nodedex 0.1.0

package/dist/tools/helpers.js

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+// ─── Shared response helpers ─────────────────────────────────────
+export function ok(data) {
+    return {
+        content: [{ type: "text", text: JSON.stringify({ success: true, data }) }],
+    };
+}
+export function err(code, message, extra) {
+    return {
+        content: [{ type: "text", text: JSON.stringify({ success: false, error: { code, message, ...extra } }) }],
+    };
+}
+// cosineSim now lives in engine/vector-math.ts (single source). Re-exported here
+// so existing `import { cosineSim } from "./helpers.js"` call sites keep working.
+export { cosineSim } from "../engine/vector-math.js";
+import { CAUSAL_TRAVERSAL_RELS } from "../relation-sets.js";
+// Scale guard: cap how many linked chains we surface. The connected component is
+// naturally small at chain granularity (an incident ≈ 6 chains), but a long-lived
+// project could grow one big component — so we rank by distance and cap.
+const LINKED_CHAINS_CAP = 12;
+/**
+ * assembleBlockChains — "surface the chain AND its linked path, not the bare block."
+ *
+ * A block's meaning in a cause-and-effect store lives in the causal ARC it sits
+ * on. So a single `workspace_get` returns:
+ *   - `chains`        — the named Pass-5 chain(s) the block belongs to (its own arc).
+ *   - `linked_chains` — every OTHER chain reachable by a causal PATH from those
+ *                       chains (the connected component), with hop-`distance` and
+ *                       the bridging relation. This is "everything linked back to
+ *                       this block" — the whole relevant story, NOT the whole root
+ *                       (unrelated islands in the same project are excluded).
+ *
+ * Why CHAIN-level, not block-level: a ±N block BFS floods (one anchor reached 40%
+ * of a root in testing). Walking the CHAIN graph instead (chains = nodes, causal
+ * bridges = edges) keeps the same incident at ~6 nodes — the whole linked story,
+ * digestible. Distance-ranked + capped (LINKED_CHAINS_CAP) for the scale edge;
+ * anything past the cap is reached by NAVIGATING (each linked chain is itself a
+ * get-able anchor). Bound is on what's PUSHED, never on what's REACHABLE.
+ *
+ * Reads `member_of` (many-to-many) NOT the lossy `chain_id` column, so a HINGE
+ * block (member of >1 chain) keeps all its memberships. Only CAUSAL_TRAVERSAL_RELS
+ * bridge chains — NOT part_of / member_of / related_to / contradicts.
+ *
+ * Portable, server-side equivalent of the Claude-Code chain-injection hook — it
+ * rides the tool RESULT, so it works on ANY MCP host.
+ */
+export function assembleBlockChains(db, block) {
+    // A chain block itself → its own arc. Any other block → the chain(s) it is a
+    // member_of (member_of is non-bidirectional → only ever an OUTGOING relation).
+    const ownChainIds = block.type === "chain"
+        ? [block.id]
+        : db.getRelations(block.id)
+            .filter((r) => r.direction === "outgoing" && r.type === "member_of")
+            .map((r) => r.target_id);
+    const own = [...new Set(ownChainIds)];
+    if (own.length === 0)
+        return { chains: [], linked_chains: [] };
+    // Graph data — fetched ONCE, only when the block is on a chain.
+    const allRels = db.getAllRelations(false);
+    const memberOf = new Map(); // blockId → chains it belongs to
+    for (const r of allRels) {
+        if (r.type !== "member_of")
+            continue;
+        if (!memberOf.has(r.source_id))
+            memberOf.set(r.source_id, new Set());
+        memberOf.get(r.source_id).add(r.target_id);
+    }
+    // Build the CHAIN graph (undirected — a "linked path" can run either causal
+    // direction): chainId → neighbourChainId → the relation that first bridges them.
+    const chainGraph = new Map();
+    const link = (a, b, via) => {
+        if (a === b)
+            return;
+        if (!chainGraph.has(a))
+            chainGraph.set(a, new Map());
+        if (!chainGraph.get(a).has(b))
+            chainGraph.get(a).set(b, via);
+    };
+    for (const r of allRels) {
+        if (!CAUSAL_TRAVERSAL_RELS.has(r.type))
+            continue;
+        const sc = memberOf.get(r.source_id);
+        const tc = memberOf.get(r.target_id);
+        if (!sc || !tc)
+            continue;
+        for (const a of sc)
+            for (const b of tc) {
+                link(a, b, r.type);
+                link(b, a, r.type);
+            }
+    }
+    // The block's OWN chains, full detail.
+    const chains = [];
+    for (const chainId of own) {
+        const cb = db.getBlock(chainId);
+        if (!cb || cb.type !== "chain")
+            continue;
+        let content = {};
+        try {
+            content = JSON.parse(cb.content);
+        }
+        catch { /* malformed → empty */ }
+        const unique = content.unique || {};
+        chains.push({
+            label: cb.label,
+            essence: cb.essence,
+            arc: unique.arc ?? null,
+            conclusion: unique.conclusion ?? null,
+            // cause-first order via getBlocksByChain (chain_id column, created_at ASC),
+            // WITH each member's essence — the whole arc readable in this one call.
+            members: db.getBlocksByChain(cb.id).map((m) => ({ label: m.label, type: m.type, essence: m.essence })),
+        });
+    }
+    // Multi-source BFS over the chain graph from ALL the block's own chains →
+    // every chain on a linked path, with its min hop-distance + bridging relation.
+    const ownSet = new Set(own);
+    const dist = new Map();
+    const via = new Map();
+    const queue = [];
+    for (const c of own) {
+        dist.set(c, 0);
+        queue.push(c);
+    }
+    while (queue.length) {
+        const cur = queue.shift();
+        const d = dist.get(cur);
+        for (const [nb, rel] of chainGraph.get(cur) ?? []) {
+            if (!dist.has(nb)) {
+                dist.set(nb, d + 1);
+                via.set(nb, rel);
+                queue.push(nb);
+            }
+        }
+    }
+    const linked_chains = [...dist.entries()]
+        .filter(([id]) => !ownSet.has(id))
+        .sort((a, b) => a[1] - b[1]) // nearest first
+        .slice(0, LINKED_CHAINS_CAP)
+        .map(([id, d]) => {
+        const cb = db.getBlock(id);
+        let conclusion = null;
+        try {
+            conclusion = JSON.parse(cb?.content ?? "{}")?.unique?.conclusion ?? null;
+        }
+        catch { /* ignore */ }
+        return { chain: cb?.label ?? id, essence: cb?.essence ?? "", conclusion, distance: d, via: via.get(id) };
+    });
+    return { chains, linked_chains };
+}
+/**
+ * filterRootsByConcepts — the COLD-START orientation filter ("amnesia move").
+ *
+ * When the agent has NO anchor, it distills its current context into first-
+ * principle concept terms and asks "which root(s) are relevant?" This returns
+ * ranked ROOT suggestions (each with its pre-made description + the blocks that
+ * matched = entry points), so the agent opens one → gets an anchor → the chain-
+ * fold (assembleBlockChains) takes over.
+ *
+ * Matches over TWO cheap, structured fields — NOT the surface:
+ *   1. concepts[]   — the abstract tag net (db.conceptSearch, cross-domain).
+ *   2. strict label — the address; its segments carry concept/entity/PROJECT, so
+ *                     a label hit also resolves the root for free.
+ * It deliberately does NOT scan essence/content (those are LIKE full-scans and
+ * re-introduce the surface search). essence is READ (for display), never filtered.
+ *
+ * Returns SUGGESTIONS, never "the" root — the system surfaces, the agent navigates.
+ */
+export function filterRootsByConcepts(db, terms, opts) {
+    const limit = opts?.limit ?? 8;
+    const entriesPerRoot = opts?.entriesPerRoot ?? 3;
+    const cleanTerms = [...new Set(terms.map((t) => t.trim().toLowerCase()).filter((t) => t.length > 1))];
+    if (cleanTerms.length === 0)
+        return [];
+    // block id → which query terms it covers (concept hit OR label hit)
+    const hits = new Map();
+    const addHit = (block, term) => {
+        const e = hits.get(block.id);
+        if (e)
+            e.terms.add(term);
+        else
+            hits.set(block.id, { block, terms: new Set([term]) });
+    };
+    // 1. concepts[] — the abstract-tag net (indexed, json_each)
+    for (const term of cleanTerms) {
+        for (const { block } of db.conceptSearch([term]).values())
+            addHit(block, term);
+    }
+    // 2. strict label — structured address. Match the term against the block's OWN
+    //    segments (entity/type/concept), NOT the repeated {project} prefix — else a
+    //    project-name term (e.g. "latency" in "…-latency-incident") matches every
+    //    block in the project and drowns the signal. The root is still found via
+    //    its OWN label (a top root has no project prefix to strip).
+    const all = db.getAllBlocks();
+    const byId = new Map(all.map((b) => [b.id, b]));
+    for (const block of all) {
+        const projLabel = block.project_id ? byId.get(block.project_id)?.label?.toLowerCase() : undefined;
+        let local = (block.label || "").toLowerCase();
+        if (projLabel && local.startsWith(projLabel + "_"))
+            local = local.slice(projLabel.length + 1);
+        for (const term of cleanTerms)
+            if (local.includes(term))
+                addHit(block, term);
+    }
+    if (hits.size === 0)
+        return [];
+    // Resolve any block to its TOP project root (walk project_id up the chain).
+    const topRoot = (block) => {
+        let cur = block;
+        const seen = new Set();
+        while (cur.project_id && byId.has(cur.project_id) && !seen.has(cur.project_id)) {
+            seen.add(cur.project_id);
+            cur = byId.get(cur.project_id);
+        }
+        return cur;
+    };
+    // Aggregate hits up to their root.
+    const roots = new Map();
+    for (const { block, terms: bterms } of hits.values()) {
+        const r = topRoot(block);
+        if (r.type !== "project")
+            continue; // only suggest project roots
+        const e = roots.get(r.id) ?? { root: r, terms: new Set(), entries: [] };
+        for (const t of bterms)
+            e.terms.add(t);
+        if (block.id !== r.id)
+            e.entries.push({ block, terms: bterms }); // the root itself isn't an "entry"
+        roots.set(r.id, e);
+    }
+    // Rank roots: most query-terms covered first, then most matching blocks.
+    return [...roots.values()]
+        .sort((a, b) => b.terms.size - a.terms.size || b.entries.length - a.entries.length)
+        .slice(0, limit)
+        .map((r) => ({
+        root: r.root.label,
+        description: r.root.essence || "",
+        terms_matched: [...r.terms].sort(),
+        match_count: r.entries.length,
+        entries: r.entries
+            .sort((a, b) => b.terms.size - a.terms.size)
+            .slice(0, entriesPerRoot)
+            .map((e) => ({ label: e.block.label, type: e.block.type })),
+    }));
+}
+//# sourceMappingURL=helpers.js.map

package/dist/tools/helpers.js.map

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package/dist/tools/projects.d.ts

@@ -0,0 +1,5 @@
+import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
+import { WorkspaceDB } from "../store/database.js";
+import { EmbeddingEngine } from "../engine/embeddings.js";
+export declare function registerProjectTools(server: McpServer, db: WorkspaceDB, _embeddings: EmbeddingEngine): void;
+//# sourceMappingURL=projects.d.ts.map

package/dist/tools/projects.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"projects.d.ts","sourceRoot":"","sources":["../../src/tools/projects.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAEpE,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAC;AACnD,OAAO,EAAE,eAAe,EAAE,MAAM,yBAAyB,CAAC;AAG1D,wBAAgB,oBAAoB,CAAC,MAAM,EAAE,SAAS,EAAE,EAAE,EAAE,WAAW,EAAE,WAAW,EAAE,eAAe,GAAG,IAAI,CA8M3G"}

package/dist/tools/projects.js

@@ -0,0 +1,175 @@
+import { z } from "zod";
+import { ok, err } from "./helpers.js";
+export function registerProjectTools(server, db, _embeddings) {
+    // ─── Tool: workspace_project_create ──────────────────────────────
+    server.tool("workspace_project_create", `Create a new project space in the workspace. Automatically creates a project block.`, {
+        name: z.string().describe("Project name (lowercase, unspaced)"),
+        description: z.string().optional().describe("What the project is about"),
+    }, async (params) => {
+        try {
+            const block = db.createBlock({
+                label: params.name,
+                type: "project",
+                essence: params.description || `Project: ${params.name}`,
+                ttl: "permanent",
+            });
+            db.createProjectLog(params.name, "Project created.");
+            return ok({
+                project: params.name,
+                block_id: block.id,
+                status: "created",
+            });
+        }
+        catch (error) {
+            return err("PROJECT_CREATE_FAILED", String(error));
+        }
+    });
+    // ─── Tool: workspace_project_log ─────────────────────────────────
+    server.tool("workspace_project_log", `Add a journal entry to a project's activity log.`, {
+        project: z.string().describe("Project name"),
+        entry: z.string().describe("Log entry describing what happened or was decided"),
+    }, async (params) => {
+        try {
+            const log = db.createProjectLog(params.project, params.entry);
+            return ok({
+                project: params.project,
+                entry_id: log.id,
+                logged: true,
+            });
+        }
+        catch (error) {
+            return err("PROJECT_LOG_FAILED", String(error));
+        }
+    });
+    // ─── Tool: workspace_project_status ──────────────────────────────
+    server.tool("workspace_project_status", `Get the current state of a project: recent activity and key blocks.`, {
+        project: z.string().describe("Project name"),
+    }, async (params) => {
+        try {
+            const logs = db.getProjectLogs(params.project, 5);
+            const blocks = db.getProjectBlocks(params.project);
+            const projectBlock = db.getBlock(params.project);
+            if (!projectBlock && blocks.length === 0 && logs.length === 0) {
+                return err("PROJECT_NOT_FOUND", `Project '${params.project}' has no logs or blocks.`);
+            }
+            return ok({
+                project: params.project,
+                metadata: projectBlock ? { id: projectBlock.id, essence: projectBlock.essence } : null,
+                recent_activity: logs,
+                associated_blocks: blocks.map(b => ({ id: b.id, label: b.label, type: b.type, essence: b.essence })),
+            });
+        }
+        catch (error) {
+            return err("PROJECT_STATUS_FAILED", String(error));
+        }
+    });
+    // ─── Tool: workspace_project_resume ──────────────────────────────
+    server.tool("workspace_project_resume", `Resume a project session — returns a full briefing so the agent can pick up exactly where it left off.
+Returns: open tasks, key decisions, active constraints, recent activity, and derived insights.
+Call this ONCE at the start of a new conversation, before workspace_auto_recall.
+
+Pass 'since' to get a delta of what changed since your last session:
+  workspace_project_resume({ project: "wmcs", since: "2026-03-15T10:00:00Z" })
+Returns new blocks, updated blocks, and a history summary — so you know what happened while you were away.`, {
+        project: z.string().describe("Project name"),
+        since: z.string().optional().describe("ISO timestamp — return a delta of what changed since this time"),
+    }, async (params) => {
+        try {
+            const logs = db.getProjectLogs(params.project, 10);
+            let blocks = db.getProjectBlocks(params.project);
+            // Fallback: if sparse project links, supplement with recently active blocks
+            if (blocks.filter((b) => b.type !== "project").length < 3) {
+                const recent = db.getRecentBlocks(15);
+                const existingIds = new Set(blocks.map((b) => b.id));
+                blocks = [...blocks, ...recent.filter((b) => !existingIds.has(b.id))];
+            }
+            // Parse content safely
+            const parsed = blocks.map((b) => {
+                let content = {};
+                try {
+                    content = JSON.parse(b.content);
+                }
+                catch { /* ignore */ }
+                return { ...b, _content: content };
+            });
+            // Bucket by type — agent needs different things for different types
+            const tasks = parsed.filter((b) => b.type === "task");
+            const decisions = parsed.filter((b) => b.type === "decision");
+            const constraints = parsed.filter((b) => b.type === "constraint");
+            const derived = parsed.filter((b) => b._content?.derivation);
+            const other = parsed.filter((b) => !["task", "decision", "constraint", "project"].includes(b.type) && !b._content?.derivation);
+            // Summarise helper — strips DB noise, keeps what the agent needs
+            const summarise = (b) => ({
+                id: b.id,
+                label: b.label,
+                type: b.type,
+                essence: b.essence,
+                unique: b._content.unique || undefined,
+                has: b._content.has || undefined,
+                concepts: b._content.concepts || undefined,
+                created_at: b.created_at,
+                updated_at: b.updated_at !== b.created_at ? b.updated_at : undefined,
+                created_by: b.created_by || undefined,
+            });
+            // Open tasks only (not archived/done)
+            const openTasks = tasks.filter((t) => {
+                const status = t._content?.unique?.status;
+                return !status || !["done", "completed", "archived"].includes(status.toLowerCase());
+            });
+            // ── Session delta (since param) ──────────────────────────────
+            let since_last_session;
+            if (params.since) {
+                const sinceMs = new Date(params.since).getTime();
+                const allBlocks = db.getAllBlocks();
+                const newBlocks = allBlocks.filter((b) => new Date(b.created_at).getTime() > sinceMs);
+                const updatedBlocks = allBlocks.filter((b) => new Date(b.updated_at).getTime() > sinceMs &&
+                    new Date(b.created_at).getTime() <= sinceMs);
+                const recentHistory = db.getHistory(undefined, 100).filter((h) => new Date(h.changed_at).getTime() > sinceMs);
+                since_last_session = {
+                    since: params.since,
+                    new_blocks: newBlocks.map((b) => ({
+                        id: b.id, label: b.label, type: b.type, essence: b.essence, created_at: b.created_at,
+                    })),
+                    updated_blocks: updatedBlocks.map((b) => ({
+                        id: b.id, label: b.label, type: b.type, essence: b.essence, updated_at: b.updated_at,
+                    })),
+                    change_log: recentHistory.slice(0, 30).map((h) => ({
+                        block_id: h.block_id, field: h.field_changed, at: h.changed_at, by: h.changed_by,
+                    })),
+                    summary: {
+                        new_blocks: newBlocks.length,
+                        updated_blocks: updatedBlocks.length,
+                        changes: recentHistory.length,
+                    },
+                };
+            }
+            return ok({
+                project: params.project,
+                resume_briefing: {
+                    open_tasks: openTasks.map(summarise),
+                    key_decisions: decisions.map(summarise),
+                    constraints: constraints.map(summarise),
+                    derived_insights: derived.slice(0, 5).map((b) => ({
+                        id: b.id,
+                        label: b.label,
+                        essence: b.essence,
+                        reasoning: b._content.derivation?.logic || undefined,
+                    })),
+                    other_blocks: other.slice(0, 10).map(summarise),
+                },
+                recent_activity: logs.map((l) => ({ at: l.created_at, entry: l.entry })),
+                ...(since_last_session ? { since_last_session } : {}),
+                summary: {
+                    total_blocks: blocks.length,
+                    open_tasks: openTasks.length,
+                    decisions: decisions.length,
+                    constraints: constraints.length,
+                },
+            });
+        }
+        catch (error) {
+            return err("PROJECT_RESUME_FAILED", String(error));
+        }
+    });
+}
+//# sourceMappingURL=projects.js.map

package/dist/tools/projects.js.map

@@ -0,0 +1 @@
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package/dist/tools/system.d.ts

@@ -0,0 +1,5 @@
+import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
+import { WorkspaceDB } from "../store/database.js";
+import { EmbeddingEngine } from "../engine/embeddings.js";
+export declare function registerSystemTools(server: McpServer, db: WorkspaceDB, embeddings: EmbeddingEngine): void;
+//# sourceMappingURL=system.d.ts.map

package/dist/tools/system.d.ts.map

@@ -0,0 +1 @@
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