {\n    if (val.includes('-')) {\n      const spacedVersion = val.replace(/-/g, ' ')\n      if (questionLower.includes(spacedVersion) && !tags.includes(tag)) {\n        tags.push(tag)\n      }\n      if (questionLower.includes(val) && !tags.includes(tag)) {\n        tags.push(tag)\n      }\n    }\n  }\n\n  return { tags, keywords }\n}\n\n// --- Resolution ---\n\nexport function resolveQuery(\n  terms: { tags: string[]; keywords: string[] },\n  index: IndexJson,\n  limit = 5,\n): RankedResult[] {\n  const scoreMap = new Map<string, { score: number; matchedOn: string[] }>()\n\n  function addMatch(contextFile: string, score: number, matchLabel: string): void {\n    const existing = scoreMap.get(contextFile)\n    if (existing) {\n      existing.score += score\n      existing.matchedOn.push(matchLabel)\n    } else {\n      scoreMap.set(contextFile, { score, matchedOn: [matchLabel] })\n    }\n  }\n\n  // Tag matching: +2 per match\n  for (const tag of terms.tags) {\n    const files = index.tags[tag]\n    if (files) {\n      for (const file of files) {\n        addMatch(file, 2, `tag:${tag}`)\n      }\n    }\n  }\n\n  // Keyword matching: +1 per match\n  for (const kw of terms.keywords) {\n    const kwLower = kw.toLowerCase()\n\n    // Direct keyword lookup\n    const files = index.keywords[kwLower]\n    if (files) {\n      for (const file of files) {\n        addMatch(file, 1, `keyword:${kwLower}`)\n      }\n    }\n\n    // Also search all index keywords for partial matches\n    for (const [indexKw, kwFiles] of Object.entries(index.keywords)) {\n      if (indexKw === kwLower) continue // Already handled\n      if (indexKw.includes(kwLower) || kwLower.includes(indexKw)) {\n        for (const file of kwFiles) {\n          addMatch(file, 1, `keyword:${indexKw}`)\n        }\n      }\n    }\n  }\n\n  // Sort by score descending, then alphabetically for ties\n  const results: RankedResult[] = [...scoreMap.entries()]\n    .sort((a, b) => b[1].score - a[1].score || a[0].localeCompare(b[0]))\n    .slice(0, limit)\n    .map(([contextFile, { score, matchedOn }]) => ({\n      contextFile,\n      score,\n      matchedOn: [...new Set(matchedOn)],\n      summary: `Matched: ${[...new Set(matchedOn)].join(', ')}`,\n    }))\n\n  return results\n}\n\n// --- Index + taxonomy loading ---\n\nasync function loadIndex(projectRoot: string): Promise<IndexJson> {\n  const indexPath = join(projectRoot, '.nogrep', '_index.json')\n  try {\n    const content = await readFile(indexPath, 'utf-8')\n    return JSON.parse(content) as IndexJson\n  } catch {\n    throw new NogrepError(\n      'No .nogrep/_index.json found. Run /nogrep:init first.',\n      'NO_INDEX',\n    )\n  }\n}\n\nasync function loadTaxonomy(projectRoot: string): Promise<Taxonomy> {\n  const taxonomyPath = join(projectRoot, '.nogrep', '_taxonomy.json')\n  try {\n    const content = await readFile(taxonomyPath, 'utf-8')\n    return JSON.parse(content) as Taxonomy\n  } catch {\n    // Return default taxonomy if file doesn't exist\n    return {\n      static: {\n        layer: ['presentation', 'business', 'data', 'infrastructure', 'cross-cutting'],\n        concern: ['security', 'performance', 'caching', 'validation', 'error-handling', 'idempotency', 'observability'],\n        type: ['module', 'flow', 'entity', 'integration', 'config', 'ui', 'test'],\n      },\n      dynamic: { domain: [], tech: [] },\n      custom: {},\n    }\n  }\n}\n\nfunction buildTaxonomyFromIndex(index: IndexJson, baseTaxonomy: Taxonomy): Taxonomy {\n  // Extract dynamic domain and tech values from the index tags\n  const domains = new Set<string>(baseTaxonomy.dynamic.domain)\n  const techs = new Set<string>(baseTaxonomy.dynamic.tech)\n\n  for (const tagKey of Object.keys(index.tags)) {\n    const [category, value] = tagKey.split(':')\n    if (!category || !value) continue\n    if (category === 'domain') domains.add(value)\n    if (category === 'tech') techs.add(value)\n  }\n\n  return {\n    ...baseTaxonomy,\n    dynamic: {\n      domain: [...domains],\n      tech: [...techs],\n    },\n  }\n}\n\n// --- Formatting ---\n\nfunction formatPaths(results: RankedResult[]): string {\n  return results.map(r => r.contextFile).join('\\n')\n}\n\nfunction formatJson(results: RankedResult[]): string {\n  return JSON.stringify(results, null, 2)\n}\n\nfunction formatSummary(results: RankedResult[]): string {\n  if (results.length === 0) return 'No matching context files found.'\n  return results\n    .map(r => `- ${r.contextFile} (score: ${r.score}) — ${r.summary}`)\n    .join('\\n')\n}\n\n// --- CLI ---\n\nasync function main(): Promise<void> {\n  const { values } = parseArgs({\n    options: {\n      tags: { type: 'string' },\n      keywords: { type: 'string' },\n      question: { type: 'string' },\n      format: { type: 'string', default: 'json' },\n      limit: { type: 'string', default: '5' },\n      root: { type: 'string', default: process.cwd() },\n    },\n    strict: true,\n  })\n\n  const root = resolvePath(values.root ?? process.cwd())\n  const limit = parseInt(values.limit ?? '5', 10)\n  const format = values.format ?? 'json'\n\n  const index = await loadIndex(root)\n  const baseTaxonomy = await loadTaxonomy(root)\n  const taxonomy = buildTaxonomyFromIndex(index, baseTaxonomy)\n\n  let terms: { tags: string[]; keywords: string[] }\n\n  if (values.question) {\n    terms = extractTerms(values.question, taxonomy)\n  } else if (values.tags || values.keywords) {\n    const tags = values.tags\n      ? values.tags.split(',').map(t => t.trim()).filter(Boolean)\n      : []\n    const keywords = values.keywords\n      ? values.keywords.split(',').map(k => k.trim()).filter(Boolean)\n      : []\n    terms = { tags, keywords }\n  } else {\n    process.stderr.write(\n      JSON.stringify({ error: 'Usage: node query.js --tags <tags> | --keywords <words> | --question <text> [--format paths|json|summary] [--limit N]' }) + '\\n',\n    )\n    process.exitCode = 1\n    return\n  }\n\n  const results = resolveQuery(terms, index, limit)\n\n  switch (format) {\n    case 'paths':\n      process.stdout.write(formatPaths(results) + '\\n')\n      break\n    case 'summary':\n      process.stdout.write(formatSummary(results) + '\\n')\n      break\n    case 'json':\n    default:\n      process.stdout.write(formatJson(results) + '\\n')\n      break\n  }\n}\n\nmain().catch((err: unknown) => {\n  if (err instanceof NogrepError) {\n    process.stderr.write(JSON.stringify({ error: err.message, code: err.code }) + '\\n')\n  } else {\n    const message = err instanceof Error ? err.message : String(err)\n    process.stderr.write(JSON.stringify({ error: message }) + '\\n')\n  }\n  process.exitCode = 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package/dist/settings.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../scripts/settings.ts"],"sourcesContent":["import { readFile, writeFile, mkdir } from 'node:fs/promises'\nimport { join } from 'node:path'\nimport { parseArgs } from 'node:util'\nimport type { NogrepSettings } from './types.js'\n\nconst SETTINGS_FILE = '.claude/settings.json'\nconst SETTINGS_LOCAL_FILE = '.claude/settings.local.json'\n\ninterface SettingsJson {\n  nogrep?: Partial<NogrepSettings>\n  [key: string]: unknown\n}\n\nasync function readJsonFile(path: string): Promise<SettingsJson> {\n  try {\n    const content = await readFile(path, 'utf-8')\n    return JSON.parse(content) as SettingsJson\n  } catch {\n    return {}\n  }\n}\n\nasync function ensureDir(dir: string): Promise<void> {\n  await mkdir(dir, { recursive: true })\n}\n\nexport async function readSettings(projectRoot: string): Promise<NogrepSettings> {\n  const sharedPath = join(projectRoot, SETTINGS_FILE)\n  const localPath = join(projectRoot, SETTINGS_LOCAL_FILE)\n\n  const shared = await readJsonFile(sharedPath)\n  const local = await readJsonFile(localPath)\n\n  const enabled =\n    local.nogrep?.enabled ?? shared.nogrep?.enabled ?? false\n\n  return { enabled }\n}\n\nexport async function writeSettings(\n  projectRoot: string,\n  settings: Partial<NogrepSettings>,\n  local?: boolean,\n): Promise<void> {\n  const filePath = join(\n    projectRoot,\n    local ? SETTINGS_LOCAL_FILE : SETTINGS_FILE,\n  )\n\n  await ensureDir(join(projectRoot, '.claude'))\n\n  const existing = await readJsonFile(filePath)\n  existing.nogrep = { ...existing.nogrep, ...settings }\n\n  await writeFile(filePath, JSON.stringify(existing, null, 2) + '\\n', 'utf-8')\n}\n\n// CLI interface\nasync function main(): Promise<void> {\n  const { values } = parseArgs({\n    options: {\n      set: { type: 'string' },\n      get: { type: 'boolean', default: false },\n      local: { type: 'boolean', default: false },\n      root: { type: 'string', default: process.cwd() },\n    },\n    strict: true,\n  })\n\n  const root = values.root ?? process.cwd()\n\n  if (values.get) {\n    const settings = await readSettings(root)\n    process.stdout.write(JSON.stringify(settings, null, 2) + '\\n')\n    return\n  }\n\n  if (values.set) {\n    const [key, value] = values.set.split('=')\n    if (key === 'enabled') {\n      const enabled = value === 'true'\n      await writeSettings(root, { enabled }, values.local)\n    } else {\n      process.stderr.write(JSON.stringify({ error: `Unknown setting: ${key}` }) + '\\n')\n      process.exitCode = 1\n    }\n    return\n  }\n\n  process.stderr.write(JSON.stringify({ error: 'Usage: node settings.js --set enabled=true [--local] | --get' }) + '\\n')\n  process.exitCode = 1\n}\n\nmain().catch((err: unknown) => {\n  const message = err instanceof Error ? err.message : String(err)\n  process.stderr.write(JSON.stringify({ error: message }) + '\\n')\n  process.exitCode = 1\n})\n"],"mappings":";AAAA,SAAS,UAAU,WAAW,aAAa;AAC3C,SAAS,YAAY;AACrB,SAAS,iBAAiB;AAG1B,IAAM,gBAAgB;AACtB,IAAM,sBAAsB;AAO5B,eAAe,aAAa,MAAqC;AAC/D,MAAI;AACF,UAAM,UAAU,MAAM,SAAS,MAAM,OAAO;AAC5C,WAAO,KAAK,MAAM,OAAO;AAAA,EAC3B,QAAQ;AACN,WAAO,CAAC;AAAA,EACV;AACF;AAEA,eAAe,UAAU,KAA4B;AACnD,QAAM,MAAM,KAAK,EAAE,WAAW,KAAK,CAAC;AACtC;AAEA,eAAsB,aAAa,aAA8C;AAC/E,QAAM,aAAa,KAAK,aAAa,aAAa;AAClD,QAAM,YAAY,KAAK,aAAa,mBAAmB;AAEvD,QAAM,SAAS,MAAM,aAAa,UAAU;AAC5C,QAAM,QAAQ,MAAM,aAAa,SAAS;AAE1C,QAAM,UACJ,MAAM,QAAQ,WAAW,OAAO,QAAQ,WAAW;AAErD,SAAO,EAAE,QAAQ;AACnB;AAEA,eAAsB,cACpB,aACA,UACA,OACe;AACf,QAAM,WAAW;AAAA,IACf;AAAA,IACA,QAAQ,sBAAsB;AAAA,EAChC;AAEA,QAAM,UAAU,KAAK,aAAa,SAAS,CAAC;AAE5C,QAAM,WAAW,MAAM,aAAa,QAAQ;AAC5C,WAAS,SAAS,EAAE,GAAG,SAAS,QAAQ,GAAG,SAAS;AAEpD,QAAM,UAAU,UAAU,KAAK,UAAU,UAAU,MAAM,CAAC,IAAI,MAAM,OAAO;AAC7E;AAGA,eAAe,OAAsB;AACnC,QAAM,EAAE,OAAO,IAAI,UAAU;AAAA,IAC3B,SAAS;AAAA,MACP,KAAK,EAAE,MAAM,SAAS;AAAA,MACtB,KAAK,EAAE,MAAM,WAAW,SAAS,MAAM;AAAA,MACvC,OAAO,EAAE,MAAM,WAAW,SAAS,MAAM;AAAA,MACzC,MAAM,EAAE,MAAM,UAAU,SAAS,QAAQ,IAAI,EAAE;AAAA,IACjD;AAAA,IACA,QAAQ;AAAA,EACV,CAAC;AAED,QAAM,OAAO,OAAO,QAAQ,QAAQ,IAAI;AAExC,MAAI,OAAO,KAAK;AACd,UAAM,WAAW,MAAM,aAAa,IAAI;AACxC,YAAQ,OAAO,MAAM,KAAK,UAAU,UAAU,MAAM,CAAC,IAAI,IAAI;AAC7D;AAAA,EACF;AAEA,MAAI,OAAO,KAAK;AACd,UAAM,CAAC,KAAK,KAAK,IAAI,OAAO,IAAI,MAAM,GAAG;AACzC,QAAI,QAAQ,WAAW;AACrB,YAAM,UAAU,UAAU;AAC1B,YAAM,cAAc,MAAM,EAAE,QAAQ,GAAG,OAAO,KAAK;AAAA,IACrD,OAAO;AACL,cAAQ,OAAO,MAAM,KAAK,UAAU,EAAE,OAAO,oBAAoB,GAAG,GAAG,CAAC,IAAI,IAAI;AAChF,cAAQ,WAAW;AAAA,IACrB;AACA;AAAA,EACF;AAEA,UAAQ,OAAO,MAAM,KAAK,UAAU,EAAE,OAAO,+DAA+D,CAAC,IAAI,IAAI;AACrH,UAAQ,WAAW;AACrB;AAEA,KAAK,EAAE,MAAM,CAAC,QAAiB;AAC7B,QAAM,UAAU,eAAe,QAAQ,IAAI,UAAU,OAAO,GAAG;AAC/D,UAAQ,OAAO,MAAM,KAAK,UAAU,EAAE,OAAO,QAAQ,CAAC,IAAI,IAAI;AAC9D,UAAQ,WAAW;AACrB,CAAC;","names":[]}

package/dist/signals.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../scripts/signals.ts"],"sourcesContent":["import { readdir, stat, readFile } from 'fs/promises'\nimport { join, extname, relative, resolve } from 'path'\nimport { execFile } from 'child_process'\nimport { promisify } from 'util'\nimport type { SignalResult, DirectoryNode, ManifestFile, ChurnEntry, FileSize } from './types.js'\n\nconst execFileAsync = promisify(execFile)\n\nconst SKIP_DIRS = new Set([\n  'node_modules', 'dist', 'build', '.git', 'coverage',\n  '.next', '.nuxt', '__pycache__', '.venv', 'venv',\n  '.idea', '.vscode', '.nogrep',\n])\n\nconst MANIFEST_NAMES: Record<string, string> = {\n  'package.json': 'npm',\n  'requirements.txt': 'pip',\n  'pom.xml': 'maven',\n  'go.mod': 'go',\n  'Podfile': 'cocoapods',\n  'Cargo.toml': 'cargo',\n  'pubspec.yaml': 'flutter',\n  'composer.json': 'composer',\n}\n\nconst ENTRY_NAMES = new Set(['main', 'index', 'app', 'server'])\n\nconst TEST_PATTERNS = [\n  /\\.test\\.\\w+$/,\n  /\\.spec\\.\\w+$/,\n  /_test\\.\\w+$/,\n  /^test_.*\\.py$/,\n]\n\ninterface CollectOptions {\n  exclude?: string[]\n  maxDepth?: number\n}\n\nexport async function collectSignals(\n  root: string,\n  options: CollectOptions = {},\n): Promise<SignalResult> {\n  const absRoot = resolve(root)\n  const maxDepth = options.maxDepth ?? 4\n  const extraSkip = new Set(options.exclude ?? 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package/dist/trim.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../scripts/trim.ts"],"sourcesContent":["import { readFile } from 'fs/promises'\nimport { resolve, extname, basename } from 'path'\n\nconst MAX_CLUSTER_LINES = 300\n\ninterface TrimOptions {\n  maxLines?: number\n}\n\n// Language-agnostic regex patterns for stripping function/method bodies\n// Strategy: find opening braces after signatures, track depth, remove body content\n\nfunction trimTypeScript(content: string): string {\n  const lines = content.split('\\n')\n  const result: string[] = []\n  let braceDepth = 0\n  let inBody = false\n  let bodyStartDepth = 0\n\n  for (const line of lines) {\n    const trimmed = line.trim()\n\n    // Always keep: empty lines at top level, imports, type/interface, decorators, exports of types\n    if (braceDepth === 0 || !inBody) {\n      if (\n        trimmed === '' ||\n        trimmed.startsWith('import ') ||\n        trimmed.startsWith('export type ') ||\n        trimmed.startsWith('export interface ') ||\n        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') ||\n        trimmed.startsWith('public enum ') ||\n        trimmed.startsWith('enum ')\n      ) {\n        result.push(line)\n        braceDepth += countChar(trimmed, '{') - countChar(trimmed, '}')\n        continue\n      }\n    }\n\n    const openBraces = countChar(trimmed, '{')\n    const closeBraces = countChar(trimmed, '}')\n\n    if (!inBody) {\n      if (isJavaMethodSignature(trimmed) && openBraces > closeBraces) {\n        result.push(line)\n        braceDepth += openBraces - closeBraces\n        inBody = true\n        bodyStartDepth = braceDepth\n        continue\n      }\n\n      if (isJavaClassLine(trimmed)) {\n        result.push(line)\n        braceDepth += openBraces - closeBraces\n        continue\n      }\n\n      result.push(line)\n      braceDepth += openBraces - closeBraces\n    } else {\n      braceDepth += openBraces - closeBraces\n      if (braceDepth < bodyStartDepth) {\n        result.push(line)\n        inBody = false\n      }\n    }\n  }\n\n  return result.join('\\n')\n}\n\nfunction trimGeneric(content: string): string {\n  // For unknown languages, just return as-is (truncation handles size)\n  return content\n}\n\n// --- Helpers ---\n\nfunction countChar(s: string, ch: string): number {\n  let count = 0\n  let inString = false\n  let stringChar = ''\n  for (let i = 0; i < s.length; i++) {\n    const c = s[i]!\n    if (inString) {\n      if (c === stringChar && s[i - 1] !== '\\\\') inString = false\n    } else if (c === '\"' || c === \"'\" || c === '`') {\n      inString = true\n      stringChar = c\n    } else if (c === ch) {\n      count++\n    }\n  }\n  return count\n}\n\nfunction isSignatureLine(trimmed: string): boolean {\n  return /^(export\\s+)?(async\\s+)?function\\s/.test(trimmed) ||\n    /^(public|private|protected|static|async|get|set|\\*)\\s/.test(trimmed) ||\n    /^(readonly\\s+)?[a-zA-Z_$][a-zA-Z0-9_$]*\\s*\\(/.test(trimmed) ||\n    /^(export\\s+)?(const|let|var)\\s+\\w+\\s*=\\s*(async\\s+)?\\(/.test(trimmed) ||\n    /^(export\\s+)?(const|let|var)\\s+\\w+\\s*=\\s*(async\\s+)?function/.test(trimmed) ||\n    // Arrow function assigned at class level\n    /^[a-zA-Z_$][a-zA-Z0-9_$]*\\s*=\\s*(async\\s+)?\\(/.test(trimmed)\n}\n\nfunction isClassOrInterfaceLine(trimmed: string): boolean {\n  return /^(export\\s+)?(abstract\\s+)?(class|interface|enum)\\s/.test(trimmed) ||\n    /^(export\\s+)?namespace\\s/.test(trimmed)\n}\n\nfunction isJavaMethodSignature(trimmed: string): boolean {\n  return /^(public|private|protected|static|final|abstract|synchronized|native)\\s/.test(trimmed) &&\n    /\\(/.test(trimmed)\n}\n\nfunction isJavaClassLine(trimmed: string): boolean {\n  return /^(public|private|protected)?\\s*(abstract\\s+)?(class|interface|enum)\\s/.test(trimmed)\n}\n\nfunction findDocstring(lines: string[], startIdx: number, defIndent: number): number {\n  // Find Python docstring (triple-quoted) after a def\n  for (let i = startIdx; i < lines.length; i++) {\n    const trimmed = lines[i]!.trim()\n    if (trimmed === '') continue\n    if (trimmed.startsWith('\"\"\"') || trimmed.startsWith(\"'''\")) {\n      const quote = trimmed.slice(0, 3)\n      // Single-line docstring\n      if (trimmed.length > 3 && trimmed.endsWith(quote)) return i\n      // Multi-line docstring — find closing\n      for (let j = i + 1; j < lines.length; j++) {\n        if (lines[j]!.trim().endsWith(quote)) return j\n      }\n      return i\n    }\n    // First non-empty line after def is not a docstring\n    return startIdx - 1\n  }\n  return startIdx - 1\n}\n\nfunction getTrimmer(filePath: string): (content: string) => string {\n  const ext = extname(filePath).toLowerCase()\n  switch (ext) {\n    case '.ts':\n    case '.tsx':\n    case '.js':\n    case '.jsx':\n    case '.mjs':\n    case '.cjs':\n      return trimTypeScript\n    case '.py':\n      return trimPython\n    case '.java':\n    case '.kt':\n    case '.kts':\n    case '.scala':\n    case '.groovy':\n      return trimJava\n    case '.go':\n    case '.rs':\n    case '.c':\n    case '.cpp':\n    case '.h':\n    case '.hpp':\n    case '.cs':\n    case '.swift':\n    case '.dart':\n      return trimJava // brace-based languages use same strategy\n    default:\n      return trimGeneric\n  }\n}\n\nexport async function trimCluster(paths: string[], projectRoot: string): Promise<string> {\n  const results: Array<{ path: string; content: string; lines: number }> = []\n\n  for (const filePath of paths) {\n    const absPath = resolve(projectRoot, filePath)\n    try {\n      const raw = await readFile(absPath, 'utf-8')\n      const trimmer = getTrimmer(filePath)\n      const trimmed = trimmer(raw)\n      results.push({\n        path: filePath,\n        content: trimmed,\n        lines: trimmed.split('\\n').length,\n      })\n    } catch {\n      // Skip files that can't be read\n      if (process.env['NOGREP_DEBUG'] === '1') {\n        process.stderr.write(`[nogrep] Could not read: ${absPath}\\n`)\n      }\n    }\n  }\n\n  // Sort by line 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trim.js <path1> <path2> ...\\n')\n    process.exit(1)\n  }\n\n  const projectRoot = process.cwd()\n  const result = await trimCluster(args, projectRoot)\n  process.stdout.write(result)\n}\n\nconst isDirectRun = process.argv[1]?.endsWith('trim.js') || process.argv[1]?.endsWith('trim.ts')\nif (isDirectRun) {\n  main().catch((err: unknown) => {\n    process.stderr.write(`Error: ${err instanceof Error ? err.message : String(err)}\\n`)\n    process.exit(1)\n  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package/dist/types.js

@@ -1,7 +0,0 @@
-import {
-  NogrepError
-} from "./chunk-SMUAF6SM.js";
-export {
-  NogrepError
-};
-//# sourceMappingURL=types.js.map

package/dist/validate.js.map

@@ -1 +0,0 @@
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package/dist/write.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../scripts/write.ts"],"sourcesContent":["import { readFile, writeFile, mkdir, readdir } from 'node:fs/promises'\nimport { join, resolve, dirname } from 'node:path'\nimport { execFile } from 'node:child_process'\nimport { promisify } from 'node:util'\nimport { createHash } from 'node:crypto'\nimport { glob } from 'glob'\nimport matter from 'gray-matter'\nimport yaml from 'js-yaml'\nimport type {\n  NodeResult,\n  StackResult,\n  IndexJson,\n  RegistryJson,\n  PathEntry,\n  NogrepError,\n} from './types.js'\n\nconst execFileAsync = promisify(execFile)\n\n// --- Manual Notes preservation ---\n\nfunction extractManualNotes(content: string): string {\n  const match = content.match(\n    /## Manual Notes\\n([\\s\\S]*?)(?=\\n## |\\n---|\\s*$)/,\n  )\n  return match ? match[1]!.trim() : ''\n}\n\n// --- Context node markdown generation ---\n\nfunction buildNodeFrontmatter(node: NodeResult): Record<string, unknown> {\n  return {\n    id: node.id,\n    title: node.title,\n    category: node.category,\n    tags: {\n      domain: node.tags.domain,\n      layer: node.tags.layer,\n      tech: node.tags.tech,\n      concern: node.tags.concern,\n      type: node.tags.type,\n    },\n    relates_to: node.relatesTo.map(r => ({ id: r.id, reason: r.reason })),\n    inverse_relations: node.inverseRelations.map(r => ({ id: r.id, reason: r.reason })),\n    src_paths: node.srcPaths,\n    keywords: node.keywords,\n    last_synced: {\n      commit: node.lastSynced.commit,\n      timestamp: node.lastSynced.timestamp,\n      src_hash: node.lastSynced.srcHash,\n    },\n  }\n}\n\nfunction buildNodeMarkdown(node: NodeResult, manualNotes: string): string {\n  const fm = buildNodeFrontmatter(node)\n  const yamlStr = yaml.dump(fm, { lineWidth: -1, quotingType: '\"', forceQuotes: false })\n\n  const sections: string[] = []\n  sections.push(`---\\n${yamlStr.trimEnd()}\\n---`)\n\n  sections.push(`\\n## Purpose\\n${node.purpose}`)\n\n  if (node.publicSurface.length > 0) {\n    sections.push(`\\n## Public Surface\\n\\n\\`\\`\\`\\n${node.publicSurface.join('\\n')}\\n\\`\\`\\``)\n  }\n\n  if (node.doesNotOwn.length > 0) {\n    sections.push(`\\n## Does Not Own\\n${node.doesNotOwn.map(d => `- ${d}`).join('\\n')}`)\n  }\n\n  if (node.gotchas.length > 0) {\n    sections.push(`\\n## Gotchas\\n${node.gotchas.map(g => `- ${g}`).join('\\n')}`)\n  }\n\n  const notesContent = manualNotes || '_Human annotations. Never overwritten by nogrep update._'\n  sections.push(`\\n## Manual Notes\\n${notesContent}`)\n\n  return sections.join('\\n') + '\\n'\n}\n\n// --- Write context files ---\n\nfunction categoryDir(category: NodeResult['category']): string {\n  switch (category) {\n    case 'domain': return 'domains'\n    case 'architecture': return 'architecture'\n    case 'flow': return 'flows'\n    case 'entity': return 'entities'\n  }\n}\n\nexport async function writeContextNodes(\n  nodes: NodeResult[],\n  outputDir: string,\n): Promise<void> {\n  for (const node of nodes) {\n    const dir = join(outputDir, categoryDir(node.category))\n    await mkdir(dir, { recursive: true })\n\n    const filePath = join(dir, `${node.id}.md`)\n\n    // Preserve existing manual notes\n    let manualNotes = ''\n    try {\n      const existing = await readFile(filePath, 'utf-8')\n      manualNotes = extractManualNotes(existing)\n    } catch {\n      // File doesn't exist yet\n    }\n\n    const content = buildNodeMarkdown(node, manualNotes)\n    await writeFile(filePath, content, 'utf-8')\n  }\n}\n\n// --- Build index ---\n\nexport function buildIndex(\n  nodes: NodeResult[],\n  stack: Pick<StackResult, 'primaryLanguage' | 'frameworks' | 'architecture'>,\n): IndexJson {\n  const tags: Record<string, string[]> = {}\n  const keywords: Record<string, string[]> = {}\n  const paths: Record<string, PathEntry> = {}\n\n  // Populate inverse relations\n  const inverseMap = new Map<string, Array<{ fromId: string; reason: string }>>()\n  for (const node of nodes) {\n    for (const rel of node.relatesTo) {\n      const existing = inverseMap.get(rel.id) ?? []\n      existing.push({ fromId: node.id, reason: rel.reason })\n      inverseMap.set(rel.id, existing)\n    }\n  }\n\n  for (const node of nodes) {\n    const contextFile = `.nogrep/${categoryDir(node.category)}/${node.id}.md`\n\n    // Merge inverse relations from the map\n    const inverseEntries = inverseMap.get(node.id) ?? []\n    for (const inv of inverseEntries) {\n      if (!node.inverseRelations.some(r => r.id === inv.fromId)) {\n        node.inverseRelations.push({ id: inv.fromId, reason: inv.reason })\n      }\n    }\n\n    // Build tag index\n    const tagCategories: Array<[string, string[]]> = [\n      ['domain', node.tags.domain],\n      ['layer', node.tags.layer],\n      ['tech', node.tags.tech],\n      ['concern', node.tags.concern],\n      ['type', node.tags.type],\n    ]\n\n    const flatTags: string[] = []\n    for (const [cat, values] of tagCategories) {\n      for (const val of values) {\n        const tagKey = `${cat}:${val}`\n        flatTags.push(tagKey)\n        const tagList = tags[tagKey] ?? []\n        if (!tagList.includes(contextFile)) {\n          tagList.push(contextFile)\n        }\n        tags[tagKey] = tagList\n      }\n    }\n\n    // Build keyword index\n    for (const kw of node.keywords) {\n      const kwList = keywords[kw] ?? 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`.nogrep/${categoryDir(node.category)}/${node.id}.md`,\n      watch: true,\n    })),\n  )\n\n  return { mappings }\n}\n\n// --- Patch CLAUDE.md ---\n\nexport async function patchClaudeMd(projectRoot: string): Promise<void> {\n  const claudeMdPath = join(projectRoot, 'CLAUDE.md')\n  const patchPath = join(dirname(import.meta.url.replace('file://', '')), '..', 'templates', 'claude-md-patch.md')\n\n  let patch: string\n  try {\n    patch = await readFile(patchPath, 'utf-8')\n  } catch {\n    // Fallback: inline the patch content\n    patch = [\n      '<!-- nogrep -->',\n      '## Code Navigation',\n      '',\n      'This project uses [nogrep](https://github.com/techtulp/nogrep).',\n      'Context files in `.nogrep/` are a navigable index of this codebase.',\n      'When you see nogrep results injected into your context, trust them —',\n      'read those files before exploring source.',\n      '<!-- /nogrep -->',\n    ].join('\\n') + '\\n'\n  }\n\n  let existing = ''\n  try {\n    existing 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