nexus-agents 2.77.8 → 2.77.10

package/dist/{chunk-BMOPMCFZ.js → chunk-7J7PNOJQ.js}

@@ -49,13 +49,24 @@ function detectWorkflowSecurity(workflowEntries, existing) {
   }
   return found;
 }
+var ROOT_SECURITY_FILES = [
+  [[".semgrep.yml", ".semgrep"], "semgrep"],
+  [[".snyk"], "snyk"],
+  [["SECURITY.md"], "security-policy"],
+  [[".grype.yaml"], "grype"],
+  [["CODEOWNERS"], "codeowners"],
+  // gitleaks (#2732). Catches `.gitleaks.toml` (canonical) plus legacy
+  // `gitleaks.toml` / `.gitleaksignore` variants. Without this, a repo
+  // carrying `.gitleaks.toml` reported `existingTooling` without gitleaks,
+  // and `repo_security_plan` then showed `secrets: covered: true,
+  // scanners: []` (covered by existing-but-undetected tooling).
+  [[".gitleaks.toml", "gitleaks.toml", ".gitleaksignore"], "gitleaks"]
+];
 function detectSecurityTooling(entries, workflowEntries) {
   const tools = [];
-  if (entries.includes(".semgrep.yml") || entries.includes(".semgrep")) tools.push("semgrep");
-  if (entries.includes(".snyk")) tools.push("snyk");
-  if (entries.includes("SECURITY.md")) tools.push("security-policy");
-  if (entries.includes(".grype.yaml")) tools.push("grype");
-  if (entries.includes("CODEOWNERS")) tools.push("codeowners");
+  for (const [files, tool] of ROOT_SECURITY_FILES) {
+    if (files.some((f) => entries.includes(f))) tools.push(tool);
+  }
   if (workflowEntries !== void 0) {
     tools.push(...detectWorkflowSecurity(workflowEntries, tools));
   }
@@ -359,4 +370,4 @@ export {
   analyzeRepo,
   analyzeGitHubRepo
 };
-//# sourceMappingURL=chunk-BMOPMCFZ.js.map
+//# sourceMappingURL=chunk-7J7PNOJQ.js.map

package/dist/chunk-7J7PNOJQ.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/mcp/tools/repo-analyze.ts"],"sourcesContent":["/* eslint-disable max-lines -- cohesive module, governance allows 400-600 */\n/**\n * nexus-agents/mcp - Repository Analyze Logic\n *\n * Inspects a GitHub repository and returns structured analysis\n * including language, tooling, CI, security, and gap identification.\n *\n * @module mcp/tools/repo-analyze\n * (Source: Issue #1074)\n */\n\nimport type { RepoAnalyzeInput, RepoAnalysis } from './repo-analyze-types.js';\n\n// ============================================================================\n// Helpers\n// ============================================================================\n\n/** Normalize \"owner/repo\" from either \"owner/repo\" or full GitHub URL. */\nexport function normalizeRepoId(input: string): string {\n  const urlMatch = /github\\.com\\/([^/]+\\/[^/]+?)(?:\\.git)?(?:\\/|$)/.exec(input);\n  const matched = urlMatch?.[1] ?? '';\n  if (matched.length > 0) return matched;\n  if (/^[^/]+\\/[^/]+$/.test(input)) return input;\n  throw new Error(`Invalid repo format: \"${input}\". Use \"owner/name\" or a GitHub URL.`);\n}\n\n/** Package manager detection rules: [files, manager]. First match wins. */\nconst PACKAGE_MANAGER_RULES: ReadonlyArray<readonly [readonly string[], string]> = [\n  [['pnpm-lock.yaml'], 'pnpm'],\n  [['yarn.lock'], 'yarn'],\n  [['package-lock.json', 'package.json'], 'npm'],\n  [['Cargo.toml'], 'cargo'],\n  [['go.mod'], 'go'],\n  [['requirements.txt', 'pyproject.toml'], 'pip'],\n  [['Gemfile'], 'bundler'],\n  [['pom.xml'], 'maven'],\n  [['build.gradle', 'build.gradle.kts'], 'gradle'],\n];\n\n/** Detect package manager from top-level files. */\nexport function detectPackageManager(entries: readonly string[]): string | null {\n  for (const [files, manager] of PACKAGE_MANAGER_RULES) {\n    if (files.some((f) => entries.includes(f))) return manager;\n  }\n  return null;\n}\n\n/** Detect CI provider from directory structure. */\nexport function detectCiProvider(entries: readonly string[]): string | null {\n  if (entries.includes('.github')) return 'github-actions';\n  if (entries.includes('.gitlab-ci.yml')) return 'gitlab-ci';\n  if (entries.includes('Jenkinsfile')) return 'jenkins';\n  if (entries.includes('.circleci')) return 'circleci';\n  if (entries.includes('.travis.yml')) return 'travis';\n  if (entries.includes('azure-pipelines.yml')) return 'azure-devops';\n  if (entries.includes('concourse')) return 'concourse';\n  return null;\n}\n\n/** Tool names detectable from CI workflow filenames (#1674). */\nconst WORKFLOW_SECURITY_PATTERNS: ReadonlyArray<readonly [string, string]> = [\n  ['semgrep', 'semgrep'],\n  ['codeql', 'codeql'],\n  ['grype', 'grype'],\n  ['snyk', 'snyk'],\n];\n\n/** Detect security tools from .github/workflows/ filenames. */\nfunction detectWorkflowSecurity(\n  workflowEntries: readonly string[],\n  existing: readonly string[]\n): readonly string[] {\n  const wfLower = workflowEntries.map((w) => w.toLowerCase());\n  const found: string[] = [];\n  for (const [pattern, tool] of WORKFLOW_SECURITY_PATTERNS) {\n    if (!existing.includes(tool) && wfLower.some((w) => w.includes(pattern))) {\n      found.push(tool);\n    }\n  }\n  return found;\n}\n\n/** Root-level config files that imply a security tool is in use. */\nconst ROOT_SECURITY_FILES: ReadonlyArray<readonly [readonly string[], string]> = [\n  [['.semgrep.yml', '.semgrep'], 'semgrep'],\n  [['.snyk'], 'snyk'],\n  [['SECURITY.md'], 'security-policy'],\n  [['.grype.yaml'], 'grype'],\n  [['CODEOWNERS'], 'codeowners'],\n  // gitleaks (#2732). Catches `.gitleaks.toml` (canonical) plus legacy\n  // `gitleaks.toml` / `.gitleaksignore` variants. Without this, a repo\n  // carrying `.gitleaks.toml` reported `existingTooling` without gitleaks,\n  // and `repo_security_plan` then showed `secrets: covered: true,\n  // scanners: []` (covered by existing-but-undetected tooling).\n  [['.gitleaks.toml', 'gitleaks.toml', '.gitleaksignore'], 'gitleaks'],\n];\n\n/** Detect security tooling from root files and CI workflow filenames (#1674). */\nexport function detectSecurityTooling(\n  entries: readonly string[],\n  workflowEntries?: readonly string[]\n): readonly string[] {\n  const tools: string[] = [];\n  for (const [files, tool] of ROOT_SECURITY_FILES) {\n    if (files.some((f) => entries.includes(f))) tools.push(tool);\n  }\n  if (workflowEntries !== undefined) {\n    tools.push(...detectWorkflowSecurity(workflowEntries, tools));\n  }\n  return tools;\n}\n\n/** Detect framework from package manager config. */\nexport function detectFramework(entries: readonly string[]): string | null {\n  if (entries.includes('helmfile.yaml') || entries.includes('helmfile.yaml.gotmpl'))\n    return 'helmfile';\n  if (entries.includes('next.config.js') || entries.includes('next.config.ts')) return 'nextjs';\n  if (entries.includes('angular.json')) return 'angular';\n  if (entries.includes('vite.config.ts') || entries.includes('vite.config.js')) return 'vite';\n  if (entries.includes('tsconfig.json') && entries.includes('package.json')) return 'typescript';\n  return null;\n}\n\n/** Gap detection rules: [files-any-present, gap message]. */\nconst GAP_RULES: ReadonlyArray<readonly [readonly string[], string]> = [\n  [['SECURITY.md'], 'No SECURITY.md policy'],\n  [['CODEOWNERS'], 'No CODEOWNERS file'],\n  [['LICENSE', 'LICENSE.md'], 'No LICENSE file'],\n  [\n    ['.semgrep.yml', '.semgrep', '.grype.yaml', '.snyk'],\n    'No SAST/SCA security scanning configured',\n  ],\n  // Test detection handled separately via detectTestInfra (supports monorepo + co-located patterns)\n  [['.gitignore'], 'No .gitignore file'],\n];\n\n/** Scanner recommendation per language. Canonical source: secure-language-stacks. */\ninterface LanguageScanners {\n  readonly sast: readonly string[];\n  readonly sca: readonly string[];\n}\n\nconst LANGUAGE_SCANNER_MATRIX: Readonly<Record<string, LanguageScanners>> = {\n  TypeScript: {\n    sast: ['semgrep (p/typescript, p/nodejs)', 'eslint-plugin-security'],\n    sca: ['osv-scanner', 'npm audit'],\n  },\n  JavaScript: {\n    sast: ['semgrep (p/javascript, p/nodejs)', 'eslint-plugin-security'],\n    sca: ['osv-scanner', 'npm audit'],\n  },\n  Python: {\n    sast: ['semgrep (p/python)', 'bandit'],\n    sca: ['osv-scanner', 'pip-audit'],\n  },\n  Java: {\n    sast: ['semgrep (p/java)', 'spotbugs + find-sec-bugs'],\n    sca: ['osv-scanner', 'OWASP dependency-check'],\n  },\n  Go: {\n    sast: ['semgrep (p/golang)', 'gosec'],\n    sca: ['osv-scanner', 'govulncheck'],\n  },\n  Rust: {\n    sast: ['semgrep (p/rust)'],\n    sca: ['osv-scanner', 'cargo-audit'],\n  },\n  'C++': {\n    sast: ['semgrep (p/c)', 'cppcheck'],\n    sca: ['osv-scanner'],\n  },\n  C: {\n    sast: ['semgrep (p/c)', 'cppcheck'],\n    sca: ['osv-scanner'],\n  },\n  Kotlin: {\n    sast: ['semgrep (p/kotlin)', 'detekt'],\n    sca: ['osv-scanner', 'OWASP dependency-check'],\n  },\n  Swift: {\n    sast: ['semgrep (p/swift)'],\n    sca: ['osv-scanner'],\n  },\n  Ruby: {\n    sast: ['semgrep (p/ruby)', 'brakeman'],\n    sca: ['osv-scanner', 'bundler-audit'],\n  },\n  PHP: {\n    sast: ['semgrep (p/php)', 'phpstan'],\n    sca: ['osv-scanner', 'composer audit'],\n  },\n  Shell: {\n    sast: ['semgrep (p/bash)', 'shellcheck'],\n    sca: [],\n  },\n  HCL: {\n    sast: ['semgrep (p/terraform)', 'tfsec'],\n    sca: ['osv-scanner'],\n  },\n};\n\n/** Generate language-specific scanner recommendations when SAST/SCA is missing. */\nexport function getLanguageRecommendations(\n  language: string | null,\n  securityTooling: readonly string[]\n): readonly string[] {\n  if (language === null) return [];\n  const scanners = LANGUAGE_SCANNER_MATRIX[language];\n  if (scanners === undefined) return [];\n\n  const hasSast = securityTooling.includes('semgrep') || securityTooling.includes('snyk');\n  const hasSca =\n    securityTooling.includes('osv-scanner') ||\n    securityTooling.includes('grype') ||\n    securityTooling.includes('snyk');\n\n  const recs: string[] = [];\n  if (!hasSast && scanners.sast.length > 0) {\n    const tools = scanners.sast.join(', ');\n    recs.push(`${language} project missing SAST: ${tools}`);\n  }\n  if (!hasSca && scanners.sca.length > 0) {\n    const tools = scanners.sca.join(', ');\n    recs.push(`${language} project missing SCA: ${tools}`);\n  }\n  return recs;\n}\n\n/** SAST tool names that suppress the generic gap message. */\nconst SAST_TOOLS = new Set(['semgrep', 'codeql', 'snyk']);\nconst SAST_GAP_MSG = 'No SAST/SCA security scanning configured';\n\n/** Remove the SAST/SCA gap if any SAST tool was detected (#1674). */\nfunction removeSastGapIfToolDetected(gaps: string[], secTools: readonly string[]): void {\n  if (secTools.some((t) => SAST_TOOLS.has(t))) {\n    const idx = gaps.indexOf(SAST_GAP_MSG);\n    if (idx !== -1) gaps.splice(idx, 1);\n  }\n}\n\n/** Identify gaps in repository best practices. */\nexport function identifyGaps(\n  entries: readonly string[],\n  ciProvider: string | null,\n  language?: string | null,\n  securityTooling?: readonly string[]\n): readonly string[] {\n  const gaps: string[] = [];\n  if (ciProvider === null) gaps.push('No CI/CD configuration detected');\n  for (const [files, message] of GAP_RULES) {\n    if (!files.some((f) => entries.includes(f))) gaps.push(message);\n  }\n  // Test detection: uses detectTestInfra for monorepo + co-located pattern support (#1130)\n  if (!detectTestInfra(entries)) gaps.push('No test directory detected');\n\n  // Remove SAST/SCA gap if workflow-level security was detected (#1674)\n  removeSastGapIfToolDetected(gaps, securityTooling ?? []);\n\n  // Language-specific recommendations when generic SAST/SCA gap detected\n  const hasGenericSecGap = gaps.includes('No SAST/SCA security scanning configured');\n  if (\n    hasGenericSecGap &&\n    language !== null &&\n    language !== undefined &&\n    securityTooling !== undefined\n  ) {\n    const langRecs = getLanguageRecommendations(language, securityTooling);\n    gaps.push(...langRecs);\n  }\n\n  return gaps;\n}\n\n// ============================================================================\n// Core\n// ============================================================================\n\n/** GitHub repo metadata from the API. */\nexport interface GhRepoMetadata {\n  readonly name: string;\n  readonly full_name: string;\n  readonly description: string | null;\n  readonly language: string | null;\n  readonly default_branch: string;\n  readonly stargazers_count: number;\n  readonly license: { readonly spdx_id: string } | null;\n}\n\n/** Analyze a GitHub repository given its metadata and file tree. */\nexport function analyzeRepo(\n  metadata: GhRepoMetadata,\n  topLevelEntries: readonly string[],\n  workflowEntries?: readonly string[]\n): RepoAnalysis {\n  const ciProvider = detectCiProvider(topLevelEntries);\n  const secTooling = detectSecurityTooling(topLevelEntries, workflowEntries);\n  const hasTests = detectTestInfra(topLevelEntries);\n\n  return {\n    name: metadata.full_name,\n    language: metadata.language,\n    framework: detectFramework(topLevelEntries),\n    packageManager: detectPackageManager(topLevelEntries),\n    ciProvider,\n    securityTooling: secTooling,\n    // Match `Dockerfile`, `Dockerfile.<purpose>` (e.g. `Dockerfile.sandbox`),\n    // and docker-compose variants. Pre-#2730 the check was exact-match only,\n    // so a repo with three legitimate `Dockerfile.*` files reported false.\n    hasDockerfile:\n      topLevelEntries.some((e) => e === 'Dockerfile' || e.startsWith('Dockerfile.')) ||\n      topLevelEntries.includes('docker-compose.yml') ||\n      topLevelEntries.includes('docker-compose.yaml'),\n    hasHelmCharts:\n      topLevelEntries.includes('Chart.yaml') ||\n      topLevelEntries.includes('charts') ||\n      topLevelEntries.includes('helm'),\n    hasMakefile: topLevelEntries.includes('Makefile'),\n    hasTests,\n    license: metadata.license?.spdx_id ?? null,\n    description: metadata.description,\n    defaultBranch: metadata.default_branch,\n    stars: metadata.stargazers_count,\n    topLevelEntries: [...topLevelEntries],\n    gaps: identifyGaps(topLevelEntries, ciProvider, metadata.language, secTooling),\n  };\n}\n\n/** Non-code languages to exclude when detecting primary language. */\nconst MARKUP_LANGUAGES = new Set([\n  'HTML',\n  'CSS',\n  'SCSS',\n  'Less',\n  'Markdown',\n  'Roff',\n  'SVG',\n  'XML',\n  'XSLT',\n  'Mustache',\n  'Handlebars',\n  'EJS',\n]);\n\n/** Detect primary language from GitHub languages API (byte counts). */\nfunction detectPrimaryLanguage(\n  languages: Record<string, number>,\n  fallback: string | null\n): string | null {\n  const sorted = Object.entries(languages)\n    .filter(([lang]) => !MARKUP_LANGUAGES.has(lang))\n    .sort((a, b) => b[1] - a[1]);\n  const top = sorted[0];\n  return top !== undefined ? top[0] : fallback;\n}\n\n/** Check for test infrastructure beyond top-level directories. */\nfunction detectTestInfra(entries: readonly string[]): boolean {\n  const testDirs = ['tests', 'test', '__tests__', 'spec'];\n  if (testDirs.some((d) => entries.includes(d))) return true;\n  // Check for test config files (co-located test pattern, monorepos)\n  const testConfigs = [\n    'vitest.config.ts',\n    'vitest.config.js',\n    'vitest.config.mts',\n    'vitest.workspace.ts',\n    'vitest.workspace.js',\n    'jest.config.ts',\n    'jest.config.js',\n    'jest.config.mjs',\n    'cypress.config.ts',\n    'cypress.config.js',\n    'playwright.config.ts',\n    '.mocharc.yml',\n    '.mocharc.json',\n  ];\n  if (testConfigs.some((c) => entries.includes(c))) return true;\n  // Monorepo: packages/ dir + package.json implies co-located tests\n  return entries.includes('packages') && entries.includes('package.json');\n}\n\n/** Infer code language from project files when GitHub reports markup. */\nfunction inferLanguageFromEntries(\n  entries: readonly string[],\n  fallback: string | null\n): string | null {\n  if (entries.includes('tsconfig.json')) return 'TypeScript';\n  if (entries.includes('Cargo.toml')) return 'Rust';\n  if (entries.includes('go.mod')) return 'Go';\n  if (entries.includes('pyproject.toml') || entries.includes('setup.py')) return 'Python';\n  if (entries.includes('pom.xml') || entries.includes('build.gradle')) return 'Java';\n  if (entries.includes('Gemfile')) return 'Ruby';\n  if (entries.includes('package.json')) return 'JavaScript';\n  return fallback;\n}\n\ntype ExecFileFn = (\n  cmd: string,\n  args: string[],\n  options?: { timeout?: number }\n) => Promise<{ stdout: string }>;\n\n/** Lazy-load promisified execFile. */\nasync function getExecFile(): Promise<ExecFileFn> {\n  const { execFile } = await import('node:child_process');\n  const { promisify } = await import('node:util');\n  return promisify(execFile);\n}\n\n/** Fetch repo metadata and languages via GitHub API. */\nasync function fetchRepoData(\n  repoId: string,\n  exec: ExecFileFn\n): Promise<{ metadata: GhRepoMetadata; entries: string[] }> {\n  const { stdout: metaJson } = await exec(\n    'gh',\n    [\n      'api',\n      `repos/${repoId}`,\n      '--jq',\n      '{name: .name, full_name: .full_name, description: .description, language: .language, default_branch: .default_branch, stargazers_count: .stargazers_count, license: .license}',\n    ],\n    { timeout: 30_000 }\n  );\n  let metadata: GhRepoMetadata;\n  try {\n    metadata = JSON.parse(metaJson.trim()) as GhRepoMetadata;\n  } catch {\n    throw new Error(`Failed to parse repo metadata for ${repoId}: ${metaJson.slice(0, 200)}`);\n  }\n  const { stdout: contentsJson } = await exec(\n    'gh',\n    ['api', `repos/${repoId}/contents`, '--jq', '[.[].name]'],\n    { timeout: 30_000 }\n  );\n  let entries: string[];\n  try {\n    const parsed: unknown = JSON.parse(contentsJson.trim());\n    entries = Array.isArray(parsed) ? parsed.filter((e): e is string => typeof e === 'string') : [];\n  } catch {\n    throw new Error(`Failed to parse repo contents for ${repoId}: ${contentsJson.slice(0, 200)}`);\n  }\n  return { metadata, entries };\n}\n\n/** Resolve NOASSERTION license via the GitHub license API. */\nasync function resolveLicense(repoId: string, exec: ExecFileFn): Promise<string | null> {\n  try {\n    const { stdout } = await exec(\n      'gh',\n      ['api', `repos/${repoId}/license`, '--jq', '.license.spdx_id'],\n      { timeout: 15_000 }\n    );\n    const spdxId = stdout.trim();\n    if (spdxId !== '' && spdxId !== 'null' && spdxId !== 'NOASSERTION') {\n      return spdxId;\n    }\n  } catch {\n    // Keep NOASSERTION if license API also fails\n  }\n  return null;\n}\n\n/** Resolve primary language, falling back to entry inference for markup repos. */\nasync function resolveLanguage(\n  repoId: string,\n  entries: readonly string[],\n  metadata: GhRepoMetadata,\n  exec: ExecFileFn\n): Promise<string | null> {\n  let languages: Record<string, number> = {};\n  try {\n    const { stdout } = await exec('gh', ['api', `repos/${repoId}/languages`], { timeout: 15_000 });\n    languages = JSON.parse(stdout.trim()) as Record<string, number>;\n  } catch {\n    /* fall back to metadata.language */\n  }\n  const primary = detectPrimaryLanguage(languages, metadata.language);\n  if (primary === null || MARKUP_LANGUAGES.has(primary)) {\n    return inferLanguageFromEntries(entries, primary);\n  }\n  return primary;\n}\n\n/** Fetch workflow filenames from .github/workflows/ (#1674). Best-effort. */\nasync function fetchWorkflowEntries(repoId: string, exec: ExecFileFn): Promise<readonly string[]> {\n  try {\n    const { stdout } = await exec(\n      'gh',\n      ['api', `repos/${repoId}/contents/.github/workflows`, '--jq', '[.[].name]'],\n      { timeout: 15_000 }\n    );\n    const parsed: unknown = JSON.parse(stdout.trim());\n    return Array.isArray(parsed) ? parsed.filter((e): e is string => typeof e === 'string') : [];\n  } catch {\n    return []; // No workflows directory or API error — graceful fallback\n  }\n}\n\n/** Fetch repo data from GitHub and produce analysis. */\nexport async function analyzeGitHubRepo(input: RepoAnalyzeInput): Promise<RepoAnalysis> {\n  const repoId = normalizeRepoId(input.repo);\n  const exec = await getExecFile();\n  const { metadata, entries } = await fetchRepoData(repoId, exec);\n\n  const primaryLang = await resolveLanguage(repoId, entries, metadata, exec);\n  const enhanced = { ...metadata, language: primaryLang };\n\n  // Resolve null or NOASSERTION license when LICENSE file exists\n  const hasLicenseFile = entries.includes('LICENSE') || entries.includes('LICENSE.md');\n  const licenseUnresolved = enhanced.license === null || enhanced.license.spdx_id === 'NOASSERTION';\n  if (licenseUnresolved && hasLicenseFile) {\n    const resolved = await resolveLicense(repoId, exec);\n    if (resolved !== null) enhanced.license = { spdx_id: resolved };\n  }\n\n  // Fetch workflow filenames for CI-level security detection (#1674)\n  const workflowEntries = entries.includes('.github')\n    ? await fetchWorkflowEntries(repoId, exec)\n    : [];\n\n  return analyzeRepo(enhanced, entries, 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package/dist/{chunk-M5NSVRK6.js → chunk-BEW2Z7M6.js}

@@ -53,10 +53,10 @@ import {
 } from "./chunk-ERWXGXV2.js";
 import {
   generateSecurityPlan
-} from "./chunk-WXVN4K3D.js";
+} from "./chunk-G2CSKBY5.js";
 import {
   analyzeGitHubRepo
-} from "./chunk-BMOPMCFZ.js";
+} from "./chunk-7J7PNOJQ.js";
 import {
   CodebaseIndex
 } from "./chunk-AP2FD37C.js";
@@ -70,7 +70,7 @@ import {
   clampTaskTtl,
   getAvailabilityCache,
   resolveFallback
-} from "./chunk-35C7VCMT.js";
+} from "./chunk-C53AFVJB.js";
 import {
   DEFAULTS
 } from "./chunk-YQMQSJQK.js";
@@ -24588,7 +24588,8 @@ var PaperStatusSchema = z43.enum([
   "partial",
   "in-progress",
   "not-started",
-  "rejected"
+  "rejected",
+  "deferred"
 ]);
 var TechniquePrioritySchema = z43.enum(["P1", "P2", "P3", "P4"]).nullable();
 var TechniqueComplexitySchema = z43.enum(["low", "medium", "high"]);
@@ -24835,6 +24836,17 @@ function computeSourceEvidenceTier(source) {
 }
 
 // src/indexer/research-index/research-index-parser.ts
+function buildValidationError(filePath, validationErr) {
+  const zodErr = validationErr;
+  const issues = zodErr.issues ?? [];
+  const issuesPreview = issues.slice(0, 5).map((i) => `${i.path.slice(0, 4).join(".")}: ${i.message}`).join("; ");
+  const more = issues.length > 5 ? ` (+${String(issues.length - 5)} more)` : "";
+  return new ResearchIndexParseError(
+    issuesPreview.length > 0 ? `Validation failed for ${filePath} \u2014 ${issuesPreview}${more}` : `Validation failed for ${filePath}`,
+    filePath,
+    validationErr
+  );
+}
 function readYamlFile(filePath, schema, defaultIfMissing) {
   try {
     if (!fs3.existsSync(filePath)) {
@@ -24853,14 +24865,7 @@ function readYamlFile(filePath, schema, defaultIfMissing) {
     const parsed = yaml2.parse(content);
     const result = schema.safeParse(parsed);
     if (!result.success) {
-      return {
-        ok: false,
-        error: new ResearchIndexParseError(
-          `Validation failed for ${filePath}`,
-          filePath,
-          result.error
-        )
-      };
+      return { ok: false, error: buildValidationError(filePath, result.error) };
     }
     return { ok: true, value: result.data };
   } catch (error) {
@@ -43732,7 +43737,7 @@ function createAnalyzeStageWrapper() {
             true
           );
         }
-        const { analyzeGitHubRepo: analyzeGitHubRepo2 } = await import("./repo-analyze-QGLXEFVJ.js");
+        const { analyzeGitHubRepo: analyzeGitHubRepo2 } = await import("./repo-analyze-GBQT4LAK.js");
         const analysis = await analyzeGitHubRepo2({ repo: slug, depth: "deep" });
         const summary = `Language: ${String(analysis.language)}, Framework: ${String(analysis.framework)}, CI: ${String(analysis.ciProvider)}, Security: ${analysis.securityTooling.join(", ") || "none"}`;
         ctx.sharedMemory.write("analyze", "discovery", { slug, analysis: summary });
@@ -43752,7 +43757,7 @@ function createScanStageWrapper() {
       try {
         const slug = ctx.task.match(/([a-zA-Z0-9._-]+\/[a-zA-Z0-9._-]+)/)?.[1];
         if (slug !== void 0) {
-          const { generateSecurityPlan: generateSecurityPlan2 } = await import("./repo-security-plan-X5CRZ2YY.js");
+          const { generateSecurityPlan: generateSecurityPlan2 } = await import("./repo-security-plan-7ZCDVH5O.js");
           const plan = await generateSecurityPlan2({ repo: slug, maxScanners: 10 });
           const recs = plan.recommendations.slice(0, 5).map((r) => `${r.priority}: ${r.displayName} (${r.category})`).join("; ");
           ctx.sharedMemory.write("scan", "decision", { recommendations: recs });
@@ -49765,6 +49770,7 @@ export {
   PROMPT_DEFINITIONS,
   registerPrompts,
   registerModelsResource,
+  PaperStatusSchema,
   registerResearchResource,
   getSharedCliCache,
   CreateExpertInputSchema,
@@ -50023,4 +50029,4 @@ export {
   detectBackend,
   createTaskTracker
 };
-//# sourceMappingURL=chunk-M5NSVRK6.js.map
+//# sourceMappingURL=chunk-BEW2Z7M6.js.map