nexus-canon 1.1.0 → 1.2.0

package/dist/canonPull.d.ts

@@ -1,3 +1,4 @@
+import { type HarnessName } from './canonTools.js';
 export interface CanonStoreOptions {
     /** Canon store working clone (default /tmp/canon-store — off-quota; auto-cloned). */
     store?: string;
@@ -15,6 +16,8 @@ export interface CanonSession {
 export interface CanonPullOptions extends CanonStoreOptions {
     /** Session uuid (or unique prefix) to materialize. */
     session: string;
+    /** Target harness for the tool-compatibility report (default nexus-cortex — where pull lands). */
+    target?: HarnessName;
     /** Destination directory (default {home}/omniclaude-v4/.cortex/sessions). */
     to?: string;
     /** Overwrite an existing local session file (default false — pull is a branch, never a clobber). */

package/dist/canonPull.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"canonPull.d.ts","sourceRoot":"","sources":["../src/canonPull.ts"],"names":[],"mappings":"AAoBA,MAAM,WAAW,iBAAiB;IAChC,qFAAqF;IACrF,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,sFAAsF;IACtF,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;IACb,GAAG,EAAE,MAAM,CAAC;IACZ,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,gBAAiB,SAAQ,iBAAiB;IACzD,sDAAsD;IACtD,OAAO,EAAE,MAAM,CAAC;IAChB,6EAA6E;IAC7E,EAAE,CAAC,EAAE,MAAM,CAAC;IACZ,oGAAoG;IACpG,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;CACf;AAED,MAAM,WAAW,eAAe;IAC9B,0EAA0E;IAC1E,IAAI,EAAE,CAAC,GAAG,CAAC,CAAC;IACZ,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,YAAY,CAAC;CACxB;AAcD,kFAAkF;AAClF,wBAAgB,qBAAqB,CAAC,KAAK,EAAE,MAAM,GAAG,YAAY,EAAE,CA2CnE;AAED,qFAAqF;AACrF,wBAAsB,SAAS,CAAC,CAAC,GAAE,iBAAiB,GAAG;IAAE,GAAG,CAAC,EAAE,OAAO,CAAA;CAAO,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC,CAWtG;AAED,qEAAqE;AACrE,wBAAsB,SAAS,CAAC,CAAC,EAAE,gBAAgB,GAAG,OAAO,CAAC,eAAe,CAAC,CA8B7E"}
+{"version":3,"file":"canonPull.d.ts","sourceRoot":"","sources":["../src/canonPull.ts"],"names":[],"mappings":"AAmBA,OAAO,EAAqD,KAAK,WAAW,EAAE,MAAM,iBAAiB,CAAC;AAEtG,MAAM,WAAW,iBAAiB;IAChC,qFAAqF;IACrF,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,sFAAsF;IACtF,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;IACb,GAAG,EAAE,MAAM,CAAC;IACZ,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,gBAAiB,SAAQ,iBAAiB;IACzD,sDAAsD;IACtD,OAAO,EAAE,MAAM,CAAC;IAChB,kGAAkG;IAClG,MAAM,CAAC,EAAE,WAAW,CAAC;IACrB,6EAA6E;IAC7E,EAAE,CAAC,EAAE,MAAM,CAAC;IACZ,oGAAoG;IACpG,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;CACf;AAED,MAAM,WAAW,eAAe;IAC9B,0EAA0E;IAC1E,IAAI,EAAE,CAAC,GAAG,CAAC,CAAC;IACZ,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,YAAY,CAAC;CACxB;AAcD,kFAAkF;AAClF,wBAAgB,qBAAqB,CAAC,KAAK,EAAE,MAAM,GAAG,YAAY,EAAE,CA2CnE;AAED,qFAAqF;AACrF,wBAAsB,SAAS,CAAC,CAAC,GAAE,iBAAiB,GAAG;IAAE,GAAG,CAAC,EAAE,OAAO,CAAA;CAAO,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC,CAWtG;AAED,qEAAqE;AACrE,wBAAsB,SAAS,CAAC,CAAC,EAAE,gBAAgB,GAAG,OAAO,CAAC,eAAe,CAAC,CAqC7E"}

package/dist/canonPull.js

@@ -17,6 +17,7 @@
 import * as fs from 'node:fs';
 import * as path from 'node:path';
 import { execFileSync } from 'node:child_process';
+import { renderCompat, sessionToolNames, toolCompatibility } from './canonTools.js';
 /** Clone the store if absent, else pull — rehydrate freshness on arrival. */
 function ensureFreshStore(store, repoUrl, label = 'canon-pull') {
     const repo = repoUrl ?? process.env.CANON_REPO ?? 'https://github.com/Spitfire-Products/nexus-canon-store';
@@ -137,6 +138,15 @@ export async function canonPull(o) {
     console.log(`[canon-pull] materialized ${s.uuid} (${s.harness}${s.title ? ` — "${s.title}"` : ''})`);
     console.log(`[canon-pull]   ${lines} canonical message(s), ${(s.bytes / 1024).toFixed(0)}KB → ${dest}`);
     console.log(`[canon-pull]   resume with: cortex --resume ${s.uuid} "..."`);
+    // Phase E rung 1: the pull-time tool-ontology compatibility report — the
+    // receiving side learns up front which referenced tools are native, which
+    // map by name, and which need relay/re-expression (P4 ladder).
+    try {
+        const names = await sessionToolNames(dest);
+        if (names.length)
+            console.log(renderCompat(toolCompatibility(names, o.target ?? 'nexus-cortex')));
+    }
+    catch { /* report is best-effort — never block a pull */ }
     return { code: 0, dest, session: s };
 }
 //# sourceMappingURL=canonPull.js.map

package/dist/canonPull.js.map

@@ -1 +1 @@
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package/dist/canonTools.d.ts

@@ -0,0 +1,33 @@
+export type HarnessName = 'claude-code' | 'nexus-cortex' | 'grok-build' | 'gemini-cli';
+export declare const HARNESSES: HarnessName[];
+/**
+ * Canonical concept → per-harness tool names. Seeded from the observed
+ * four-harness corpus plus each CLI's documented surface; extend as the
+ * §27n roster lands. A name may map to several concepts' worth of behavior —
+ * rung 1 keeps it 1:1 on the dominant sense.
+ */
+export declare const TOOL_CONCEPTS: Record<string, Partial<Record<HarnessName, string[]>>>;
+export interface ToolInventory {
+    [harness: string]: Record<string, number>;
+}
+/** Scan the canonical line for observed tool_use names per harness. */
+export declare function deriveToolInventory(store: string): Promise<ToolInventory>;
+export interface ToolCompatReport {
+    target: HarnessName;
+    referenced: string[];
+    mapped: {
+        name: string;
+        concept: string;
+        targetNames: string[];
+    }[];
+    native: string[];
+    mcp: string[];
+    unmapped: string[];
+}
+/** Classify one session's tool references against a target harness. */
+export declare function toolCompatibility(referenced: string[], target: HarnessName): ToolCompatReport;
+/** Extract the tool_use names referenced in one canonical session file. */
+export declare function sessionToolNames(file: string): Promise<string[]>;
+/** Render the compatibility report for terminal output. */
+export declare function renderCompat(r: ToolCompatReport): string;
+//# sourceMappingURL=canonTools.d.ts.map

package/dist/canonTools.d.ts.map

@@ -0,0 +1 @@
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package/dist/canonTools.js

@@ -0,0 +1,152 @@
+/**
+ * canonTools — Phase E rung 1 of the tool-ontology ladder (layer 2 of the
+ * cross-harness handoff problem; CANON_CROSS_HARNESS_PLAN.md P4/§27r).
+ *
+ * Three levers:
+ *  - deriveToolInventory: the OBSERVED tool vocabulary per harness, scanned
+ *    from the canonical line itself (empirical, not spec-read).
+ *  - TOOL_CONCEPTS: the cross-harness name-mapping table, seeded from the
+ *    real four-harness corpus (2026-08-02) — canonical concept → per-harness
+ *    tool names. Rung 1 is the NAME map; arg-schema morphisms are rung 2.
+ *  - toolCompatibility: classify a session's tool references against a
+ *    target harness — the pull-time compatibility report. Key doctrine
+ *    (§27b): canon stores RESULTS, so comprehension of a foreign session is
+ *    never capability-bound; only future AGENCY needs mapping/relay.
+ *
+ * @module canonTools
+ */
+import * as fs from 'node:fs';
+import * as path from 'node:path';
+import * as readline from 'node:readline';
+export const HARNESSES = ['claude-code', 'nexus-cortex', 'grok-build', 'gemini-cli'];
+/**
+ * Canonical concept → per-harness tool names. Seeded from the observed
+ * four-harness corpus plus each CLI's documented surface; extend as the
+ * §27n roster lands. A name may map to several concepts' worth of behavior —
+ * rung 1 keeps it 1:1 on the dominant sense.
+ */
+export const TOOL_CONCEPTS = {
+    shell: { 'claude-code': ['Bash'], 'nexus-cortex': ['Bash'], 'grok-build': ['run_terminal_command'], 'gemini-cli': ['run_shell_command'] },
+    read_file: { 'claude-code': ['Read'], 'nexus-cortex': ['Read'], 'grok-build': ['read_file'], 'gemini-cli': ['read_file', 'read_many_files'] },
+    write_file: { 'claude-code': ['Write'], 'nexus-cortex': ['Write'], 'grok-build': ['write'], 'gemini-cli': ['write_file'] },
+    edit_file: { 'claude-code': ['Edit'], 'nexus-cortex': ['Edit'], 'grok-build': ['search_replace'], 'gemini-cli': ['replace'] },
+    list_dir: { 'nexus-cortex': ['ListDirectory'], 'grok-build': ['list_dir'], 'gemini-cli': ['list_directory'] },
+    glob: { 'claude-code': ['Glob'], 'nexus-cortex': ['Glob'], 'gemini-cli': ['glob'] },
+    grep: { 'claude-code': ['Grep'], 'nexus-cortex': ['Grep'], 'grok-build': ['grep'], 'gemini-cli': ['search_file_content'] },
+    web_search: { 'claude-code': ['WebSearch'], 'nexus-cortex': ['WebSearch'], 'grok-build': ['web_search'], 'gemini-cli': ['google_web_search'] },
+    web_fetch: { 'claude-code': ['WebFetch'], 'nexus-cortex': ['WebFetch'], 'gemini-cli': ['web_fetch'] },
+    spawn_agent: { 'claude-code': ['Agent'], 'nexus-cortex': ['Task'], 'gemini-cli': ['invoke_agent'] },
+    todo: { 'claude-code': ['TaskCreate', 'TaskUpdate'], 'nexus-cortex': ['TodoWrite', 'TodoCreate', 'TodoUpdate'] },
+    plan_mode: { 'claude-code': ['EnterPlanMode', 'ExitPlanMode'], 'gemini-cli': ['enter_plan_mode'] },
+    tool_search: { 'claude-code': ['ToolSearch'], 'nexus-cortex': ['SearchTools'] },
+    skill: { 'claude-code': ['Skill'], 'nexus-cortex': ['Skill'] },
+};
+/** name (per harness) → concept, inverted from TOOL_CONCEPTS. */
+function nameToConcept() {
+    const m = new Map();
+    for (const [concept, byHarness] of Object.entries(TOOL_CONCEPTS)) {
+        for (const names of Object.values(byHarness))
+            for (const n of names)
+                m.set(n, concept);
+    }
+    return m;
+}
+/** Scan the canonical line for observed tool_use names per harness. */
+export async function deriveToolInventory(store) {
+    const inv = {};
+    const root = path.join(store, 'canon');
+    const walk = async (dir, harness) => {
+        let es = [];
+        try {
+            es = fs.readdirSync(dir, { withFileTypes: true });
+        }
+        catch {
+            return;
+        }
+        for (const e of es) {
+            const p = path.join(dir, e.name);
+            if (e.isDirectory()) {
+                await walk(p, harness ?? (HARNESSES.includes(e.name) ? e.name : undefined));
+                continue;
+            }
+            if (!harness || e.name.endsWith('.events.jsonl') || !/\.jsonl(\.part-\d{4})?$/.test(e.name))
+                continue;
+            const rl = readline.createInterface({ input: fs.createReadStream(p), crlfDelay: Infinity });
+            for await (const line of rl) {
+                if (!line.includes('"tool_use"'))
+                    continue;
+                try {
+                    const r = JSON.parse(line);
+                    const c = r?.message?.content;
+                    if (!Array.isArray(c))
+                        continue;
+                    for (const b of c)
+                        if (b?.type === 'tool_use' && b.name)
+                            ((inv[harness] ??= {})[b.name] = (inv[harness][b.name] ?? 0) + 1);
+                }
+                catch { /* lint's job */ }
+            }
+        }
+    };
+    await walk(root);
+    return inv;
+}
+/** Classify one session's tool references against a target harness. */
+export function toolCompatibility(referenced, target) {
+    const n2c = nameToConcept();
+    const targetNames = new Set();
+    for (const byHarness of Object.values(TOOL_CONCEPTS))
+        for (const n of byHarness[target] ?? [])
+            targetNames.add(n);
+    const report = { target, referenced: [...referenced].sort(), mapped: [], native: [], mcp: [], unmapped: [] };
+    for (const name of report.referenced) {
+        if (name.startsWith('mcp__')) {
+            report.mcp.push(name);
+            continue;
+        }
+        if (targetNames.has(name)) {
+            report.native.push(name);
+            continue;
+        }
+        const concept = n2c.get(name);
+        const tn = concept ? TOOL_CONCEPTS[concept][target] : undefined;
+        if (concept && tn?.length)
+            report.mapped.push({ name, concept, targetNames: tn });
+        else
+            report.unmapped.push(name);
+    }
+    return report;
+}
+/** Extract the tool_use names referenced in one canonical session file. */
+export async function sessionToolNames(file) {
+    const names = new Set();
+    const rl = readline.createInterface({ input: fs.createReadStream(file), crlfDelay: Infinity });
+    for await (const line of rl) {
+        if (!line.includes('"tool_use"'))
+            continue;
+        try {
+            const c = JSON.parse(line)?.message?.content;
+            if (Array.isArray(c))
+                for (const b of c)
+                    if (b?.type === 'tool_use' && b.name)
+                        names.add(b.name);
+        }
+        catch { /* skip */ }
+    }
+    return [...names].sort();
+}
+/** Render the compatibility report for terminal output. */
+export function renderCompat(r) {
+    const lines = [];
+    lines.push(`[canon] tool compatibility vs ${r.target}: ${r.referenced.length} referenced — ` +
+        `${r.native.length} native, ${r.mapped.length} mapped, ${r.mcp.length} mcp, ${r.unmapped.length} unmapped`);
+    for (const m of r.mapped)
+        lines.push(`  map   ${m.name} → ${m.targetNames.join('|')} (${m.concept})`);
+    if (r.mcp.length)
+        lines.push(`  mcp   ${r.mcp.join(', ')} — attach the MCP server(s) or relay to origin`);
+    if (r.unmapped.length)
+        lines.push(`  gap   ${r.unmapped.join(', ')} — no rung-1 mapping: relay to origin harness or let the model re-express intent`);
+    lines.push(`  note  comprehension is unaffected either way — canon stores tool RESULTS verbatim; only future agency is capability-bound`);
+    return lines.join('\n');
+}
+//# sourceMappingURL=canonTools.js.map

package/dist/canonTools.js.map

@@ -0,0 +1 @@
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package/dist/canonTouched.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"canonTouched.d.ts","sourceRoot":"","sources":["../src/canonTouched.ts"],"names":[],"mappings":"AAoBA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC;AAEnD,MAAM,WAAW,YAAY;IAC3B,wGAAwG;IACxG,KAAK,EAAE,GAAG,CAAC,MAAM,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC,CAAC;IACxC,iGAAiG;IACjG,aAAa,EAAE,GAAG,CAAC,MAAM,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC,CAAC;IAChD,qEAAqE;IACrE,OAAO,EAAE,MAAM,CAAC;IAChB,MAAM,EAAE,MAAM,CAAC;CAChB;AAyBD;;;;;;;GAOG;AACH,wBAAgB,gBAAgB,CAAC,GAAG,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM,GAAG,SAAS,EAAE,GAAG,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,GAAG,IAAI,CA4BrG;AAsCD;;;GAGG;AACH,wBAAsB,iBAAiB,CACrC,QAAQ,EAAE,YAAY,EAAE,EACxB,IAAI,GAAE;IAAE,IAAI,CAAC,EAAE,MAAM,CAAA;CAAO,GAC3B,OAAO,CAAC,YAAY,CAAC,CA6DvB"}

package/dist/canonTouched.js

@@ -87,7 +87,7 @@ export function bashCommandPaths(cmd, cwd, out) {
     for (const m of text.matchAll(new RegExp(String.raw `\b(?:cat|head|tail)\s+(?:-\S+\s+)*` + TOKEN, 'g')))
         add(m[1]);
 }
-/** Extract touched absolute paths from one canon record. Two tiers:
+/** Extract touched absolute paths from one canon record. Tiers here:
  *  tier 1 — structured tool_use inputs (Read/Edit/Write file_path etc.);
  *  tier 2 — file-history-snapshot trackedFileBackups: the harness's own
  *  checkpoint tracker, which records EVERY mutated file regardless of
@@ -147,9 +147,19 @@ export async function buildTouchedIndex(sessions, opts = {}) {
     const inferredByRel = new Map();
     let scanned = 0, cached = 0;
     for (const s of sessions) {
-        const sig = 'v3|' + s.parts
+        // Sidecar participates in the signature: tier 2b mines file-history-delta
+        // events from <session>.events.jsonl, so sidecar changes must invalidate.
+        const logicalAbs = s.parts[0].replace(/\.part-\d{4}$/, '');
+        const sidecar = logicalAbs.replace(/\.jsonl$/, '.events.jsonl');
+        let sidecarSig = '0:0';
+        try {
+            const st = fs.statSync(sidecar);
+            sidecarSig = `${st.size}:${Math.round(st.mtimeMs)}`;
+        }
+        catch { /* none */ }
+        const sig = 'v4|' + s.parts
             .map((p) => { const st = fs.statSync(p); return `${st.size}:${Math.round(st.mtimeMs)}`; })
-            .join('|');
+            .join('|') + '|' + sidecarSig;
         const hit = cache[s.rel];
         if (hit && hit.sig === sig) {
             byRel.set(s.rel, new Map(Object.entries(hit.files)));
@@ -170,6 +180,24 @@ export async function buildTouchedIndex(sessions, opts = {}) {
                 catch { /* verify's job */ }
             }
         }
+        // Tier 2b — file-history-delta sidecar events: the harness's per-file
+        // change tracker fires for ANY mutation of a tracked file, including
+        // Bash/interpreter-body writes tier 3 cannot see. Harness-recorded fact
+        // => EXTRACTED-grade; one count per delta event.
+        if (fs.existsSync(sidecar)) {
+            const rl2 = readline.createInterface({ input: fs.createReadStream(sidecar), crlfDelay: Infinity });
+            for await (const line of rl2) {
+                if (!line.includes('file-history-delta'))
+                    continue;
+                try {
+                    const r = JSON.parse(line);
+                    const p = r?.trackingPath;
+                    if (typeof p === 'string' && p.startsWith('/'))
+                        files.set(p, (files.get(p) ?? 0) + 1);
+                }
+                catch { /* verify's job */ }
+            }
+        }
         for (const k of files.keys())
             inferred.delete(k); // structured evidence wins
         byRel.set(s.rel, files);

package/dist/canonTouched.js.map

@@ -1 +1 @@
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-{"version":3,"file":"cli.d.ts","sourceRoot":"","sources":["../src/cli.ts"],"names":[],"mappings":"AA4BA,wBAAsB,IAAI,CAAC,IAAI,GAAE,MAAM,EAA0B,GAAG,OAAO,CAAC,MAAM,CAAC,CAuClF"}
+{"version":3,"file":"cli.d.ts","sourceRoot":"","sources":["../src/cli.ts"],"names":[],"mappings":"AA8BA,wBAAsB,IAAI,CAAC,IAAI,GAAE,MAAM,EAA0B,GAAG,OAAO,CAAC,MAAM,CAAC,CAiDlF"}

package/dist/cli.js

@@ -8,6 +8,7 @@ import { canonGraph } from './canonGraph.js';
 import { canonInit } from './canonInit.js';
 import { canonList, canonPull } from './canonPull.js';
 import { canonSync } from './canonSync.js';
+import { deriveToolInventory, TOOL_CONCEPTS } from './canonTools.js';
 import { canonTranslate } from './canonTranslate.js';
 const USAGE = `nexus-canon — portable agent memory in a git repo you own
 
@@ -20,6 +21,7 @@ Verbs:
   list [--all] [--project N/A] [--store <dir>]  list canon sessions
   pull <uuid> [--to <dir>] [--force] [--store <dir>]  materialize a session
   artifacts [--dry-run] [--store <dir>]  capture capability artifacts
+  tools [--store <dir>] [--json]      observed tool inventory + cross-harness concept map
   graph [--project <id>] [--merge-graph <path>] [--dry-run] [--store <dir>]
 
 Default store: /tmp/canon-store (override with --store or CANON_REPO env for the remote).
@@ -57,6 +59,19 @@ export async function main(argv = process.argv.slice(2)) {
             const r = await canonPull({ session: positional, to: opt('--to'), force: flag('--force'), store: opt('--store') });
             return r.code;
         }
+        case 'tools': {
+            const inv = await deriveToolInventory(opt('--store') ?? '/tmp/canon-store');
+            if (flag('--json')) {
+                console.log(JSON.stringify({ inventory: inv, concepts: TOOL_CONCEPTS }, null, 2));
+                return 0;
+            }
+            for (const [h, tools] of Object.entries(inv)) {
+                const top = Object.entries(tools).sort((a, b) => b[1] - a[1]);
+                console.log(`${h} (${top.length} distinct): ${top.slice(0, 12).map(([n, c]) => `${n}:${c}`).join(', ')}`);
+            }
+            console.log(`concepts mapped: ${Object.keys(TOOL_CONCEPTS).length} (see TOOL_CONCEPTS via --json)`);
+            return 0;
+        }
         case 'artifacts':
             await canonArtifacts({ dryRun: flag('--dry-run'), store: opt('--store') });
             return 0;

package/dist/cli.js.map

@@ -1 +1 @@
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package/dist/index.d.ts

@@ -27,4 +27,6 @@ export type { CanonGraphOptions, CanonGraphResult, ProjectEntry } from './canonG
 export { CANON_VERIFY_MJS, GITATTRIBUTES, STORE_DIRS, STORE_README, VERIFY_YML } from './scaffoldAssets.js';
 export { buildTouchedIndex } from './canonTouched.js';
 export type { TouchedIndex } from './canonTouched.js';
+export { deriveToolInventory, toolCompatibility, sessionToolNames, renderCompat, TOOL_CONCEPTS, HARNESSES } from './canonTools.js';
+export type { ToolInventory, ToolCompatReport, HarnessName } from './canonTools.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AACH,OAAO,EAAE,SAAS,EAAE,MAAM,gBAAgB,CAAC;AAC3C,YAAY,EAAE,gBAAgB,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC;AACxE,OAAO,EAAE,SAAS,EAAE,MAAM,gBAAgB,CAAC;AAC3C,YAAY,EAAE,gBAAgB,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC;AACxE,OAAO,EAAE,cAAc,EAAE,MAAM,qBAAqB,CAAC;AACrD,YAAY,EAAE,qBAAqB,EAAE,oBAAoB,EAAE,MAAM,qBAAqB,CAAC;AACvF,OAAO,EAAE,SAAS,EAAE,SAAS,EAAE,qBAAqB,EAAE,MAAM,gBAAgB,CAAC;AAC7E,YAAY,EAAE,iBAAiB,EAAE,YAAY,EAAE,gBAAgB,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC;AACzG,OAAO,EAAE,cAAc,EAAE,MAAM,qBAAqB,CAAC;AACrD,YAAY,EAAE,qBAAqB,EAAE,oBAAoB,EAAE,MAAM,qBAAqB,CAAC;AACvF,OAAO,EAAE,UAAU,EAAE,uBAAuB,EAAE,cAAc,EAAE,MAAM,iBAAiB,CAAC;AACtF,YAAY,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AACzF,OAAO,EAAE,gBAAgB,EAAE,aAAa,EAAE,UAAU,EAAE,YAAY,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AAC5G,OAAO,EAAE,iBAAiB,EAAE,MAAM,mBAAmB,CAAC;AACtD,YAAY,EAAE,YAAY,EAAE,MAAM,mBAAmB,CAAC;AACtD,OAAO,EAAE,mBAAmB,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,YAAY,EAAE,aAAa,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AACnI,YAAY,EAAE,aAAa,EAAE,gBAAgB,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAC"}

package/dist/index.js

@@ -20,4 +20,5 @@ export { canonArtifacts } from './canonArtifacts.js';
 export { canonGraph, deriveProjectSessionMap, sessionProject } from './canonGraph.js';
 export { CANON_VERIFY_MJS, GITATTRIBUTES, STORE_DIRS, STORE_README, VERIFY_YML } from './scaffoldAssets.js';
 export { buildTouchedIndex } from './canonTouched.js';
+export { deriveToolInventory, toolCompatibility, sessionToolNames, renderCompat, TOOL_CONCEPTS, HARNESSES } from './canonTools.js';
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AACH,OAAO,EAAE,SAAS,EAAE,MAAM,gBAAgB,CAAC;AAE3C,OAAO,EAAE,SAAS,EAAE,MAAM,gBAAgB,CAAC;AAE3C,OAAO,EAAE,cAAc,EAAE,MAAM,qBAAqB,CAAC;AAErD,OAAO,EAAE,SAAS,EAAE,SAAS,EAAE,qBAAqB,EAAE,MAAM,gBAAgB,CAAC;AAE7E,OAAO,EAAE,cAAc,EAAE,MAAM,qBAAqB,CAAC;AAErD,OAAO,EAAE,UAAU,EAAE,uBAAuB,EAAE,cAAc,EAAE,MAAM,iBAAiB,CAAC;AAEtF,OAAO,EAAE,gBAAgB,EAAE,aAAa,EAAE,UAAU,EAAE,YAAY,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AAC5G,OAAO,EAAE,iBAAiB,EAAE,MAAM,mBAAmB,CAAC;AAEtD,OAAO,EAAE,mBAAmB,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,YAAY,EAAE,aAAa,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC"}

package/dist/scaffoldAssets.d.ts

@@ -14,7 +14,7 @@ export declare const VERIFY_YML = "# canon-verify \u2014 Phase A4 trust layer (C
 /** .github/scripts/canon-verify.mjs — dependency-free verification lint. */
 export declare const CANON_VERIFY_MJS = "/**\n * canon-verify \u2014 Phase A4 trust layer (CANON_CROSS_HARNESS_PLAN.md 27e).\n *\n * Verifies ONLY the files changed in a push/PR range. Four checks:\n *  1. JSONL integrity \u2014 every line of every changed *.jsonl / *.jsonl.part-NNNN\n *     parses as JSON (parts are split at line boundaries by construction).\n *  2. Canon schema \u2014 records in /canon (excluding *.events.jsonl sidecars)\n *     carry uuid, timestamp, type, provenance.\n *  3. Secret scan \u2014 the same pattern set the sync scrub applies (minus blanket\n *     hex64); any hit here means content bypassed the scrub choke-point.\n *  4. Projection refs \u2014 every changed *.ref resolves to an existing canon file\n *     (single form or .part-0000 chunked form).\n *\n * Failures are grouped, annotated (::error), and fatal \u2014 never silent (D8).\n * Staging form: graduates to the published library (`cortex canon verify`)\n * at Phase C; keep this dependency-free (bare node:*, no npm install).\n *\n * Usage: node canon-verify.mjs <baseRef> <headRef>\n */\nimport { execFileSync } from 'node:child_process';\nimport * as fs from 'node:fs';\nimport * as path from 'node:path';\n\nconst [base, head] = process.argv.slice(2);\nif (!base || !head) { console.error('usage: canon-verify.mjs <base> <head>'); process.exit(2); }\n\nconst git = (a) => execFileSync('git', a, { encoding: 'utf8', maxBuffer: 256 * 1024 * 1024 });\n\nconst SECRET_PATTERNS = [\n  ['sk', /sk-[A-Za-z0-9_-]{16,}/],\n  ['ghp', /ghp_[A-Za-z0-9]{20,}/],\n  ['ghpat', /github_pat_[A-Za-z0-9_]{20,}/],\n  ['ghu', /ghu_[A-Za-z0-9]{20,}/],\n  ['ghs', /ghs_[A-Za-z0-9]{20,}/],\n  ['hf', /hf_[A-Za-z0-9]{20,}/],\n  ['aiza', /AIza[A-Za-z0-9_-]{20,}/],\n  ['xai', /xai-[A-Za-z0-9]{20,}/],\n  ['nar', /nar_[A-Za-z0-9]{16,}/],\n  ['gsk', /gsk_[A-Za-z0-9]{20,}/],\n  ['slack', /xox[bpars]-[A-Za-z0-9-]{10,}/],\n  ['akia', /AKIA[A-Z0-9]{16}/],\n  ['jwt', /eyJ[A-Za-z0-9_-]{20,}\\.eyJ[A-Za-z0-9_-]{20,}\\.[A-Za-z0-9_-]{10,}/],\n];\n\nconst changed = git(['diff', '--name-only', '--diff-filter=ACMR', base, head])\n  .split('\\n').map((s) => s.trim()).filter(Boolean);\n\nconst isJsonl = (f) => /\\.jsonl(\\.part-\\d{4})?$/.test(f);\nconst isCanonRecordFile = (f) => f.startsWith('canon/') && isJsonl(f) && !/\\.events\\.jsonl$/.test(f);\nconst isRef = (f) => f.endsWith('.ref');\n\nconst failures = [];\nconst fail = (file, msg) => {\n  failures.push(`${file} \u2014 ${msg}`);\n  console.log(`::error file=${file}::${msg}`);\n};\n\nlet checkedFiles = 0, checkedLines = 0;\nfor (const f of changed) {\n  if (!fs.existsSync(f)) continue; // renamed-away edge\n  const isText = isJsonl(f) || isRef(f) || f.endsWith('.md') || f.endsWith('.json');\n  if (!isText) continue;\n  const content = fs.readFileSync(f, 'utf8');\n  checkedFiles++;\n\n  // 3. secret scan (report pattern label only \u2014 NEVER echo the match)\n  for (const [label, re] of SECRET_PATTERNS) {\n    if (re.test(content)) fail(f, `secret-pattern hit (${label}) \u2014 content bypassed the sync scrub`);\n  }\n\n  // 1 + 2. JSONL parse + canon schema + tool-pairing invariants.\n  // Pairing (Phase B lesson \u2014 defects here surface as provider 400s at resume\n  // time): every tool_result must follow a seen tool_use (orphans are the\n  // translator's job to repair), and only TAIL tool_use may go unanswered\n  // (live session snapshotted mid-call). Pairing is skipped on .part-NNNN\n  // chunks \u2014 pairs legitimately span part boundaries.\n  if (isJsonl(f)) {\n    const schema = isCanonRecordFile(f);\n    const checkPairs = schema && !/\\.part-\\d{4}$/.test(f);\n    const uses = new Map(); // id -> line of tool_use\n    const answered = new Set();\n    const uuids = new Set();\n    let lastRecordLine = 0;\n    let n = 0;\n    for (const line of content.split('\\n')) {\n      n++;\n      if (!line.trim()) continue;\n      checkedLines++;\n      let rec;\n      try { rec = JSON.parse(line); }\n      catch { fail(f, `line ${n}: unparseable JSON`); continue; }\n      if (schema) {\n        for (const field of ['uuid', 'timestamp', 'type', 'provenance']) {\n          if (rec[field] === undefined) fail(f, `line ${n}: canon record missing '${field}'`);\n        }\n      }\n      if (checkPairs) {\n        lastRecordLine = n;\n        // Chain integrity: parentUuid must resolve within the canonical line\n        // (append-only \u21D2 parents precede children). A dangling parent means a\n        // sidecarred/dropped record broke the chain \u2014 Claude Code's renderer\n        // silently EXCLUDES everything upstream of a break (a3.10 lesson: a\n        // 555KB doc vanished from rendered context).\n        if (rec.uuid) uuids.add(rec.uuid);\n        if (typeof rec.parentUuid === 'string' && !uuids.has(rec.parentUuid)) {\n          fail(f, `line ${n}: parentUuid ${rec.parentUuid} not found earlier in file \u2014 chain break (renderer will drop upstream context)`);\n        }\n        const blocks = Array.isArray(rec.message?.content) ? rec.message.content : [];\n        for (const b of blocks) {\n          if (b?.type === 'tool_use' && b.id) uses.set(b.id, n);\n          if (b?.type === 'tool_result' && b.tool_use_id) {\n            if (!uses.has(b.tool_use_id)) fail(f, `line ${n}: orphan tool_result (${b.tool_use_id}) \u2014 no prior tool_use; translator repair missing`);\n            answered.add(b.tool_use_id);\n          }\n        }\n      }\n    }\n    if (checkPairs) {\n      for (const [id, line] of uses) {\n        if (!answered.has(id) && lastRecordLine - line > 3) {\n          fail(f, `line ${line}: unanswered tool_use (${id}) mid-file \u2014 only tail in-flight calls may dangle`);\n        }\n      }\n    }\n  }\n\n  // 5. artifact-manifest schema (canon/artifacts/**.json \u2014 \u00A727p second record kind)\n  if (/^canon\\/artifacts\\/.+\\.json$/.test(f) && !f.endsWith('ARTIFACTS.md')) {\n    try {\n      const rec = JSON.parse(content);\n      for (const field of ['recordKind', 'kind', 'id', 'version', 'timestamp', 'primary', 'content', 'provenance']) {\n        if (rec[field] === undefined) fail(f, `artifact manifest missing '${field}'`);\n      }\n      if (rec.recordKind !== 'artifact-manifest') fail(f, `recordKind must be 'artifact-manifest'`);\n      if (!Array.isArray(rec.content) || rec.content.some((c) => !c.path || !c.ref)) fail(f, 'content entries need path+ref');\n    } catch { fail(f, 'artifact manifest: unparseable JSON'); }\n  }\n\n  // 4. projection refs resolve\n  if (isRef(f)) {\n    const target = content.trim();\n    if (!target || target.includes('\\n')) fail(f, 'ref must be a single store-relative path');\n    else if (!fs.existsSync(target) && !fs.existsSync(`${target}.part-0000`)) {\n      fail(f, `ref target not found: ${target}`);\n    }\n  }\n}\n\nif (failures.length) {\n  console.log(`[FAIL] canon-verify: ${failures.length} problem(s) in ${checkedFiles} changed file(s)`);\n  process.exit(1);\n}\nconsole.log(`[OK] canon-verify: ${checkedFiles} changed file(s), ${checkedLines} record line(s), 0 problems`);\n";
 /** README.md — layout, CI, token-scoping, and privacy guidance. */
-export declare const STORE_README = "# Canon store\n\nYour agent memory, in a git repo you own. Scaffolded by `cortex canon init`.\n\nThis repository is a **canonical agent history & memory store** (canon): sessions,\nmemory, plans, and capability artifacts from any harness, stored once in a\nprovider-neutral format and translated per consumer at the edges. Spec:\n[docs/CANON.md](https://github.com/Spitfire-Products/nexus-cortex/blob/main/docs/CANON.md)\nin the nexus-cortex repository.\n\n## Layout\n\n| Path | Owner | Carries |\n|---|---|---|\n| `/native/<harness>/` | agents | each harness's own session dialect, verbatim (the only path an agent writes) |\n| `/canon/` | tooling | the canonical line \u2014 translated, append-only, provenance-anchored |\n| `/projections/<harness>/` | tooling | canon fanned back out into each harness's dialect |\n| `/memory/` | agents | distilled memory files (index + detail) |\n| `/plans/`, `/projects/` | agents | plan docs + task state, project manifests \u2014 the intent layer |\n| `/skills/`, `/agents/`, `/mcp/`, `/plugins/` | agents | capability artifacts (harness-contract layer) |\n\n`*.jsonl` files use `merge=union` (see `.gitattributes`) so append-only concurrent\nappends auto-merge.\n\n## CI\n\n`.github/workflows/canon-verify.yml` lints changed files on every push/PR:\nJSONL integrity, canon record schema, tool-pairing/chain invariants, secret-pattern\nscan, projection-ref resolution. It never writes to the repo. Failures are grouped\nand fatal \u2014 never silent.\n\n## Access tokens\n\nPrefer a **fine-grained personal access token scoped to this single repository**\n(Contents: read/write). Never a classic all-repo token. If a workflow file itself\nmust be pushed, the pushing credential needs the `workflow` scope \u2014 grant it\ntemporarily, then revoke.\n\n## Privacy\n\nThis store may contain your working history. Keep the repository **private** by\ndefault. Scrub secrets before push (the CI secret scan is a tripwire, not the\nscrubber). `git clone --mirror` exits with your full history at any time \u2014 no\ntool or vendor holds it hostage.\n";
+export declare const STORE_README = "# Canon store\n\nYour agent memory, in a git repo you own. Scaffolded by `cortex canon init`.\n\nThis repository is a **canonical agent history & memory store** (canon): sessions,\nmemory, plans, and capability artifacts from any harness, stored once in a\nprovider-neutral format and translated per consumer at the edges. Spec:\n[docs/CANON.md](https://github.com/Spitfire-Products/nexus-cortex/blob/main/docs/CANON.md)\nin the nexus-cortex repository.\n\n## Layout\n\n| Path | Owner | Carries |\n|---|---|---|\n| `/native/<harness>/` | agents | each harness's own session dialect, verbatim (the only path an agent writes) |\n| `/canon/` | tooling | the canonical line \u2014 translated, append-only, provenance-anchored |\n| `/projections/<harness>/` | tooling | canon fanned back out into each harness's dialect |\n| `/memory/` | agents | distilled memory files (index + detail) |\n| `/plans/`, `/projects/` | agents | plan docs + task state, project manifests \u2014 the intent layer |\n| `/skills/`, `/agents/`, `/mcp/`, `/plugins/` | agents | capability artifacts (harness-contract layer) |\n\n`*.jsonl` files use `merge=union` (see `.gitattributes`) so append-only concurrent\nappends auto-merge.\n\n## CI\n\n`.github/workflows/canon-verify.yml` lints changed files on every push/PR:\nJSONL integrity, canon record schema, tool-pairing/chain invariants, secret-pattern\nscan, projection-ref resolution. It never writes to the repo. Failures are grouped\nand fatal \u2014 never silent.\n\n\n## Configuration (the levers)\n\n| File | Controls |\n|---|---|\n| `HARNESSES.json` (store root) | Which harnesses `canon sync` captures: `{ \"harnesses\": { \"<label>\": { \"exts\": [\".jsonl\"], \"roots\": [\"~/.tool/sessions\"] } } }` \u2014 adding a harness is config, not code |\n| `projects/ROOTS.json` | Project-map overrides for `canon list --project` / `canon graph`: `roots` (id \u2192 absolute path), `claudeDirs`, `cortexLabels`. Derivation from `$HOME` + the filesystem covers common cases; override dash-ambiguous paths, other machines' sessions, or sub-root labels |\n\n## Derived artifacts (regenerable, never source of truth)\n\n- `/projects/<id>.json` \u2014 derived project \u2194 session map\n- `/projects/<id>/graph.json` \u2014 project knowledge graph (NetworkX node-link;\n  history half = sessions/artifacts/touched edges; code half auto-folded from\n  `<project-root>/graphify-out/graph.json` when present; every edge\n  confidence-tagged). Rebuild anytime: `cortex canon graph` / `nexus-canon graph`\n- `/canon/artifacts/` \u2014 ArtifactManifest records for skills/agents/mcp/plugins/plans/projects\n\nFull CLI reference: `cortex canon --help` (or `nexus-canon` standalone) and the\nCANON.md spec + HARNESS_ONBOARDING.md protocol in the nexus-cortex repository.\n\n## Access tokens\n\nPrefer a **fine-grained personal access token scoped to this single repository**\n(Contents: read/write). Never a classic all-repo token. If a workflow file itself\nmust be pushed, the pushing credential needs the `workflow` scope \u2014 grant it\ntemporarily, then revoke.\n\n## Privacy\n\nThis store may contain your working history. Keep the repository **private** by\ndefault. Scrub secrets before push (the CI secret scan is a tripwire, not the\nscrubber). `git clone --mirror` exits with your full history at any time \u2014 no\ntool or vendor holds it hostage.\n";
 /** Directory taxonomy: session dimension + intent layer + artifact dimension. */
 export declare const STORE_DIRS: readonly ["native", "canon", "projections", "memory", "plans", "projects", "skills", "agents", "mcp", "plugins"];
 //# sourceMappingURL=scaffoldAssets.d.ts.map

package/dist/scaffoldAssets.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"scaffoldAssets.d.ts","sourceRoot":"","sources":["../src/scaffoldAssets.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,wEAAwE;AACxE,eAAO,MAAM,aAAa,0BAA0B,CAAC;AAErD,6EAA6E;AAC7E,eAAO,MAAM,UAAU,4yEAAkyE,CAAC;AAE1zE,4EAA4E;AAC5E,eAAO,MAAM,gBAAgB,+3NAAqyN,CAAC;AAEn0N,mEAAmE;AACnE,eAAO,MAAM,YAAY,uzGAAuzG,CAAC;AAEj1G,iFAAiF;AACjF,eAAO,MAAM,UAAU,kHAWb,CAAC"}

package/dist/scaffoldAssets.js

@@ -14,7 +14,7 @@ export const VERIFY_YML = "# canon-verify — Phase A4 trust layer (CANON_CROSS_
 /** .github/scripts/canon-verify.mjs — dependency-free verification lint. */
 export const CANON_VERIFY_MJS = "/**\n * canon-verify — Phase A4 trust layer (CANON_CROSS_HARNESS_PLAN.md 27e).\n *\n * Verifies ONLY the files changed in a push/PR range. Four checks:\n *  1. JSONL integrity — every line of every changed *.jsonl / *.jsonl.part-NNNN\n *     parses as JSON (parts are split at line boundaries by construction).\n *  2. Canon schema — records in /canon (excluding *.events.jsonl sidecars)\n *     carry uuid, timestamp, type, provenance.\n *  3. Secret scan — the same pattern set the sync scrub applies (minus blanket\n *     hex64); any hit here means content bypassed the scrub choke-point.\n *  4. Projection refs — every changed *.ref resolves to an existing canon file\n *     (single form or .part-0000 chunked form).\n *\n * Failures are grouped, annotated (::error), and fatal — never silent (D8).\n * Staging form: graduates to the published library (`cortex canon verify`)\n * at Phase C; keep this dependency-free (bare node:*, no npm install).\n *\n * Usage: node canon-verify.mjs <baseRef> <headRef>\n */\nimport { execFileSync } from 'node:child_process';\nimport * as fs from 'node:fs';\nimport * as path from 'node:path';\n\nconst [base, head] = process.argv.slice(2);\nif (!base || !head) { console.error('usage: canon-verify.mjs <base> <head>'); process.exit(2); }\n\nconst git = (a) => execFileSync('git', a, { encoding: 'utf8', maxBuffer: 256 * 1024 * 1024 });\n\nconst SECRET_PATTERNS = [\n  ['sk', /sk-[A-Za-z0-9_-]{16,}/],\n  ['ghp', /ghp_[A-Za-z0-9]{20,}/],\n  ['ghpat', /github_pat_[A-Za-z0-9_]{20,}/],\n  ['ghu', /ghu_[A-Za-z0-9]{20,}/],\n  ['ghs', /ghs_[A-Za-z0-9]{20,}/],\n  ['hf', /hf_[A-Za-z0-9]{20,}/],\n  ['aiza', /AIza[A-Za-z0-9_-]{20,}/],\n  ['xai', /xai-[A-Za-z0-9]{20,}/],\n  ['nar', /nar_[A-Za-z0-9]{16,}/],\n  ['gsk', /gsk_[A-Za-z0-9]{20,}/],\n  ['slack', /xox[bpars]-[A-Za-z0-9-]{10,}/],\n  ['akia', /AKIA[A-Z0-9]{16}/],\n  ['jwt', /eyJ[A-Za-z0-9_-]{20,}\\.eyJ[A-Za-z0-9_-]{20,}\\.[A-Za-z0-9_-]{10,}/],\n];\n\nconst changed = git(['diff', '--name-only', '--diff-filter=ACMR', base, head])\n  .split('\\n').map((s) => s.trim()).filter(Boolean);\n\nconst isJsonl = (f) => /\\.jsonl(\\.part-\\d{4})?$/.test(f);\nconst isCanonRecordFile = (f) => f.startsWith('canon/') && isJsonl(f) && !/\\.events\\.jsonl$/.test(f);\nconst isRef = (f) => f.endsWith('.ref');\n\nconst failures = [];\nconst fail = (file, msg) => {\n  failures.push(`${file} — ${msg}`);\n  console.log(`::error file=${file}::${msg}`);\n};\n\nlet checkedFiles = 0, checkedLines = 0;\nfor (const f of changed) {\n  if (!fs.existsSync(f)) continue; // renamed-away edge\n  const isText = isJsonl(f) || isRef(f) || f.endsWith('.md') || f.endsWith('.json');\n  if (!isText) continue;\n  const content = fs.readFileSync(f, 'utf8');\n  checkedFiles++;\n\n  // 3. secret scan (report pattern label only — NEVER echo the match)\n  for (const [label, re] of SECRET_PATTERNS) {\n    if (re.test(content)) fail(f, `secret-pattern hit (${label}) — content bypassed the sync scrub`);\n  }\n\n  // 1 + 2. JSONL parse + canon schema + tool-pairing invariants.\n  // Pairing (Phase B lesson — defects here surface as provider 400s at resume\n  // time): every tool_result must follow a seen tool_use (orphans are the\n  // translator's job to repair), and only TAIL tool_use may go unanswered\n  // (live session snapshotted mid-call). Pairing is skipped on .part-NNNN\n  // chunks — pairs legitimately span part boundaries.\n  if (isJsonl(f)) {\n    const schema = isCanonRecordFile(f);\n    const checkPairs = schema && !/\\.part-\\d{4}$/.test(f);\n    const uses = new Map(); // id -> line of tool_use\n    const answered = new Set();\n    const uuids = new Set();\n    let lastRecordLine = 0;\n    let n = 0;\n    for (const line of content.split('\\n')) {\n      n++;\n      if (!line.trim()) continue;\n      checkedLines++;\n      let rec;\n      try { rec = JSON.parse(line); }\n      catch { fail(f, `line ${n}: unparseable JSON`); continue; }\n      if (schema) {\n        for (const field of ['uuid', 'timestamp', 'type', 'provenance']) {\n          if (rec[field] === undefined) fail(f, `line ${n}: canon record missing '${field}'`);\n        }\n      }\n      if (checkPairs) {\n        lastRecordLine = n;\n        // Chain integrity: parentUuid must resolve within the canonical line\n        // (append-only ⇒ parents precede children). A dangling parent means a\n        // sidecarred/dropped record broke the chain — Claude Code's renderer\n        // silently EXCLUDES everything upstream of a break (a3.10 lesson: a\n        // 555KB doc vanished from rendered context).\n        if (rec.uuid) uuids.add(rec.uuid);\n        if (typeof rec.parentUuid === 'string' && !uuids.has(rec.parentUuid)) {\n          fail(f, `line ${n}: parentUuid ${rec.parentUuid} not found earlier in file — chain break (renderer will drop upstream context)`);\n        }\n        const blocks = Array.isArray(rec.message?.content) ? rec.message.content : [];\n        for (const b of blocks) {\n          if (b?.type === 'tool_use' && b.id) uses.set(b.id, n);\n          if (b?.type === 'tool_result' && b.tool_use_id) {\n            if (!uses.has(b.tool_use_id)) fail(f, `line ${n}: orphan tool_result (${b.tool_use_id}) — no prior tool_use; translator repair missing`);\n            answered.add(b.tool_use_id);\n          }\n        }\n      }\n    }\n    if (checkPairs) {\n      for (const [id, line] of uses) {\n        if (!answered.has(id) && lastRecordLine - line > 3) {\n          fail(f, `line ${line}: unanswered tool_use (${id}) mid-file — only tail in-flight calls may dangle`);\n        }\n      }\n    }\n  }\n\n  // 5. artifact-manifest schema (canon/artifacts/**.json — §27p second record kind)\n  if (/^canon\\/artifacts\\/.+\\.json$/.test(f) && !f.endsWith('ARTIFACTS.md')) {\n    try {\n      const rec = JSON.parse(content);\n      for (const field of ['recordKind', 'kind', 'id', 'version', 'timestamp', 'primary', 'content', 'provenance']) {\n        if (rec[field] === undefined) fail(f, `artifact manifest missing '${field}'`);\n      }\n      if (rec.recordKind !== 'artifact-manifest') fail(f, `recordKind must be 'artifact-manifest'`);\n      if (!Array.isArray(rec.content) || rec.content.some((c) => !c.path || !c.ref)) fail(f, 'content entries need path+ref');\n    } catch { fail(f, 'artifact manifest: unparseable JSON'); }\n  }\n\n  // 4. projection refs resolve\n  if (isRef(f)) {\n    const target = content.trim();\n    if (!target || target.includes('\\n')) fail(f, 'ref must be a single store-relative path');\n    else if (!fs.existsSync(target) && !fs.existsSync(`${target}.part-0000`)) {\n      fail(f, `ref target not found: ${target}`);\n    }\n  }\n}\n\nif (failures.length) {\n  console.log(`[FAIL] canon-verify: ${failures.length} problem(s) in ${checkedFiles} changed file(s)`);\n  process.exit(1);\n}\nconsole.log(`[OK] canon-verify: ${checkedFiles} changed file(s), ${checkedLines} record line(s), 0 problems`);\n";
 /** README.md — layout, CI, token-scoping, and privacy guidance. */
-export const STORE_README = "# Canon store\n\nYour agent memory, in a git repo you own. Scaffolded by `cortex canon init`.\n\nThis repository is a **canonical agent history & memory store** (canon): sessions,\nmemory, plans, and capability artifacts from any harness, stored once in a\nprovider-neutral format and translated per consumer at the edges. Spec:\n[docs/CANON.md](https://github.com/Spitfire-Products/nexus-cortex/blob/main/docs/CANON.md)\nin the nexus-cortex repository.\n\n## Layout\n\n| Path | Owner | Carries |\n|---|---|---|\n| `/native/<harness>/` | agents | each harness's own session dialect, verbatim (the only path an agent writes) |\n| `/canon/` | tooling | the canonical line — translated, append-only, provenance-anchored |\n| `/projections/<harness>/` | tooling | canon fanned back out into each harness's dialect |\n| `/memory/` | agents | distilled memory files (index + detail) |\n| `/plans/`, `/projects/` | agents | plan docs + task state, project manifests — the intent layer |\n| `/skills/`, `/agents/`, `/mcp/`, `/plugins/` | agents | capability artifacts (harness-contract layer) |\n\n`*.jsonl` files use `merge=union` (see `.gitattributes`) so append-only concurrent\nappends auto-merge.\n\n## CI\n\n`.github/workflows/canon-verify.yml` lints changed files on every push/PR:\nJSONL integrity, canon record schema, tool-pairing/chain invariants, secret-pattern\nscan, projection-ref resolution. It never writes to the repo. Failures are grouped\nand fatal — never silent.\n\n## Access tokens\n\nPrefer a **fine-grained personal access token scoped to this single repository**\n(Contents: read/write). Never a classic all-repo token. If a workflow file itself\nmust be pushed, the pushing credential needs the `workflow` scope — grant it\ntemporarily, then revoke.\n\n## Privacy\n\nThis store may contain your working history. Keep the repository **private** by\ndefault. Scrub secrets before push (the CI secret scan is a tripwire, not the\nscrubber). `git clone --mirror` exits with your full history at any time — no\ntool or vendor holds it hostage.\n";
+export const STORE_README = "# Canon store\n\nYour agent memory, in a git repo you own. Scaffolded by `cortex canon init`.\n\nThis repository is a **canonical agent history & memory store** (canon): sessions,\nmemory, plans, and capability artifacts from any harness, stored once in a\nprovider-neutral format and translated per consumer at the edges. Spec:\n[docs/CANON.md](https://github.com/Spitfire-Products/nexus-cortex/blob/main/docs/CANON.md)\nin the nexus-cortex repository.\n\n## Layout\n\n| Path | Owner | Carries |\n|---|---|---|\n| `/native/<harness>/` | agents | each harness's own session dialect, verbatim (the only path an agent writes) |\n| `/canon/` | tooling | the canonical line \u2014 translated, append-only, provenance-anchored |\n| `/projections/<harness>/` | tooling | canon fanned back out into each harness's dialect |\n| `/memory/` | agents | distilled memory files (index + detail) |\n| `/plans/`, `/projects/` | agents | plan docs + task state, project manifests \u2014 the intent layer |\n| `/skills/`, `/agents/`, `/mcp/`, `/plugins/` | agents | capability artifacts (harness-contract layer) |\n\n`*.jsonl` files use `merge=union` (see `.gitattributes`) so append-only concurrent\nappends auto-merge.\n\n## CI\n\n`.github/workflows/canon-verify.yml` lints changed files on every push/PR:\nJSONL integrity, canon record schema, tool-pairing/chain invariants, secret-pattern\nscan, projection-ref resolution. It never writes to the repo. Failures are grouped\nand fatal \u2014 never silent.\n\n\n## Configuration (the levers)\n\n| File | Controls |\n|---|---|\n| `HARNESSES.json` (store root) | Which harnesses `canon sync` captures: `{ \"harnesses\": { \"<label>\": { \"exts\": [\".jsonl\"], \"roots\": [\"~/.tool/sessions\"] } } }` \u2014 adding a harness is config, not code |\n| `projects/ROOTS.json` | Project-map overrides for `canon list --project` / `canon graph`: `roots` (id \u2192 absolute path), `claudeDirs`, `cortexLabels`. Derivation from `$HOME` + the filesystem covers common cases; override dash-ambiguous paths, other machines' sessions, or sub-root labels |\n\n## Derived artifacts (regenerable, never source of truth)\n\n- `/projects/<id>.json` \u2014 derived project \u2194 session map\n- `/projects/<id>/graph.json` \u2014 project knowledge graph (NetworkX node-link;\n  history half = sessions/artifacts/touched edges; code half auto-folded from\n  `<project-root>/graphify-out/graph.json` when present; every edge\n  confidence-tagged). Rebuild anytime: `cortex canon graph` / `nexus-canon graph`\n- `/canon/artifacts/` \u2014 ArtifactManifest records for skills/agents/mcp/plugins/plans/projects\n\nFull CLI reference: `cortex canon --help` (or `nexus-canon` standalone) and the\nCANON.md spec + HARNESS_ONBOARDING.md protocol in the nexus-cortex repository.\n\n## Access tokens\n\nPrefer a **fine-grained personal access token scoped to this single repository**\n(Contents: read/write). Never a classic all-repo token. If a workflow file itself\nmust be pushed, the pushing credential needs the `workflow` scope \u2014 grant it\ntemporarily, then revoke.\n\n## Privacy\n\nThis store may contain your working history. Keep the repository **private** by\ndefault. Scrub secrets before push (the CI secret scan is a tripwire, not the\nscrubber). `git clone --mirror` exits with your full history at any time \u2014 no\ntool or vendor holds it hostage.\n";
 /** Directory taxonomy: session dimension + intent layer + artifact dimension. */
 export const STORE_DIRS = [
     'native',

package/dist/scaffoldAssets.js.map

@@ -1 +1 @@
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+{"version":3,"file":"scaffoldAssets.js","sourceRoot":"","sources":["../src/scaffoldAssets.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,wEAAwE;AACxE,MAAM,CAAC,MAAM,aAAa,GAAG,uBAAuB,CAAC;AAErD,6EAA6E;AAC7E,MAAM,CAAC,MAAM,UAAU,GAAG,+xEAA+xE,CAAC;AAE1zE,4EAA4E;AAC5E,MAAM,CAAC,MAAM,gBAAgB,GAAG,kyNAAkyN,CAAC;AAEn0N,mEAAmE;AACnE,MAAM,CAAC,MAAM,YAAY,GAAG,ozGAAozG,CAAC;AAEj1G,iFAAiF;AACjF,MAAM,CAAC,MAAM,UAAU,GAAG;IACxB,QAAQ;IACR,OAAO;IACP,aAAa;IACb,QAAQ;IACR,OAAO;IACP,UAAU;IACV,QAAQ;IACR,QAAQ;IACR,KAAK;IACL,SAAS;CACD,CAAC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "nexus-canon",
-  "version": "1.1.0",
+  "version": "1.2.0",
   "description": "Portable agent memory in a git repo you own — the canonical agent history & memory store (canon): sync, translate, pull, capability artifacts, and project knowledge graphs across AI coding harnesses.",
   "type": "module",
   "main": "./dist/index.js",
@@ -19,7 +19,7 @@
     "test": "vitest run --passWithNoTests"
   },
   "dependencies": {
-    "@nexus-cortex/types": "^4.55.0"
+    "@nexus-cortex/types": "^4.55.1"
   },
   "files": [
     "dist",