neotoma 0.3.3 → 0.3.5

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Files changed (7) hide show
  1. package/dist/services/entity_queries.d.ts.map +1 -1
  2. package/dist/services/entity_queries.js +23 -21
  3. package/dist/services/entity_queries.js.map +1 -1
  4. package/dist/shared/action_handlers/entity_handlers.d.ts.map +1 -1
  5. package/dist/shared/action_handlers/entity_handlers.js +45 -13
  6. package/dist/shared/action_handlers/entity_handlers.js.map +1 -1
  7. package/package.json +1 -1
package/dist/services/entity_queries.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"entity_queries.d.ts","sourceRoot":"","sources":["../../src/services/entity_queries.ts"],"names":[],"mappings":"AAKA,MAAM,WAAW,kBAAkB;IACjC,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB,cAAc,CAAC,EAAE,OAAO,CAAC;IACzB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,6EAA6E;IAC7E,SAAS,CAAC,EAAE,MAAM,EAAE,CAAC;CACtB;AAED,MAAM,WAAW,oBAAoB;IACnC,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,cAAc,EAAE,MAAM,CAAC;IACvB,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,QAAQ,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IAClC,aAAa,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACxC,iBAAiB,EAAE,MAAM,CAAC;IAC1B,mBAAmB,EAAE,MAAM,CAAC;IAC5B,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACpC,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,mBAAmB,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACpC,SAAS,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;CAC3B;AAcD;;GAEG;AACH,wBAAsB,aAAa,CACjC,OAAO,GAAE,kBAAuB,GAC/B,OAAO,CAAC,oBAAoB,EAAE,CAAC,CA2PjC;AAED;;;;GAIG;AACH,wBAAsB,uBAAuB,CAC3C,QAAQ,EAAE,MAAM,EAChB,cAAc,GAAE,OAAe,GAC9B,OAAO,CAAC,oBAAoB,GAAG,IAAI,CAAC,CAgItC;AAED;;GAEG;AACH,wBAAsB,iBAAiB,CAAC,QAAQ,EAAE,MAAM,gBAYvD;AAED;;GAEG;AACH,wBAAsB,yBAAyB,CAAC,KAAK,EAAE,MAAM,gBAY5D;AAED;;GAEG;AACH,wBAAsB,wBAAwB,CAAC,aAAa,EAAE,MAAM,gBAwCnE"}
1
+ {"version":3,"file":"entity_queries.d.ts","sourceRoot":"","sources":["../../src/services/entity_queries.ts"],"names":[],"mappings":"AAKA,MAAM,WAAW,kBAAkB;IACjC,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB,cAAc,CAAC,EAAE,OAAO,CAAC;IACzB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,6EAA6E;IAC7E,SAAS,CAAC,EAAE,MAAM,EAAE,CAAC;CACtB;AAED,MAAM,WAAW,oBAAoB;IACnC,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,cAAc,EAAE,MAAM,CAAC;IACvB,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,QAAQ,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IAClC,aAAa,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACxC,iBAAiB,EAAE,MAAM,CAAC;IAC1B,mBAAmB,EAAE,MAAM,CAAC;IAC5B,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACpC,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,mBAAmB,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACpC,SAAS,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;CAC3B;AAcD;;GAEG;AACH,wBAAsB,aAAa,CACjC,OAAO,GAAE,kBAAuB,GAC/B,OAAO,CAAC,oBAAoB,EAAE,CAAC,CA6PjC;AAED;;;;GAIG;AACH,wBAAsB,uBAAuB,CAC3C,QAAQ,EAAE,MAAM,EAChB,cAAc,GAAE,OAAe,GAC9B,OAAO,CAAC,oBAAoB,GAAG,IAAI,CAAC,CAgItC;AAED;;GAEG;AACH,wBAAsB,iBAAiB,CAAC,QAAQ,EAAE,MAAM,gBAYvD;AAED;;GAEG;AACH,wBAAsB,yBAAyB,CAAC,KAAK,EAAE,MAAM,gBAY5D;AAED;;GAEG;AACH,wBAAsB,wBAAwB,CAAC,aAAa,EAAE,MAAM,gBAwCnE"}
package/dist/services/entity_queries.js CHANGED
@@ -9,7 +9,7 @@ export async function queryEntities(options = {}) {
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  // Build query for entities
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  let entityQuery = db
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  .from("entities")
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- .select("id, entity_type, canonical_name, user_id, merged_to_entity_id, merged_at");
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+ .select("id, entity_type, canonical_name, user_id, merged_to_entity_id, merged_at, created_at");
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  // Filter by user if provided
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  if (userId) {
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  entityQuery = entityQuery.eq("user_id", userId);
@@ -26,32 +26,24 @@ export async function queryEntities(options = {}) {
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  if (filterEntityIds && filterEntityIds.length > 0) {
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  entityQuery = entityQuery.in("id", filterEntityIds);
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  }
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- entityQuery = entityQuery.range(offset, offset + limit - 1);
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- const { data: entitiesData, error: entitiesError } = await entityQuery;
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+ // Always use a deterministic order so pagination is stable across calls.
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+ entityQuery = entityQuery.order("id", { ascending: true });
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+ const { data: baseEntitiesData, error: entitiesError } = await entityQuery;
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  if (entitiesError) {
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  throw new Error(`Failed to query entities: ${entitiesError.message}`);
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  }
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- if (!entitiesData || entitiesData.length === 0) {
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+ if (!baseEntitiesData || baseEntitiesData.length === 0) {
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  return [];
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  }
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- // Get snapshots for entities
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- let entities = entitiesData;
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- const entityIds = entities.map((e) => e.id);
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- const { data: snapshots, error: snapshotsError } = await db
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- .from("entity_snapshots")
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- .select("*")
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- .in("entity_id", entityIds);
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- if (snapshotsError) {
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- throw new Error(`Failed to query snapshots: ${snapshotsError.message}`);
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- }
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- // Filter deleted entities unless explicitly requested
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- let filteredEntityIds = entityIds;
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+ // Filter deleted entities unless explicitly requested, then paginate.
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+ let entities = baseEntitiesData;
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  if (!includeDeleted) {
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+ const allEntityIds = entities.map((e) => e.id);
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  // Check for deletion observations (highest priority with _deleted: true)
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  const { data: deletionObservations } = await db
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  .from("observations")
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  .select("entity_id, source_priority, observed_at, fields")
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- .in("entity_id", entityIds)
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+ .in("entity_id", allEntityIds)
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  .order("source_priority", { ascending: false })
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  .order("observed_at", { ascending: false });
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  // Find entities with deletion observations
@@ -80,11 +72,21 @@ export async function queryEntities(options = {}) {
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  }
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  }
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  // Filter out deleted entities
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- filteredEntityIds = entityIds.filter((id) => !deletedEntityIds.has(id));
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  entities = entities.filter((e) => !deletedEntityIds.has(e.id));
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- if (entities.length === 0) {
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- return [];
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- }
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+ }
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+ entities = entities.slice(offset, offset + limit);
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+ if (entities.length === 0) {
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+ return [];
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+ }
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+ // Get snapshots for entities on the selected page
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+ const entityIds = entities.map((e) => e.id);
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+ const filteredEntityIds = entityIds;
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+ const { data: snapshots, error: snapshotsError } = await db
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+ .from("entity_snapshots")
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+ .select("*")
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+ .in("entity_id", entityIds);
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+ if (snapshotsError) {
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+ throw new Error(`Failed to query snapshots: ${snapshotsError.message}`);
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  }
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  // Combine entities with snapshots
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  const snapshotMap = new Map((snapshots || []).map((s) => [s.entity_id, s]));
package/dist/services/entity_queries.js.map CHANGED
@@ -1 +1 @@
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package/dist/shared/action_handlers/entity_handlers.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"entity_handlers.d.ts","sourceRoot":"","sources":["../../../src/shared/action_handlers/entity_handlers.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,kCAAkC,CAAC;AAE7E,UAAU,mBAAmB;IAC3B,MAAM,EAAE,MAAM,CAAC;IACf,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,mBAAmB,CAAC,EAAE,MAAM,CAAC;IAC7B,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED,wBAAsB,sBAAsB,CAAC,MAAM,EAAE,mBAAmB,GAAG,OAAO,CAAC;IACjF,QAAQ,EAAE,oBAAoB,EAAE,CAAC;IACjC,KAAK,EAAE,MAAM,CAAC;IACd,eAAe,EAAE,OAAO,CAAC;CAC1B,CAAC,CAqFD;AAED,wBAAgB,sBAAsB,CAAC,CAAC,SAAS;IAAE,cAAc,EAAE,MAAM,CAAA;CAAE,EACzE,QAAQ,EAAE,CAAC,EAAE,EACb,MAAM,CAAC,EAAE,MAAM,GACd,CAAC,EAAE,CAIL"}
1
+ {"version":3,"file":"entity_handlers.d.ts","sourceRoot":"","sources":["../../../src/shared/action_handlers/entity_handlers.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,kCAAkC,CAAC;AAE7E,UAAU,mBAAmB;IAC3B,MAAM,EAAE,MAAM,CAAC;IACf,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,mBAAmB,CAAC,EAAE,MAAM,CAAC;IAC7B,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AA2DD,wBAAsB,sBAAsB,CAAC,MAAM,EAAE,mBAAmB,GAAG,OAAO,CAAC;IACjF,QAAQ,EAAE,oBAAoB,EAAE,CAAC;IACjC,KAAK,EAAE,MAAM,CAAC;IACd,eAAe,EAAE,OAAO,CAAC;CAC1B,CAAC,CAyED;AAED,wBAAgB,sBAAsB,CAAC,CAAC,SAAS;IAAE,cAAc,EAAE,MAAM,CAAA;CAAE,EACzE,QAAQ,EAAE,CAAC,EAAE,EACb,MAAM,CAAC,EAAE,MAAM,GACd,CAAC,EAAE,CAIL"}
package/dist/shared/action_handlers/entity_handlers.js CHANGED
@@ -2,6 +2,50 @@ import { db } from "../../db.js";
2
2
  import { queryEntities } from "../../services/entity_queries.js";
3
3
  import { logger } from "../../utils/logger.js";
4
4
  import { semanticSearchEntities } from "../../services/entity_semantic_search.js";
5
+ async function countVisibleEntities(params) {
6
+ const { userId, entityType, includeMerged = false } = params;
7
+ let entityIdQuery = db.from("entities").select("id").eq("user_id", userId);
8
+ if (entityType) {
9
+ entityIdQuery = entityIdQuery.eq("entity_type", entityType);
10
+ }
11
+ if (!includeMerged) {
12
+ entityIdQuery = entityIdQuery.is("merged_to_entity_id", null);
13
+ }
14
+ const { data: entityRows, error: entityError } = await entityIdQuery;
15
+ if (entityError) {
16
+ throw new Error(`Failed to query entity ids for count: ${entityError.message}`);
17
+ }
18
+ if (!entityRows || entityRows.length === 0) {
19
+ return 0;
20
+ }
21
+ const entityIds = entityRows.map((row) => row.id);
22
+ const deletedEntityIds = new Set();
23
+ const chunkSize = 500;
24
+ for (let i = 0; i < entityIds.length; i += chunkSize) {
25
+ const chunk = entityIds.slice(i, i + chunkSize);
26
+ const { data: deletionObservations, error: observationsError } = await db
27
+ .from("observations")
28
+ .select("entity_id, source_priority, observed_at, fields")
29
+ .in("entity_id", chunk)
30
+ .order("source_priority", { ascending: false })
31
+ .order("observed_at", { ascending: false });
32
+ if (observationsError) {
33
+ throw new Error(`Failed to query deletion observations for count: ${observationsError.message}`);
34
+ }
35
+ const highestByEntity = new Map();
36
+ for (const obs of deletionObservations || []) {
37
+ if (!highestByEntity.has(obs.entity_id)) {
38
+ highestByEntity.set(obs.entity_id, obs);
39
+ }
40
+ }
41
+ for (const [entityId, obs] of highestByEntity.entries()) {
42
+ if (obs.fields?._deleted === true) {
43
+ deletedEntityIds.add(entityId);
44
+ }
45
+ }
46
+ }
47
+ return entityIds.length - deletedEntityIds.size;
48
+ }
5
49
  export async function queryEntitiesWithCount(params) {
6
50
  const { userId, entityType, includeMerged = false, search, similarityThreshold, limit = 100, offset = 0, } = params;
7
51
  let entities;
@@ -55,19 +99,7 @@ export async function queryEntitiesWithCount(params) {
55
99
  limit,
56
100
  offset,
57
101
  });
58
- let countQuery = db.from("entities").select("*", { count: "exact", head: true });
59
- countQuery = countQuery.eq("user_id", userId);
60
- if (entityType) {
61
- countQuery = countQuery.eq("entity_type", entityType);
62
- }
63
- if (!includeMerged) {
64
- countQuery = countQuery.is("merged_to_entity_id", null);
65
- }
66
- const { count, error: countError } = await countQuery;
67
- if (countError) {
68
- throw new Error(`Failed to count entities: ${countError.message}`);
69
- }
70
- total = count || 0;
102
+ total = await countVisibleEntities({ userId, entityType, includeMerged });
71
103
  }
72
104
  return {
73
105
  entities,
package/dist/shared/action_handlers/entity_handlers.js.map CHANGED
@@ -1 +1 @@
1
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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "neotoma",
3
- "version": "0.3.3",
3
+ "version": "0.3.5",
4
4
  "description": "MCP server for structured personal data memory with unified source ingestion",
5
5
  "main": "dist/index.js",
6
6
  "type": "module",