nemar-cli 0.10.18-dev.3451 → 0.10.18
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/index.js +4 -4
- package/package.json +1 -1
package/dist/index.js
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@@ -99,18 +99,18 @@ ${t}`,eIe,tIe,rIe=(e,t,r)=>{let n=r===""?"":`with ${r.trim()}() `,i=Q6e.bind(nul
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`)}var R2=!1;var{spawn:jJe}=globalThis.Bun;function Vl(e,t=[]){let r=e.replace(MJe,'("$1","<redacted>")');for(let n of t)if(n.length>=qJe)r=r.split(n).join("<redacted>");return r}function rw(e){let t=["AWS_SESSION_TOKEN","AWS_SECRET_ACCESS_KEY","AWS_ACCESS_KEY_ID"],r=new Set;for(let n of[process.env,e??{}])for(let i of t){let o=n[i];if(typeof o==="string"&&o.length>0)r.add(o)}return[...r]}async function Xte(e,t){let r=e.getReader(),n=new TextDecoder,i="";while(!0){let{done:o,value:s}=await r.read();if(o)break;if(s.byteLength===0)continue;t(),i+=n.decode(s,{stream:!0})}return i+n.decode()}async function k(e,t={}){let r={...process.env,GIT_TERMINAL_PROMPT:"0",...t.env};for(let b of t.unsetEnv??[])delete r[b];let n=jJe({cmd:e,cwd:t.cwd,...t.stdin===void 0?{}:{stdin:new TextEncoder().encode(t.stdin)},stdout:"pipe",stderr:"pipe",env:r}),i=!1,o,s,a=performance.now(),c=()=>{if(s!==void 0)clearTimeout(s),s=void 0},u=()=>{if(!t.onInactivityWarning)return;c(),s=setTimeout(()=>{s=void 0;try{t.onInactivityWarning?.(performance.now()-a)}catch{console.error("Could not display subprocess inactivity warning; the child result is unaffected.")}},t.inactivityWarningAfterMs??LJe)};if(u(),t.timeout)o=setTimeout(()=>{i=!0,c(),n.kill()},t.timeout);let d=tw()?[...rw(r),...t.redact??[]]:[];if(tw()){let b=t.cwd?` (cwd=${t.cwd})`:"";Ic(l.dim(Vl(`$ ${e.join(" ")}${b}`,d)))}let f=()=>{a=performance.now(),u()},m,p,g,h=n.exited.then((b)=>(c(),b));try{[m,p,g]=await Promise.all([Xte(n.stdout,f),Xte(n.stderr,f),h])}finally{if(c(),o)clearTimeout(o)}if(tw()){if(t.sensitiveOutput)Ic(l.dim("[sensitive subprocess output suppressed]"));else{if(m.trim())Ic(l.dim(Vl(m.trimEnd(),d)));if(p.trim())Ic(l.yellow(Vl(p.trimEnd(),d)))}Ic(l.dim(`(exit ${g})`))}if(i)return{stdout:m,stderr:p||`Command timed out after ${Math.round(t.timeout/1000)}s`,exitCode:g??1,timedOut:!0};return{stdout:m,stderr:p,exitCode:g,timedOut:!1}}var MJe,qJe=8,LJe=120000;var It=I(()=>{Ze();MJe=/\(\s*"((?:x-amz-)[^"]*|authorization|proxy-authorization)"\s*,\s*"[^"]*"\s*\)/gi});function UJe(){if(process.platform==="darwin")return"macos";if(process.platform==="win32")return"windows";return"linux"}function Qte(e,t=UJe()){return e.installInstructions[t]}function zJe(e){let t=e.match(/(\d+\.\d+(?:\.\d+)?)/);return t?t[1]:void 0}function HJe(){let e=Number(process.env.TEST_PROBE_TIMEOUT_MS);return Number.isFinite(e)&&e>0?e:VJe}async function ere(e){try{let{exitCode:t,stdout:r,timedOut:n}=await k(e.cmd,{timeout:HJe()});if(n)return{available:!1,timedOut:!0};if(t!==0)return{available:!1};return{available:!0,version:zJe(r)}}catch(t){let r=t instanceof Error?t.message:String(t);if(!r.includes("ENOENT")&&!r.includes("not found"))console.error(` Warning: ${e.name} check failed unexpectedly: ${r}`);return{available:!1}}}async function ph(){let e=Object.entries(Zte);return Promise.all(e.map(async([t,r])=>{let{available:n,version:i,timedOut:o}=await ere(r);return{key:t,name:r.name,purpose:r.purpose,required:r.required,available:n,version:i,timedOut:o,installInstruction:Qte(r)}}))}async function tre(){let t=(await ph()).filter((r)=>r.required&&!r.available);if(t.length===0)return[];console.warn(`
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Heads up: some tools NEMAR needs for uploading/validating aren't installed yet:`);for(let r of t)console.warn(` - ${r.name} (${r.purpose})`),console.warn(` Install: ${r.installInstruction}`);return console.warn("Run `nemar doctor` anytime to re-check. You can finish signup without them.\n"),t}async function Hl(e){let r=BJe[e].map((s)=>Zte[s]).filter(Boolean),n=await Promise.all(r.map(async(s)=>{let a=await ere(s);return{check:s,available:a.available,timedOut:a.timedOut}}));for(let s of n)if(s.timedOut&&s.check.required)console.warn(`Warning: ${s.check.name} did not respond to a version check in time; continuing anyway.`);let i=n.filter((s)=>!s.available&&!s.timedOut&&s.check.required).map((s)=>({tool:s.check.name,installInstruction:Qte(s.check)}));if(i.length===0)return;let o=[`
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Missing required tools:`];for(let s of i)o.push(` ${s.tool} not installed`),o.push(` Install: ${s.installInstruction}`);throw Error(o.join(`
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`))}var Zte,BJe,VJe=4000;var mh=I(()=>{It();Zte={git:{name:"git",purpose:"version control for dataset metadata",cmd:["git","--version"],required:!0,installInstructions:{macos:"brew install git (or install Xcode Command Line Tools)",linux:"sudo apt-get install git OR sudo dnf install git",windows:"winget install Git.Git (or https://git-scm.com/download/win)"}},"git-annex":{name:"git-annex",purpose:"large-file data transfer (upload/download)",cmd:["git-annex","version"],required:!0,installInstructions:{macos:"brew install git-annex",linux:"sudo apt-get install git-annex OR sudo dnf install git-annex",windows:"Download the installer from https://git-annex.branchable.com/install/Windows/"}},gh:{name:"GitHub CLI (gh)",purpose:"GitHub authentication + repository operations",cmd:["gh","--version"],required:!0,installInstructions:{macos:"brew install gh",linux:"See https://cli.github.com/manual/installation",windows:"winget install GitHub.cli (or: scoop install gh)"}},aws:{name:"AWS CLI",purpose:"S3 data upload/download",cmd:["aws","--version"],required:!0,installInstructions:{macos:"brew install awscli",linux:"pip install awscli OR sudo snap install aws-cli --classic",windows:"winget install Amazon.AWSCLI (or the MSI from https://aws.amazon.com/cli/)"}},deno:{name:"Deno",purpose:"BIDS validation",cmd:["deno","--version"],required:!0,installInstructions:{macos:"brew install deno (or: curl -fsSL https://deno.land/install.sh | sh)",linux:"curl -fsSL https://deno.land/install.sh | sh",windows:"winget install DenoLand.Deno (or: irm https://deno.land/install.ps1 | iex)"}}},BJe={upload:["git-annex","gh","aws","deno"],download:["gh"],clone:["git","gh"],push:["git-annex","gh"],publish:["gh","aws"],update:["git","gh"],release:["git","gh"]}});var nre;var rre=I(()=>{nre={name:"nemar-cli",packageManager:"bun@1.4.3",version:"0.10.18
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`))}var Zte,BJe,VJe=4000;var mh=I(()=>{It();Zte={git:{name:"git",purpose:"version control for dataset metadata",cmd:["git","--version"],required:!0,installInstructions:{macos:"brew install git (or install Xcode Command Line Tools)",linux:"sudo apt-get install git OR sudo dnf install git",windows:"winget install Git.Git (or https://git-scm.com/download/win)"}},"git-annex":{name:"git-annex",purpose:"large-file data transfer (upload/download)",cmd:["git-annex","version"],required:!0,installInstructions:{macos:"brew install git-annex",linux:"sudo apt-get install git-annex OR sudo dnf install git-annex",windows:"Download the installer from https://git-annex.branchable.com/install/Windows/"}},gh:{name:"GitHub CLI (gh)",purpose:"GitHub authentication + repository operations",cmd:["gh","--version"],required:!0,installInstructions:{macos:"brew install gh",linux:"See https://cli.github.com/manual/installation",windows:"winget install GitHub.cli (or: scoop install gh)"}},aws:{name:"AWS CLI",purpose:"S3 data upload/download",cmd:["aws","--version"],required:!0,installInstructions:{macos:"brew install awscli",linux:"pip install awscli OR sudo snap install aws-cli --classic",windows:"winget install Amazon.AWSCLI (or the MSI from https://aws.amazon.com/cli/)"}},deno:{name:"Deno",purpose:"BIDS validation",cmd:["deno","--version"],required:!0,installInstructions:{macos:"brew install deno (or: curl -fsSL https://deno.land/install.sh | sh)",linux:"curl -fsSL https://deno.land/install.sh | sh",windows:"winget install DenoLand.Deno (or: irm https://deno.land/install.ps1 | iex)"}}},BJe={upload:["git-annex","gh","aws","deno"],download:["gh"],clone:["git","gh"],push:["git-annex","gh"],publish:["gh","aws"],update:["git","gh"],release:["git","gh"]}});var nre;var rre=I(()=>{nre={name:"nemar-cli",packageManager:"bun@1.4.3",version:"0.10.18",description:"CLI for NEMAR (Neuroelectromagnetic Data Archive and Tools Resource) dataset management",type:"module",main:"dist/index.js",bin:{nemar:"dist/index.js"},scripts:{dev:"bun run src/index.ts",build:"bun build src/index.ts --outdir dist --target bun --minify && sed '1s|#!/usr/bin/env node|#!/usr/bin/env bun|' dist/index.js > dist/index.js.tmp && mv dist/index.js.tmp dist/index.js",test:"bun test",lint:"biome check src/","lint:scrub":"biome check scripts/scrub shared/identifier-scrub.ts test/scrub","test:scrub":"bun test --preload ./test/scrub/helpers/temp-dirs-preload.ts --path-ignore-patterns='__run_every_scrub_suite__' test/scrub test/identifier-scan.test.ts test/identifier-scrub.test.ts test/identifier-dates.test.ts test/identifier-fleet.test.ts","migrations:d1-check":"bun run scripts/d1-migration-check.ts","zarr:geometry-check":"bun run backend/scripts/zarr-geometry-conformance.ts","lint:fix":"biome check --fix src/",format:"biome format --write src/",typecheck:"tsc --noEmit && tsc --noEmit -p backend","generate-openapi":"bun run scripts/generate-openapi.ts",prepublishOnly:"bun run build",prepare:"husky",postinstall:"bun scripts/postinstall-check.mjs",deploy:"wrangler deploy",preview:"wrangler dev"},keywords:["nemar","bids","neuroimaging","eeg","emg","datalad","cli"],author:"NEMAR Team",license:"CC-BY-NC-ND-4.0",repository:{type:"git",url:"git+https://github.com/nemarOrg/nemar-cli.git"},bugs:{url:"https://github.com/nemarOrg/nemar-cli/issues"},homepage:"https://docs.nemar.org",engines:{bun:">=1.0.0"},files:["dist","scripts/postinstall-check.mjs","scripts/recover-datasets.json","scripts/withdrawn-datasets.json","README.md","LICENSE"],dependencies:{chalk:"^5.3.0",commander:"^12.1.0",conf:"^13.0.1",inquirer:"^9.2.15",ora:"^8.0.1",semver:"^7.8.5",zod:"^3.23.8"},"lint-staged":{"src/**/*.{ts,tsx}":["biome check --fix"],"backend/src/**/*.{ts,tsx}":["biome check --fix"]},devDependencies:{"@anthropic-ai/sdk":"^0.132.1","@asteasolutions/zod-to-openapi":"^7.3.4","@biomejs/biome":"1.9.4","@types/bun":"latest","@types/inquirer":"^9.0.7","@types/semver":"^7.8.0",ajv:"^8.20.0","ajv-formats":"^3.0.1",husky:"^9.1.7","lint-staged":"^16.3.2",typescript:"^5.5.4",wrangler:"^4.70.0",yaml:"^2.8.4"}}});var eo;var kf=I(()=>{rre();eo=nre.version});import{mkdirSync as WJe,readdirSync as KJe,unlinkSync as JJe,writeFileSync as YJe}from"fs";import{join as A2}from"path";function lre(){Cf=!0}function Gl(){return Cf}function ure(e,t=process.env){return e.includes("--debug")||t.NEMAR_DEBUG==="1"}function gh(e){cre=e,Zt(`Step: ${e}`)}function yh(){sre=!0}function dre(){return sre}function Qt(){are=!0}function fre(){return are}function Zt(e){if(Cf)process.stderr.write(`[debug] ${e}
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`}function pYe(e,t){let r;try{r=KJe(e).filter((i)=>i.startsWith("nemar-")&&i.endsWith(".log"))}catch(i){if(i.code!=="ENOENT")Zt(`could not list ${e} for log rotation: ${q(i)}`);return}r.sort();let n=r.length-t;for(let i=0;i<n;i++)try{JJe(A2(e,r[i]))}catch(o){if(o.code!=="ENOENT")Zt(`could not remove old log ${r[i]}: ${q(o)}`)}}function yre(){return hh}function bre(e,t){if(!Cf)return null;let r=A2(P2(),"logs");try{WJe(r,{recursive:!0})}catch(s){return hh=q(s),Zt(`could not create log directory ${r}: ${hh}`),null}let i=`nemar-${new Date().toISOString().replace(/[:.]/g,"-")}-${dYe(e)}.log`,o=A2(r,i);try{YJe(o,fYe(e,t),"utf8")}catch(s){return hh=q(s),Zt(`could not write log file ${o}: ${hh}`),null}return pYe(r,XJe),o}var XJe=10,ZJe=2048,Cf=!1,sre=!1,are=!1,cre,nw,iw,QJe,tYe,pre,rYe=32,nYe,iYe,oYe,sYe,ore,hh;var Qn=I(()=>{Jt();to();mh();kf();iw=[];QJe=new Set(["authorization","cookie","set-cookie","x-api-key"]);tYe=/^(api[_-]?key|apikey|password|token|secret|access[_-]?key(_id)?|secret[_-]?access[_-]?key|session|session[_-]?token|authorization|ssh[_-]?key|private[_-]?key|device[_-]?code)$/i,pre=/[a-zA-Z0-9._%+-]+@[a-zA-Z0-9.-]+\.[a-zA-Z]{2,}/g;nYe=/Bearer\s+[A-Za-z0-9\-._~+/=]+/gi,iYe=/\b(?:AKIA|ASIA)[0-9A-Z]{16}\b/g,oYe=/((?:aws_)?secret_access_key["']?\s*[:=]\s*["']?)[A-Za-z0-9/+=]{20,}/gi,sYe=/([?&])(X-Amz-Signature|X-Amz-Security-Token|X-Amz-Credential|Signature|AWSAccessKeyId)=[^&\s"']+/gi;ore=new Set(["-k","--key","--password","--api-key"])});import{chmodSync as mYe,copyFileSync as hYe,existsSync as I2,mkdirSync as gYe,statSync as yYe}from"fs";import{homedir as sw}from"os";import{join as Rf}from"path";function xYe(e){let t=e.trim().replace(/\/+$/,"");try{let r=new URL(t);return r.protocol=r.protocol.toLowerCase(),r.host=r.host.toLowerCase(),r.toString().replace(/\/+$/,"")}catch{return console.error(`[nemar] could not parse stored apiUrl ${JSON.stringify(e)}; leaving as-is`),t}}function P2(){return process.env.NEMAR_CONFIG_DIR||Rf(sw(),".config","nemar")}function vYe(e){if(process.env.NEMAR_CONFIG_DIR)return;let t=Rf(e,"config.json");if(I2(t))return;let r=[];if(process.platform==="darwin")r.push(Rf(sw(),"Library","Preferences","nemar-nodejs","config.json"));if(process.platform==="win32"){let n=process.env.APPDATA||Rf(sw(),"AppData","Roaming");r.push(Rf(n,"nemar-nodejs","config.json"))}r.push(Rf(sw(),".config","nemar-nodejs","config.json"));for(let n of r)if(I2(n))try{gYe(e,{recursive:!0}),hYe(n,t),console.error(`[nemar] Config migrated from ${n} to ${t}
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[nemar] You can safely remove the old file.`);return}catch(i){console.error(`[nemar] Failed to migrate config from ${n}:`,i,`
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[nemar] You can manually copy ${n} to ${t}`)}}function Ci(){let e=P2();if(bh&&xre===e)return bh;if(vYe(e),bh=new ew({projectName:"nemar",configFileMode:N2,schema:{activeAccount:{type:"string"},accounts:{type:"object"},apiKey:{type:"string"},apiUrl:{type:"string"},username:{type:"string"},email:{type:"string"},githubUsername:{type:"string"},sandboxCompleted:{type:"boolean"},sandboxDatasetId:{type:"string"}},cwd:e}),xre=e,!wre.has(e))wre.add(e),_Ye(bh.path),EYe(),SYe();return bh}function _Ye(e){if(process.platform==="win32")return;if(!I2(e))return;try{if((yYe(e).mode&511)!==N2)mYe(e,N2)}catch(t){console.error(`[nemar] could not secure config file permissions for ${e}:`,t)}}function EYe(){let e=Ci(),t=e.get("accounts");if(t&&Object.keys(t).length>0)return;let r=e.get("apiKey"),n=e.get("username");if(!r&&!n)return;try{let i=n||"default",o={};for(let s of DYe){let a=e.get(s);if(a!==void 0)o[s]=a}e.store={activeAccount:i,accounts:{[i]:o}}}catch(i){console.error("Config migration failed (legacy config preserved):",i)}}function SYe(){let e=Ci(),t=e.store,r=t.accounts,n=!1;if(r)for(let[o,s]of Object.entries(r)){let a=s?.apiUrl;if(!a)continue;if(bYe.has(xYe(a)))r[o]={...s,apiUrl:Af},console.error(`[nemar] migrated stored apiUrl for account "${o}": ${a} -> ${Af}`),n=!0}let i=t.apiUrl;if(r&&Object.keys(r).length>0&&i!==void 0){let{apiUrl:o,...s}=t;try{e.store=s,console.error(`[nemar] removed stale top-level apiUrl from config (was: ${i})`),n=!1}catch(a){console.error("API URL cleanup failed (config file unchanged):",a)}}if(n)try{e.store={...e.store,accounts:r}}catch(o){console.error("API URL migration failed (config file unchanged):",o)}}function xh(){return Ci().get("activeAccount")}function Nc(){return Ci().get("accounts")||{}}function Ft(){let e={apiUrl:Af},t=xh();if(!t)return e;return Nc()[t]||e}function er(e,t){let r=Ci(),n=r.get("activeAccount")||"default",i=r.get("accounts")||{};if(!i[n])i[n]={apiUrl:Af};i[n][e]=t,r.store={...r.store,accounts:i,activeAccount:n}}function wh(e){let t=xh();if(!t)return;let r=Nc();if(r[t])delete r[t][e],Ci().set("accounts",r)}function vre(){let e=Ci(),t=xh();if(!t){e.clear();return}let r=Nc();delete r[t];let n=Object.keys(r);if(n.length>0)e.store={...e.store,accounts:r,activeAccount:n[0]};else e.clear()}function _re(){Ci().clear()}function tt(){return!!Ft().apiKey}function j2(){return Ci().path}function vh(){let e=Nc(),t=xh();return Object.entries(e).map(([r,n])=>({key:r,username:n.username,email:n.email,githubUsername:n.githubUsername,active:r===t,keySource:n.keySource}))}function Dre(e){return e.username?.trim()||e.email}function $Ye(e){let t=e.trim().toLowerCase();if(!t)return;let r=Object.entries(Nc()).filter(([,n])=>n.email&&n.email.toLowerCase()===t).map(([n])=>n);if(r.length>1){Zt(`findAccountKeyByEmail: ${r.length} accounts share email ${t}: ${r.join(", ")}`);return}return r[0]}function Ere(e,t){let r=Ci(),n=Nc(),i;if(n[e])i=e;else if(t.email)i=$Ye(t.email);let o=i?n[i]:void 0,s={...o??{apiUrl:Af},...t};if(i&&i!==e)delete n[i];return n[e]=s,r.store={...r.store,accounts:n,activeAccount:e},{key:e,previous:o}}function Sre(e){let t=e.trim();if(!t)return"unchanged";let r=Ci(),n=xh();if(!n||n===t)return"unchanged";let i=Nc(),o=i[n];if(!o)return"unchanged";if(i[t])return"key_taken";return delete i[n],i[t]={...o,username:t},r.store={...r.store,accounts:i,activeAccount:t},"renamed"}function M2(e){let t=Ci(),r=Nc();if(r[e])return t.store={...t.store,activeAccount:e},r[e];for(let[n,i]of Object.entries(r))if(i.githubUsername===e)return t.store={...t.store,activeAccount:n},i;return null}var Af="https://
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[nemar] You can manually copy ${n} to ${t}`)}}function Ci(){let e=P2();if(bh&&xre===e)return bh;if(vYe(e),bh=new ew({projectName:"nemar",configFileMode:N2,schema:{activeAccount:{type:"string"},accounts:{type:"object"},apiKey:{type:"string"},apiUrl:{type:"string"},username:{type:"string"},email:{type:"string"},githubUsername:{type:"string"},sandboxCompleted:{type:"boolean"},sandboxDatasetId:{type:"string"}},cwd:e}),xre=e,!wre.has(e))wre.add(e),_Ye(bh.path),EYe(),SYe();return bh}function _Ye(e){if(process.platform==="win32")return;if(!I2(e))return;try{if((yYe(e).mode&511)!==N2)mYe(e,N2)}catch(t){console.error(`[nemar] could not secure config file permissions for ${e}:`,t)}}function EYe(){let e=Ci(),t=e.get("accounts");if(t&&Object.keys(t).length>0)return;let r=e.get("apiKey"),n=e.get("username");if(!r&&!n)return;try{let i=n||"default",o={};for(let s of DYe){let a=e.get(s);if(a!==void 0)o[s]=a}e.store={activeAccount:i,accounts:{[i]:o}}}catch(i){console.error("Config migration failed (legacy config preserved):",i)}}function SYe(){let e=Ci(),t=e.store,r=t.accounts,n=!1;if(r)for(let[o,s]of Object.entries(r)){let a=s?.apiUrl;if(!a)continue;if(bYe.has(xYe(a)))r[o]={...s,apiUrl:Af},console.error(`[nemar] migrated stored apiUrl for account "${o}": ${a} -> ${Af}`),n=!0}let i=t.apiUrl;if(r&&Object.keys(r).length>0&&i!==void 0){let{apiUrl:o,...s}=t;try{e.store=s,console.error(`[nemar] removed stale top-level apiUrl from config (was: ${i})`),n=!1}catch(a){console.error("API URL cleanup failed (config file unchanged):",a)}}if(n)try{e.store={...e.store,accounts:r}}catch(o){console.error("API URL migration failed (config file unchanged):",o)}}function xh(){return Ci().get("activeAccount")}function Nc(){return Ci().get("accounts")||{}}function Ft(){let e={apiUrl:Af},t=xh();if(!t)return e;return Nc()[t]||e}function er(e,t){let r=Ci(),n=r.get("activeAccount")||"default",i=r.get("accounts")||{};if(!i[n])i[n]={apiUrl:Af};i[n][e]=t,r.store={...r.store,accounts:i,activeAccount:n}}function wh(e){let t=xh();if(!t)return;let r=Nc();if(r[t])delete r[t][e],Ci().set("accounts",r)}function vre(){let e=Ci(),t=xh();if(!t){e.clear();return}let r=Nc();delete r[t];let n=Object.keys(r);if(n.length>0)e.store={...e.store,accounts:r,activeAccount:n[0]};else e.clear()}function _re(){Ci().clear()}function tt(){return!!Ft().apiKey}function j2(){return Ci().path}function vh(){let e=Nc(),t=xh();return Object.entries(e).map(([r,n])=>({key:r,username:n.username,email:n.email,githubUsername:n.githubUsername,active:r===t,keySource:n.keySource}))}function Dre(e){return e.username?.trim()||e.email}function $Ye(e){let t=e.trim().toLowerCase();if(!t)return;let r=Object.entries(Nc()).filter(([,n])=>n.email&&n.email.toLowerCase()===t).map(([n])=>n);if(r.length>1){Zt(`findAccountKeyByEmail: ${r.length} accounts share email ${t}: ${r.join(", ")}`);return}return r[0]}function Ere(e,t){let r=Ci(),n=Nc(),i;if(n[e])i=e;else if(t.email)i=$Ye(t.email);let o=i?n[i]:void 0,s={...o??{apiUrl:Af},...t};if(i&&i!==e)delete n[i];return n[e]=s,r.store={...r.store,accounts:n,activeAccount:e},{key:e,previous:o}}function Sre(e){let t=e.trim();if(!t)return"unchanged";let r=Ci(),n=xh();if(!n||n===t)return"unchanged";let i=Nc(),o=i[n];if(!o)return"unchanged";if(i[t])return"key_taken";return delete i[n],i[t]={...o,username:t},r.store={...r.store,accounts:i,activeAccount:t},"renamed"}function M2(e){let t=Ci(),r=Nc();if(r[e])return t.store={...t.store,activeAccount:e},r[e];for(let[n,i]of Object.entries(r))if(i.githubUsername===e)return t.store={...t.store,activeAccount:n},i;return null}var Af="https://api.nemar.org",N2=384,bYe,wYe,Fkt,bh=null,xre=null,wre,DYe;var to=I(()=>{Jte();On();kd();Qn();bYe=new Set(["https://api.osc.earth/nemar","https://nemar-api.neuromechanist.workers.dev","https://nemar-api-dev.shirazi-10f.workers.dev"]);wYe=K({field:_(),blocks:le(_()).optional(),set_on:le(_()).optional()}).passthrough(),Fkt=K({apiKey:_().optional(),apiUrl:_().url().default(Af),username:_().optional(),email:_().email().optional(),githubUsername:_().optional(),sandboxCompleted:je().optional(),sandboxDatasetId:_().optional(),dismissedNoticeIds:le(R()).optional(),serviceAccess:je().optional(),profileGaps:le(wYe).optional(),orcidVerified:je().optional(),role:_().optional(),accountKind:Cl.optional(),pendingEmailChange:_().email().optional()});wre=new Set;DYe=["apiKey","apiUrl","username","email","githubUsername","sandboxCompleted","sandboxDatasetId","dismissedNoticeIds"]});function aw(e){if($re)return;$re=!0;let t=l.yellow("\u2500".repeat(60)),r=l.yellow.bold("[MAINTENANCE]"),n=l.dim(`mode: ${e.mode}`),i=e.eta?`
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${l.dim(`eta: ${e.eta}`)}`:"";process.stderr.write(`${t}
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${r} ${e.message}
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`)}var $re=!1;var q2=I(()=>{Ze()});function cw(){if(process.env.TEST_API_URL)return process.env.TEST_API_URL;if(B2)return L2;return Ft().apiUrl||L2}async function j(e,t={},r=!1,n){let i=`${cw()}${e}`,o={"Content-Type":"application/json","X-CLI-Version":eo,...t.headers};if(r){let m=Ft();if(!m.apiKey&&r===!0)throw new V(401,"Not authenticated. 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j("/admin/notify",{method:"POST",body:JSON.stringify(e)},!0)}async function hne(){return j("/admin/summary/coverage",{},!0)}async function gne(e,t,r){return j("/admin/manifest/dispatch",{method:"POST",body:JSON.stringify({dataset_id:e,version:t,skip_canary:r?.skipCanary??!1})},!0)}async function Y2(e){return j("/admin/doctor/scan",{method:"POST",body:JSON.stringify({...e?.check&&{check:e.check},...e?.datasetId&&{dataset_id:e.datasetId}})},!0)}async function X2(e){return j("/admin/doctor/fix",{method:"POST",body:JSON.stringify({check:e.check,...e.datasetId&&{dataset_id:e.datasetId},...e.dryRun&&{dry_run:!0}})},!0)}async function yne(){return j("/admin/zarr-catalog/publish",{method:"POST"},!0)}async function bne(e){return j("/admin/neurobagel/regenerate",{method:"POST",body:JSON.stringify(e)},!0)}async function xne(){return j("/admin/neurobagel/status",{method:"GET"},!0)}async function wne(){return j("/admin/neurobagel/verify",{method:"POST",body:"{}"},!0)}async function vne(e){let t=new URLSearchParams;if(e?.limit!=null)t.set("limit",String(e.limit));let r=t.toString()?`?${t.toString()}`:"";return j(`/admin/datasets/zarr-fidelity-sweep${r}`,{method:"POST",headers:{"Content-Type":"application/json"}},!0)}async function _ne(e){let t=new URLSearchParams;if(e?.limit!=null)t.set("limit",String(e.limit));if(e?.apply)t.set("apply","1");let r=t.toString()?`?${t.toString()}`:"";return j(`/admin/imports/issue-triage${r}`,{method:"POST",headers:{"Content-Type":"application/json"}},!0)}async function Dne(e){let t=e?.apply?"?apply=1":"";return j(`/admin/imports/coverage-sweep${t}`,{method:"POST",headers:{"Content-Type":"application/json"}},!0)}async function Ene(e){let t=e?.apply?"?apply=1":"";return j(`/admin/imports/weekly-summary${t}`,{method:"POST",headers:{"Content-Type":"application/json"}},!0)}async function Sne(e){return j("/admin/users/backfill-names",{method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify({apply:e?.apply??!1,...e?.limit!=null?{limit:e.limit}:{}})},!0)}async function $ne(e){return j("/admin/users/backfill-usernames",{method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify({apply:e?.apply??!1,...e?.limit!=null?{limit:e.limit}:{}})},!0)}async function kne(){return j("/admin/users/duplicates",{},!0,MU)}async function Cne(e){return j(`/admin/users/${e}/clear-identity-conflict`,{method:"POST"},!0,qU)}async function Rne(e){let t=new URLSearchParams;if(e?.limit!=null)t.set("limit",String(e.limit));let r=t.toString()?`?${t.toString()}`:"";return j(`/admin/datasets/anonymity-sweep${r}`,{method:"POST",headers:{"Content-Type":"application/json"}},!0)}async function Ane(){return j("/admin/datasets/anonymity-sweep?reset=1",{method:"POST",headers:{"Content-Type":"application/json"}},!0)}async function dw(e){let t=new URLSearchParams;if(e.verdicts&&e.verdicts.length>0)t.set("verdict",e.verdicts.join(","));if(e.dataset)t.set("dataset",e.dataset);if(e.author)t.set("author",e.author);if(e.needsMe)t.set("needs_me","1");let r=t.toString()?`?${t.toString()}`:"";return j(`/admin/pr-reviews${r}`,{method:"GET"},!0)}async function Z2(e,t,r){let n=r?`?head=${encodeURIComponent(r)}`:"";return j(`/admin/pr-reviews/${encodeURIComponent(e)}/${t}${n}`,{method:"GET"},!0)}async function Q2(e,t){return j(`/admin/pr-reviews/${encodeURIComponent(e)}/${t}/start`,{method:"POST"},!0)}async function One(e){return j(`/admin/pr-review-authors/${encodeURIComponent(e)}`,{method:"GET"},!0)}async function Tne(e,t,r){return j(`/admin/pr-review-authors/${encodeURIComponent(e)}`,{method:"PUT",body:JSON.stringify(r?{mode:t,reason:r}:{mode:t})},!0)}async function Fne(e){return j(`/admin/pr-review-authors/${encodeURIComponent(e)}`,{method:"DELETE"},!0)}var Wl=I(()=>{km();Fd();Ks()});async function Wr(e,t){return j(`/datasets/${e}/upload-credentials`,{method:"POST",body:JSON.stringify({duration_seconds:t})},!0)}async function eC(e,t){return j(`/datasets/${e}/download-credentials`,{method:"POST",body:JSON.stringify({duration_seconds:t})},!0)}async function Pne(e){return j(`/admin/datasets/${e}/files`,{},!0)}async function Ine(e){let t,r=0,n=[],i=!0;while(i){let o=await j(`/admin/datasets/${e}/s3-lock`,{method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify({continuation_token:t})},!0);if(r+=o.locked,o.failed?.length)n.push(...o.failed);if(i=o.hasMore,t=o.continuation_token,i&&!t)throw new V(500,"S3 lock paginated response missing continuation_token; aborting to avoid infinite loop")}return{locked:r,failed:n}}var Ys=I(()=>{Ks();Jt()});async function pw(e){return j(`/datasets/${e}/ci/status`,{},!0)}async function Nne(e){return j(`/datasets/${e}/manifest`,{},!0)}async function mw(e,t){return j(`/datasets/${e}/manifest/${t}`,{},!0)}function jne(e){let t=e;if(!t.status)t.status="active";else if(!["active","archived","deleted"].includes(t.status))throw Error(`Invalid dataset status: ${t.status}`);if(!t.visibility)t.visibility="private";else if(!["public","private"].includes(t.visibility))throw Error(`Invalid dataset visibility: ${t.visibility}`);return t}async function jc(e={}){let t=new URLSearchParams;if(e.mine)t.set("mine","true");if(e.search)t.set("search",e.search);if(e.modality)t.set("modality",e.modality);if(e.author)t.set("author",e.author);if(e.task)t.set("task",e.task);if(e.license)t.set("license",e.license);if(e.hasDoi)t.set("has_doi","true");if(e.hasHed)t.set("has_hed","1");if(e.hasZarr)t.set("has_zarr","1");if(e.hasZarrVerified)t.set("has_zarr_verified","1");if(e.dataComplete)t.set("data_complete","1");if(e.recent)t.set("recent",String(e.recent));if(e.sort)t.set("sort",e.sort);if(e.limit!=null)t.set("limit",String(e.limit));if(e.offset!=null)t.set("offset",String(e.offset));if(e.owner)t.set("owner",e.owner);if(e.facets)for(let[i,o]of Object.entries(e.facets))t.set(i,o);if(e.includeUnknown)t.set("include_unknown","1");let r=t.toString()?`?${t.toString()}`:"",n=await j(`/datasets${r}`,{},e.mine?!0:"optional");return n.datasets=n.datasets.map(jne),n}async function Mne(e){return j(`/datasets/resolve/${e}`,{},"optional")}async function qne(){return j("/datasets/facets",{signal:AbortSignal.timeout(5000)},"optional",jy)}async function Lne(e,t={}){let r=new URLSearchParams({q:e});if(t.modality)r.set("modality",t.modality);if(t.limit)r.set("limit",String(t.limit));if(t.hasHed)r.set("has_hed","1");if(t.hasZarr)r.set("has_zarr","1");if(t.hasZarrVerified)r.set("has_zarr_verified","1");if(t.author)r.set("author",t.author);if(t.task)r.set("task",t.task);if(t.license)r.set("license",t.license);if(t.hasDoi)r.set("has_doi","true");if(t.dataComplete)r.set("data_complete","1");if(t.recent)r.set("recent",String(t.recent));if(t.facets)for(let[i,o]of Object.entries(t.facets))r.set(i,o);if(t.includeUnknown)r.set("include_unknown","1");return await j(`/datasets/search?${r.toString()}`,{},"optional",FU)}async function _r(e){let t=await j(`/datasets/${e}`,{},"optional");return jne(t.dataset)}async function Bne(e){return j(`/datasets/${e}/versions`,{},!0)}async function hw(e){return j("/datasets",{method:"POST",body:JSON.stringify(e)},!0)}async function Une(e,t){return j(`/datasets/${e}/attestation`,{method:"PUT",body:JSON.stringify(t)},!0)}async function gw(e){return j(`/datasets/${e}/finalize`,{method:"POST"},!0)}async function tC(e){return j(`/datasets/${e}/request-access`,{method:"POST"},!0)}async function zne(e,t){let r=t?`?status=${t}`:"";return j(`/datasets/${e}/access-requests${r}`,{},!0)}async function Vne(e,t){return j(`/datasets/${e}/access-requests/${t}/approve`,{method:"POST"},!0)}async function Hne(e,t){return j(`/datasets/${e}/access-requests/${t}/deny`,{method:"POST"},!0)}async function Gne(e,t){return j(`/datasets/${e}/invite`,{method:"POST",body:JSON.stringify({username:t})},!0)}async function Wne(e){return j(`/datasets/${e}/collaborators`,{},!0)}async function Kne(e,t){return j(`/admin/datasets/${e}/enrichment`,{method:"POST",body:JSON.stringify(t)},!0)}var fw;var Mc=I(()=>{Fd();Ks();fw=/^\d{4}-\d{4}-\d{4}-\d{3}[\dX]$/});var Qne=1e4;async function Ff(e,t={}){return j(`/datasets/${e}/publish/request`,t.anonymous?{method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify({anonymous:!0})}:{method:"POST"},!0)}async function Pf(e){return j(`/datasets/${e}/publish/status`,{},!0)}async function tie(e){return j(`/datasets/${e}/publish/resend`,{method:"POST"},!0)}async function rie(e){let t=e?`?status=${e}`:"";return j(`/admin/publish/requests${t}`,{},!0)}async function yw(e,t){return j(`/admin/publish/${e}/deny`,{method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify({reason:t})},!0)}async function bw(e){return j(`/admin/publish/${e}/identifier-screen`,{method:"POST"},!0)}function kYe(e,t=[]){if(e){let r=Wa.indexOf(e);if(r>=0)return r+1}return Math.min(t.length+1,Wa.length)}function CYe(e){if(!(e instanceof V))return!1;if(e.statusCode===0)return!0;if(e.statusCode===429)return!0;if(e.statusCode>=500&&e.statusCode<600)return!0;if(e.statusCode===403&&/repository has been locked/i.test(e.message))return!0;return!1}async function If(e,t=!1,r=!1,n=!1,i,o,s){let c=Qne,u,d,f=0,m=!1,p,g=t,h=[],b;function x(w,D,C,E){if(!o)return;o({step:w,stepIndex:kYe(w,D),stepTotal:Wa.length,s3LockLocked:C,s3LockTotal:E,s3LockResumed:w==="s3_lock"&&m?!0:void 0})}for(let w=1;w<=5;w++)try{let D,C=!0;do{if(D=await j(`/admin/publish/${e}/approve`,{method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify({resume:C?g:!0,sandbox:r,s3_lock_continuation_token:u,s3_lock_total:d,skip_ci_check:n,...s!==void 0?{acknowledge_identifier_screen:s}:{}})},!0),C=!1,D.step_results)h.push(...D.step_results);if(D.s3_lock_total!==void 0)d=D.s3_lock_total;if(D.s3_lock_batch_count!==void 0)f+=D.s3_lock_batch_count;let E=D.step??D.step_results?.[D.step_results.length-1]?.step;if(E&&(E!==p||E==="s3_lock"))x(E,D.steps_completed??[],E==="s3_lock"?f:void 0,E==="s3_lock"?d:void 0),p=E;if(D.hasMore&&D.s3_lock_continuation_token!==void 0)u=D.s3_lock_continuation_token;else break}while(D.hasMore);if(h.length>0)D.step_results=eie(h);return D}catch(D){if(b=D,w===5||!CYe(D)){if(D instanceof V&&h.length>0)D.stepResults=eie(h);throw D}let E=D;if(i?.({attempt:w,maxAttempts:5,delayMs:c,step:E.step,error:E.message}),await new Promise((A)=>setTimeout(A,c)),g=!0,u!==void 0)m=!0}throw b}function eie(e){let t=new Map;for(let r of e)t.set(r.step,r);return Array.from(t.values())}var Nf=I(()=>{eb();Ks();Jt()});function Die(e,t){return e.filter((r)=>r.visibility==="public").map((r)=>r.dataset_id).filter((r)=>r.startsWith("nm")||r.startsWith("on")).filter((r)=>r!=="nm099999"&&!Xs.has(r)).filter((r)=>t.prefix?r.startsWith(t.prefix):!0).sort()}var Xs;var _w=I(()=>{Xs=new Set(["nm000103","nm000104","nm000105","nm000106","nm000107"])});function Kr(e){return e.replace(PYe,(t)=>{if(t===`
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`)return"\\n";if(t==="\r")return"\\r";if(t==="\t")return"\\t";let r=t.codePointAt(0)??0;return r<=255?`\\x${r.toString(16).padStart(2,"0")}`:`\\u${r.toString(16).padStart(4,"0")}`})}function Dw(e,t=", "){return e.map(Kr).join(t)}var PYe,is=(e)=>Kr(e)===e;var jf=I(()=>{PYe=/[\p{Cc}\u2028\u2029\u202a-\u202e\u2066-\u2069]/gu});async function IYe(){try{let{exitCode:e,stderr:t}=await k(["ssh","-T","-o","BatchMode=yes","-o","ConnectTimeout=5","git@github.com"]),r=t.includes("successfully authenticated");if(!r)console.warn("SSH test to github.com failed:",{exitCode:e,stderr:t.trim().slice(0,500)});return{works:r,error:r?void 0:t.trim().slice(0,500)}}catch(e){let t=e instanceof Error?e.message:String(e);return console.warn("SSH test exception:",t),{works:!1,error:t}}}async function Kl(){try{let{stdout:e,exitCode:t,stderr:r}=await k(["gh","auth","token"],{sensitiveOutput:!0});if(t!==0)return console.warn("gh CLI returned non-zero exit code:",t),console.warn("stderr:",r),{token:null,error:`gh auth token failed: ${r.trim()||"unknown error"}`};if(!e.trim())return console.warn("gh auth token returned empty output"),{token:null,error:"gh CLI returned empty token"};return{token:e.trim()}}catch(e){let t=e instanceof Error?e.message:String(e);if(console.error("Failed to get GitHub token from gh CLI:",t),t.includes("ENOENT")||t.includes("not found"))return{token:null,error:"gh CLI not installed (command not found)"};return{token:null,error:`gh CLI error: ${t}`}}}async function Ew(e){try{let{stdout:t,exitCode:r,stderr:n}=await k(["gh","api","user","--jq",".login"]);if(r!==0){if(n.includes("not logged in")||n.includes("auth login"))return{authenticated:!1,error:"gh CLI not authenticated. Run 'gh auth login' to authenticate."};return{authenticated:!1,error:`gh CLI error: ${n.trim()||"unknown error"}`}}let i=t.trim();if(!i)return{authenticated:!1,error:"gh CLI returned empty username"};if(e){let o=i.toLowerCase()===e.toLowerCase();return{authenticated:!0,username:i,matches:o,error:o?void 0:`gh CLI authenticated as '${i}', expected '${e}'`}}return{authenticated:!0,username:i}}catch(t){let r=t instanceof Error?t.message:String(t);if(r.includes("ENOENT")||r.includes("not found"))return{authenticated:!1,error:"gh CLI not installed. Install from https://cli.github.com/"};return{authenticated:!1,error:`Failed to verify gh CLI: ${r}`}}}async function Sw(e){if(!/^[a-zA-Z0-9_.-]+\/[a-zA-Z0-9_.-]+$/.test(e))return{accepted:!1,error:`Invalid repository format: ${e}`};let{stdout:t,exitCode:r,stderr:n}=await k(["gh","api","/user/repository_invitations"]);if(r!==0){if(n.includes("not logged in")||n.includes("auth login"))return{accepted:!1,error:"gh CLI not authenticated. Run 'gh auth login' to authenticate."};if(n.includes("API rate limit")||n.includes("403"))return{accepted:!1,error:"GitHub API rate limit exceeded. Please try again in a few minutes."};if(n.includes("ENOENT")||n.includes("not found"))return{accepted:!1,error:"gh CLI not installed. Install from https://cli.github.com/"};return{accepted:!1,error:`Failed to list invitations: ${n.trim()||"unknown error"}`}}let i=null;try{i=JSON.parse(t||"[]").find((u)=>u.repository.full_name===e)?.id??null}catch(a){let c=a instanceof Error?a.message:String(a);return console.error("Failed to parse GitHub invitations response:",c),console.error(" Raw response (first 500 chars):",(t||"").slice(0,500)),{accepted:!1,error:`Failed to parse GitHub API response: ${c}`}}if(!i){let{exitCode:a}=await k(["gh","api",`/repos/${e}`,"--silent"]);if(a===0)return{accepted:!0,alreadyCollaborator:!0};return{accepted:!1,error:`No pending invitation found for ${e}. You may need to accept it manually via GitHub.`}}let{exitCode:o,stderr:s}=await k(["gh","api","--method","PATCH",`/user/repository_invitations/${i}`]);if(o!==0)return{accepted:!1,error:`Failed to accept invitation: ${s.trim()||"unknown error"}`};return{accepted:!0}}async function os(e,t,r="origin"){let n=t;if(process.env.GH_TOKEN&&t.startsWith("git@github.com:")){let i=process.env.GH_TOKEN.trim();if(!i||/\s/.test(i))return{success:!1,error:"GH_TOKEN environment variable is set but appears malformed (empty or contains whitespace)"};n=`https://github.com/${t.replace("git@github.com:","")}`,await k(["git","config","credential.https://github.com.helper",`!printf 'username=x-access-token\\npassword=${i}'`],{cwd:e,redact:[i]})}else if(t.startsWith("git@github.com:")){let i=t.replace("git@github.com:",""),o=await Kl();if(o.token)n=`https://github.com/${i}`,await k(["git","config","credential.https://github.com.helper",`!printf 'username=x-access-token\\npassword=${o.token}'`],{cwd:e,redact:[o.token]});else{let s=await IYe();if(s.works)n=t;else return{success:!1,error:`GitHub authentication not configured.
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@@ -1249,7 +1249,7 @@ ${u.slice(0,10).join(`
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`)}}}qy();Jt();function fpe(e){return e instanceof V&&e.statusCode===422&&e.rawBody?.status==="blocked"&&My(e.blockReason)}function ppe(e){let t=e.rawBody?.ci_url;return typeof t==="string"&&/^https:\/\/\S+$/.test(t)?t:void 0}function eO(e){return e==="bids_validation_in_progress"?"Request recorded: BIDS validation is still running.":"Request recorded: BIDS validation has not started yet."}function tO(e,t=!1){let r=`nemar dataset publish request ${e}${t?" --anonymous":""}`;return[" Your request is recorded. NEMAR re-checks it automatically and continues once validation passes.",` If you would rather not wait for that, check validation with: nemar dataset ci ${e}`,` Once it has passed, request again: ${r}`," If it says a request already exists, nothing more is needed."," If validation fails or a submission minimum fails, the request stays blocked and nothing is emailed:",` check nemar dataset ci ${e} or nemar dataset publish status ${e}.`]}Jt();to();async function T_(){let e=Ft().sandboxCompleted;if(e!==void 0)return{status:e?"completed":"not_completed"};try{let t=await xw();if(er("sandboxCompleted",t.sandbox_completed),t.sandbox_dataset_id)er("sandboxDatasetId",t.sandbox_dataset_id);return t.sandbox_completed?{status:"completed"}:{status:"not_completed"}}catch(t){return{status:"unknown",reason:q(t)}}}var rO=Me(Zw(),1);function F_(e){if(e!==e.trim())return null;let t=rO.default.parse(e);if(!t)return null;if(t.prerelease.length>0||t.build.length>0)return null;return{major:t.major,minor:t.minor,patch:t.patch}}function pu(e,t){let r=F_(e);if(!r)throw Error(`Invalid version: ${e}`);let n=rO.default.inc(`${r.major}.${r.minor}.${r.patch}`,t);if(!n)throw Error(`Invalid version: ${e}`);return n}function nO(e){return F_(e)!==null}Ze();Ri();RR();Ze();Jn();Wl();Jt();tp();Ov();jf();Ri();Lc();Iv();TR();tl();ru();import{existsSync as iO,mkdirSync as rlt,readFileSync as nlt,statSync as ilt,writeFileSync as mpe}from"fs";import{join as olt,resolve as oO}from"path";function hpe(e,t,r){if(!oo(r,"metadata_write")){if(t)try{let n=oO(e,".nemar"),i=oO(n,"metadata.json");if(!iO(i)){if(!iO(n))rlt(n,{recursive:!0});mpe(i,JSON.stringify(t,null,2))}let o=oO(e,".bidsignore"),s="";if(iO(o))s=nlt(o,"utf-8");if(!s.includes(".nemar/")){let a=s?`${s.trimEnd()}
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|
-
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qi=Y_.split(/\s+/);if(qi.length>=4)te.add(qi[0]),M.add(qi[2]),P.add(qi[3])}if(ge.add(Dpe(Se.path)),Qr.some((qi)=>qi.severity==="identifier"))N++,H.add(Y_);ap(u,Qr);for(let qi of new Set(Qr.map((ghe)=>ghe.kind)))W[qi]=(W[qi]??0)+1;T++}catch(Xe){if(b.has(Se)&&Xe instanceof mr&&Xe.status===404){O++,m[Spe]=(m[Spe]??0)+1;return}L++,p("edf",Xe)}});let ce=x.length-O,br=!1,Et=!1;if(w&&w.size!==0)try{let{text:Se,truncated:Xe}=await N_(e,w,e.limits.participantsBytes),Qr=Se.indexOf(`
|
|
1252
|
+
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J={edf_headers:{candidates:ce,oversize:0,selected:A.length-O,scanned:T},scans_tables:{candidates:D.length,oversize:0,selected:gr.length,scanned:Zr},json_files:{candidates:C.length,oversize:C.filter(qr).length,selected:Q.length,scanned:re},text_files:{candidates:E.length,oversize:E.filter(qr).length,selected:B.length,scanned:Z}},rt=new Set,si=(Se,Xe)=>{if(Xe.oversize>0)rt.add(`${Se}-oversize`);if(Xe.candidates-Xe.oversize>Xe.selected)rt.add(`${Se}-sampled`);if(Xe.scanned<Xe.selected)rt.add(`${Se}-unread`)};if(si("edf-headers",J.edf_headers),si("json",J.json_files),si("text",J.text_files),J.scans_tables.scanned<J.scans_tables.selected)rt.add("scans-unread");if(br)rt.add("participants-unread");if(Et)rt.add("participants-truncated");for(let Se of o.extraIncompleteReasons??[])rt.add(Se);let vs=[...rt].sort(),OO={findings:u,edfCount:ce,headerRead:T,unscreenedCount:f,incompleteReasons:vs},mhe=u.filter((Se)=>Se.severity==="identifier"),hhe=Object.entries(m).filter(([Se])=>!Se.startsWith("edf/")).reduce((Se,[,Xe])=>Se+Xe,0);return{id:t,version:r,scanned_at:new Date().toISOString(),manifest_source:i,status:Olt(OO),incomplete:!Ape(OO),incomplete_reasons:vs,files:{total:n.length,edf_bdf:ce,header_read:T,header_read_failed:L},sampling:J,read_failures:m,edf_bdf_files_flagged:N,distinct_patient_field_values:F.size,distinct_subjects_with_edf_bdf:ge.size,distinct_patient_code_subfield:te.size,distinct_patient_name_subfield:P.size,distinct_patient_birth_subfield:M.size,distinct_patient_field_values_in_flagged_files:H.size,findings_by_kind:aae(u),edf_bdf_files_by_kind:W,unscreened_formats:d.unscreened,side_reads_failed:hhe,finding_fields:[...new Set(mhe.map((Se)=>`${Se.kind}:${Se.field}`))].sort()}}Hf();Qn();kf();ru();var mu="--acknowledge-identifier-preflight",Blt=16,Ult="local:";function lO(e){let t=[],r=new Map,n=0,i=[""];while(i.length>0){let o=i.pop(),s;try{s=qlt(o===""?e:Fpe(e,o),{withFileTypes:!0})}catch{n++;continue}s.sort((c,u)=>c.name<u.name?-1:c.name>u.name?1:0);let a=[];for(let c of s){let u=c.name;if(o===""&&(u===".git"||u===".nemar"))continue;let d=o===""?u:`${o}/${u}`;if(c.isDirectory()){a.push(d);continue}if(u===".gitattributes")continue;let f=`${Ult}${t.length}`,m=Fpe(e,d),p=null;try{let g=Ppe(m);if(g.isFile())p=g.size,r.set(f,m);else if(g.isDirectory()&&!Mlt(m).isSymbolicLink()){a.push(d);continue}}catch{}t.push({path:d,size:p,url:f})}for(let c=a.length-1;c>=0;c--)i.push(a[c])}return{entries:t,readable:r,unlisted:n}}function zlt(e,t=new Map){return async(r,n,i)=>{let o=e.get(r.url);if(o===void 0)throw new mr("unreadable-entry");let s=t.get(o),a;try{a=await Llt(o,"r")}catch{throw new mr("unreadable-entry")}try{let c=r.size===null?n:Math.min(n,r.size),u=new Uint8Array(c),d=0;while(d<c){let{bytesRead:f}=await a.read(u,d,c-d,d);if(f===0)break;d+=f}if(d<i.minBytes)throw new mr("short-body");if(s)u.set(s.subarray(0,Math.min(d,s.length)),0);return u.subarray(0,d)}catch(c){if(c instanceof mr)throw c;throw new mr("unreadable-entry")}finally{await a.close().catch(()=>{return})}}}async function Ipe(e,t){let r=lO(e),n=Cpe({fileConcurrency:Blt,workerConcurrency:1,limits:{...kpe},readEntryHead:zlt(r.readable,t),githubToken:async()=>null,readVersionManifest:async()=>{throw new mr("unreadable-entry")},sleep:async()=>{return}}),i=await Tpe(n,"local",null,r.entries,"clone",{extraIncompleteReasons:r.unlisted>0?["tree-truncated"]:[]}),o={scanned_at:i.scanned_at,status:i.status,incomplete:i.incomplete,incomplete_reasons:i.incomplete_reasons,files:i.files,findings_by_kind:i.findings_by_kind,edf_bdf_files_flagged:i.edf_bdf_files_flagged,unscreened_formats:i.unscreened_formats,read_failures:i.read_failures};return HC(gae(bae(o)))}function q_(e){if(Hc(e.status)!=="acknowledge")return[];let t=new Set([e.status]);if(e.incomplete&&e.status!=="unchecked")t.add("unchecked");let r=Object.values(e.unscreened_formats).reduce((i,o)=>i+o,0),n=e.status==="not-screened"||e.status==="clean-edf-only-others-unscreened";if(r>0&&!n)t.add("not-screened");return[...t].sort()}var Npe=(e,t)=>e.length===t.length&&e.every((r,n)=>r===t[n]);function jpe(e,t){let r=e.split(",").map((i)=>i.trim()).filter((i)=>i!==""),n=lv;if(r.length===0||!r.every((i)=>n.includes(i)))throw new pp(`Allowed verdicts are ${n.join(", ")}. Direct identifiers cannot be acknowledged.`);return[...t??[],...r]}function Vlt(e,t){let r=Hc(e.status);if(r==="clear")return{action:"proceed",acknowledgedVia:null};if(r!=="acknowledge")return{action:"refuse"};if(t.acknowledge!==void 0){let n=[...new Set(t.acknowledge)].sort();return Npe(n,q_(e))?{action:"proceed",acknowledgedVia:"flag"}:{action:"stop",why:"acknowledgment-mismatch"}}if(t.dryRun)return{action:"preview"};if(t.no)return{action:"stop",why:"declined"};if(t.isTty)return{action:"prompt"};return{action:"stop",why:"acknowledgment-required"}}var Hlt={review:"the scanner found something a person should look at (the kinds are listed above)",unchecked:"the scanner could not read everything it should have (see Incomplete above)","not-screened":"some recordings are in formats the scanner cannot read, so their headers were not checked","clean-edf-only-others-unscreened":"the EDF/BDF headers are clean, but other recordings are in formats the scanner cannot read"},aO=(e)=>`${mu} ${e.join(",")}`;function cO(e){console.log(l.yellow(" This does not stop an upload, but it needs your explicit acknowledgment of:"));for(let t of e)console.log(l.yellow(` ${t}: ${Hlt[t]??"not clean"}.`));console.log(l.dim(" Your acknowledgment is recorded with your deposit attestation. NEMAR screens the dataset again when you request publication, and an administrator decides then."))}function Mpe(){console.log(),console.log(l.red(" Upload refused: the preflight found direct identifiers (a name, a birth date finer than the year, a record number, an age over 89, or an identifying column or key). Nothing was sent.")),console.log(l.red(" Remove them from the files (for EDF/BDF, the patient and recording fields of the header) and run the upload again.")),console.log(l.dim(` There is no override, and ${mu} does not apply. If this is a false positive, please report it, so the scanner is fixed for every dataset. Terms: ${$_}`))}function qpe(e){if(e instanceof av)return`report-${e.message}`;let t=e instanceof Error&&/^[A-Za-z]{1,40}$/.test(e.name)?e.name:"unknown",r=e?.code;return typeof r==="string"&&/^E[A-Z0-9]{1,20}$/.test(r)?`${t} ${r}`:t}function Lpe(e,t){e.fail("Identifier preflight: DID NOT FINISH"),console.log(l.red(` The preflight could not produce a verdict, so nothing was uploaded (${qpe(t)}).`)),console.log(l.dim(" Please report this: https://github.com/nemarOrg/nemar-cli/issues"))}function M_(e,t,r=""){let n=GC(t,null),i=`${n.headline}${r}`;if(n.tone==="ok")e.succeed(i);else if(n.tone==="stop")e.fail(i);else e.warn(i);for(let o of Gc({state:t.status,...n},2).slice(1))console.log(o)}function Bpe(e,t){try{return jt(xae({version:sv,scanner:`nemar-cli@${eo}`,scan:e,acknowledged_via:t}))}catch(r){return console.log(l.red(` The preflight's record did not fit the report contract (${qpe(r)}), so nothing was uploaded.`)),$e}}async function Upe(e,t,r=process.stdin.isTTY===!0,n){let i=S("Screening for identifiers on this machine (nothing is sent)...").start(),o=!1;try{o=Ppe(e).isDirectory()}catch{o=!1}if(!o)return i.fail("Identifier preflight: the dataset path is not a directory"),$e;let s=new Map((n?.items??[]).map((m)=>[m.path,m.after])),a;try{a=await Ipe(e,s)}catch(m){return Lpe(i,m),$e}M_(i,a);let c=q_(a),u=Vlt(a,{acknowledge:t.acknowledgeIdentifierPreflight,dryRun:t.dryRun,no:t.no,isTty:r}),d;switch(u.action){case"proceed":if(u.acknowledgedVia==="flag")console.log(l.dim(` Acknowledged with ${aO(c)}.`));else if(t.acknowledgeIdentifierPreflight!==void 0)console.log(l.dim(` Nothing to acknowledge; ${mu} was not needed.`));d=u.acknowledgedVia;break;case"preview":return cO(c),console.log(l.yellow(` A real upload stops here until you acknowledge it: answer the prompt, or pass ${aO(c)}.`)),console.log(),jt(null);case"prompt":{cO(c);let m=!1,p=()=>{console.log(l.red(`
|
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Upload cancelled. Nothing was sent.`)),Qt(),process.exit(130)};process.once("SIGINT",p);let g=setInterval(()=>{return},1000);try{({acknowledged:m}=await De.prompt([{type:"confirm",name:"acknowledged",message:"Upload anyway?",default:!1}]))}catch{m=!1}finally{clearInterval(g),process.off("SIGINT",p)}if(m!==!0)return console.log(l.red(" Upload cancelled. Nothing was sent.")),Qt(),$e;console.log(l.dim(" Acknowledged at the prompt.")),d="prompt";break}case"refuse":return Mpe(),Qt(),$e;case"stop":if(u.why==="acknowledgment-mismatch")console.log(l.red(` ${mu} must name exactly what was found, which is: ${c.join(",")}. It does not acknowledge this scan. Nothing was sent.`));else cO(c),console.log(l.red(u.why==="declined"?" Declined (--no). Nothing was sent.":` No terminal to ask at: run interactively, or pass ${aO(c)}. --yes does not acknowledge a finding. Nothing was sent.`));return Qt(),$e}let f=Bpe(a,d);if(f.status==="ok")console.log();return f}async function zpe(e,t){let r=S("Screening again, right before anything is sent...").start(),n;try{n=await Ipe(e)}catch(a){return Lpe(r,a),$e}let i=Hc(n.status);if(i!=="clear"&&i!=="acknowledge")return M_(r,n),Mpe(),Qt(),$e;let o=q_(t.scan),s=q_(n);if(!Npe(o,s))return M_(r,n),console.log(l.red(` The files changed since the preflight, and so did what it found (acknowledged: ${o.join(",")||"nothing"}; now: ${s.join(",")}). Nothing was sent. Run the upload again.`)),Qt(),$e;if(cv(n.findings_by_kind)!==cv(t.scan.findings_by_kind))M_(r,n," (screened again)");else r.succeed(`${GC(n,null).headline} (screened again)`);return Bpe(n,t.acknowledged_via)}var out=/\.(edf|bdf)$/i,Jpe=lo(".nemar","date-normalization"),sut=()=>({tracked:0,"nested-repository":0,ignored:0,"tracking-unknown":0,link:0,"not-writable":0,"other-filesystem":0,unverified:0});function aut(){return{items:[],left:sut()}}function cut(e){if(process.env.GIT_DIR||process.env.GIT_WORK_TREE)return!0;for(let t=e;;t=L_(t)){if(Gpe(lo(t,".git")))return!0;if(L_(t)===t)return!1}}var fO=(e)=>e.normalize("NFC").toLowerCase();async function uO(e,t,r){try{let n=await k(e,{cwd:t,...r===void 0?{}:{stdin:r}});if(!(n.exitCode===0||e.includes("check-ignore")&&n.exitCode===1))return null;return new Set(n.stdout.split("\x00").filter(Boolean).map(fO))}catch{return null}}async function lut(e,t){let r=`${t.join("\x00")}\x00`;if(cut(e)){let i=await uO(["git","ls-files","-z"],e),o=await uO(["git","check-ignore","-z","--stdin"],e,r);return i&&o?{tracked:i,ignored:o}:null}let n=null;try{if(n=Zlt(lo(iut(),"nemar-ignore-")),(await k(["git","init","-q","--bare",n],{cwd:e})).exitCode!==0)return null;let o=await uO(["git",`--git-dir=${n}`,`--work-tree=${e}`,"check-ignore","--no-index","-z","--stdin"],e,r);return o?{tracked:new Set,ignored:o}:null}catch{return null}finally{if(n!==null)try{yO(n,{recursive:!0,force:!0})}catch{}}}function pO(e){let t;try{t=gO(e,"r")}catch{return null}try{let r=new Uint8Array(wt),n=0;while(n<wt){let i=Qlt(t,r,n,wt-n,n);if(i===0)break;n+=i}return n===wt?r:null}catch{return null}finally{try{hO(t)}catch{}}}var Vpe=(e,t)=>e!==null&&e.length===t.length&&e.every((r,n)=>r===t[n]);function Hpe(e){try{return Wlt(e,dO.W_OK),!0}catch{return!1}}function uut(e,t,r){let n=t.split("/").slice(0,-1);for(let i=1;i<=n.length;i++){let o=n.slice(0,i).join("/"),s=r.get(o);if(s===void 0){s=Gpe(lo(e,o,".git"));try{s||=xs(lo(e,o,".git")).isSymbolicLink()}catch{}r.set(o,s)}if(s)return!0}return!1}async function Ype(e){let t=aut();try{await dut(e,t)}catch(r){Zt(`date normalization: planning stopped (${r instanceof Error?r.name:"unknown"})`)}return t}async function dut(e,t){let r=Kpe(e).dev,n=lO(e),i=[];for(let c of n.entries){if(!out.test(c.path))continue;let u=n.readable.get(c.url);if(u===void 0)continue;let d=pO(u);if(d===null)continue;try{let f=Yv(d);if(f.changed)i.push({path:u,rel:c.path,before:d,after:f.header})}catch(f){if(f instanceof sa)continue;t.left.unverified++,Zt(`date normalization: a header was not planned (${f instanceof Error?f.name:"unknown"})`)}}if(i.length===0)return;let o=await lut(e,i.map((c)=>c.rel)),s=new Map,a=typeof process.getuid==="function"?process.getuid():null;for(let c of i){if(o===null){t.left["tracking-unknown"]++;continue}if(o.tracked.has(fO(c.rel))){t.left.tracked++;continue}if(uut(e,c.rel,s)){t.left["nested-repository"]++;continue}if(o.ignored.has(fO(c.rel))){t.left.ignored++;continue}let u;try{u=xs(c.path)}catch{continue}if(u.isSymbolicLink()){t.left.link++;continue}if(!u.isFile())continue;if(u.dev!==r){t.left["other-filesystem"]++;continue}if(a!==null&&u.uid!==a||(u.mode&128)===0||!Hpe(c.path)||!Hpe(L_(c.path))){t.left["not-writable"]++;continue}t.items.push({path:c.path,rel:c.rel,dev:u.dev,ino:u.ino,size:u.size,mtimeMs:u.mtimeMs,mode:u.mode,gid:u.gid,before:c.before,after:c.after})}}var fut=/^\d+-[0-9a-f]{16}$/;function put(e){try{let t=lo(e,Jpe);for(let r of[lo(e,".nemar"),t])if(!xs(r).isDirectory())return;for(let r of eut(t))if(fut.test(r))yO(lo(t,r),{force:!0})}catch{}}function mO(e){for(let t of e)try{rut(t)}catch{}}function mut(e,t){let r=[],n=lo(e,Jpe);try{for(let i of[lo(e,".nemar"),n]){let o;try{o=xs(i)}catch{Xlt(i),r.push(i),o=xs(i)}if(!o.isDirectory()||o.dev!==t)return mO([...r].reverse()),null}return{dir:n,made:r}}catch{return mO([...r].reverse()),null}}function hut(e){try{let t=gO(e,"r");try{Wpe(t)}finally{hO(t)}}catch{}}function gut(e,t){let r=null;try{let n=(o)=>o.isFile()&&o.dev===e.dev&&o.ino===e.ino&&o.size===e.size&&o.mtimeMs===e.mtimeMs;if(!n(xs(e.path))||!Vpe(pO(e.path),e.before))return null;if(r=lo(t,`${process.pid}-${Glt(8).toString("hex")}`),Ylt(e.path,r,dO.COPYFILE_EXCL|dO.COPYFILE_FICLONE),xs(r).gid!==e.gid)Jlt(r,-1,e.gid);Klt(r,e.mode&4095);let i=gO(r,"r+");try{if(nut(i,e.after,0,wt,0)!==wt)return null;Wpe(i)}finally{hO(i)}if(xs(r).size!==e.size||!Vpe(pO(r),e.after))return null;if(!n(xs(e.path)))return null;return tut(r,e.path),r=null,hut(L_(e.path)),xs(e.path).mtimeMs}catch(n){return Zt(`date normalization: a header was not set (${n instanceof Error?n.name:"unknown"})`),null}finally{if(r!==null)try{yO(r,{force:!0})}catch{}}}function Xpe(e,t){let r={set:0,left:0,mtimes:new Map};if(put(e),t.items.length===0)return r;let n=null;try{n=mut(e,Kpe(e).dev)}catch{}if(n===null)return r.left=t.items.length,Zt("date normalization: no work directory, nothing set"),r;try{for(let i of t.items){let o=gut(i,n.dir);if(o===null){r.left++;continue}r.set++,r.mtimes.set(i.rel,o)}}finally{mO([n.dir,...[...n.made].reverse().filter((i)=>i!==n.dir)])}if(r.set>0)console.log(l.dim(` ${pae(r.set)}`));return r}Ze();Wi();Jn();import{existsSync as Rg,mkdirSync as Iut,readFileSync as Ag,writeFileSync as gme}from"fs";import{basename as Nut,resolve as hu}from"path";Mc();Jt();ri();Wi();import{existsSync as B_,readFileSync as bO,writeFileSync as Qpe}from"fs";import{resolve as U_}from"path";var xO=[{spdxId:"CC0-1.0",name:"CC0 1.0 Universal (Public Domain)",description:"No rights reserved. Anyone can use the data for any purpose.",url:"https://creativecommons.org/publicdomain/zero/1.0/",allowsResearchUse:!0},{spdxId:"PDDL-1.0",name:"Open Data Commons Public Domain Dedication and License (PDDL)",description:"Database-specific public domain dedication.",url:"https://opendatacommons.org/licenses/pddl/1-0/",allowsResearchUse:!0},{spdxId:"CC-BY-4.0",name:"Creative Commons Attribution 4.0 International",description:"Attribution required. Free for any use including commercial.",url:"https://creativecommons.org/licenses/by/4.0/",allowsResearchUse:!0},{spdxId:"CC-BY-SA-4.0",name:"Creative Commons Attribution-ShareAlike 4.0 International",description:"Attribution + share-alike required. Derivatives must use same license.",url:"https://creativecommons.org/licenses/by-sa/4.0/",allowsResearchUse:!0},{spdxId:"CC-BY-NC-4.0",name:"Creative Commons Attribution-NonCommercial 4.0 International",description:"Attribution required. Non-commercial use only.",url:"https://creativecommons.org/licenses/by-nc/4.0/",allowsResearchUse:!0},{spdxId:"CC-BY-NC-SA-4.0",name:"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International",description:"Attribution + non-commercial + share-alike required.",url:"https://creativecommons.org/licenses/by-nc-sa/4.0/",allowsResearchUse:!0},{spdxId:"ODC-By-1.0",name:"Open Data Commons Attribution License v1.0",description:"Database-specific attribution license.",url:"https://opendatacommons.org/licenses/by/1.0/",allowsResearchUse:!0},{spdxId:"ODbL-1.0",name:"Open Data Commons Open Database License v1.0",description:"Database attribution + share-alike. Produced works can be any license.",url:"https://opendatacommons.org/licenses/odbl/1.0/",allowsResearchUse:!0}],Zpe=new Set(["CC0-1.0","CC-BY-4.0","CC-BY-SA-4.0","CC-BY-NC-4.0","CC-BY-NC-SA-4.0","CC-BY-ND-4.0","CC-BY-NC-ND-4.0","PDDL-1.0","ODC-By-1.0","ODbL-1.0","MIT","Apache-2.0","GPL-2.0-only","GPL-2.0-or-later","GPL-3.0-only","GPL-3.0-or-later","LGPL-2.1-only","LGPL-2.1-or-later","LGPL-3.0-only","LGPL-3.0-or-later","BSD-2-Clause","BSD-3-Clause","ISC","Unlicense"]);function eme(e){let t=U_(e,"dataset_description.json");if(B_(t))try{let n=JSON.parse(bO(t,"utf-8"));if(typeof n.License==="string"&&n.License.trim())return{spdxId:n.License.trim(),source:"dataset_description"}}catch(n){if(n instanceof SyntaxError)console.warn(` Warning: dataset_description.json has invalid JSON: ${n.message}`);else console.warn(` Warning: Could not read dataset_description.json: ${n instanceof Error?n.message:String(n)}`)}let r=["LICENSE","LICENSE.txt","LICENSE.md","LICENCE","LICENCE.txt"];for(let n of r){let i=U_(e,n);if(B_(i)){try{let o=bO(i,"utf-8").toLowerCase();if(o.includes("cc0")||o.includes("public domain dedication"))return{spdxId:"CC0-1.0",source:"license_file"};if(o.includes("attribution-noncommercial-sharealike"))return{spdxId:"CC-BY-NC-SA-4.0",source:"license_file"};if(o.includes("attribution-noncommercial"))return{spdxId:"CC-BY-NC-4.0",source:"license_file"};if(o.includes("attribution-sharealike"))return{spdxId:"CC-BY-SA-4.0",source:"license_file"};if(o.includes("creativecommons")&&o.includes("attribution"))return{spdxId:"CC-BY-4.0",source:"license_file"};if(o.includes("open database license")||o.includes("odbl"))return{spdxId:"ODbL-1.0",source:"license_file"};if(o.includes("open data commons")&&o.includes("attribution"))return{spdxId:"ODC-By-1.0",source:"license_file"};if(o.includes("public domain dedication and license")||o.includes("pddl"))return{spdxId:"PDDL-1.0",source:"license_file"};if(o.includes("permission is hereby granted, free of charge")||o.includes("mit license"))return{spdxId:"MIT",source:"license_file"}}catch(o){console.warn(` Warning: Could not read ${n}: ${o instanceof Error?o.message:String(o)}`)}return{spdxId:void 0,source:"license_file"}}}return{spdxId:void 0,source:"none"}}async function wO(e){let t=xO.map((i)=>({name:`${i.spdxId.padEnd(22)} ${i.description}`,value:i.spdxId,short:i.spdxId}));t.push({name:"Other (enter SPDX ID manually)",value:"__custom__",short:"Custom"});let r=e?xO.find((i)=>i.spdxId===e)?.spdxId:void 0,{selected:n}=await De.prompt([{type:"list",name:"selected",message:"Select a license for this dataset:",choices:t,default:r,pageSize:t.length}]);if(n==="__custom__"){let{customId:i}=await De.prompt([{type:"input",name:"customId",message:"Enter SPDX license ID (e.g., MIT, Apache-2.0):",validate:(o)=>{if(!o.trim())return"License ID is required";return!0}}]);return i.trim()}return n}function tme(e){let t=e.toUpperCase().replace(/\s+/g,"-");if(Zpe.has(e))return!0;for(let r of Zpe)if(r.toUpperCase()===t)return!0;return!1}function yut(e){let t=xO.find((r)=>r.spdxId===e);if(t)return`${t.name}
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package/package.json
CHANGED
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@@ -1,7 +1,7 @@
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{
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2
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"name": "nemar-cli",
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3
3
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"packageManager": "bun@1.4.3",
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4
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-
"version": "0.10.18
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4
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+
"version": "0.10.18",
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5
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"description": "CLI for NEMAR (Neuroelectromagnetic Data Archive and Tools Resource) dataset management",
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6
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"type": "module",
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"main": "dist/index.js",
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