nexus-agents 3.5.0 → 3.5.2

package/dist/{chunk-NWTACWXE.js → chunk-66QB5SML.js}

@@ -8,7 +8,7 @@ import {
   checkSqlite,
   defaultConfig,
   initDataDirectories
-} from "./chunk-3EIACKNR.js";
+} from "./chunk-J2FUCIPH.js";
 import {
   BUILT_IN_EXPERTS
 } from "./chunk-YPNQPT2F.js";
@@ -2001,4 +2001,4 @@ export {
   setupCommand,
   setupCommandAsync
 };
-//# sourceMappingURL=chunk-NWTACWXE.js.map
+//# sourceMappingURL=chunk-66QB5SML.js.map

package/dist/{chunk-YF35FKKD.js → chunk-BQTMMLQQ.js}

@@ -6,6 +6,7 @@ import { resolve, extname as extname2, relative } from "path";
 import { readFile } from "fs/promises";
 import { extname } from "path";
 import ts from "typescript";
+var SUPPORTED_EXTENSIONS = [".ts", ".tsx", ".js", ".jsx"];
 function getKind(node) {
   if (ts.isFunctionDeclaration(node)) return "function";
   if (ts.isClassDeclaration(node)) return "class";
@@ -86,14 +87,15 @@ function computeSavings(totalChars, symbolChars) {
 }
 async function extractSymbols(filePath) {
   const ext = extname(filePath).toLowerCase();
-  if (![".ts", ".tsx", ".js", ".jsx"].includes(ext)) {
+  if (!SUPPORTED_EXTENSIONS.includes(ext)) {
     return {
       filePath,
       symbols: [],
       totalLines: 0,
       totalChars: 0,
       symbolChars: 0,
-      savingsPercent: 0
+      savingsPercent: 0,
+      parsed: false
     };
   }
   const source = await readFile(filePath, "utf-8");
@@ -110,12 +112,17 @@ async function extractSymbols(filePath) {
     totalLines: source.split("\n").length,
     totalChars,
     symbolChars,
-    savingsPercent: computeSavings(totalChars, symbolChars)
+    savingsPercent: computeSavings(totalChars, symbolChars),
+    parsed: true
   };
 }
-async function extractSymbolIndex(filePath) {
+async function extractSymbolIndexResult(filePath) {
   const result = await extractSymbols(filePath);
-  if (result.symbols.length === 0) return "";
+  if (!result.parsed) return { kind: "empty", reason: "unsupported" };
+  if (result.symbols.length === 0) return { kind: "empty", reason: "no-declarations" };
+  return { kind: "index", index: renderIndex(filePath, result) };
+}
+function renderIndex(filePath, result) {
   const lines = result.symbols.map((s) => {
     const exp = s.exported ? "export " : "";
     return `${exp}${s.kind} ${s.name} (L${String(s.startLine)}-${String(s.endLine)})`;
@@ -257,11 +264,12 @@ var CodebaseIndex = class {
 };
 
 export {
+  SUPPORTED_EXTENSIONS,
   extractSymbols,
-  extractSymbolIndex,
+  extractSymbolIndexResult,
   DEFAULT_INDEX_MAX_DEPTH,
   MAX_INDEX_MAX_DEPTH,
   findSourceFiles,
   CodebaseIndex
 };
-//# sourceMappingURL=chunk-YF35FKKD.js.map
+//# sourceMappingURL=chunk-BQTMMLQQ.js.map

package/dist/chunk-BQTMMLQQ.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/indexer/codebase-search.ts","../src/indexer/symbol-extractor.ts"],"sourcesContent":["/**\n * Codebase search — keyword search across symbol indices.\n *\n * Builds an in-memory symbol index for a directory of TS/JS files,\n * then supports keyword search, file summaries, and symbol lookup.\n *\n * Inspired by Augment Code's Context Engine. Uses the existing\n * extractSymbols() function for AST parsing.\n *\n * @module indexer/codebase-search\n */\n\nimport { readdir } from 'node:fs/promises';\nimport { resolve, extname, relative } from 'node:path';\nimport {\n  extractSymbols,\n  type CodeSymbol,\n  type SymbolExtractionResult,\n} from './symbol-extractor.js';\n\n/** A symbol with its source file path. */\nexport interface IndexedSymbol extends CodeSymbol {\n  /** Relative file path from the indexed root. */\n  filePath: string;\n}\n\n/** Search result with relevance scoring. */\nexport interface SearchResult {\n  symbol: IndexedSymbol;\n  /** Relevance score (higher = better match). */\n  score: number;\n  /** How the query matched (exact, prefix, substring, word). */\n  matchType: 'exact' | 'prefix' | 'substring' | 'word';\n}\n\n/** File summary — compact overview of a source file. */\nexport interface FileSummary {\n  filePath: string;\n  totalLines: number;\n  exportedSymbols: number;\n  privateSymbols: number;\n  kinds: Record<string, number>;\n}\n\n/** Index statistics. */\nexport interface IndexStats {\n  totalFiles: number;\n  totalSymbols: number;\n  indexedAt: string;\n  /** Directories not descended into because `maxDepth` was exhausted (#4243). */\n  skippedDirs: number;\n}\n\n/** Default recursion depth for `CodebaseIndex.index()` (#4243 — was hardcoded 4). */\nexport const DEFAULT_INDEX_MAX_DEPTH = 24;\n/** Upper clamp for caller-supplied `maxDepth` to bound worst-case tree-walk cost. */\nexport const MAX_INDEX_MAX_DEPTH = 64;\n\n// Score weights for different match types\nconst SCORE_EXACT = 20;\nconst SCORE_PREFIX = 10;\nconst SCORE_WORD = 5;\nconst SCORE_SUBSTRING = 2;\nconst SCORE_EXPORTED_BONUS = 3;\n\nfunction isSourceFile(name: string): boolean {\n  const ext = extname(name).toLowerCase();\n  return (\n    ['.ts', '.tsx', '.js', '.jsx'].includes(ext) &&\n    !name.endsWith('.test.ts') &&\n    !name.endsWith('.test.tsx') &&\n    !name.endsWith('.d.ts')\n  );\n}\n\n/** Result of a recursive source-file walk: the files found plus a truncation signal. */\nexport interface FindSourceFilesResult {\n  files: string[];\n  /** Count of directories that were NOT descended into because maxDepth hit 0. */\n  skippedDirs: number;\n}\n\n/**\n * Recursively collect TS/JS source files under `dir`, bounded by `maxDepth`,\n * skipping `node_modules`/`dist` and test/declaration files. Exported so the\n * `search_usages` tool (#4265) reuses the exact same source-file set the symbol\n * index walks — keeping the two tools' scopes apples-to-apples (DRY).\n */\nexport async function findSourceFiles(\n  dir: string,\n  maxDepth: number\n): Promise<FindSourceFilesResult> {\n  if (maxDepth <= 0) return { files: [], skippedDirs: 1 };\n  const files: string[] = [];\n  let skippedDirs = 0;\n  const entries = await readdir(dir, { withFileTypes: true }).catch(() => []);\n  for (const entry of entries) {\n    const fullPath = resolve(dir, entry.name);\n    if (entry.isDirectory() && entry.name !== 'node_modules' && entry.name !== 'dist') {\n      const sub = await findSourceFiles(fullPath, maxDepth - 1);\n      files.push(...sub.files);\n      skippedDirs += sub.skippedDirs;\n    }\n    if (entry.isFile() && isSourceFile(entry.name)) {\n      files.push(fullPath);\n    }\n  }\n  return { files, skippedDirs };\n}\n\nfunction scoreMatch(symbolName: string, query: string): SearchResult['score'] | null {\n  const nameLower = symbolName.toLowerCase();\n  const queryLower = query.toLowerCase();\n\n  if (nameLower === queryLower) return SCORE_EXACT;\n  if (nameLower.startsWith(queryLower)) return SCORE_PREFIX;\n\n  // Word boundary match (camelCase splitting)\n  const words = symbolName\n    .replace(/([a-z])([A-Z])/g, '$1 $2')\n    .toLowerCase()\n    .split(/[\\s_-]+/);\n  if (words.some((w) => w === queryLower)) return SCORE_WORD;\n\n  if (nameLower.includes(queryLower)) return SCORE_SUBSTRING;\n\n  return null;\n}\n\nfunction getMatchType(score: number): SearchResult['matchType'] {\n  if (score >= SCORE_EXACT) return 'exact';\n  if (score >= SCORE_PREFIX) return 'prefix';\n  if (score >= SCORE_WORD) return 'word';\n  return 'substring';\n}\n\n/** In-memory codebase symbol index. */\nexport class CodebaseIndex {\n  private readonly symbols: IndexedSymbol[] = [];\n  private readonly fileResults = new Map<string, SymbolExtractionResult>();\n  private readonly rootDir: string;\n  private skippedDirs = 0;\n\n  constructor(rootDir: string) {\n    this.rootDir = rootDir;\n  }\n\n  /**\n   * Index all TS/JS source files in the directory.\n   *\n   * `maxDepth` is clamped to `[1, MAX_INDEX_MAX_DEPTH]` so a caller-supplied\n   * value can't force an unbounded tree-walk (#4243).\n   */\n  async index(maxDepth: number = DEFAULT_INDEX_MAX_DEPTH): Promise<IndexStats> {\n    const clampedDepth = Math.min(Math.max(maxDepth, 1), MAX_INDEX_MAX_DEPTH);\n    const { files, skippedDirs } = await findSourceFiles(this.rootDir, clampedDepth);\n    this.skippedDirs = skippedDirs;\n\n    for (const file of files) {\n      const result = await extractSymbols(file);\n      const relPath = relative(this.rootDir, file);\n      this.fileResults.set(relPath, result);\n\n      for (const symbol of result.symbols) {\n        this.symbols.push({ ...symbol, filePath: relPath });\n      }\n    }\n\n    return {\n      totalFiles: files.length,\n      totalSymbols: this.symbols.length,\n      indexedAt: new Date().toISOString(),\n      skippedDirs,\n    };\n  }\n\n  /** Search symbols by keyword. Returns top N results sorted by relevance. */\n  search(query: string, limit = 20): SearchResult[] {\n    const results: SearchResult[] = [];\n\n    for (const symbol of this.symbols) {\n      const baseScore = scoreMatch(symbol.name, query);\n      if (baseScore === null) continue;\n\n      const bonus = symbol.exported ? SCORE_EXPORTED_BONUS : 0;\n      results.push({\n        symbol,\n        score: baseScore + bonus,\n        matchType: getMatchType(baseScore),\n      });\n    }\n\n    return results.sort((a, b) => b.score - a.score).slice(0, limit);\n  }\n\n  /** Get a compact summary of a file's symbols. */\n  getFileSummary(filePath: string): FileSummary | undefined {\n    const result = this.fileResults.get(filePath);\n    if (result === undefined) return undefined;\n\n    const kinds: Record<string, number> = {};\n    let exported = 0;\n    let priv = 0;\n\n    for (const s of result.symbols) {\n      kinds[s.kind] = (kinds[s.kind] ?? 0) + 1;\n      if (s.exported) exported++;\n      else priv++;\n    }\n\n    return {\n      filePath,\n      totalLines: result.totalLines,\n      exportedSymbols: exported,\n      privateSymbols: priv,\n      kinds,\n    };\n  }\n\n  /** List all indexed files with symbol counts. */\n  listFiles(): Array<{ path: string; symbols: number; lines: number }> {\n    return [...this.fileResults.entries()].map(([path, result]) => ({\n      path,\n      symbols: result.symbols.length,\n      lines: result.totalLines,\n    }));\n  }\n\n  /** Get index statistics. */\n  get stats(): { files: number; symbols: number; skippedDirs: number } {\n    return {\n      files: this.fileResults.size,\n      symbols: this.symbols.length,\n      skippedDirs: this.skippedDirs,\n    };\n  }\n}\n","/**\n * AST symbol extraction for token-efficient code retrieval.\n *\n * Uses TypeScript's compiler API to extract function, class, method,\n * interface, and type definitions from source files.\n *\n * Token savings: ~80-99% vs reading full files.\n * No additional dependencies — uses TypeScript (already a project dep).\n *\n * @module indexer/symbol-extractor\n */\n\nimport { readFile } from 'node:fs/promises';\nimport { extname } from 'node:path';\nimport ts from 'typescript';\n\n/** A symbol extracted from source code. */\nexport interface CodeSymbol {\n  /** Symbol name */\n  name: string;\n  /** Symbol kind */\n  kind: 'function' | 'class' | 'method' | 'interface' | 'type' | 'variable' | 'enum';\n  /** Start line (1-based) */\n  startLine: number;\n  /** End line (1-based) */\n  endLine: number;\n  /** Full source text of the symbol */\n  text: string;\n  /** Whether the symbol is exported */\n  exported: boolean;\n}\n\n/**\n * Extensions the TypeScript compiler API path can parse (#4517).\n *\n * Exported so the tool layer can name them in its error message instead of\n * asserting a file \"may not be TypeScript/JavaScript\" without saying what\n * would count.\n */\nexport const SUPPORTED_EXTENSIONS: readonly string[] = ['.ts', '.tsx', '.js', '.jsx'];\n\n/** Result of extracting symbols from a file. */\nexport interface SymbolExtractionResult {\n  filePath: string;\n  symbols: CodeSymbol[];\n  totalLines: number;\n  totalChars: number;\n  symbolChars: number;\n  savingsPercent: number;\n  /**\n   * Whether the file was actually parsed (#4517).\n   *\n   * `false` means the extension is not supported, so `symbols: []` reports\n   * that nothing was READ — not that nothing is there. An unsupported file and\n   * a genuinely symbol-free file previously returned identical results, and\n   * the tool guessed between them wrongly: a valid TypeScript barrel of 20\n   * re-exports was reported as possibly-not-TypeScript.\n   */\n  parsed: boolean;\n}\n\nfunction getKind(node: ts.Node): CodeSymbol['kind'] | null {\n  if (ts.isFunctionDeclaration(node)) return 'function';\n  if (ts.isClassDeclaration(node)) return 'class';\n  if (ts.isInterfaceDeclaration(node)) return 'interface';\n  if (ts.isTypeAliasDeclaration(node)) return 'type';\n  if (ts.isEnumDeclaration(node)) return 'enum';\n  if (ts.isMethodDeclaration(node)) return 'method';\n  if (ts.isVariableStatement(node)) return 'variable';\n  return null;\n}\n\nfunction getName(node: ts.Node): string {\n  if (\n    ts.isFunctionDeclaration(node) ||\n    ts.isClassDeclaration(node) ||\n    ts.isInterfaceDeclaration(node) ||\n    ts.isTypeAliasDeclaration(node) ||\n    ts.isEnumDeclaration(node) ||\n    ts.isMethodDeclaration(node)\n  ) {\n    const nameNode = (node as ts.NamedDeclaration).name;\n    return nameNode ? nameNode.getText() : '<anonymous>';\n  }\n  if (ts.isVariableStatement(node)) {\n    const decls = node.declarationList.declarations;\n    const firstDecl = decls[0];\n    if (firstDecl !== undefined) {\n      return firstDecl.name.getText();\n    }\n  }\n  return '<anonymous>';\n}\n\nfunction isExported(node: ts.Node): boolean {\n  const modifiers = ts.canHaveModifiers(node) ? ts.getModifiers(node) : undefined;\n  if (modifiers) {\n    return modifiers.some((m) => m.kind === ts.SyntaxKind.ExportKeyword);\n  }\n  return false;\n}\n\nfunction visitNode(node: ts.Node, sourceFile: ts.SourceFile, symbols: CodeSymbol[]): void {\n  const kind = getKind(node);\n  if (kind !== null) {\n    const name = getName(node);\n    if (name !== '<anonymous>') {\n      const start = sourceFile.getLineAndCharacterOfPosition(node.getStart());\n      const end = sourceFile.getLineAndCharacterOfPosition(node.getEnd());\n      symbols.push({\n        name,\n        kind,\n        startLine: start.line + 1,\n        endLine: end.line + 1,\n        text: node.getText(sourceFile),\n        exported: isExported(node),\n      });\n    }\n  }\n  if (ts.isClassDeclaration(node)) {\n    visitClassMembers(node, sourceFile, symbols);\n    return;\n  }\n  ts.forEachChild(node, (child) => {\n    visitNode(child, sourceFile, symbols);\n  });\n}\n\nfunction visitClassMembers(\n  node: ts.ClassDeclaration,\n  sourceFile: ts.SourceFile,\n  symbols: CodeSymbol[]\n): void {\n  for (const member of node.members) {\n    if (ts.isMethodDeclaration(member) || ts.isPropertyDeclaration(member)) {\n      const memberName = member.name.getText();\n      if (memberName !== '<anonymous>') {\n        const start = sourceFile.getLineAndCharacterOfPosition(member.getStart());\n        const end = sourceFile.getLineAndCharacterOfPosition(member.getEnd());\n        symbols.push({\n          name: memberName,\n          kind: 'method',\n          startLine: start.line + 1,\n          endLine: end.line + 1,\n          text: member.getText(sourceFile),\n          exported: false,\n        });\n      }\n    }\n  }\n}\n\nfunction computeSavings(totalChars: number, symbolChars: number): number {\n  return totalChars > 0 ? Math.round(100 * (1 - symbolChars / totalChars) * 10) / 10 : 0;\n}\n\n/**\n * Extract symbols from a TypeScript/JavaScript file.\n */\nexport async function extractSymbols(filePath: string): Promise<SymbolExtractionResult> {\n  const ext = extname(filePath).toLowerCase();\n  if (!SUPPORTED_EXTENSIONS.includes(ext)) {\n    return {\n      filePath,\n      symbols: [],\n      totalLines: 0,\n      totalChars: 0,\n      symbolChars: 0,\n      savingsPercent: 0,\n      parsed: false,\n    };\n  }\n\n  const source = await readFile(filePath, 'utf-8');\n  const sourceFile = ts.createSourceFile(filePath, source, ts.ScriptTarget.Latest, true);\n  const symbols: CodeSymbol[] = [];\n\n  ts.forEachChild(sourceFile, (node) => {\n    visitNode(node, sourceFile, symbols);\n  });\n\n  const totalChars = source.length;\n  const symbolChars = symbols.reduce((sum, s) => sum + s.text.length, 0);\n\n  return {\n    filePath,\n    symbols,\n    totalLines: source.split('\\n').length,\n    totalChars,\n    symbolChars,\n    savingsPercent: computeSavings(totalChars, symbolChars),\n    parsed: true,\n  };\n}\n\n/**\n * Why {@link extractSymbolIndex} produced no index (#4517).\n *\n * `unsupported` and `no-declarations` are different facts about the world:\n * the first says the file was never read, the second says it was read and\n * genuinely declares nothing locally — a re-export barrel, typically. Callers\n * that collapse them tell the user to check a file type that was never the\n * problem.\n */\nexport type EmptyIndexReason = 'unsupported' | 'no-declarations';\n\n/** A symbol index, or the reason there is none. */\nexport type SymbolIndexResult =\n  | { readonly kind: 'index'; readonly index: string }\n  | { readonly kind: 'empty'; readonly reason: EmptyIndexReason };\n\n/**\n * Extract a compact symbol index, reporting why when there is nothing to show.\n *\n * Names + locations only, no source text — the minimal representation for LLM\n * context (~95%+ token savings). Replaced the earlier `extractSymbolIndex`,\n * which returned a bare `''` for both \"could not read\" and \"read, found\n * nothing\" and so could not tell a caller which had happened.\n */\nexport async function extractSymbolIndexResult(filePath: string): Promise<SymbolIndexResult> {\n  const result = await extractSymbols(filePath);\n  if (!result.parsed) return { kind: 'empty', reason: 'unsupported' };\n  if (result.symbols.length === 0) return { kind: 'empty', reason: 'no-declarations' };\n  return { kind: 'index', index: renderIndex(filePath, result) };\n}\n\nfunction renderIndex(filePath: string, result: SymbolExtractionResult): string {\n  const lines = result.symbols.map((s) => {\n    const exp = s.exported ? 'export ' : '';\n    return `${exp}${s.kind} ${s.name} (L${String(s.startLine)}-${String(s.endLine)})`;\n  });\n  return `// ${filePath} — ${String(result.symbols.length)} 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package/dist/{chunk-3EIACKNR.js → chunk-J2FUCIPH.js}

@@ -49,7 +49,7 @@ import {
 } from "./chunk-OQLFRJCW.js";
 
 // src/version.ts
-var VERSION = true ? "3.5.0" : "dev";
+var VERSION = true ? "3.5.2" : "dev";
 
 // src/config/schemas-core.ts
 import { z } from "zod";
@@ -2287,7 +2287,7 @@ async function runDoctorFix(result) {
   writeLine2("\u2500".repeat(40));
   let fixCount = 0;
   if (!result.dataDirectory.rootExists || result.dataDirectory.subdirectories.some((d) => !d.exists || !d.writable)) {
-    const { runSetup } = await import("./setup-command-ISVGN73J.js");
+    const { runSetup } = await import("./setup-command-DOPNW32N.js");
     const setupResult = runSetup({
       skipMcp: true,
       skipRules: true,
@@ -2400,4 +2400,4 @@ export {
   startStdioServer,
   closeServer
 };
-//# sourceMappingURL=chunk-3EIACKNR.js.map
+//# sourceMappingURL=chunk-J2FUCIPH.js.map

package/dist/{chunk-DDY7JDTZ.js → chunk-W7532ZQG.js}

@@ -8,10 +8,11 @@ import {
   CodebaseIndex,
   DEFAULT_INDEX_MAX_DEPTH,
   MAX_INDEX_MAX_DEPTH,
-  extractSymbolIndex,
+  SUPPORTED_EXTENSIONS,
+  extractSymbolIndexResult,
   extractSymbols,
   findSourceFiles
-} from "./chunk-YF35FKKD.js";
+} from "./chunk-BQTMMLQQ.js";
 import {
   FINDING_SEVERITY_LEVELS,
   SARIF_LEVEL_MAP,
@@ -21,7 +22,7 @@ import {
   DEFAULT_TASK_TTL_MS,
   DEFAULT_TOOL_RATE_LIMITS,
   clampTaskTtl
-} from "./chunk-3EIACKNR.js";
+} from "./chunk-J2FUCIPH.js";
 import {
   executeExpert
 } from "./chunk-GVLDWGSK.js";
@@ -20780,7 +20781,7 @@ import * as fs2 from "fs/promises";
 import * as path2 from "path";
 import * as yaml from "yaml";
 var MAX_FILE_SIZE_BYTES = 1024 * 1024;
-var SUPPORTED_EXTENSIONS = [".yaml", ".yml", ".json"];
+var SUPPORTED_EXTENSIONS2 = [".yaml", ".yml", ".json"];
 function validatePath(userPath, allowedRoot) {
   const resolved = resolveInsideRoot(userPath, allowedRoot);
   if (resolved === null) {
@@ -20912,10 +20913,10 @@ async function loadWorkflowFile(filePath, allowedRoot = process.cwd()) {
   }
   const validatedPath = pathValidation.value;
   const ext = path2.extname(validatedPath).toLowerCase();
-  if (!SUPPORTED_EXTENSIONS.includes(ext)) {
+  if (!SUPPORTED_EXTENSIONS2.includes(ext)) {
     return err(
       new ParseError(
-        `Unsupported file extension: ${ext}. Supported: ${SUPPORTED_EXTENSIONS.join(", ")}`
+        `Unsupported file extension: ${ext}. Supported: ${SUPPORTED_EXTENSIONS2.join(", ")}`
       )
     );
   }
@@ -41741,7 +41742,7 @@ function registerSearchCodebaseTool(server, deps) {
 }
 
 // src/mcp/tools/extract-symbols-tool.ts
-import { resolve as resolve8, sep as sep4 } from "path";
+import { extname as extname3, resolve as resolve8, sep as sep4 } from "path";
 import { z as z81 } from "zod";
 var DEFAULT_EXTRACT_MAX_CHARS = 2e4;
 var DEFAULT_EXTRACT_MAX_SYMBOLS = 200;
@@ -41857,11 +41858,11 @@ async function extractSymbolsHandler(args, ctx) {
       );
       return toolSuccess(output2);
     }
-    const index = await extractSymbolIndex(resolvedPath);
-    if (index === "") {
-      return toolSuccess("No symbols found (file may not be TypeScript/JavaScript)");
+    const result = await extractSymbolIndexResult(resolvedPath);
+    if (result.kind === "empty") {
+      return toolSuccess(emptyIndexMessage(result.reason, resolvedPath));
     }
-    return toolSuccess(index);
+    return toolSuccess(result.index);
   } catch (caught) {
     const e = caught instanceof Error ? caught : new Error(String(caught));
     ctx.logger.error("Symbol extraction failed", e);
@@ -41871,6 +41872,14 @@ async function extractSymbolsHandler(args, ctx) {
     });
   }
 }
+function emptyIndexMessage(reason, filePath) {
+  if (reason === "unsupported") {
+    const ext = extname3(filePath).toLowerCase();
+    const shown = ext === "" ? "(no extension)" : ext;
+    return `Not parsed: extract_symbols cannot read ${shown} files. Supported: ${SUPPORTED_EXTENSIONS.join(", ")}. This says nothing about whether the file contains symbols.`;
+  }
+  return "Parsed successfully; no local declarations found. A re-export barrel (`export { X } from ...`) reports zero symbols because re-exports declare nothing locally.";
+}
 function registerExtractSymbolsTool(server, deps) {
   const logger58 = deps.logger ?? createLogger({ tool: "extract_symbols" });
   const toolSchema = {
@@ -45335,6 +45344,68 @@ function buildScanSummary(total, confirmed, falsePositives, osvCount) {
   return parts.join(", ");
 }
 
+// src/security/quality-gate-commands.ts
+import { existsSync as existsSync9, readFileSync as readFileSync7 } from "fs";
+import { join as join9 } from "path";
+var LOCKFILES = [
+  { file: "pnpm-lock.yaml", manager: "pnpm" },
+  { file: "yarn.lock", manager: "yarn" },
+  { file: "bun.lockb", manager: "bun" },
+  { file: "package-lock.json", manager: "npm" }
+];
+var SCRIPT_CANDIDATES = {
+  lint: ["lint"],
+  typecheck: ["typecheck", "type-check", "types"],
+  tests: ["test", "tests"],
+  build: ["build"]
+};
+function detectPackageManager(projectDir) {
+  for (const { file, manager } of LOCKFILES) {
+    if (existsSync9(join9(projectDir, file))) return manager;
+  }
+  return "npm";
+}
+function readScripts(projectDir) {
+  const manifest = join9(projectDir, "package.json");
+  if (!existsSync9(manifest)) return void 0;
+  try {
+    const parsed = JSON.parse(readFileSync7(manifest, "utf-8"));
+    if (typeof parsed !== "object" || parsed === null) return void 0;
+    const scripts = parsed.scripts;
+    if (typeof scripts !== "object" || scripts === null) return void 0;
+    const out = {};
+    for (const [name, body] of Object.entries(scripts)) {
+      if (typeof body === "string") out[name] = body;
+    }
+    return out;
+  } catch {
+    return void 0;
+  }
+}
+function resolveCheckCommand(projectDir, check) {
+  const scripts = readScripts(projectDir);
+  if (scripts === void 0) {
+    return {
+      kind: "unconfigured",
+      reason: `no readable package.json in ${projectDir}, so the "${check}" script could not be resolved`
+    };
+  }
+  const candidates = SCRIPT_CANDIDATES[check];
+  const found = candidates.find((name) => (scripts[name] ?? "").trim() !== "");
+  if (found === void 0) {
+    return {
+      kind: "unconfigured",
+      reason: `no "${check}" script declared (looked for: ${candidates.join(", ")})`
+    };
+  }
+  return {
+    kind: "command",
+    command: detectPackageManager(projectDir),
+    args: ["run", "--silent", found],
+    script: found
+  };
+}
+
 // src/security/quality-gate.ts
 async function runCommandCheck(name, command, args, cwd) {
   const start = Date.now();
@@ -45359,17 +45430,31 @@ async function runCommandCheck(name, command, args, cwd) {
     };
   }
 }
+function scriptedCheck(name, check, projectDir) {
+  return async () => {
+    const resolved = resolveCheckCommand(projectDir, check);
+    if (resolved.kind === "unconfigured") {
+      return {
+        name,
+        verdict: "skip",
+        details: `Not run: ${resolved.reason}. Declare the script to enable this check.`,
+        durationMs: 0
+      };
+    }
+    return runCommandCheck(name, resolved.command, resolved.args, projectDir);
+  };
+}
 function checkTypeCheck(projectDir) {
-  return () => runCommandCheck("type_check", "npx", ["tsc", "--noEmit", "--project", projectDir], projectDir);
+  return scriptedCheck("type_check", "typecheck", projectDir);
 }
 function checkLint(projectDir) {
-  return () => runCommandCheck("lint", "npx", ["eslint", "--max-warnings", "0", projectDir], projectDir);
+  return scriptedCheck("lint", "lint", projectDir);
 }
 function checkTests(projectDir) {
-  return () => runCommandCheck("tests", "npx", ["vitest", "run", "--dir", projectDir], projectDir);
+  return scriptedCheck("tests", "tests", projectDir);
 }
 function checkBuild(projectDir) {
-  return () => runCommandCheck("build", "pnpm", ["build"], projectDir);
+  return scriptedCheck("build", "build", projectDir);
 }
 function aggregateResults2(checks) {
   let pass = 0;
@@ -45380,14 +45465,23 @@ function aggregateResults2(checks) {
     else if (c.verdict === "fail") fail++;
     else skip2++;
   }
-  return { verdict: fail > 0 ? "fail" : "pass", summary: { pass, fail, skip: skip2 } };
+  const verdict = fail > 0 ? "fail" : pass === 0 && skip2 > 0 ? "skip" : "pass";
+  return { verdict, summary: { pass, fail, skip: skip2 } };
 }
 function generateFeedback2(checks) {
   const failures = checks.filter((c) => c.verdict === "fail");
-  if (failures.length === 0) return "All checks passed.";
+  const skipped = checks.filter((c) => c.verdict === "skip");
+  const skipNote = skipped.length > 0 ? `
+${String(skipped.length)} check(s) did not run:
+${skipped.map((s) => `- ${s.name}: ${s.details}`).join("\n")}` : "";
+  if (failures.length === 0) {
+    const ran = checks.length - skipped.length;
+    const headline = ran === 0 ? "No checks ran." : `All ${String(ran)} check(s) that ran passed.`;
+    return `${headline}${skipNote}`;
+  }
   const lines = failures.map((f) => `- ${f.name}: ${f.details}`);
   return `${String(failures.length)} check(s) failed:
-${lines.join("\n")}`;
+${lines.join("\n")}${skipNote}`;
 }
 async function runQualityGate(stage, checks, iteration = 1) {
   const results = [];
@@ -46210,7 +46304,7 @@ function createScaffoldStageWrapper() {
 }
 async function searchCodebaseForTask(task) {
   try {
-    const { CodebaseIndex: CodebaseIndex2 } = await import("./codebase-search-LUF5YJLQ.js");
+    const { CodebaseIndex: CodebaseIndex2 } = await import("./codebase-search-AATGEN2H.js");
     const index = new CodebaseIndex2(process.cwd());
     const terms = task.toLowerCase().split(/\s+/).filter((w) => w.length > 4).slice(0, 3);
     if (terms.length === 0) return null;
@@ -46447,8 +46541,8 @@ function reviewedDiffWasTruncated(diff) {
 }
 
 // src/audit/pr-review-record-store.ts
-import { appendFileSync as appendFileSync4, existsSync as existsSync9, mkdirSync as mkdirSync6, readFileSync as readFileSync7 } from "fs";
-import { dirname as dirname4, isAbsolute, join as join9, resolve as resolve13 } from "path";
+import { appendFileSync as appendFileSync4, existsSync as existsSync10, mkdirSync as mkdirSync6, readFileSync as readFileSync8 } from "fs";
+import { dirname as dirname4, isAbsolute, join as join10, resolve as resolve13 } from "path";
 
 // src/audit/pr-review-record.ts
 import * as crypto3 from "crypto";
@@ -46579,7 +46673,7 @@ function assertNotSourceCheckoutWrite(filePath) {
   if (!isUnderTestRunner()) return;
   const here = findRepoRoot(process.cwd());
   if (here === null) return;
-  if (resolve13(filePath) !== resolve13(join9(here, PR_REVIEW_RECORDS_REL_PATH))) return;
+  if (resolve13(filePath) !== resolve13(join10(here, PR_REVIEW_RECORDS_REL_PATH))) return;
   throw new Error(
     `Refusing to write ${filePath} from a test run (#4415): this is the source checkout's tracked, hash-chained audit file, and a fabricated record that chains cleanly is indistinguishable from a real verdict. Pass repoPath to a throwaway repo, or set NEXUS_PR_REVIEW_RECORDS_PATH.`
   );
@@ -46591,17 +46685,17 @@ function resolvePrReviewRecordsPath(repoPathOverride) {
   }
   if (repoPathOverride !== void 0 && repoPathOverride.trim() !== "") {
     const overrideRoot = findRepoRoot(repoPathOverride);
-    if (overrideRoot !== null) return join9(overrideRoot, PR_REVIEW_RECORDS_REL_PATH);
+    if (overrideRoot !== null) return join10(overrideRoot, PR_REVIEW_RECORDS_REL_PATH);
   }
   const root = findRepoRoot(process.cwd());
   if (root === null) return void 0;
-  return join9(root, PR_REVIEW_RECORDS_REL_PATH);
+  return join10(root, PR_REVIEW_RECORDS_REL_PATH);
 }
 function readPrReviewRecords(filePath) {
   const records = [];
   const invalidLines = [];
-  if (!existsSync9(filePath)) return { records, invalidLines };
-  const lines = readFileSync7(filePath, "utf-8").split("\n").filter((l) => l.trim() !== "");
+  if (!existsSync10(filePath)) return { records, invalidLines };
+  const lines = readFileSync8(filePath, "utf-8").split("\n").filter((l) => l.trim() !== "");
   for (const [i, line] of lines.entries()) {
     try {
       const parsed = PrReviewRecordSchema.safeParse(JSON.parse(line));
@@ -46614,7 +46708,7 @@ function readPrReviewRecords(filePath) {
   return { records, invalidLines };
 }
 function readPrReviewLedgerTip(filePath, logger58) {
-  if (!existsSync9(filePath)) return { maxSequence: -1, lastHash: void 0 };
+  if (!existsSync10(filePath)) return { maxSequence: -1, lastHash: void 0 };
   try {
     const { records } = readPrReviewRecords(filePath);
     if (records.length === 0) return { maxSequence: -1, lastHash: void 0 };
@@ -47847,7 +47941,7 @@ function registerQueryTaskStateTool(server, deps) {
 import { z as z100 } from "zod";
 
 // src/mcp/tools/ci-health-log.ts
-import { appendFileSync as appendFileSync5, existsSync as existsSync11, readFileSync as readFileSync9, statSync as statSync2, writeFileSync as writeFileSync3 } from "fs";
+import { appendFileSync as appendFileSync5, existsSync as existsSync12, readFileSync as readFileSync10, statSync as statSync2, writeFileSync as writeFileSync3 } from "fs";
 import { z as z99 } from "zod";
 
 // src/mcp/tools/ci-health-types.ts
@@ -47889,7 +47983,7 @@ function capLogSize(path12) {
   }
   if (size <= max) return;
   try {
-    const lines = readFileSync9(path12, "utf-8").split("\n").filter((l) => l !== "");
+    const lines = readFileSync10(path12, "utf-8").split("\n").filter((l) => l !== "");
     const kept = [];
     let bytes = 0;
     for (let i = lines.length - 1; i >= 0; i--) {
@@ -48692,7 +48786,7 @@ function createMetaOrchestrator(options) {
 }
 
 // src/orchestration/meta-shadow-selector.ts
-import { appendFileSync as appendFileSync6, existsSync as existsSync12, readFileSync as readFileSync10 } from "fs";
+import { appendFileSync as appendFileSync6, existsSync as existsSync13, readFileSync as readFileSync11 } from "fs";
 import { z as z104 } from "zod";
 var SHADOW_STRATEGY_ARMS = [
   "single-shot",
@@ -48811,11 +48905,11 @@ function hydrateShadowSelector(selector) {
   const hydratable = selector;
   if (typeof hydratable.recordFromContext !== "function") return 0;
   const file = getMetaOutcomesFile();
-  if (!existsSync12(file)) return 0;
+  if (!existsSync13(file)) return 0;
   let replayed = 0;
   try {
     const cutoff = Date.now() - HYDRATE_LOOKBACK_MS;
-    const lines = readFileSync10(file, "utf-8").split("\n").filter((l) => l.trim().length > 0);
+    const lines = readFileSync11(file, "utf-8").split("\n").filter((l) => l.trim().length > 0);
     for (const line of lines) {
       let parsed;
       try {
@@ -54163,4 +54257,4 @@ export {
   shutdownFeedbackSubscriber,
   createEventBusBridge
 };
-//# sourceMappingURL=chunk-DDY7JDTZ.js.map
+//# sourceMappingURL=chunk-W7532ZQG.js.map