nmr-processing 9.7.9-pre.1690349439 → 9.8.1

package/lib/constants/degreeToRadians.d.ts

@@ -0,0 +1 @@
+export declare const degreeToRadians: number;

package/lib/constants/degreeToRadians.js

@@ -0,0 +1,5 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.degreeToRadians = void 0;
+exports.degreeToRadians = Math.PI / 180;
+//# sourceMappingURL=degreeToRadians.js.map

package/lib/constants/degreeToRadians.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"degreeToRadians.js","sourceRoot":"","sources":["../../src/constants/degreeToRadians.ts"],"names":[],"mappings":";;;AAAa,QAAA,eAAe,GAAG,IAAI,CAAC,EAAE,GAAG,GAAG,CAAC"}

package/lib/datum/data2d/filter2d/fftDimension1.js

@@ -1,7 +1,6 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.reduce = exports.isApplicable = exports.apply = exports.DOMAIN_UPDATE_RULES = exports.name = exports.id = void 0;
-const quadrature_1 = require("../../../xyz/quadrature");
 const fftDirectDimension_1 = require("../../../xyz/util/fft2d/fftDirectDimension");
 const ml_spectra_processing_1 = require("ml-spectra-processing");
 exports.id = 'fftDimension1';
@@ -16,10 +15,15 @@ function apply(datum2D, options) {
     }
     // eslint-disable-next-line @typescript-eslint/no-unused-vars
     const { data, info } = datum2D;
-    const { digitalFilterValue = 0 } = info;
-    const fnMode = info.fnMode[1];
+    const { digitalFilter: digitalFilterValue = 0 } = info;
+    const fnMode = info.fnMode[1].toLowerCase();
+    const orderedData = fnMode === 'echo-antiecho'
+        ? echoQuadrature(data)
+        : {
+            re: data.re.z,
+            im: data.im.z,
+        };
     const { zeroFilling = {} } = options;
-    const orderedData = (0, quadrature_1.quadrature)(data, { fnMode });
     const nbColumns = orderedData.re[0].length;
     const { factor = 1 } = zeroFilling;
     const nbPoints = zeroFilling?.nbPoints || 2 ** Math.round(Math.log2(nbColumns * factor));
@@ -46,4 +50,20 @@ function reduce() {
     };
 }
 exports.reduce = reduce;
+function echoQuadrature(data) {
+    const { re: { z: reMatrix }, im: { z: imMatrix }, } = data;
+    const newRe = [];
+    const newIm = [];
+    for (let i = 0; i < reMatrix.length; i += 2) {
+        const reCosine = reMatrix[i];
+        const imCosine = imMatrix[i];
+        const reSine = reMatrix[i + 1];
+        const imSine = imMatrix[i + 1];
+        newRe.push((0, ml_spectra_processing_1.xSubtract)((0, ml_spectra_processing_1.xMultiply)(imSine, -1), imCosine));
+        newRe.push((0, ml_spectra_processing_1.xSubtract)(reSine, reCosine));
+        newIm.push((0, ml_spectra_processing_1.xAdd)(reSine, reCosine));
+        newIm.push((0, ml_spectra_processing_1.xSubtract)(imSine, imCosine));
+    }
+    return { re: newRe, im: newIm };
+}
 //# sourceMappingURL=fftDimension1.js.map

package/lib/datum/data2d/filter2d/fftDimension1.js.map

@@ -1 +1 @@
-{"version":3,"file":"fftDimension1.js","sourceRoot":"","sources":["../../../../src/datum/data2d/filter2d/fftDimension1.ts"],"names":[],"mappings":";;;AAGA,wDAAqD;AACrD,mFAGoD;AACpD,iEAAuD;AAE1C,QAAA,EAAE,GAAG,eAAe,CAAC;AACrB,QAAA,IAAI,GAAG,iBAAiB,CAAC;AAEzB,QAAA,mBAAmB,GAAsC;IACpE,aAAa,EAAE,IAAI;IACnB,aAAa,EAAE,IAAI;CACpB,CAAC;AAEF,SAAgB,KAAK,CAAC,OAAgB,EAAE,OAA+B;IACrE,IAAI,CAAC,YAAY,CAAC,OAAO,CAAC,EAAE;QAC1B,MAAM,IAAI,KAAK,CAAC,6CAA6C,CAAC,CAAC;KAChE;IAED,6DAA6D;IAC7D,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,OAAO,CAAC;IAC/B,MAAM,EAAE,kBAAkB,GAAG,CAAC,EAAE,GAAG,IAAI,CAAC;IAExC,MAAM,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;IAC9B,MAAM,EAAE,WAAW,GAAG,EAAE,EAAE,GAAG,OAAO,CAAC;IACrC,MAAM,WAAW,GAAG,IAAA,uBAAU,EAAC,IAAI,EAAE,EAAE,MAAM,EAAE,CAAC,CAAC;IAEjD,MAAM,SAAS,GAAG,WAAW,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IAE3C,MAAM,EAAE,MAAM,GAAG,CAAC,EAAE,GAAG,WAAW,CAAC;IACnC,MAAM,QAAQ,GACZ,WAAW,EAAE,QAAQ,IAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,CAAC,CAAC;IAE1E,MAAM,WAAW,GAAG,IAAA,uCAAkB,EAAC,WAAW,EAAE;QAClD,MAAM;QACN,GAAG,OAAO;QACV,kBAAkB;QAClB,WAAW,EAAE,EAAE,QAAQ,EAAE;KAC1B,CAAC,CAAC;IAEH,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,GAAG,WAAW,CAAC,EAAE,CAAC,SAAS,EAAE,CAAC,GAAG,CAAC,sCAAc,CAAC,CAAC;IACnE,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,GAAG,WAAW,CAAC,EAAE,CAAC,SAAS,EAAE,CAAC,GAAG,CAAC,sCAAc,CAAC,CAAC;AACrE,CAAC;AA5BD,sBA4BC;AAED,SAAgB,YAAY,CAC1B,OAAgB;IAEhB,IAAI,OAAO,CAAC,IAAI,CAAC,SAAS,IAAI,OAAO,CAAC,IAAI,CAAC,KAAK;QAAE,OAAO,IAAI,CAAC;IAC9D,OAAO,KAAK,CAAC;AACf,CAAC;AALD,oCAKC;AAED,SAAgB,MAAM;IACpB,OAAO;QACL,IAAI,EAAE,IAAI;QACV,MAAM,EAAE,SAAS;KAClB,CAAC;AACJ,CAAC;AALD,wBAKC"}
+{"version":3,"file":"fftDimension1.js","sourceRoot":"","sources":["../../../../src/datum/data2d/filter2d/fftDimension1.ts"],"names":[],"mappings":";;;AAGA,mFAGoD;AACpD,iEAK+B;AAGlB,QAAA,EAAE,GAAG,eAAe,CAAC;AACrB,QAAA,IAAI,GAAG,iBAAiB,CAAC;AAEzB,QAAA,mBAAmB,GAAsC;IACpE,aAAa,EAAE,IAAI;IACnB,aAAa,EAAE,IAAI;CACpB,CAAC;AAEF,SAAgB,KAAK,CAAC,OAAgB,EAAE,OAA+B;IACrE,IAAI,CAAC,YAAY,CAAC,OAAO,CAAC,EAAE;QAC1B,MAAM,IAAI,KAAK,CAAC,6CAA6C,CAAC,CAAC;KAChE;IAED,6DAA6D;IAC7D,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,OAAO,CAAC;IAC/B,MAAM,EAAE,aAAa,EAAE,kBAAkB,GAAG,CAAC,EAAE,GAAG,IAAI,CAAC;IAEvD,MAAM,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC;IAC5C,MAAM,WAAW,GACf,MAAM,KAAK,eAAe;QACxB,CAAC,CAAC,cAAc,CAAC,IAAI,CAAC;QACtB,CAAC,CAAC;YACE,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;YACb,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;SACd,CAAC;IAER,MAAM,EAAE,WAAW,GAAG,EAAE,EAAE,GAAG,OAAO,CAAC;IAErC,MAAM,SAAS,GAAG,WAAW,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IAE3C,MAAM,EAAE,MAAM,GAAG,CAAC,EAAE,GAAG,WAAW,CAAC;IACnC,MAAM,QAAQ,GACZ,WAAW,EAAE,QAAQ,IAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,CAAC,CAAC;IAC1E,MAAM,WAAW,GAAG,IAAA,uCAAkB,EAAC,WAAW,EAAE;QAClD,MAAM;QACN,GAAG,OAAO;QACV,kBAAkB;QAClB,WAAW,EAAE,EAAE,QAAQ,EAAE;KAC1B,CAAC,CAAC;IACH,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,GAAG,WAAW,CAAC,EAAE,CAAC,SAAS,EAAE,CAAC,GAAG,CAAC,sCAAc,CAAC,CAAC;IACnE,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,GAAG,WAAW,CAAC,EAAE,CAAC,SAAS,EAAE,CAAC,GAAG,CAAC,sCAAc,CAAC,CAAC;AACrE,CAAC;AAjCD,sBAiCC;AAED,SAAgB,YAAY,CAC1B,OAAgB;IAEhB,IAAI,OAAO,CAAC,IAAI,CAAC,SAAS,IAAI,OAAO,CAAC,IAAI,CAAC,KAAK;QAAE,OAAO,IAAI,CAAC;IAC9D,OAAO,KAAK,CAAC;AACf,CAAC;AALD,oCAKC;AAED,SAAgB,MAAM;IACpB,OAAO;QACL,IAAI,EAAE,IAAI;QACV,MAAM,EAAE,SAAS;KAClB,CAAC;AACJ,CAAC;AALD,wBAKC;AAED,SAAS,cAAc,CAAC,IAAuB;IAC7C,MAAM,EACJ,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,EACnB,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,GACpB,GAAG,IAAI,CAAC;IACT,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,EAAE;QAC3C,MAAM,QAAQ,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAC7B,MAAM,QAAQ,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAC7B,MAAM,MAAM,GAAG,QAAQ,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;QAC/B,MAAM,MAAM,GAAG,QAAQ,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;QAE/B,KAAK,CAAC,IAAI,CAAC,IAAA,iCAAS,EAAC,IAAA,iCAAS,EAAC,MAAM,EAAE,CAAC,CAAC,CAAC,EAAE,QAAQ,CAAC,CAAC,CAAC;QACvD,KAAK,CAAC,IAAI,CAAC,IAAA,iCAAS,EAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;QACxC,KAAK,CAAC,IAAI,CAAC,IAAA,4BAAI,EAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;QACnC,KAAK,CAAC,IAAI,CAAC,IAAA,iCAAS,EAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;KACzC;IAED,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC"}

package/lib/datum/data2d/filter2d/fftDimension2.js

@@ -16,26 +16,24 @@ function apply(datum2D, options) {
     }
     const { data, info } = datum2D;
     const fnMode = info.fnMode[1];
+    const orderedData = {
+        re: data.re.z,
+        im: data.im.z,
+    };
     const { zeroFilling = {} } = options;
-    const nbRows = data.re.z.length;
-    const { factor = 1 } = zeroFilling;
+    const nbRows = orderedData.re.length;
+    const { factor = 2 } = zeroFilling;
     const nbPoints = zeroFilling?.nbPoints || 2 ** Math.round(Math.log2(nbRows * factor));
     const transformed = (0, fftIndirectDimension_1.fftIndirectDimension)({
-        re: data.re.z,
-        im: data.im.z,
+        re: orderedData.re,
+        im: orderedData.im,
     }, {
         fnMode,
         ...options,
         zeroFilling: { nbPoints },
     });
-    const minMaxXY = (0, getMinMaxXY_1.getMinMaxXY)(info);
     datum2D.data = {
-        rr: {
-            z: transformed.re.to2DArray().map(ml_spectra_processing_1.xEnsureFloat64),
-            maxZ: transformed.re.max(),
-            minZ: transformed.re.min(),
-            ...minMaxXY,
-        },
+        ...getQuadrants(transformed, info),
     };
     const { isFid, isComplex, ...resInfo } = info;
     datum2D.info = {
@@ -44,6 +42,26 @@ function apply(datum2D, options) {
     };
 }
 exports.apply = apply;
+function getQuadrants(transformed, info) {
+    const quadrants = {};
+    const { fnMode } = info;
+    const minMaxXY = (0, getMinMaxXY_1.getMinMaxXY)(info);
+    const buildQuandrants = (keys) => {
+        for (const key of keys) {
+            quadrants[key] = {
+                z: transformed[key].to2DArray().map(ml_spectra_processing_1.xEnsureFloat64),
+                maxZ: transformed[key].max(),
+                minZ: transformed[key].min(),
+                ...minMaxXY,
+            };
+        }
+        return quadrants;
+    };
+    if (fnMode[1] === 'QF') {
+        return buildQuandrants(['rr', 'ir']);
+    }
+    return buildQuandrants(['rr', 'ir', 'ri', 'ii']);
+}
 function isApplicable(datum2D) {
     if (datum2D.info.isComplex && datum2D.info.isFid)
         return true;

package/lib/datum/data2d/filter2d/fftDimension2.js.map

@@ -1 +1 @@
-{"version":3,"file":"fftDimension2.js","sourceRoot":"","sources":["../../../../src/datum/data2d/filter2d/fftDimension2.ts"],"names":[],"mappings":";;;AAGA,uFAGsD;AACtD,iEAAuD;AACvD,+DAA4D;AAE/C,QAAA,EAAE,GAAG,eAAe,CAAC;AACrB,QAAA,IAAI,GAAG,iBAAiB,CAAC;AAEzB,QAAA,mBAAmB,GAAsC;IACpE,aAAa,EAAE,IAAI;IACnB,aAAa,EAAE,IAAI;CACpB,CAAC;AAEF,SAAgB,KAAK,CAAC,OAAgB,EAAE,OAAiC;IACvE,IAAI,CAAC,YAAY,CAAC,OAAO,CAAC,EAAE;QAC1B,MAAM,IAAI,KAAK,CAAC,6CAA6C,CAAC,CAAC;KAChE;IACD,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,OAAO,CAAC;IAC/B,MAAM,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;IAC9B,MAAM,EAAE,WAAW,GAAG,EAAE,EAAE,GAAG,OAAO,CAAC;IACrC,MAAM,MAAM,GAAG,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC,MAAM,CAAC;IAChC,MAAM,EAAE,MAAM,GAAG,CAAC,EAAE,GAAG,WAAW,CAAC;IACnC,MAAM,QAAQ,GACZ,WAAW,EAAE,QAAQ,IAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,CAAC,CAAC;IAEvE,MAAM,WAAW,GAAG,IAAA,2CAAoB,EACtC;QACE,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;QACb,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;KACd,EACD;QACE,MAAM;QACN,GAAG,OAAO;QACV,WAAW,EAAE,EAAE,QAAQ,EAAE;KAC1B,CACF,CAAC;IAEF,MAAM,QAAQ,GAAG,IAAA,yBAAW,EAAC,IAAI,CAAC,CAAC;IAElC,OAAO,CAAC,IAAoB,GAAG;QAC9B,EAAE,EAAE;YACF,CAAC,EAAE,WAAW,CAAC,EAAE,CAAC,SAAS,EAAE,CAAC,GAAG,CAAC,sCAAc,CAAC;YACjD,IAAI,EAAE,WAAW,CAAC,EAAE,CAAC,GAAG,EAAE;YAC1B,IAAI,EAAE,WAAW,CAAC,EAAE,CAAC,GAAG,EAAE;YAC1B,GAAG,QAAQ;SACZ;KACF,CAAC;IACF,MAAM,EAAE,KAAK,EAAE,SAAS,EAAE,GAAG,OAAO,EAAE,GAAG,IAAI,CAAC;IAC9C,OAAO,CAAC,IAAI,GAAG;QACb,GAAG,OAAO;QACV,IAAI,EAAE,IAAI;KACX,CAAC;AACJ,CAAC;AAvCD,sBAuCC;AAED,SAAgB,YAAY,CAC1B,OAAgB;IAEhB,IAAI,OAAO,CAAC,IAAI,CAAC,SAAS,IAAI,OAAO,CAAC,IAAI,CAAC,KAAK;QAAE,OAAO,IAAI,CAAC;IAC9D,OAAO,KAAK,CAAC;AACf,CAAC;AALD,oCAKC;AAED,SAAgB,MAAM;IACpB,OAAO;QACL,IAAI,EAAE,IAAI;QACV,MAAM,EAAE,SAAS;KAClB,CAAC;AACJ,CAAC;AALD,wBAKC"}
+{"version":3,"file":"fftDimension2.js","sourceRoot":"","sources":["../../../../src/datum/data2d/filter2d/fftDimension2.ts"],"names":[],"mappings":";;;AAGA,uFAGsD;AACtD,iEAAuD;AACvD,+DAA4D;AAG/C,QAAA,EAAE,GAAG,eAAe,CAAC;AACrB,QAAA,IAAI,GAAG,iBAAiB,CAAC;AAEzB,QAAA,mBAAmB,GAAsC;IACpE,aAAa,EAAE,IAAI;IACnB,aAAa,EAAE,IAAI;CACpB,CAAC;AAEF,SAAgB,KAAK,CAAC,OAAgB,EAAE,OAAiC;IACvE,IAAI,CAAC,YAAY,CAAC,OAAO,CAAC,EAAE;QAC1B,MAAM,IAAI,KAAK,CAAC,6CAA6C,CAAC,CAAC;KAChE;IACD,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,OAAO,CAAC;IAC/B,MAAM,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;IAE9B,MAAM,WAAW,GAAG;QAClB,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;QACb,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;KACd,CAAC;IAEF,MAAM,EAAE,WAAW,GAAG,EAAE,EAAE,GAAG,OAAO,CAAC;IACrC,MAAM,MAAM,GAAG,WAAW,CAAC,EAAE,CAAC,MAAM,CAAC;IACrC,MAAM,EAAE,MAAM,GAAG,CAAC,EAAE,GAAG,WAAW,CAAC;IACnC,MAAM,QAAQ,GACZ,WAAW,EAAE,QAAQ,IAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC,CAAC,CAAC;IACvE,MAAM,WAAW,GAAG,IAAA,2CAAoB,EACtC;QACE,EAAE,EAAE,WAAW,CAAC,EAAE;QAClB,EAAE,EAAE,WAAW,CAAC,EAAE;KACnB,EACD;QACE,MAAM;QACN,GAAG,OAAO;QACV,WAAW,EAAE,EAAE,QAAQ,EAAE;KAC1B,CACF,CAAC;IACD,OAAO,CAAC,IAAoB,GAAG;QAC9B,GAAG,YAAY,CAAC,WAAW,EAAE,IAAI,CAAC;KACnC,CAAC;IACF,MAAM,EAAE,KAAK,EAAE,SAAS,EAAE,GAAG,OAAO,EAAE,GAAG,IAAI,CAAC;IAC9C,OAAO,CAAC,IAAI,GAAG;QACb,GAAG,OAAO;QACV,IAAI,EAAE,IAAI;KACX,CAAC;AACJ,CAAC;AApCD,sBAoCC;AACD,SAAS,YAAY,CACnB,WAAmC,EACnC,IAAyB;IAEzB,MAAM,SAAS,GAAyB,EAAE,CAAC;IAC3C,MAAM,EAAE,MAAM,EAAE,GAAG,IAAI,CAAC;IACxB,MAAM,QAAQ,GAAG,IAAA,yBAAW,EAAC,IAAI,CAAC,CAAC;IACnC,MAAM,eAAe,GAAG,CAAC,IAAsC,EAAE,EAAE;QACjE,KAAK,MAAM,GAAG,IAAI,IAAI,EAAE;YACtB,SAAS,CAAC,GAAG,CAAC,GAAG;gBACf,CAAC,EAAE,WAAW,CAAC,GAAG,CAAC,CAAC,SAAS,EAAE,CAAC,GAAG,CAAC,sCAAc,CAAC;gBACnD,IAAI,EAAE,WAAW,CAAC,GAAG,CAAC,CAAC,GAAG,EAAE;gBAC5B,IAAI,EAAE,WAAW,CAAC,GAAG,CAAC,CAAC,GAAG,EAAE;gBAC5B,GAAG,QAAQ;aACZ,CAAC;SACH;QACD,OAAO,SAAwB,CAAC;IAClC,CAAC,CAAC;IAEF,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,IAAI,EAAE;QACtB,OAAO,eAAe,CAAC,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC;KACtC;IAED,OAAO,eAAe,CAAC,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC;AACnD,CAAC;AACD,SAAgB,YAAY,CAC1B,OAAgB;IAEhB,IAAI,OAAO,CAAC,IAAI,CAAC,SAAS,IAAI,OAAO,CAAC,IAAI,CAAC,KAAK;QAAE,OAAO,IAAI,CAAC;IAC9D,OAAO,KAAK,CAAC;AACf,CAAC;AALD,oCAKC;AAED,SAAgB,MAAM;IACpB,OAAO;QACL,IAAI,EAAE,IAAI;QACV,MAAM,EAAE,SAAS;KAClB,CAAC;AACJ,CAAC;AALD,wBAKC"}

package/lib/xyz/quadrature.js

@@ -11,8 +11,6 @@ function quadrature(data, options) {
             return ttpiQuadrature(data);
         case 'states':
             return shrQuadrature(data);
-        case 'echo-antiecho':
-            return echoQuadrature(data);
         default:
             return {
                 re: data.re.z,
@@ -21,22 +19,6 @@ function quadrature(data, options) {
     }
 }
 exports.quadrature = quadrature;
-function echoQuadrature(data) {
-    const { re: { z: reMatrix }, im: { z: imMatrix }, } = data;
-    const newRe = [];
-    const newIm = [];
-    for (let i = 0; i < reMatrix.length; i += 2) {
-        const reCosine = reMatrix[i];
-        const imCosine = imMatrix[i];
-        const reSine = reMatrix[i + 1];
-        const imSine = imMatrix[i + 1];
-        newRe.push((0, ml_spectra_processing_1.xSubtract)((0, ml_spectra_processing_1.xMultiply)(imSine, -1), imCosine));
-        newRe.push((0, ml_spectra_processing_1.xSubtract)(reSine, reCosine));
-        newIm.push((0, ml_spectra_processing_1.xAdd)(reSine, reCosine));
-        newIm.push((0, ml_spectra_processing_1.xSubtract)(imSine, imCosine));
-    }
-    return { re: newRe, im: newIm };
-}
 function shrQuadrature(data) {
     const { re, im } = data;
     return { re: re.z, im: im.z };

package/lib/xyz/quadrature.js.map

@@ -1 +1 @@
-{"version":3,"file":"quadrature.js","sourceRoot":"","sources":["../../src/xyz/quadrature.ts"],"names":[],"mappings":";;;AACA,iEAAmE;AAEnE,gEAAgF;AAEhF,SAAgB,UAAU,CAAC,IAAe,EAAE,OAA2B;IACrE,IAAA,+BAAc,EAAC,IAAI,CAAC,CAAC;IAErB,MAAM,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC;IAE3B,QAAQ,MAAM,CAAC,WAAW,EAAE,EAAE;QAC5B,KAAK,MAAM;YACT,OAAO,cAAc,CAAC,IAAI,CAAC,CAAC;QAC9B,KAAK,QAAQ;YACX,OAAO,aAAa,CAAC,IAAI,CAAC,CAAC;QAC7B,KAAK,eAAe;YAClB,OAAO,cAAc,CAAC,IAAI,CAAC,CAAC;QAC9B;YACE,OAAO;gBACL,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;gBACb,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;aACd,CAAC;KACL;AACH,CAAC;AAlBD,gCAkBC;AAED,SAAS,cAAc,CAAC,IAAuB;IAC7C,MAAM,EACJ,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,EACnB,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,GACpB,GAAG,IAAI,CAAC;IAET,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,EAAE;QAC3C,MAAM,QAAQ,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAC7B,MAAM,QAAQ,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAC7B,MAAM,MAAM,GAAG,QAAQ,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;QAC/B,MAAM,MAAM,GAAG,QAAQ,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;QAE/B,KAAK,CAAC,IAAI,CAAC,IAAA,iCAAS,EAAC,IAAA,iCAAS,EAAC,MAAM,EAAE,CAAC,CAAC,CAAC,EAAE,QAAQ,CAAC,CAAC,CAAC;QACvD,KAAK,CAAC,IAAI,CAAC,IAAA,iCAAS,EAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;QACxC,KAAK,CAAC,IAAI,CAAC,IAAA,4BAAI,EAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;QACnC,KAAK,CAAC,IAAI,CAAC,IAAA,iCAAS,EAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;KACzC;IAED,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC;AAED,SAAS,aAAa,CAAC,IAAuB;IAC5C,MAAM,EAAE,EAAE,EAAE,EAAE,EAAE,GAAG,IAAI,CAAC;IACxB,OAAO,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,CAAC;AAChC,CAAC;AAED,SAAS,cAAc,CAAC,IAAuB;IAC7C,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,MAAM,KAAK,GAAkB,EAAE,CAAC;IAEhC,MAAM,EACJ,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,EACnB,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,GACpB,GAAG,IAAI,CAAC;IACT,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;QACxC,KAAK,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,CAAC,IAAA,iCAAS,EAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;QACrE,KAAK,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,CAAC,IAAA,iCAAS,EAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;KACtE;IAED,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC"}
+{"version":3,"file":"quadrature.js","sourceRoot":"","sources":["../../src/xyz/quadrature.ts"],"names":[],"mappings":";;;AACA,iEAAkD;AAElD,gEAAgF;AAEhF,SAAgB,UAAU,CAAC,IAAe,EAAE,OAA2B;IACrE,IAAA,+BAAc,EAAC,IAAI,CAAC,CAAC;IAErB,MAAM,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC;IAE3B,QAAQ,MAAM,CAAC,WAAW,EAAE,EAAE;QAC5B,KAAK,MAAM;YACT,OAAO,cAAc,CAAC,IAAI,CAAC,CAAC;QAC9B,KAAK,QAAQ;YACX,OAAO,aAAa,CAAC,IAAI,CAAC,CAAC;QAC7B;YACE,OAAO;gBACL,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;gBACb,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;aACd,CAAC;KACL;AACH,CAAC;AAhBD,gCAgBC;AAED,SAAS,aAAa,CAAC,IAAuB;IAC5C,MAAM,EAAE,EAAE,EAAE,EAAE,EAAE,GAAG,IAAI,CAAC;IACxB,OAAO,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,CAAC;AAChC,CAAC;AAED,SAAS,cAAc,CAAC,IAAuB;IAC7C,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,MAAM,KAAK,GAAkB,EAAE,CAAC;IAEhC,MAAM,EACJ,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,EACnB,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,GACpB,GAAG,IAAI,CAAC;IACT,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;QACxC,KAAK,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,CAAC,IAAA,iCAAS,EAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;QACrE,KAAK,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,CAAC,IAAA,iCAAS,EAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;KACtE;IAED,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC"}

package/lib/xyz/util/fft2d/fftDirectDimension.js

@@ -20,8 +20,7 @@ function fftDirectDimension(data, options = {}) {
     const reFFT = new ml_matrix_1.default(nbRows, nbPointsF2);
     const imFFT = new ml_matrix_1.default(nbRows, nbPointsF2);
     const { apodization: apodizationF2, phaseCorrection = {} } = options;
-    let { ph0: ph0F2, ph1: ph1F2 } = phaseCorrection;
-    const { mode: pcModeF2 = 'no' } = phaseCorrection;
+    const { ph0: ph0F2, ph1: ph1F2, mode: pcModeF2 = 'no' } = phaseCorrection;
     for (let i = 0; i < nbRows; i++) {
         const newData = (0, digitalFilter_1.digitalFilter)({ re: reData[i], im: imData[i] }, { digitalFilterValue });
         Object.assign(newData, (0, removeDCOffset_1.removeDCOffset)(newData, { digitalFilterValue }));
@@ -35,14 +34,6 @@ function fftDirectDimension(data, options = {}) {
         if (dfResidual > 0) {
             Object.assign(newData, (0, ml_spectra_processing_1.reimPhaseCorrection)(newData, 0, -dfResidual));
         }
-        if (i === 0 &&
-            pcModeF2 === 'pk' &&
-            ph0F2 === undefined &&
-            ph1F2 === undefined) {
-            const phased = (0, ml_spectra_processing_1.reimAutoPhaseCorrection)(newData, { magnitudeMode: false });
-            ph0F2 = phased.ph0;
-            ph1F2 = phased.ph1;
-        }
         if (pcModeF2 === 'pk' && ph0F2 !== undefined && ph1F2 !== undefined) {
             Object.assign(newData, (0, ml_spectra_processing_1.reimPhaseCorrection)(newData, (ph0F2 * Math.PI) / 180, (ph1F2 * Math.PI) / 180));
         }

package/lib/xyz/util/fft2d/fftDirectDimension.js.map

@@ -1 +1 @@
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+{"version":3,"file":"fftDirectDimension.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/fftDirectDimension.ts"],"names":[],"mappings":";;;;;;AACA,0DAA+B;AAC/B,iEAAqE;AAErE,kEAG0C;AAE1C,mDAAgD;AAChD,qDAAkD;AAClD,+CAAgE;AAgBhE,SAAgB,kBAAkB,CAChC,IAA8C,EAC9C,UAAkC,EAAE;IAEpC,MAAM,EAAE,EAAE,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,EAAE,GAAG,IAAI,CAAC;IACxC,MAAM,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC;IAC7B,MAAM,SAAS,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IAEnC,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,kBAAkB,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;IAEvE,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,CAAC,EAAE,GAAG,aAAa,IAAI,EAAE,CAAC;IACrD,MAAM,UAAU,GACd,aAAa,EAAE,QAAQ,IAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,GAAG,QAAQ,CAAC,CAAC,CAAC;IAE9E,MAAM,KAAK,GAAG,IAAI,mBAAM,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;IAC7C,MAAM,KAAK,GAAG,IAAI,mBAAM,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;IAE7C,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,eAAe,GAAG,EAAE,EAAE,GAAG,OAAO,CAAC;IACrE,MAAM,EAAE,GAAG,EAAE,KAAK,EAAE,GAAG,EAAE,KAAK,EAAE,IAAI,EAAE,QAAQ,GAAG,IAAI,EAAE,GAAG,eAAe,CAAC;IAE1E,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,EAAE,CAAC,EAAE,EAAE;QAC/B,MAAM,OAAO,GAAG,IAAA,6BAAa,EAC3B,EAAE,EAAE,EAAE,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,EAAE,MAAM,CAAC,CAAC,CAAC,EAAE,EAChC,EAAE,kBAAkB,EAAE,CACvB,CAAC;QAEF,MAAM,CAAC,MAAM,CAAC,OAAO,EAAE,IAAA,+BAAc,EAAC,OAAO,EAAE,EAAE,kBAAkB,EAAE,CAAC,CAAC,CAAC;QAExE,IAAI,aAAa,EAAE;YACjB,MAAM,EAAE,EAAE,EAAE,GAAG,EAAE,EAAE,EAAE,GAAG,EAAE,GAAG,IAAA,yBAAW,EAAC,OAAO,EAAE,aAAa,CAAC,CAAC;YACjE,MAAM,CAAC,MAAM,CAAC,OAAO,EAAE,EAAE,EAAE,EAAE,GAAG,EAAE,EAAE,EAAE,GAAG,EAAE,CAAC,CAAC;SAC9C;QAED,MAAM,CAAC,MAAM,CACX,OAAO,EACP,IAAA,yBAAW,EAAC,OAAO,EAAE,EAAE,kBAAkB,EAAE,QAAQ,EAAE,UAAU,EAAE,CAAC,CACnE,CAAC;QAEF,MAAM,CAAC,MAAM,CAAC,OAAO,EAAE,IAAA,+BAAO,EAAC,OAAO,EAAE,EAAE,cAAc,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC;QAEnE,MAAM,UAAU,GACd,CAAC,kBAAkB,GAAG,IAAI,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC,GAAG,IAAI,CAAC,EAAE,GAAG,CAAC,CAAC;QACtE,IAAI,UAAU,GAAG,CAAC,EAAE;YAClB,MAAM,CAAC,MAAM,CAAC,OAAO,EAAE,IAAA,2CAAmB,EAAC,OAAO,EAAE,CAAC,EAAE,CAAC,UAAU,CAAC,CAAC,CAAC;SACtE;QACD,IAAI,QAAQ,KAAK,IAAI,IAAI,KAAK,KAAK,SAAS,IAAI,KAAK,KAAK,SAAS,EAAE;YACnE,MAAM,CAAC,MAAM,CACX,OAAO,EACP,IAAA,2CAAmB,EACjB,OAAO,EACP,CAAC,KAAK,GAAG,IAAI,CAAC,EAAE,CAAC,GAAG,GAAG,EACvB,CAAC,KAAK,GAAG,IAAI,CAAC,EAAE,CAAC,GAAG,GAAG,CACxB,CACF,CAAC;SACH;QAED,KAAK,CAAC,MAAM,CAAC,CAAC,EAAE,OAAO,CAAC,EAAE,CAAC,CAAC;QAC5B,KAAK,CAAC,MAAM,CAAC,CAAC,EAAE,OAAO,CAAC,EAAE,CAAC,CAAC;KAC7B;IAED,OAAO;QACL,EAAE,EAAE,KAAK;QACT,EAAE,EAAE,KAAK;KACV,CAAC;AACJ,CAAC;AAhED,gDAgEC"}

package/lib/xyz/util/fft2d/fftIndirectDimension.d.ts

@@ -9,6 +9,7 @@ interface PhaseCorrection {
 }
 export interface IndirectDimensionOptions {
     fnMode?: string;
+    reverse?: boolean;
     zeroFilling?: ZeroFillingOptions;
     apodization?: ApodizationFilterOptions;
     phaseCorrection?: PhaseCorrection;
@@ -16,8 +17,5 @@ export interface IndirectDimensionOptions {
 export declare function fftIndirectDimension(data: {
     re: DoubleArray[] | Matrix;
     im: DoubleArray[] | Matrix;
-}, options: IndirectDimensionOptions): {
-    re: Matrix;
-    im: Matrix;
-};
+}, options: IndirectDimensionOptions): Record<string, Matrix>;
 export {};

package/lib/xyz/util/fft2d/fftIndirectDimension.js

@@ -9,64 +9,117 @@ const ml_spectra_processing_1 = require("ml-spectra-processing");
 const apodization_1 = require("../../../apodization/apodization");
 const zeroFilling_1 = require("./zeroFilling");
 function fftIndirectDimension(data, options) {
-    const reData = ml_matrix_1.default.checkMatrix(data.re);
-    const imData = ml_matrix_1.default.checkMatrix(data.im);
-    const nbRows = reData.rows;
-    const nbColumns = reData.columns;
-    const { zeroFilling: zeroFillingF1 } = options;
+    const newData = {
+        re: ml_matrix_1.default.checkMatrix(data.re),
+        im: ml_matrix_1.default.checkMatrix(data.im),
+    };
+    const nbRows = newData.re.rows;
+    const nbColumns = newData.re.columns;
+    const { zeroFilling: zeroFillingF1, reverse } = options;
     const { factor: f1Factor = 2 } = zeroFillingF1 || {};
-    const nbPointsF1 = zeroFillingF1?.nbPoints || 2 ** Math.round(Math.log2(nbRows * f1Factor));
-    const { apodization: apodizationF1, phaseCorrection = {} } = options;
-    let { ph0: ph0F1, ph1: ph1F1 } = phaseCorrection;
-    const pcModeF1 = phaseCorrection.mode;
-    const reResult = new ml_matrix_1.default(nbPointsF1, nbColumns);
-    const imResult = new ml_matrix_1.default(nbPointsF1, nbColumns);
-    for (let i = 0; i < nbColumns; i++) {
-        const { re: aRe, im: aIm } = (0, apodization_1.apodization)({
-            re: reData.getColumn(i),
-            im: imData.getColumn(i),
-        }, apodizationF1);
-        const newRe = [];
-        const newIm = [];
-        if (options.fnMode?.toLowerCase() === 'echo-antiecho') {
-            for (let j = 0; j < aRe.length; j += 2) {
-                newRe.push(aRe[j]);
-                newIm.push(aRe[j + 1]);
-            }
+    const nbPoints = zeroFillingF1?.nbPoints || 2 ** Math.round(Math.log2(nbRows * f1Factor));
+    const { fnMode } = options;
+    const newOptions = {
+        ...options,
+        zeroFilling: { ...zeroFillingF1, nbPoints },
+    };
+    const quadrants = {};
+    if (fnMode === 'QF') {
+        const reResult = new ml_matrix_1.default(nbPoints, nbColumns);
+        const imResult = new ml_matrix_1.default(nbPoints, nbColumns);
+        for (let i = 0; i < nbColumns; i++) {
+            const data = {
+                re: newData.re.getColumn(i),
+                im: reverse
+                    ? newData.im.getColumn(i)
+                    : (0, ml_spectra_processing_1.xMultiply)(newData.im.getColumn(i), -1),
+            };
+            const { re, im } = applyFFT(data, newOptions);
+            reResult.setColumn(i, re);
+            imResult.setColumn(i, im);
         }
-        else {
-            for (let j = 0; j < aRe.length; j++) {
-                newRe.push(aRe[j]);
-                newIm.push(-aIm[j]);
+        quadrants.rr = reResult;
+        quadrants.ir = imResult;
+    }
+    else {
+        // four quadrant processing
+        for (const current in newData) {
+            const reResult = new ml_matrix_1.default(nbPoints, nbColumns);
+            const imResult = new ml_matrix_1.default(nbPoints, nbColumns);
+            for (let i = 0; i < nbColumns; i++) {
+                const data = getColumnFrom(newData[current], { fnMode, index: i });
+                const { re, im } = applyFFT(data, newOptions);
+                reResult.setColumn(i, re);
+                imResult.setColumn(i, im);
             }
-        }
-        const transformed = (0, ml_spectra_processing_1.reimFFT)((0, zeroFilling_1.zeroFilling)({
-            re: newRe,
-            im: newIm,
-        }, { digitalFilterValue: 0, nbPoints: nbPointsF1 }), { applyZeroShift: true });
-        let { re, im } = transformed;
-        if (options.phaseCorrection?.mode === 'mc') {
-            re = (0, ml_spectra_processing_1.reimAbsolute)({ re, im });
-            im = new Float64Array(im.length);
-        }
-        if (pcModeF1 === 'pk') {
-            if (i === 0 && ph0F1 === undefined && ph1F1 === undefined) {
-                //here we can improve it by checking if the experiment is phase sensitive.
-                const phased = (0, ml_spectra_processing_1.reimAutoPhaseCorrection)({ re, im }, { magnitudeMode: false });
-                ph0F1 = phased.ph0;
-                ph1F1 = phased.ph1;
+            if (current === 're') {
+                quadrants.rr = reResult;
+                quadrants.ir = imResult;
             }
-            if (ph0F1 !== undefined && ph1F1 !== undefined) {
-                Object.assign(transformed, (0, ml_spectra_processing_1.reimPhaseCorrection)(transformed, (ph0F1 * Math.PI) / 180, (ph1F1 * Math.PI) / 180));
+            else {
+                quadrants.ri = reResult;
+                quadrants.ii = imResult;
             }
         }
-        reResult.setColumn(i, re);
-        imResult.setColumn(i, im);
     }
-    return {
-        re: reResult,
-        im: imResult,
-    };
+    return quadrants;
 }
 exports.fftIndirectDimension = fftIndirectDimension;
+function applyFFT(data, options) {
+    const { fnMode, apodization: apodizationF1, zeroFilling: zeroFillingF1 = {}, phaseCorrection = {}, } = options;
+    const { re, im } = (0, apodization_1.apodization)(data, apodizationF1);
+    const { nbPoints = 0 } = zeroFillingF1;
+    const transformed = (0, ml_spectra_processing_1.reimFFT)((0, zeroFilling_1.zeroFilling)({ re, im }, { nbPoints }), {
+        applyZeroShift: !['SEQ', 'TPPI'].some((k) => fnMode === k),
+    });
+    if (options.phaseCorrection?.mode === 'mc') {
+        Object.assign(transformed, {
+            re: (0, ml_spectra_processing_1.reimAbsolute)(transformed),
+            im: new Float64Array(nbPoints),
+        });
+    }
+    const { mode: pcModeF1, ph0: ph0F1, ph1: ph1F1 } = phaseCorrection;
+    if (pcModeF1 === 'pk' && ph0F1 !== undefined && ph1F1 !== undefined) {
+        Object.assign(transformed, (0, ml_spectra_processing_1.reimPhaseCorrection)(transformed, (ph0F1 * Math.PI) / 180, (ph1F1 * Math.PI) / 180));
+    }
+    return transformed;
+}
+function getColumnFrom(data, info) {
+    const { fnMode, index } = info;
+    const reverse = info.reverse || fnMode === 'QF';
+    const nbPoints = data.rows / 2;
+    const re = new Float64Array(nbPoints);
+    const im = new Float64Array(nbPoints);
+    switch (fnMode?.toLocaleLowerCase()) {
+        // case 'states':
+        // case 'echo-antiecho':
+        case 'seq':
+        case 'tppi':
+            return {
+                re: data.getColumn(index),
+                im: new Float64Array(data.rows),
+            };
+        default:
+            if (reverse) {
+                for (let i = 0; i < nbPoints; i++) {
+                    re[i] = data.get(2 * i, index);
+                    im[i] = -data.get(2 * i + 1, index);
+                }
+            }
+            else {
+                for (let i = 0; i < nbPoints; i++) {
+                    re[i] = data.get(2 * i, index);
+                    im[i] = data.get(2 * i + 1, index);
+                }
+            }
+    }
+    if (fnMode === 'states-ttpi') {
+        //it is to convert to the equivalent of states
+        for (let i = 0; i < nbPoints; i += 2) {
+            re[i] *= -1;
+            im[i] *= -1;
+        }
+    }
+    return { re, im };
+}
 //# sourceMappingURL=fftIndirectDimension.js.map

package/lib/xyz/util/fft2d/fftIndirectDimension.js.map

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package/lib/xyz/util/getMinMaxXY.d.ts

@@ -1,4 +1,4 @@
-export declare function getMinMaxXY(info: any): {
+export declare function getMinMaxXY(info: Record<string, any>): {
     minX: number;
     maxX: number;
     minY: number;

package/lib/xyz/util/getMinMaxXY.js

@@ -5,9 +5,9 @@ function getMinMaxXY(info) {
     const min = [];
     const max = [];
     for (let i = 0; i < info.baseFrequency.length; i++) {
-        const baseFrequency = Number.parseFloat(info.baseFrequency[i]);
-        const frequencyOffset = Number.parseFloat(info.frequencyOffset[i]);
-        const spectralWidth = Number.parseFloat(info.spectralWidth[i]);
+        const baseFrequency = info.baseFrequency[i];
+        const frequencyOffset = info.frequencyOffset[i];
+        const spectralWidth = info.spectralWidth[i];
         const offset = frequencyOffset / baseFrequency;
         min.push(offset - spectralWidth * 0.5);
         max.push(offset + spectralWidth * 0.5);

package/lib/xyz/util/getMinMaxXY.js.map

@@ -1 +1 @@
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package/lib/xyz/util/phaseCorrection/applyOverImag.d.ts

@@ -0,0 +1,24 @@
+import { NmrData2DFt } from 'cheminfo-types';
+import { PhaseCorrectionOptions } from '../../xyzPhaseCorrectionDirectDimension';
+export declare function applyOverImag<T extends NmrData2DFt>(data: T, options: PhaseCorrectionOptions): T & {
+    ri: {
+        z: Float64Array[];
+        maxZ: number;
+        minZ: number;
+        minY: number;
+        maxY: number;
+        minX: number;
+        maxX: number;
+    };
+    ii: {
+        z: Float64Array[];
+        maxZ: number;
+        minZ: number;
+        minY: number;
+        maxY: number;
+        minX: number;
+        maxX: number;
+    };
+    rr: import("cheminfo-types").NmrData2DContent;
+    ir: import("cheminfo-types").NmrData2DContent;
+};

package/lib/xyz/util/phaseCorrection/applyOverImag.js

@@ -0,0 +1,27 @@
+"use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.applyOverImag = void 0;
+const getZMinMax_1 = require("./getZMinMax");
+const ml_matrix_1 = __importDefault(require("ml-matrix"));
+const checkNmrData2DFourQuad_1 = require("./checkNmrData2DFourQuad");
+function applyOverImag(data, options) {
+    (0, checkNmrData2DFourQuad_1.checkNmrData2DFourQuad)(data);
+    const { applyPhaseCorrection } = options;
+    const { re, im } = applyPhaseCorrection({ re: ml_matrix_1.default.checkMatrix(data.ri.z), im: ml_matrix_1.default.checkMatrix(data.ii.z) }, options);
+    return {
+        ...data,
+        ri: {
+            ...data.ri,
+            ...(0, getZMinMax_1.getZMinMax)(re),
+        },
+        ii: {
+            ...data.ii,
+            ...(0, getZMinMax_1.getZMinMax)(im),
+        },
+    };
+}
+exports.applyOverImag = applyOverImag;
+//# sourceMappingURL=applyOverImag.js.map

package/lib/xyz/util/phaseCorrection/applyOverImag.js.map

@@ -0,0 +1 @@
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package/lib/xyz/util/phaseCorrection/applyOverReal.d.ts

@@ -0,0 +1,22 @@
+import { NmrData2DFt } from 'cheminfo-types';
+import { PhaseCorrectionOptions } from '../../xyzPhaseCorrectionDirectDimension';
+export declare function applyOverReal<T extends NmrData2DFt>(data: T, options: PhaseCorrectionOptions): T & {
+    rr: {
+        z: Float64Array[];
+        maxZ: number;
+        minZ: number;
+        minY: number;
+        maxY: number;
+        minX: number;
+        maxX: number;
+    };
+    ir: {
+        z: Float64Array[];
+        maxZ: number;
+        minZ: number;
+        minY: number;
+        maxY: number;
+        minX: number;
+        maxX: number;
+    };
+};

package/lib/xyz/util/phaseCorrection/applyOverReal.js

@@ -0,0 +1,27 @@
+"use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.applyOverReal = void 0;
+const checkNmrData2DTwoQuad_1 = require("./checkNmrData2DTwoQuad");
+const ml_matrix_1 = __importDefault(require("ml-matrix"));
+const getZMinMax_1 = require("./getZMinMax");
+function applyOverReal(data, options) {
+    const { applyPhaseCorrection } = options;
+    (0, checkNmrData2DTwoQuad_1.checkNmrData2DTwoQuad)(data);
+    const { re, im } = applyPhaseCorrection({ re: ml_matrix_1.default.checkMatrix(data.rr.z), im: ml_matrix_1.default.checkMatrix(data.ir.z) }, options);
+    return {
+        ...data,
+        rr: {
+            ...data.rr,
+            ...(0, getZMinMax_1.getZMinMax)(re),
+        },
+        ir: {
+            ...data.ir,
+            ...(0, getZMinMax_1.getZMinMax)(im),
+        },
+    };
+}
+exports.applyOverReal = applyOverReal;
+//# sourceMappingURL=applyOverReal.js.map

package/lib/xyz/util/phaseCorrection/applyOverReal.js.map

@@ -0,0 +1 @@
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package/lib/xyz/util/phaseCorrection/checkNmrData2DFourQuad.d.ts

@@ -0,0 +1,3 @@
+import { NmrData2DFt } from 'cheminfo-types';
+export type NmrData2DFourQuadrant = Required<Pick<NmrData2DFt, 'rr' | 'ir' | 'ri' | 'ii'>>;
+export declare function checkNmrData2DFourQuad(data: NmrData2DFt): asserts data is NmrData2DFourQuadrant;

package/lib/xyz/util/phaseCorrection/checkNmrData2DFourQuad.js

@@ -0,0 +1,10 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.checkNmrData2DFourQuad = void 0;
+function checkNmrData2DFourQuad(data) {
+    if (!('ir' in data)) {
+        throw new Error('four quadrants should has ir, ri and ii quadrants');
+    }
+}
+exports.checkNmrData2DFourQuad = checkNmrData2DFourQuad;
+//# sourceMappingURL=checkNmrData2DFourQuad.js.map

package/lib/xyz/util/phaseCorrection/checkNmrData2DFourQuad.js.map

@@ -0,0 +1 @@
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package/lib/xyz/util/phaseCorrection/checkNmrData2DTwoQuad.d.ts

@@ -0,0 +1,3 @@
+import { NmrData2DFt } from 'cheminfo-types';
+export type NmrData2DTwoQuadrant = Required<Pick<NmrData2DFt, 'rr' | 'ir'>>;
+export declare function checkNmrData2DTwoQuad(data: NmrData2DFt): asserts data is NmrData2DTwoQuadrant;