nmr-processing 9.7.7 → 9.7.9-pre.1690349439

package/lib/xyz/util/fft2d/fftIndirectDimension.js

@@ -16,8 +16,9 @@ function fftIndirectDimension(data, options) {
     const { zeroFilling: zeroFillingF1 } = options;
     const { factor: f1Factor = 2 } = zeroFillingF1 || {};
     const nbPointsF1 = zeroFillingF1?.nbPoints || 2 ** Math.round(Math.log2(nbRows * f1Factor));
-    const { apodization: apodizationF1 } = options;
-    let { ph0: ph0F1, ph1: ph1F1, mode: pcModeF1, } = options.phaseCorrection || {};
+    const { apodization: apodizationF1, phaseCorrection = {} } = options;
+    let { ph0: ph0F1, ph1: ph1F1 } = phaseCorrection;
+    const pcModeF1 = phaseCorrection.mode;
     const reResult = new ml_matrix_1.default(nbPointsF1, nbColumns);
     const imResult = new ml_matrix_1.default(nbPointsF1, nbColumns);
     for (let i = 0; i < nbColumns; i++) {
@@ -27,7 +28,7 @@ function fftIndirectDimension(data, options) {
         }, apodizationF1);
         const newRe = [];
         const newIm = [];
-        if (options.fnMode === 'echo') {
+        if (options.fnMode?.toLowerCase() === 'echo-antiecho') {
             for (let j = 0; j < aRe.length; j += 2) {
                 newRe.push(aRe[j]);
                 newIm.push(aRe[j + 1]);
@@ -39,7 +40,7 @@ function fftIndirectDimension(data, options) {
                 newIm.push(-aIm[j]);
             }
         }
-        let transformed = (0, ml_spectra_processing_1.reimFFT)((0, zeroFilling_1.zeroFilling)({
+        const transformed = (0, ml_spectra_processing_1.reimFFT)((0, zeroFilling_1.zeroFilling)({
             re: newRe,
             im: newIm,
         }, { digitalFilterValue: 0, nbPoints: nbPointsF1 }), { applyZeroShift: true });

package/lib/xyz/util/fft2d/fftIndirectDimension.js.map

@@ -1 +1 @@
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+{"version":3,"file":"fftIndirectDimension.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/fftIndirectDimension.ts"],"names":[],"mappings":";;;;;;AACA,0DAA+B;AAC/B,iEAK+B;AAE/B,kEAG0C;AAE1C,+CAAgE;AAehE,SAAgB,oBAAoB,CAClC,IAAgE,EAChE,OAAiC;IAEjC,MAAM,MAAM,GAAG,mBAAM,CAAC,WAAW,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC3C,MAAM,MAAM,GAAG,mBAAM,CAAC,WAAW,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAE3C,MAAM,MAAM,GAAG,MAAM,CAAC,IAAI,CAAC;IAC3B,MAAM,SAAS,GAAG,MAAM,CAAC,OAAO,CAAC;IAEjC,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,GAAG,OAAO,CAAC;IAC/C,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,CAAC,EAAE,GAAG,aAAa,IAAI,EAAE,CAAC;IACrD,MAAM,UAAU,GACd,aAAa,EAAE,QAAQ,IAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,MAAM,GAAG,QAAQ,CAAC,CAAC,CAAC;IAC3E,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,eAAe,GAAG,EAAE,EAAE,GAAG,OAAO,CAAC;IAErE,IAAI,EAAE,GAAG,EAAE,KAAK,EAAE,GAAG,EAAE,KAAK,EAAE,GAAG,eAAe,CAAC;IACjD,MAAM,QAAQ,GAAG,eAAe,CAAC,IAAI,CAAC;IAEtC,MAAM,QAAQ,GAAG,IAAI,mBAAM,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC;IACnD,MAAM,QAAQ,GAAG,IAAI,mBAAM,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC;IACnD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,EAAE,CAAC,EAAE,EAAE;QAClC,MAAM,EAAE,EAAE,EAAE,GAAG,EAAE,EAAE,EAAE,GAAG,EAAE,GAAG,IAAA,yBAAW,EACtC;YACE,EAAE,EAAE,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC;YACvB,EAAE,EAAE,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC;SACxB,EACD,aAAa,CACd,CAAC;QAEF,MAAM,KAAK,GAAG,EAAE,CAAC;QACjB,MAAM,KAAK,GAAG,EAAE,CAAC;QACjB,IAAI,OAAO,CAAC,MAAM,EAAE,WAAW,EAAE,KAAK,eAAe,EAAE;YACrD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,EAAE;gBACtC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;aACxB;SACF;aAAM;YACL,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;gBACnC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,KAAK,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;aACrB;SACF;QAED,MAAM,WAAW,GAAG,IAAA,+BAAO,EACzB,IAAA,yBAAW,EACT;YACE,EAAE,EAAE,KAAK;YACT,EAAE,EAAE,KAAK;SACV,EACD,EAAE,kBAAkB,EAAE,CAAC,EAAE,QAAQ,EAAE,UAAU,EAAE,CAChD,EACD,EAAE,cAAc,EAAE,IAAI,EAAE,CACzB,CAAC;QACF,IAAI,EAAE,EAAE,EAAE,EAAE,EAAE,GAAG,WAAW,CAAC;QAE7B,IAAI,OAAO,CAAC,eAAe,EAAE,IAAI,KAAK,IAAI,EAAE;YAC1C,EAAE,GAAG,IAAA,oCAAY,EAAC,EAAE,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC;YAC9B,EAAE,GAAG,IAAI,YAAY,CAAC,EAAE,CAAC,MAAM,CAAC,CAAC;SAClC;QAED,IAAI,QAAQ,KAAK,IAAI,EAAE;YACrB,IAAI,CAAC,KAAK,CAAC,IAAI,KAAK,KAAK,SAAS,IAAI,KAAK,KAAK,SAAS,EAAE;gBACzD,0EAA0E;gBAC1E,MAAM,MAAM,GAAG,IAAA,+CAAuB,EACpC,EAAE,EAAE,EAAE,EAAE,EAAE,EACV,EAAE,aAAa,EAAE,KAAK,EAAE,CACzB,CAAC;gBACF,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC;gBACnB,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC;aACpB;YACD,IAAI,KAAK,KAAK,SAAS,IAAI,KAAK,KAAK,SAAS,EAAE;gBAC9C,MAAM,CAAC,MAAM,CACX,WAAW,EACX,IAAA,2CAAmB,EACjB,WAAW,EACX,CAAC,KAAK,GAAG,IAAI,CAAC,EAAE,CAAC,GAAG,GAAG,EACvB,CAAC,KAAK,GAAG,IAAI,CAAC,EAAE,CAAC,GAAG,GAAG,CACxB,CACF,CAAC;aACH;SACF;QAED,QAAQ,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;QAC1B,QAAQ,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;KAC3B;IAED,OAAO;QACL,EAAE,EAAE,QAAQ;QACZ,EAAE,EAAE,QAAQ;KACb,CAAC;AACJ,CAAC;AA3FD,oDA2FC"}

package/lib/xyz/util/fft2d/removeDCOffset.js

@@ -3,7 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.removeDCOffset = void 0;
 const ml_spectra_processing_1 = require("ml-spectra-processing");
 function removeDCOffset(data, options) {
-    let { digitalFilterValue = 0 } = options;
+    const { digitalFilterValue = 0 } = options;
     const nbPoints = data.re.length;
     const newRe = new Float64Array(data.re);
     const newIm = new Float64Array(data.im);

package/lib/xyz/util/fft2d/removeDCOffset.js.map

@@ -1 +1 @@
-{"version":3,"file":"removeDCOffset.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/removeDCOffset.ts"],"names":[],"mappings":";;;AAAA,iEAAwD;AAExD,SAAgB,cAAc,CAAC,IAAc,EAAE,OAAY;IACzD,IAAI,EAAE,kBAAkB,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;IACzC,MAAM,QAAQ,GAAG,IAAI,CAAC,EAAE,CAAC,MAAM,CAAC;IAChC,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACxC,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACxC,MAAM,SAAS,GAAG,IAAA,6BAAK,EACrB,IAAI,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,EAAE,QAAQ,GAAG,kBAAkB,CAAC,CACrE,CAAC;IACF,MAAM,SAAS,GAAG,IAAA,6BAAK,EACrB,IAAI,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,EAAE,QAAQ,GAAG,kBAAkB,CAAC,CACrE,CAAC;IACF,KAAK,IAAI,CAAC,GAAG,kBAAkB,EAAE,CAAC,GAAG,QAAQ,GAAG,kBAAkB,EAAE,CAAC,EAAE,EAAE;QACvE,KAAK,CAAC,CAAC,CAAC,IAAI,SAAS,CAAC;QACtB,KAAK,CAAC,CAAC,CAAC,IAAI,SAAS,CAAC;KACvB;IACD,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC;AAhBD,wCAgBC"}
+{"version":3,"file":"removeDCOffset.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/removeDCOffset.ts"],"names":[],"mappings":";;;AAAA,iEAAwD;AAExD,SAAgB,cAAc,CAAC,IAAc,EAAE,OAAY;IACzD,MAAM,EAAE,kBAAkB,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;IAC3C,MAAM,QAAQ,GAAG,IAAI,CAAC,EAAE,CAAC,MAAM,CAAC;IAChC,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACxC,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACxC,MAAM,SAAS,GAAG,IAAA,6BAAK,EACrB,IAAI,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,EAAE,QAAQ,GAAG,kBAAkB,CAAC,CACrE,CAAC;IACF,MAAM,SAAS,GAAG,IAAA,6BAAK,EACrB,IAAI,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,EAAE,QAAQ,GAAG,kBAAkB,CAAC,CACrE,CAAC;IACF,KAAK,IAAI,CAAC,GAAG,kBAAkB,EAAE,CAAC,GAAG,QAAQ,GAAG,kBAAkB,EAAE,CAAC,EAAE,EAAE;QACvE,KAAK,CAAC,CAAC,CAAC,IAAI,SAAS,CAAC;QACtB,KAAK,CAAC,CAAC,CAAC,IAAI,SAAS,CAAC;KACvB;IACD,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC;AAhBD,wCAgBC"}

package/lib/xyz/util/fft2d/zeroFilling.js

@@ -2,10 +2,8 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.zeroFilling = void 0;
 function zeroFilling(data, options) {
-    let { nbPoints, factor = 2, digitalFilterValue: grpdly = 0 } = options;
-    if (!nbPoints) {
-        nbPoints = 2 ** Math.round(Math.log2(data.re.length * factor));
-    }
+    const { factor = 2, digitalFilterValue: grpdly = 0 } = options;
+    const nbPoints = options.nbPoints || 2 ** Math.round(Math.log2(data.re.length * factor));
     let pointsToShift;
     if (grpdly > 0) {
         pointsToShift = Math.floor(grpdly);
@@ -14,8 +12,8 @@ function zeroFilling(data, options) {
         pointsToShift = 0;
     }
     const { re, im } = data;
-    let newRE = new Float64Array(nbPoints);
-    let newIM = new Float64Array(nbPoints);
+    const newRE = new Float64Array(nbPoints);
+    const newIM = new Float64Array(nbPoints);
     const length = Math.min(nbPoints, re.length);
     newRE.set(re.slice(0, length - pointsToShift));
     newIM.set(im.slice(0, length - pointsToShift));

package/lib/xyz/util/fft2d/zeroFilling.js.map

@@ -1 +1 @@
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+{"version":3,"file":"zeroFilling.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/zeroFilling.ts"],"names":[],"mappings":";;;AAQA,SAAgB,WAAW,CAAC,IAAc,EAAE,OAA2B;IACrE,MAAM,EAAE,MAAM,GAAG,CAAC,EAAE,kBAAkB,EAAE,MAAM,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;IAE/D,MAAM,QAAQ,GACZ,OAAO,CAAC,QAAQ,IAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,MAAM,GAAG,MAAM,CAAC,CAAC,CAAC;IAE1E,IAAI,aAAa,CAAC;IAClB,IAAI,MAAM,GAAG,CAAC,EAAE;QACd,aAAa,GAAG,IAAI,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;KACpC;SAAM;QACL,aAAa,GAAG,CAAC,CAAC;KACnB;IAED,MAAM,EAAE,EAAE,EAAE,EAAE,EAAE,GAAG,IAAI,CAAC;IAExB,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,QAAQ,CAAC,CAAC;IACzC,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,QAAQ,CAAC,CAAC;IAEzC,MAAM,MAAM,GAAG,IAAI,CAAC,GAAG,CAAC,QAAQ,EAAE,EAAE,CAAC,MAAM,CAAC,CAAC;IAE7C,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,MAAM,GAAG,aAAa,CAAC,CAAC,CAAC;IAC/C,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,MAAM,GAAG,aAAa,CAAC,CAAC,CAAC;IAE/C,IAAI,aAAa,GAAG,CAAC,IAAI,aAAa,GAAG,QAAQ,EAAE;QACjD,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,MAAM,GAAG,aAAa,CAAC,EAAE,QAAQ,GAAG,aAAa,CAAC,CAAC;QACzE,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,MAAM,GAAG,aAAa,CAAC,EAAE,QAAQ,GAAG,aAAa,CAAC,CAAC;KAC1E;IAED,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC;AA7BD,kCA6BC"}

package/lib/xyz/util/formatZone.js

@@ -3,10 +3,10 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.formatZones = void 0;
 const uuid_1 = require("@lukeed/uuid");
 function formatZones(signals) {
-    let zones = [];
+    const zones = [];
     for (const signal of signals) {
-        let minMax1 = [Number.MAX_VALUE, 0];
-        let minMax2 = [Number.MAX_VALUE, 0];
+        const minMax1 = [Number.MAX_VALUE, 0];
+        const minMax2 = [Number.MAX_VALUE, 0];
         for (const peak of signal.peaks || []) {
             if (peak.minX < minMax1[0]) {
                 minMax1[0] = peak.minX;

package/lib/xyz/util/formatZone.js.map

@@ -1 +1 @@
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+{"version":3,"file":"formatZone.js","sourceRoot":"","sources":["../../../src/xyz/util/formatZone.ts"],"names":[],"mappings":";;;AAAA,uCAAgD;AAKhD,SAAgB,WAAW,CAAC,OAA4B;IACtD,MAAM,KAAK,GAAoB,EAAE,CAAC;IAClC,KAAK,MAAM,MAAM,IAAI,OAAO,EAAE;QAC5B,MAAM,OAAO,GAAG,CAAC,MAAM,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC;QACtC,MAAM,OAAO,GAAG,CAAC,MAAM,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC;QACtC,KAAK,MAAM,IAAI,IAAI,MAAM,CAAC,KAAK,IAAI,EAAE,EAAE;YACrC,IAAI,IAAI,CAAC,IAAI,GAAG,OAAO,CAAC,CAAC,CAAC,EAAE;gBAC1B,OAAO,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,IAAI,CAAC;aACxB;YACD,IAAI,IAAI,CAAC,IAAI,GAAG,OAAO,CAAC,CAAC,CAAC,EAAE;gBAC1B,OAAO,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,IAAI,CAAC;aACxB;YACD,IAAI,IAAI,CAAC,IAAI,GAAG,OAAO,CAAC,CAAC,CAAC,EAAE;gBAC1B,OAAO,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,IAAI,CAAC;aACxB;YACD,IAAI,IAAI,CAAC,IAAI,GAAG,OAAO,CAAC,CAAC,CAAC,EAAE;gBAC1B,OAAO,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,IAAI,CAAC;aACxB;SACF;QACD,KAAK,CAAC,IAAI,CAAC;YACT,EAAE,EAAE,IAAA,SAAU,GAAE;YAChB,CAAC,EAAE;gBACD,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC;gBAChB,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;aACf;YACD,CAAC,EAAE;gBACD,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC;gBAChB,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;aACf;YACD,OAAO,EAAE,CAAC,MAAM,CAAC;SAClB,CAAC,CAAC;KACJ;IACD,OAAO,KAAK,CAAC;AACf,CAAC;AAjCD,kCAiCC"}

package/lib/xyz/util/getMinMaxXY.d.ts

@@ -0,0 +1,6 @@
+export declare function getMinMaxXY(info: any): {
+    minX: number;
+    maxX: number;
+    minY: number;
+    maxY: number;
+};

package/lib/xyz/util/getMinMaxXY.js

@@ -0,0 +1,23 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.getMinMaxXY = void 0;
+function getMinMaxXY(info) {
+    const min = [];
+    const max = [];
+    for (let i = 0; i < info.baseFrequency.length; i++) {
+        const baseFrequency = Number.parseFloat(info.baseFrequency[i]);
+        const frequencyOffset = Number.parseFloat(info.frequencyOffset[i]);
+        const spectralWidth = Number.parseFloat(info.spectralWidth[i]);
+        const offset = frequencyOffset / baseFrequency;
+        min.push(offset - spectralWidth * 0.5);
+        max.push(offset + spectralWidth * 0.5);
+    }
+    return {
+        minX: min[0],
+        maxX: max[0],
+        minY: min[1],
+        maxY: max[1],
+    };
+}
+exports.getMinMaxXY = getMinMaxXY;
+//# sourceMappingURL=getMinMaxXY.js.map

package/lib/xyz/util/getMinMaxXY.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getMinMaxXY.js","sourceRoot":"","sources":["../../../src/xyz/util/getMinMaxXY.ts"],"names":[],"mappings":";;;AAAA,SAAgB,WAAW,CAAC,IAAS;IACnC,MAAM,GAAG,GAAa,EAAE,CAAC;IACzB,MAAM,GAAG,GAAa,EAAE,CAAC;IACzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,aAAa,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;QAClD,MAAM,aAAa,GAAG,MAAM,CAAC,UAAU,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;QAC/D,MAAM,eAAe,GAAG,MAAM,CAAC,UAAU,CAAC,IAAI,CAAC,eAAe,CAAC,CAAC,CAAC,CAAC,CAAC;QACnE,MAAM,aAAa,GAAG,MAAM,CAAC,UAAU,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;QAC/D,MAAM,MAAM,GAAG,eAAe,GAAG,aAAa,CAAC;QAC/C,GAAG,CAAC,IAAI,CAAC,MAAM,GAAG,aAAa,GAAG,GAAG,CAAC,CAAC;QACvC,GAAG,CAAC,IAAI,CAAC,MAAM,GAAG,aAAa,GAAG,GAAG,CAAC,CAAC;KACxC;IAED,OAAO;QACL,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;QACZ,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;QACZ,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;QACZ,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;KACb,CAAC;AACJ,CAAC;AAlBD,kCAkBC"}

package/lib/xyz/util/padData.js

@@ -2,20 +2,20 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.padData = void 0;
 function padData(spectraData, options) {
-    let { minX, maxX, minY, maxY } = spectraData;
+    const { minX, maxX, minY, maxY } = spectraData;
     const width = options.width;
-    let nbPoints = spectraData.z[0].length;
-    let nbSubSpectra = spectraData.z.length;
-    let yInterval = (maxY - minY) / (nbSubSpectra - 1);
-    let xInterval = (maxX - minX) / (nbPoints - 1);
+    const nbPoints = spectraData.z[0].length;
+    const nbSubSpectra = spectraData.z.length;
+    const yInterval = (maxY - minY) / (nbSubSpectra - 1);
+    const xInterval = (maxX - minX) / (nbPoints - 1);
     let yDiff = width - nbSubSpectra;
     let xDiff = Math.max(width - nbPoints, 0);
     if (xDiff % 2)
         xDiff++;
     if (yDiff % 2)
         yDiff++;
-    let xOffset = xDiff / 2;
-    let yOffset = yDiff / 2;
+    const xOffset = xDiff / 2;
+    const yOffset = yDiff / 2;
     const newMatrix = [];
     for (let i = 0; i < nbSubSpectra + yDiff; i++) {
         newMatrix.push(new Float64Array(nbPoints + xDiff));

package/lib/xyz/util/padData.js.map

@@ -1 +1 @@
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+{"version":3,"file":"padData.js","sourceRoot":"","sources":["../../../src/xyz/util/padData.ts"],"names":[],"mappings":";;;AAEA,SAAgB,OAAO,CACrB,WAA6B,EAC7B,OAA0B;IAE1B,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,WAAW,CAAC;IAE/C,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC;IAE5B,MAAM,QAAQ,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IACzC,MAAM,YAAY,GAAG,WAAW,CAAC,CAAC,CAAC,MAAM,CAAC;IAE1C,MAAM,SAAS,GAAG,CAAC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,YAAY,GAAG,CAAC,CAAC,CAAC;IACrD,MAAM,SAAS,GAAG,CAAC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,QAAQ,GAAG,CAAC,CAAC,CAAC;IAEjD,IAAI,KAAK,GAAG,KAAK,GAAG,YAAY,CAAC;IACjC,IAAI,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,QAAQ,EAAE,CAAC,CAAC,CAAC;IAC1C,IAAI,KAAK,GAAG,CAAC;QAAE,KAAK,EAAE,CAAC;IACvB,IAAI,KAAK,GAAG,CAAC;QAAE,KAAK,EAAE,CAAC;IAEvB,MAAM,OAAO,GAAG,KAAK,GAAG,CAAC,CAAC;IAC1B,MAAM,OAAO,GAAG,KAAK,GAAG,CAAC,CAAC;IAE1B,MAAM,SAAS,GAAmB,EAAE,CAAC;IACrC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,YAAY,GAAG,KAAK,EAAE,CAAC,EAAE,EAAE;QAC7C,SAAS,CAAC,IAAI,CAAC,IAAI,YAAY,CAAC,QAAQ,GAAG,KAAK,CAAC,CAAC,CAAC;KACpD;IACD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,YAAY,EAAE,CAAC,EAAE,EAAE;QACrC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,EAAE,CAAC,EAAE,EAAE;YACjC,SAAS,CAAC,CAAC,GAAG,OAAO,CAAC,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,OAAO,CAAC,CAAC;SACvD;KACF;IAED,OAAO;QACL,GAAG,WAAW;QACd,CAAC,EAAE,SAAS;QACZ,IAAI,EAAE,IAAI,GAAG,OAAO,GAAG,SAAS;QAChC,IAAI,EAAE,IAAI,GAAG,OAAO,GAAG,SAAS;QAChC,IAAI,EAAE,IAAI,GAAG,OAAO,GAAG,SAAS;QAChC,IAAI,EAAE,IAAI,GAAG,OAAO,GAAG,SAAS;KACjC,CAAC;AACJ,CAAC;AAxCD,0BAwCC"}

package/lib/xyz/xyzAutoSignalsPicking.js

@@ -48,7 +48,8 @@ const smallFilter = [
     [0, 0, 1, 2, 2, 2, 1, 0, 0],
 ];
 function xyzAutoSignalsPicking(spectraData, options) {
-    let { sizeToPad = 14, realTopDetection = true, thresholdFactor = 0.5, nuclei = ['1H', '1H'], observedFrequencies, enhanceSymmetry = false, clean = true, maxPercentCutOff = 0.03, tolerances = [24, 24], convolutionByFFT = true, kernel: kernelOptions, } = options;
+    const { sizeToPad = 14, realTopDetection = true, nuclei = ['1H', '1H'], observedFrequencies, enhanceSymmetry = false, clean = true, maxPercentCutOff = 0.03, tolerances = [24, 24], convolutionByFFT = true, kernel: kernelOptions, } = options;
+    let { thresholdFactor = 0.5 } = options;
     if (!Array.isArray(observedFrequencies) &&
         !ArrayBuffer.isView(observedFrequencies)) {
         throw new Error('observedFrequencies is mandatory');
@@ -61,18 +62,18 @@ function xyzAutoSignalsPicking(spectraData, options) {
         nbPoints = spectraData.z[0].length;
         nbSubSpectra = spectraData.z.length;
     }
-    let absoluteData = new Float64Array(nbPoints * nbSubSpectra);
-    let originalData = new Float64Array(nbPoints * nbSubSpectra);
+    const absoluteData = new Float64Array(nbPoints * nbSubSpectra);
+    const originalData = new Float64Array(nbPoints * nbSubSpectra);
     for (let iSubSpectra = 0; iSubSpectra < nbSubSpectra; iSubSpectra++) {
-        let spectrum = spectraData.z[iSubSpectra];
+        const spectrum = spectraData.z[iSubSpectra];
         for (let iCol = 0; iCol < nbPoints; iCol++) {
-            let index = iSubSpectra * nbPoints + iCol;
+            const index = iSubSpectra * nbPoints + iCol;
             absoluteData[index] = Math.abs(spectrum[iCol]);
             originalData[index] = spectrum[iCol]; //@todo pensar si se puede evitar originalData
         }
     }
     const kernel = kernelOptions ? (0, getKernel_1.getKernel)(kernelOptions) : smallFilter;
-    let convolutedSpectrum = convolutionByFFT
+    const convolutedSpectrum = convolutionByFFT
         ? convolution.fft(absoluteData, kernel, {
             rows: nbSubSpectra,
             cols: nbPoints,
@@ -113,12 +114,12 @@ function xyzAutoSignalsPicking(spectraData, options) {
 }
 exports.xyzAutoSignalsPicking = xyzAutoSignalsPicking;
 function createSignals2D(peaks, options) {
-    let { nCols, nRows, absoluteData, originalData, observedFrequencies, tolerances, nuclei, realTopDetection, minY, maxY, minX, maxX, } = options;
-    let [nucleusX, nucleusY] = nuclei;
-    let [toleranceX, toleranceY] = tolerances;
-    let [observeFrequencyX, observeFrequencyY] = observedFrequencies;
-    let dy = (maxY - minY) / (nRows - 1);
-    let dx = (maxX - minX) / (nCols - 1);
+    const { nCols, nRows, absoluteData, originalData, observedFrequencies, tolerances, nuclei, realTopDetection, minY, maxY, minX, maxX, } = options;
+    const [nucleusX, nucleusY] = nuclei;
+    const [toleranceX, toleranceY] = tolerances;
+    const [observeFrequencyX, observeFrequencyY] = observedFrequencies;
+    const dy = (maxY - minY) / (nRows - 1);
+    const dx = (maxX - minX) / (nCols - 1);
     if (realTopDetection) {
         peaks = (0, determineRealTop_1.determineRealTop)(peaks, {
             nCols,
@@ -131,7 +132,7 @@ function createSignals2D(peaks, options) {
         });
     }
     for (let i = peaks.length - 1; i >= 0; i--) {
-        let { x, y } = peaks[i];
+        const { x, y } = peaks[i];
         peaks[i].x = minX + dx * x;
         peaks[i].y = minY + dy * y;
         peaks[i].minX = minX + dx * peaks[i].minX;
@@ -142,7 +143,7 @@ function createSignals2D(peaks, options) {
     }
     // The connectivity matrix is an square and symmetric matrix, so we'll only store the upper diagonal in an
     // array like form
-    let connectivity = [];
+    const connectivity = [];
     for (let i = 0; i < peaks.length; i++) {
         for (let j = i; j < peaks.length; j++) {
             if (Math.abs(peaks[i].x - peaks[j].x) * observeFrequencyX < toleranceX &&
@@ -155,11 +156,11 @@ function createSignals2D(peaks, options) {
             }
         }
     }
-    let clusters = (0, ml_simple_clustering_1.default)(connectivity);
-    let signals = [];
+    const clusters = (0, ml_simple_clustering_1.default)(connectivity);
+    const signals = [];
     if (clusters) {
         for (const cluster of clusters) {
-            let signal = {
+            const signal = {
                 id: (0, uuid_1.v4)(),
                 x: {
                     delta: 0,
@@ -172,7 +173,7 @@ function createSignals2D(peaks, options) {
                     resolution: dy,
                 },
             };
-            let peaks2D = [];
+            const peaks2D = [];
             let sumZ = 0;
             for (let jPeak = 0; jPeak < cluster.length; jPeak++) {
                 if (cluster[jPeak] === 1) {

package/lib/xyz/xyzAutoSignalsPicking.js.map

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+{"version":3,"file":"xyzAutoSignalsPicking.js","sourceRoot":"","sources":["../../src/xyz/xyzAutoSignalsPicking.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,uCAAgD;AAEhD,mEAAqD;AACrD,0EAA4D;AAE5D,gFAAoD;AAEpD,+DAA4D;AAC5D,qEAAkE;AAClE,uDAAoD;AAEpD,2EAA6D;AAI7D,4CAAyC;AAEzC,MAAM,WAAW,GAAG;IAClB,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IACjC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IACjC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IACjC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;CAC5B,CAAC;AA+DF,SAAgB,qBAAqB,CACnC,WAA6B,EAC7B,OAAqC;IAErC,MAAM,EACJ,SAAS,GAAG,EAAE,EACd,gBAAgB,GAAG,IAAI,EACvB,MAAM,GAAG,CAAC,IAAI,EAAE,IAAI,CAAC,EACrB,mBAAmB,EACnB,eAAe,GAAG,KAAK,EACvB,KAAK,GAAG,IAAI,EACZ,gBAAgB,GAAG,IAAI,EACvB,UAAU,GAAG,CAAC,EAAE,EAAE,EAAE,CAAC,EACrB,gBAAgB,GAAG,IAAI,EACvB,MAAM,EAAE,aAAa,GACtB,GAAG,OAAO,CAAC;IAEZ,IAAI,EAAE,eAAe,GAAG,GAAG,EAAE,GAAG,OAAO,CAAC;IAExC,IACE,CAAC,KAAK,CAAC,OAAO,CAAC,mBAAmB,CAAC;QACnC,CAAC,WAAW,CAAC,MAAM,CAAC,mBAAmB,CAAC,EACxC;QACA,MAAM,IAAI,KAAK,CAAC,kCAAkC,CAAC,CAAC;KACrD;IAED,eAAe,GAAG,eAAe,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,eAAe,CAAC,CAAC;IAExE,IAAI,QAAQ,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IACvC,IAAI,YAAY,GAAG,WAAW,CAAC,CAAC,CAAC,MAAM,CAAC;IAExC,IAAI,YAAY,GAAG,SAAS,EAAE;QAC5B,WAAW,GAAG,IAAA,iBAAO,EAAC,WAAW,EAAE,EAAE,KAAK,EAAE,SAAS,EAAE,CAAC,CAAC;QACzD,QAAQ,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;QACnC,YAAY,GAAG,WAAW,CAAC,CAAC,CAAC,MAAM,CAAC;KACrC;IAED,MAAM,YAAY,GAAG,IAAI,YAAY,CAAC,QAAQ,GAAG,YAAY,CAAC,CAAC;IAC/D,MAAM,YAAY,GAAG,IAAI,YAAY,CAAC,QAAQ,GAAG,YAAY,CAAC,CAAC;IAE/D,KAAK,IAAI,WAAW,GAAG,CAAC,EAAE,WAAW,GAAG,YAAY,EAAE,WAAW,EAAE,EAAE;QACnE,MAAM,QAAQ,GAAG,WAAW,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC;QAC5C,KAAK,IAAI,IAAI,GAAG,CAAC,EAAE,IAAI,GAAG,QAAQ,EAAE,IAAI,EAAE,EAAE;YAC1C,MAAM,KAAK,GAAG,WAAW,GAAG,QAAQ,GAAG,IAAI,CAAC;YAC5C,YAAY,CAAC,KAAK,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC;YAC/C,YAAY,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,8CAA8C;SACrF;KACF;IAED,MAAM,MAAM,GAAG,aAAa,CAAC,CAAC,CAAC,IAAA,qBAAS,EAAC,aAAa,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC;IAEtE,MAAM,kBAAkB,GAAG,gBAAgB;QACzC,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,YAAY,EAAE,MAAM,EAAE;YACpC,IAAI,EAAE,YAAY;YAClB,IAAI,EAAE,QAAQ;SACf,CAAC;QACJ,CAAC,CAAC,WAAW,CAAC,MAAM,CAAC,YAAY,EAAE,MAAM,EAAE;YACvC,IAAI,EAAE,YAAY;YAClB,IAAI,EAAE,QAAQ;SACf,CAAC,CAAC;IAEP,IAAI,QAAQ,GAAG,iBAAiB,CAAC,iBAAiB,CAAC,YAAY,EAAE;QAC/D,YAAY;QACZ,YAAY,EAAE,kBAAkB;QAChC,IAAI,EAAE,YAAY;QAClB,IAAI,EAAE,QAAQ;QACd,OAAO,EAAE,eAAe;KACzB,CAAC,CAAC;IAEH,IAAI,KAAK,EAAE;QACT,sEAAsE;QACtE,QAAQ,GAAG,aAAa,CAAC,KAAK,CAAC,QAAQ,EAAE,gBAAgB,CAAC,CAAC;KAC5D;IAED,IAAI,OAAO,GAAG,eAAe,CAAC,IAAA,6BAAa,EAAC,QAAQ,CAAC,EAAE;QACrD,KAAK,EAAE,YAAY;QACnB,KAAK,EAAE,QAAQ;QACf,IAAI,EAAE,WAAW,CAAC,IAAI;QACtB,IAAI,EAAE,WAAW,CAAC,IAAI;QACtB,IAAI,EAAE,WAAW,CAAC,IAAI;QACtB,IAAI,EAAE,WAAW,CAAC,IAAI;QACtB,YAAY;QACZ,YAAY;QACZ,UAAU;QACV,MAAM;QACN,mBAAmB;QACnB,gBAAgB;KACjB,CAAC,CAAC;IAEH,IAAI,eAAe,EAAE;QACnB,OAAO,GAAG,aAAa,CAAC,eAAe,CAAC,OAAO,CAAC,CAAC;KAClD;IAED,OAAO,OAAO,CAAC;AACjB,CAAC;AA9FD,sDA8FC;AAuBD,SAAS,eAAe,CACtB,KAAU,EACV,OAA+B;IAE/B,MAAM,EACJ,KAAK,EACL,KAAK,EACL,YAAY,EACZ,YAAY,EACZ,mBAAmB,EACnB,UAAU,EACV,MAAM,EACN,gBAAgB,EAChB,IAAI,EACJ,IAAI,EACJ,IAAI,EACJ,IAAI,GACL,GAAG,OAAO,CAAC;IAEZ,MAAM,CAAC,QAAQ,EAAE,QAAQ,CAAC,GAAG,MAAM,CAAC;IACpC,MAAM,CAAC,UAAU,EAAE,UAAU,CAAC,GAAG,UAAU,CAAC;IAC5C,MAAM,CAAC,iBAAiB,EAAE,iBAAiB,CAAC,GAAG,mBAAmB,CAAC;IAEnE,MAAM,EAAE,GAAG,CAAC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,CAAC,CAAC;IACvC,MAAM,EAAE,GAAG,CAAC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,CAAC,CAAC;IAEvC,IAAI,gBAAgB,EAAE;QACpB,KAAK,GAAG,IAAA,mCAAgB,EAAC,KAAK,EAAE;YAC9B,KAAK;YACL,YAAY;YACZ,YAAY;YACZ,IAAI;YACJ,IAAI;YACJ,IAAI;YACJ,IAAI;SACL,CAAC,CAAC;KACJ;IAED,KAAK,IAAI,CAAC,GAAG,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,EAAE;QAC1C,MAAM,EAAE,CAAC,EAAE,CAAC,EAAE,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC;QAC1B,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,GAAG,EAAE,GAAG,CAAC,CAAC;QAC3B,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,GAAG,EAAE,GAAG,CAAC,CAAC;QAC3B,KAAK,CAAC,CAAC,CAAC,CAAC,IAAI,GAAG,IAAI,GAAG,EAAE,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;QAC1C,KAAK,CAAC,CAAC,CAAC,CAAC,IAAI,GAAG,IAAI,GAAG,EAAE,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;QAC1C,KAAK,CAAC,CAAC,CAAC,CAAC,IAAI,GAAG,IAAI,GA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package/lib/xyz/xyzBidimensionalFFT.js

@@ -4,6 +4,7 @@ exports.xyzBidimensionalFFT = void 0;
 const quadrature_1 = require("./quadrature");
 const fftDirectDimension_1 = require("./util/fft2d/fftDirectDimension");
 const fftIndirectDimension_1 = require("./util/fft2d/fftIndirectDimension");
+const getMinMaxXY_1 = require("./util/getMinMaxXY");
 function xyzBidimensionalFFT(data, options) {
     ensureData2DFid(data);
     const { info, fnMode, digitalFilterValue = 0, zeroFilling: zeroFillingGeneral, } = options;
@@ -29,7 +30,7 @@ function xyzBidimensionalFFT(data, options) {
         fnMode,
         zeroFilling: { nbPoints: nbPointsF1 },
     });
-    const minMaxXY = getMinMaxXY(info);
+    const minMaxXY = (0, getMinMaxXY_1.getMinMaxXY)(info);
     return {
         re: {
             z: convertToDoubleArray(reResult),
@@ -58,22 +59,4 @@ function convertToDoubleArray(data) {
     }
     return result;
 }
-function getMinMaxXY(info) {
-    const min = [];
-    const max = [];
-    for (let i = 0; i < info.baseFrequency.length; i++) {
-        const baseFrequency = Number.parseFloat(info.baseFrequency[i]);
-        const frequencyOffset = Number.parseFloat(info.frequencyOffset[i]);
-        const spectralWidth = Number.parseFloat(info.spectralWidth[i]);
-        const offset = frequencyOffset / baseFrequency;
-        min.push(offset - spectralWidth * 0.5);
-        max.push(offset + spectralWidth * 0.5);
-    }
-    return {
-        minX: min[0],
-        maxX: max[0],
-        minY: min[1],
-        maxY: max[1],
-    };
-}
 //# sourceMappingURL=xyzBidimensionalFFT.js.map

package/lib/xyz/xyzBidimensionalFFT.js.map

@@ -1 +1 @@
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package/lib/xyz/xyzJResAnalyzer.js

@@ -11,10 +11,10 @@ const jAnalyzer_1 = __importDefault(require("../signals/utils/jAnalyzer"));
 const formatZone_1 = require("./util/formatZone");
 const { parse, stringify } = JSON;
 function xyzJResAnalyzer(signals, options = {}) {
-    let { reference = 0, getZones = false, referenceMaxShiftError = 0.08, tolerances = [10, 100], nuclei = ['1H', '1H'], observedFrequencies = [400, 400], jAnalyzer = {
+    const { reference = 0, getZones = false, referenceMaxShiftError = 0.08, tolerances = [10, 100], nuclei = ['1H', '1H'], observedFrequencies = [400, 400], jAnalyzer = {
         jAxisKey: { jAxis: 'y', intensity: 'z' },
     }, } = options;
-    let temporalSignals = compilePattern(signals, {
+    const temporalSignals = compilePattern(signals, {
         observedFrequencies,
         tolerances,
         nuclei,
@@ -23,7 +23,7 @@ function xyzJResAnalyzer(signals, options = {}) {
     //check if the signal are symmetric around the reference
     let signals2D = [];
     for (const tempSignal of temporalSignals) {
-        let delta = tempSignal.y.delta;
+        const delta = tempSignal.y.delta;
         if (Math.abs(delta - reference) > referenceMaxShiftError)
             continue;
         signals2D.push(tempSignal);
@@ -33,8 +33,8 @@ function xyzJResAnalyzer(signals, options = {}) {
 }
 exports.xyzJResAnalyzer = xyzJResAnalyzer;
 function compilePattern(signals, options) {
-    let { observedFrequencies, tolerances, nuclei, jAnalyzer: jAnalyzerOptions, } = options;
-    let signalOptions = {
+    const { observedFrequencies, tolerances, nuclei, jAnalyzer: jAnalyzerOptions, } = options;
+    const signalOptions = {
         observedFrequencies,
         tolerances,
         nuclei,
@@ -45,7 +45,7 @@ function compilePattern(signals, options) {
     const newSignals = [];
     //adapt to 1D jAnalyzer
     for (const signal of signals) {
-        let peaks = [];
+        const peaks = [];
         for (const peak of signal.peaks || []) {
             peaks.push({
                 ...peak,
@@ -75,10 +75,10 @@ function compilePattern(signals, options) {
             signal.multiplicity !== 'm' &&
             signal.multiplicity !== '') {
             // Create a new signal with the removed peaks
-            let peaksO = [];
+            const peaksO = [];
             for (let j = signal.maskPattern.length - 1; j >= 0; j--) {
                 if (!signal.maskPattern[j]) {
-                    let peakR = signal.peaks.splice(j, 1)[0];
+                    const peakR = signal.peaks.splice(j, 1)[0];
                     peaksO.push(peakR);
                     signal.mask.splice(j, 1);
                     signal.mask2?.splice(j, 1);
@@ -88,7 +88,7 @@ function compilePattern(signals, options) {
             }
             if (peaksO.length > 0) {
                 peaksO.reverse();
-                let signals2D = createSignals2D(peaksO, signalOptions);
+                const signals2D = createSignals2D(peaksO, signalOptions);
                 for (const signal of signals2D) {
                     newSignals.push(signal);
                 }
@@ -101,14 +101,14 @@ function compilePattern(signals, options) {
     return signals;
 }
 function createSignals2D(peaksInput, options) {
-    let { observedFrequencies, tolerances, nuclei, dx, dy } = options;
+    const { observedFrequencies, tolerances, nuclei, dx, dy } = options;
     const peaks = parse(stringify(peaksInput));
-    let [nucleusX, nucleusY] = nuclei;
-    let [toleranceX, toleranceY] = tolerances;
-    let [observeFrequencyX, observeFrequencyY] = observedFrequencies;
+    const [nucleusX, nucleusY] = nuclei;
+    const [toleranceX, toleranceY] = tolerances;
+    const [observeFrequencyX, observeFrequencyY] = observedFrequencies;
     // The connectivity matrix is an square and symmetric matrix, so we'll only store the upper diagonal in an
     // array like form
-    let connectivity = [];
+    const connectivity = [];
     for (let i = 0; i < peaks.length; i++) {
         for (let j = i; j < peaks.length; j++) {
             if (Math.abs(peaks[i].x - peaks[j].x) * observeFrequencyX < toleranceX &&
@@ -121,11 +121,11 @@ function createSignals2D(peaksInput, options) {
             }
         }
     }
-    let clusters = (0, ml_simple_clustering_1.default)(connectivity);
-    let signals = [];
+    const clusters = (0, ml_simple_clustering_1.default)(connectivity);
+    const signals = [];
     if (clusters) {
-        for (let cluster of clusters) {
-            let signal = {
+        for (const cluster of clusters) {
+            const signal = {
                 id: (0, uuid_1.v4)(),
                 nucleusX,
                 nucleusY,
@@ -142,9 +142,9 @@ function createSignals2D(peaksInput, options) {
                 shiftX: 0,
                 shiftY: 0,
             };
-            let peaks2D = [];
-            let minMax1 = [Number.MAX_VALUE, 0];
-            let minMax2 = [Number.MAX_VALUE, 0];
+            const peaks2D = [];
+            const minMax1 = [Number.MAX_VALUE, 0];
+            const minMax2 = [Number.MAX_VALUE, 0];
             let sumZ = 0;
             for (let jPeak = cluster.length - 1; jPeak >= 0; jPeak--) {
                 if (cluster[jPeak] === 1) {

package/lib/xyz/xyzJResAnalyzer.js.map

@@ -1 +1 @@
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package/lib-esm/apodization/compose.js

@@ -3,7 +3,7 @@ import { getFunction } from './getFunction';
 import { getData } from './utils/getData';
 export function compose(shapeOptions) {
     const { length: dataLength, shapes = [] } = shapeOptions;
-    let data = new Float64Array(dataLength).fill(1);
+    const data = new Float64Array(dataLength).fill(1);
     shapes.forEach((options) => {
         const { shape, start = 0 } = options;
         const { options: shapeOptions } = shape;

package/lib-esm/apodization/compose.js.map

@@ -1 +1 @@
-{"version":3,"file":"compose.js","sourceRoot":"","sources":["../../src/apodization/compose.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAC5C,OAAO,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAE5C,OAAO,EAAE,OAAO,EAAE,MAAM,iBAAiB,CAAC;AAyB1C,MAAM,UAAU,OAAO,CAAC,YAA0B;IAChD,MAAM,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,GAAG,EAAE,EAAE,GAAG,YAAY,CAAC;IACzD,IAAI,IAAI,GAAG,IAAI,YAAY,CAAC,UAAU,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAChD,MAAM,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,EAAE;QACzB,MAAM,EAAE,KAAK,EAAE,KAAK,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;QACrC,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,GAAG,KAAK,CAAC;QACxC,MAAM,MAAM,GACV,QAAQ,IAAI,YAAY,CAAC,CAAC,CAAC,YAAY,CAAC,MAAM,CAAC,CAAC,CAAC,UAAU,GAAG,KAAK,CAAC;QAEtE,MAAM,UAAU,GAAG,OAAO,CAAC,WAAW,CAAC,KAAK,CAAC,EAAE,MAAM,CAAC,CAAC;QAEvD,WAAW,CAAC,IAAI,EAAE;YAChB,UAAU;YACV,MAAM;YACN,KAAK;YACL,MAAM,EAAE,IAAI;SACb,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;IACH,OAAO,IAAI,CAAC;AACd,CAAC"}
+{"version":3,"file":"compose.js","sourceRoot":"","sources":["../../src/apodization/compose.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAC5C,OAAO,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAE5C,OAAO,EAAE,OAAO,EAAE,MAAM,iBAAiB,CAAC;AAyB1C,MAAM,UAAU,OAAO,CAAC,YAA0B;IAChD,MAAM,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,GAAG,EAAE,EAAE,GAAG,YAAY,CAAC;IACzD,MAAM,IAAI,GAAG,IAAI,YAAY,CAAC,UAAU,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClD,MAAM,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,EAAE;QACzB,MAAM,EAAE,KAAK,EAAE,KAAK,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;QACrC,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,GAAG,KAAK,CAAC;QACxC,MAAM,MAAM,GACV,QAAQ,IAAI,YAAY,CAAC,CAAC,CAAC,YAAY,CAAC,MAAM,CAAC,CAAC,CAAC,UAAU,GAAG,KAAK,CAAC;QAEtE,MAAM,UAAU,GAAG,OAAO,CAAC,WAAW,CAAC,KAAK,CAAC,EAAE,MAAM,CAAC,CAAC;QAEvD,WAAW,CAAC,IAAI,EAAE;YAChB,UAAU;YACV,MAAM;YACN,KAAK;YACL,MAAM,EAAE,IAAI;SACb,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;IACH,OAAO,IAAI,CAAC;AACd,CAAC"}

package/lib-esm/assignment/get13CAssignments.js

@@ -1,7 +1,7 @@
 import { v4 as generateID } from '@lukeed/uuid';
 import { addDiastereotopicMissingChirality } from 'openchemlib-utils';
 import { predictCarbon, } from '../prediction/predictCarbon';
-import { buildAssignments } from './utils/buildAssignments';
+import { buildAssignments, } from './utils/oneDimensionalAssignment/buildAssignments';
 function checkAtomsAndDiaIDs(signals) {
     for (const signal of signals) {
         if (!signal.atoms)
@@ -13,14 +13,14 @@ function checkAtomsAndDiaIDs(signals) {
     }
 }
 function checkIntegration(ranges) {
-    for (let range of ranges) {
+    for (const range of ranges) {
         if (range.integration === undefined)
             range.integration = 0;
     }
     return ranges;
 }
 export async function get13CAssignments(ranges, molecule, options = {}) {
-    let { restrictionByCS = {}, minScore = 1, maxSolutions = 10, nbAllowedUnAssigned = 0, timeout = 6000, predictionOptions = {}, } = options;
+    const { restrictionByCS = {}, minScore = 1, maxSolutions = 10, nbAllowedUnAssigned = 0, timeout = 6000, predictionOptions = {}, } = options;
     if (!molecule) {
         throw new Error('It is needed a OCL molecule instance to assign');
     }

package/lib-esm/assignment/get13CAssignments.js.map

@@ -1 +1 @@
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package/lib-esm/assignment/get1HAssignments.js

@@ -1,7 +1,7 @@
 import { v4 as generateID } from '@lukeed/uuid';
 import { addDiastereotopicMissingChirality } from 'openchemlib-utils';
 import { predictProton, } from '../prediction/predictProton';
-import { buildAssignments } from './utils/buildAssignments';
+import { buildAssignments, } from './utils/oneDimensionalAssignment/buildAssignments';
 function checkAtomsAndDiaIDs(signals) {
     for (const signal of signals) {
         if (!signal.atoms)
@@ -13,14 +13,14 @@ function checkAtomsAndDiaIDs(signals) {
     }
 }
 function checkForIntegration(ranges) {
-    for (let range of ranges) {
+    for (const range of ranges) {
         if (range.integration === undefined) {
             throw new Error('ranges has not integration property');
         }
     }
 }
 export async function get1HAssignments(ranges, molecule, options = {}) {
-    let { restrictionByCS, minScore = 1, maxSolutions = 10, nbAllowedUnAssigned = 0, timeout = 6000, predictionOptions = {}, } = options;
+    const { restrictionByCS, minScore = 1, maxSolutions = 10, nbAllowedUnAssigned = 0, timeout = 6000, predictionOptions = {}, } = options;
     if (!molecule) {
         throw new Error('It is needed a OCL molecule instance to assign');
     }