nemar-cli 0.9.10-PR1171.1bbeb00 → 0.9.10-PR1171.95f024b
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/index.js +1 -1
- package/package.json +1 -1
package/dist/index.js
CHANGED
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@@ -102,7 +102,7 @@ ${u.dim(`eta: ${e.eta}`)}`:"";process.stderr.write(`${t}
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${r} ${e.message}
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${n}${i}
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${t}
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-
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URLSearchParams({q:e});if(t.modality)r.set("modality",t.modality);if(t.limit)r.set("limit",String(t.limit));if(t.hasHed)r.set("has_hed","1");if(t.author)r.set("author",t.author);if(t.task)r.set("task",t.task);if(t.license)r.set("license",t.license);if(t.hasDoi)r.set("has_doi","true");if(t.dataComplete)r.set("data_complete","1");if(t.recent)r.set("recent",String(t.recent));if(t.facets)for(let[i,s]of Object.entries(t.facets))r.set(i,s);if(t.includeUnknown)r.set("include_unknown","1");return await I(`/datasets/search?${r.toString()}`,{},"optional",Hz)}async function gt(e){let t=await I(`/datasets/${e}`,{},"optional");return Wz(t.dataset)}async function Jz(e){return I(`/datasets/${e}/versions`,{},!0)}async function Cm(e){return I("/datasets",{method:"POST",body:JSON.stringify(e)},!0)}async function Fm(e){return I(`/datasets/${e}/finalize`,{method:"POST"},!0)}async function nD(e){return I(`/datasets/${e}/request-access`,{method:"POST"},!0)}async function Xz(e,t){let r=t?`?status=${t}`:"";return I(`/datasets/${e}/access-requests${r}`,{},!0)}async function Qz(e,t){return I(`/datasets/${e}/access-requests/${t}/approve`,{method:"POST"},!0)}async function Zz(e,t){return I(`/datasets/${e}/access-requests/${t}/deny`,{method:"POST"},!0)}async function eH(e,t){return I(`/datasets/${e}/invite`,{method:"POST",body:JSON.stringify({username:t})},!0)}async function tH(e){return I(`/datasets/${e}/collaborators`,{},!0)}async function rH(e,t){return I(`/admin/datasets/${e}/enrichment`,{method:"POST",body:JSON.stringify(t)},!0)}var Em;var To=A(()=>{rD();Ts();Em=/^\d{4}-\d{4}-\d{4}-\d{3}[\dX]$/});var qc;var aH=A(()=>{qc=["ci_check","enrichment_check","s3_public_read","repo_public","tag_protect","doi_create","update_metadata","update_readme","create_tag","create_release","upload_to_zenodo","publish_doi","version_doi","s3_lock","sync_nemar","notify_user"]});async function jc(e){return I(`/datasets/${e}/publish/request`,{method:"POST"},!0)}async function uH(e){return I(`/datasets/${e}/publish/status`,{},!0)}async function lH(e){return I(`/datasets/${e}/publish/resend`,{method:"POST"},!0)}async function dH(e){let t=e?`?status=${e}`:"";return I(`/admin/publish/requests${t}`,{},!0)}async function fH(e,t){return I(`/admin/publish/${e}/deny`,{method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify({reason:t})},!0)}function uIe(e,t=[]){if(e){let r=qc.indexOf(e);if(r>=0)return r+1}return Math.min(t.length+1,qc.length)}function lIe(e){if(!(e instanceof M))return!1;if(e.statusCode===0)return!0;if(e.statusCode===429)return!0;if(e.statusCode>=500&&e.statusCode<600)return!0;if(e.statusCode===403&&/repository has been locked/i.test(e.message))return!0;return!1}async function Mc(e,t=!1,r=!1,n=!1,i,s){let c,l,d=0,f=!1,m,p=t,g=[],y;function x(v,_,E,C){if(!s)return;s({step:v,stepIndex:uIe(v,_),stepTotal:qc.length,s3LockLocked:E,s3LockTotal:C,s3LockResumed:v==="s3_lock"&&f?!0:void 0})}for(let v=1;v<=5;v++)try{let _,E=!0;do{if(_=await I(`/admin/publish/${e}/approve`,{method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify({resume:E?p:!0,sandbox:r,s3_lock_continuation_token:c,s3_lock_total:l,skip_ci_check:n})},!0),E=!1,_.step_results)g.push(..._.step_results);if(_.s3_lock_total!==void 0)l=_.s3_lock_total;if(_.s3_lock_batch_count!==void 0)d+=_.s3_lock_batch_count;let C=_.step??_.step_results?.[_.step_results.length-1]?.step;if(C&&(C!==m||C==="s3_lock"))x(C,_.steps_completed??[],C==="s3_lock"?d:void 0,C==="s3_lock"?l:void 0),m=C;if(_.hasMore&&_.s3_lock_continuation_token!==void 0)c=_.s3_lock_continuation_token;else break}while(_.hasMore);if(g.length>0)_.step_results=cH(g);return _}catch(_){if(y=_,v===5||!lIe(_)){if(_ instanceof M&&g.length>0)_.stepResults=cH(g);throw _}let C=_;if(i?.({attempt:v,maxAttempts:5,delayMs:1e4,step:C.step,error:C.message}),await new Promise((D)=>setTimeout(D,1e4)),p=!0,c!==void 0)f=!0}throw y}function cH(e){let t=new Map;for(let r of e)t.set(r.step,r);return Array.from(t.values())}var gd=A(()=>{aH();Ts();gr()});function hH(e){oD=e}function aD(){return oD}function yd(e){if(oD)process.stderr.write(`${e}
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`)}var oD=!1;var gH={};qi(gH,{runCommand:()=>R});var{spawn:dIe}=globalThis.Bun;async function R(e,t={}){let r={...process.env,GIT_TERMINAL_PROMPT:"0",...t.env};for(let l of t.unsetEnv??[])delete r[l];let n=dIe({cmd:e,cwd:t.cwd,stdout:"pipe",stderr:"pipe",env:r}),i=!1,s;if(t.timeout)s=setTimeout(()=>{i=!0,n.kill()},t.timeout);if(aD()){let l=t.cwd?` (cwd=${t.cwd})`:"";yd(u.dim(`$ ${e.join(" ")}${l}`))}let o=await new Response(n.stdout).text(),a=await new Response(n.stderr).text(),c=await n.exited;if(s)clearTimeout(s);if(aD()){if(o.trim())yd(u.dim(o.trimEnd()));if(a.trim())yd(u.yellow(a.trimEnd()));yd(u.dim(`(exit ${c})`))}if(i)return{stdout:o,stderr:a||`Command timed out after ${Math.round(t.timeout/1000)}s`,exitCode:c??1};return{stdout:o,stderr:a,exitCode:c}}var Bt=A(()=>{Ke()});async function fIe(){try{let{exitCode:e,stderr:t}=await R(["ssh","-T","-o","BatchMode=yes","-o","ConnectTimeout=5","git@github.com"]),r=t.includes("successfully authenticated");if(!r)console.warn("SSH test to github.com failed:",{exitCode:e,stderr:t.trim().slice(0,500)});return{works:r,error:r?void 0:t.trim().slice(0,500)}}catch(e){let t=e instanceof Error?e.message:String(e);return console.warn("SSH test exception:",t),{works:!1,error:t}}}async function xd(){try{let{stdout:e,exitCode:t,stderr:r}=await R(["gh","auth","token"]);if(t!==0)return console.warn("gh CLI returned non-zero exit code:",t),console.warn("stderr:",r),{token:null,error:`gh auth token failed: ${r.trim()||"unknown error"}`};if(!e.trim())return console.warn("gh auth token returned empty output"),{token:null,error:"gh CLI returned empty token"};return{token:e.trim()}}catch(e){let t=e instanceof Error?e.message:String(e);if(console.error("Failed to get GitHub token from gh CLI:",t),t.includes("ENOENT")||t.includes("not found"))return{token:null,error:"gh CLI not installed (command not found)"};return{token:null,error:`gh CLI error: ${t}`}}}async function Rm(e){try{let{stdout:t,exitCode:r,stderr:n}=await R(["gh","api","user","--jq",".login"]);if(r!==0){if(n.includes("not logged in")||n.includes("auth login"))return{authenticated:!1,error:"gh CLI not authenticated. Run 'gh auth login' to authenticate."};return{authenticated:!1,error:`gh CLI error: ${n.trim()||"unknown error"}`}}let i=t.trim();if(!i)return{authenticated:!1,error:"gh CLI returned empty username"};if(e){let s=i.toLowerCase()===e.toLowerCase();return{authenticated:!0,username:i,matches:s,error:s?void 0:`gh CLI authenticated as '${i}', expected '${e}'`}}return{authenticated:!0,username:i}}catch(t){let r=t instanceof Error?t.message:String(t);if(r.includes("ENOENT")||r.includes("not found"))return{authenticated:!1,error:"gh CLI not installed. Install from https://cli.github.com/"};return{authenticated:!1,error:`Failed to verify gh CLI: ${r}`}}}async function Om(e){if(!/^[a-zA-Z0-9_.-]+\/[a-zA-Z0-9_.-]+$/.test(e))return{accepted:!1,error:`Invalid repository format: ${e}`};let{stdout:t,exitCode:r,stderr:n}=await R(["gh","api","/user/repository_invitations"]);if(r!==0){if(n.includes("not logged in")||n.includes("auth login"))return{accepted:!1,error:"gh CLI not authenticated. Run 'gh auth login' to authenticate."};if(n.includes("API rate limit")||n.includes("403"))return{accepted:!1,error:"GitHub API rate limit exceeded. Please try again in a few minutes."};if(n.includes("ENOENT")||n.includes("not found"))return{accepted:!1,error:"gh CLI not installed. Install from https://cli.github.com/"};return{accepted:!1,error:`Failed to list invitations: ${n.trim()||"unknown error"}`}}let i=null;try{i=JSON.parse(t||"[]").find((l)=>l.repository.full_name===e)?.id??null}catch(a){let c=a instanceof Error?a.message:String(a);return console.error("Failed to parse GitHub invitations response:",c),console.error(" Raw response (first 500 chars):",(t||"").slice(0,500)),{accepted:!1,error:`Failed to parse GitHub API response: ${c}`}}if(!i){let{exitCode:a}=await R(["gh","api",`/repos/${e}`,"--silent"]);if(a===0)return{accepted:!0,alreadyCollaborator:!0};return{accepted:!1,error:`No pending invitation found for ${e}. You may need to accept it manually via GitHub.`}}let{exitCode:s,stderr:o}=await R(["gh","api","--method","PATCH",`/user/repository_invitations/${i}`]);if(s!==0)return{accepted:!1,error:`Failed to accept invitation: ${o.trim()||"unknown error"}`};return{accepted:!0}}async function ti(e,t,r="origin"){let n=t;if(process.env.GH_TOKEN&&t.startsWith("git@github.com:")){let i=process.env.GH_TOKEN.trim();if(!i||/\s/.test(i))return{success:!1,error:"GH_TOKEN environment variable is set but appears malformed (empty or contains whitespace)"};n=`https://github.com/${t.replace("git@github.com:","")}`,await R(["git","config","credential.https://github.com.helper",`!printf 'username=x-access-token\\npassword=${i}'`],{cwd:e})}else if(t.startsWith("git@github.com:")){let i=t.replace("git@github.com:",""),s=await xd();if(s.token)n=`https://github.com/${i}`,await R(["git","config","credential.https://github.com.helper",`!printf 'username=x-access-token\\npassword=${s.token}'`],{cwd:e});else{let o=await fIe();if(o.works)n=t;else return{success:!1,error:`GitHub authentication not configured.
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gh CLI failed: ${s.error||"could not get token"}
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package/package.json
CHANGED