nebula-notebook-mcp 0.1.0 → 0.3.0

package/bin/nebula

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+#!/usr/bin/env bash
+# Extensionless launcher so `nebula` resolves via PATH (e.g. in Nebula's
+# built-in terminals, where this bin dir is prepended to PATH). npm installs
+# get the name via the package.json bin map instead.
+exec node "$(dirname "$0")/nebula.js" "$@"

package/bin/nebula.js

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+#!/usr/bin/env node
+// Agent-facing CLI for Nebula Notebook — thin shim over the compiled CLI.
+// Run `nebula --help` for the command list; requires NEBULA_URL or --url.
+await import('../dist/cli/index.js');

package/dist/cli/compute.d.ts

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+/**
+ * `nebula compute …` — scheduler-backed compute allocations (HPC clusters).
+ *
+ * Detection-gated: servers without a scheduler (laptops, plain workstations)
+ * report enabled=false and every other subcommand fails fast with a clear
+ * message. Same AXI conventions as the rest of the CLI: --json/--quiet,
+ * one hint line, `--wait` FOLLOWS the allocation internally (the agent never
+ * writes its own poll loop — the process exiting is the signal).
+ */
+export declare function cmdCompute(argv: string[]): Promise<number>;
+//# sourceMappingURL=compute.d.ts.map

package/dist/cli/compute.d.ts.map

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+{"version":3,"file":"compute.d.ts","sourceRoot":"","sources":["../../src/cli/compute.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AA+DH,wBAAsB,UAAU,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAuBhE"}

package/dist/cli/compute.js

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+/**
+ * `nebula compute …` — scheduler-backed compute allocations (HPC clusters).
+ *
+ * Detection-gated: servers without a scheduler (laptops, plain workstations)
+ * report enabled=false and every other subcommand fails fast with a clear
+ * message. Same AXI conventions as the rest of the CLI: --json/--quiet,
+ * one hint line, `--wait` FOLLOWS the allocation internally (the agent never
+ * writes its own poll loop — the process exiting is the signal).
+ */
+import { CliError, EXIT, makeClient, parse, parseIntFlag, printHint, printJson, requirePositional, resolveUrl, toCliError, } from './shared.js';
+const COMPUTE_HELP = `usage: nebula compute <status|queues|alloc|ls|use|cancel> …
+
+Scheduler-backed compute (HPC clusters). Optional: servers without a
+scheduler report "no scheduler on this server" — check status first.
+
+  compute status                     scheduler present? enabled?
+  compute queues                     partitions + QoS + idle CPUs/GPUs + backlog
+  compute alloc --partition P [...]  request an allocation
+      [--qos Q] [--cpus N] [--mem GB] [--gpus N] [--gpu-type T]
+      [--walltime H] [--name NAME] [--idle-timeout MIN] [--wait] [--max-wait S]
+      --idle-timeout MIN auto-ends the allocation after MIN minutes with no
+      kernel or terminal activity (the node's server exits itself) — a safety
+      net against forgotten allocations; recommended for agent-created ones.
+      --wait BLOCKS until the allocation is active (internal polling; run it
+      as a background shell task for long queue waits). Exit 1 on failure,
+      exit 3 if --max-wait (default 3600s) expires while still queued.
+  compute ls                         list allocations
+  compute use <alloc-id|name> <notebook-path>
+                                     bind the notebook's kernels to the
+                                     allocation's server (must be active);
+                                     after this, nebula run executes there
+  compute cancel <id>                cancel an allocation (frees the nodes)
+
+Etiquette: allocations consume real cluster resources — request modest sizes,
+cancel what you created when done, never cancel allocations you didn't create,
+and add --idle-timeout 60 as a safety net in case you forget.
+
+examples:
+  nebula compute queues
+  nebula compute alloc --partition gpu --gpus 1 --walltime 2 --idle-timeout 60 --wait
+  nebula compute use a1b2c3d4 analysis.ipynb
+  nebula compute cancel a1b2c3d4`;
+/** --wait polling: starts quick, backs off to ~5s (same philosophy as nebula run). */
+const POLL_START_MS = 1_000;
+const POLL_MAX_MS = 5_000;
+const TERMINAL_STATES = new Set(['ended', 'failed', 'cancelled']);
+function sleep(ms) {
+    return new Promise((resolve) => setTimeout(resolve, ms));
+}
+export async function cmdCompute(argv) {
+    const [sub, ...rest] = argv;
+    if (sub === undefined || sub === '--help' || sub === '-h') {
+        console.log(COMPUTE_HELP);
+        return sub === undefined ? EXIT.USAGE : EXIT.OK;
+    }
+    switch (sub) {
+        case 'status':
+            return computeStatus(rest);
+        case 'queues':
+            return computeQueues(rest);
+        case 'alloc':
+            return computeAlloc(rest);
+        case 'ls':
+            return computeLs(rest);
+        case 'use':
+            return computeUse(rest);
+        case 'cancel':
+            return computeCancel(rest);
+        default:
+            throw new CliError(`unknown compute subcommand: ${sub}`, EXIT.USAGE, "run 'nebula compute --help' for the list");
+    }
+}
+function noScheduler() {
+    return new CliError('no scheduler on this server — compute allocations are unavailable', EXIT.ERROR, 'kernels run directly on the server; check availability with: nebula compute status');
+}
+// =============================================================================
+// compute status
+// =============================================================================
+async function computeStatus(argv) {
+    const { values } = parse(argv);
+    if (values.help) {
+        console.log(COMPUTE_HELP);
+        return EXIT.OK;
+    }
+    const client = makeClient(resolveUrl(values.url));
+    const result = await client.computeStatus();
+    if (!result.success)
+        throw toCliError(result.error);
+    const { enabled, scheduler } = result.data;
+    if (values.json) {
+        printJson(result.data);
+        return EXIT.OK;
+    }
+    console.log(`enabled: ${enabled}`);
+    console.log(`scheduler: ${scheduler ?? '-'}`);
+    if (enabled) {
+        printHint('see partitions and load with: nebula compute queues', values);
+    }
+    else {
+        printHint('no scheduler here — notebooks execute directly on this server', values);
+    }
+    return EXIT.OK;
+}
+// =============================================================================
+// compute queues
+// =============================================================================
+function pad(s, w) {
+    return s.length >= w ? s : s + ' '.repeat(w - s.length);
+}
+function table(rows) {
+    if (rows.length === 0)
+        return [];
+    const widths = rows[0].map((_, col) => Math.max(...rows.map((r) => (r[col] ?? '').length)));
+    return rows.map((r) => r.map((cell, col) => pad(cell ?? '', widths[col])).join('  ').trimEnd());
+}
+async function computeQueues(argv) {
+    const { values } = parse(argv);
+    if (values.help) {
+        console.log(COMPUTE_HELP);
+        return EXIT.OK;
+    }
+    const client = makeClient(resolveUrl(values.url));
+    const result = await client.listPartitions();
+    if (!result.success)
+        throw toCliError(result.error);
+    const data = result.data;
+    if (!data.enabled)
+        throw noScheduler();
+    if (values.json) {
+        printJson(data);
+        return EXIT.OK;
+    }
+    const allowed = new Set(data.associations?.partitions ?? []);
+    const partitions = data.load?.partitions ?? [];
+    const rows = [
+        ['PARTITION', 'STATE', 'TIMELIMIT', 'CPUS idle/tot', 'GPUS idle/tot (type)', 'PENDING', 'RUNNING'],
+    ];
+    for (const p of partitions) {
+        rows.push([
+            p.name + (allowed.size > 0 && !allowed.has(p.name) ? ' *' : ''),
+            p.up ? 'up' : 'down',
+            p.timeLimit,
+            `${p.cpus.idle}/${p.cpus.total}`,
+            p.gpus ? `${p.gpus.idle}/${p.gpus.total} (${p.gpus.type})` : '-',
+            String(p.jobs.pending),
+            String(p.jobs.running),
+        ]);
+    }
+    for (const line of table(rows))
+        console.log(line);
+    if (allowed.size > 0 && partitions.some((p) => !allowed.has(p.name))) {
+        console.log('(* = you cannot submit to this partition)');
+    }
+    const qoses = data.load?.qoses ?? [];
+    if (qoses.length > 0) {
+        console.log('');
+        const qosRows = [['QOS', 'PRIORITY', 'MAX WALL', 'PREEMPTIBLE', 'PENDING', 'RUNNING']];
+        for (const q of qoses) {
+            qosRows.push([
+                q.name + (q.name === data.associations?.defaultQos ? ' (default)' : ''),
+                String(q.priority),
+                q.maxWall ?? '-',
+                q.preemptible ? 'yes' : 'no',
+                String(q.jobs.pending),
+                String(q.jobs.running),
+            ]);
+        }
+        for (const line of table(qosRows))
+            console.log(line);
+    }
+    printHint('request one with: nebula compute alloc --partition <P> [--wait]', values);
+    return EXIT.OK;
+}
+// =============================================================================
+// compute alloc
+// =============================================================================
+async function computeAlloc(argv) {
+    const { values } = parse(argv, {
+        partition: { type: 'string' },
+        qos: { type: 'string' },
+        cpus: { type: 'string' },
+        mem: { type: 'string' },
+        gpus: { type: 'string' },
+        'gpu-type': { type: 'string' },
+        walltime: { type: 'string' },
+        name: { type: 'string' },
+        'idle-timeout': { type: 'string' },
+        wait: { type: 'boolean' },
+        'max-wait': { type: 'string' },
+    });
+    if (values.help) {
+        console.log(COMPUTE_HELP);
+        return EXIT.OK;
+    }
+    const partition = typeof values.partition === 'string' ? values.partition : '';
+    if (!partition) {
+        throw new CliError('--partition is required', EXIT.USAGE, 'see available partitions with: nebula compute queues');
+    }
+    const spec = { partition };
+    if (typeof values.qos === 'string')
+        spec.qos = values.qos;
+    if (values.cpus !== undefined)
+        spec.cpus = parseIntFlag(values.cpus, '--cpus', 1);
+    if (values.mem !== undefined)
+        spec.memGb = parseIntFlag(values.mem, '--mem', 4);
+    if (values.gpus !== undefined)
+        spec.gpus = parseIntFlag(values.gpus, '--gpus', 0);
+    if (typeof values['gpu-type'] === 'string')
+        spec.gpuType = values['gpu-type'];
+    if (values.walltime !== undefined) {
+        const hours = Number(values.walltime);
+        if (Number.isNaN(hours) || hours <= 0) {
+            throw new CliError(`--walltime must be a positive number of hours, got "${String(values.walltime)}"`, EXIT.USAGE);
+        }
+        spec.walltimeMinutes = Math.round(hours * 60);
+    }
+    if (typeof values.name === 'string')
+        spec.jobName = values.name;
+    if (values['idle-timeout'] !== undefined) {
+        const minutes = parseIntFlag(values['idle-timeout'], '--idle-timeout', 60);
+        if (minutes <= 0) {
+            throw new CliError(`--idle-timeout must be a positive number of minutes, got "${String(values['idle-timeout'])}"`, EXIT.USAGE);
+        }
+        spec.idleTimeoutMinutes = minutes;
+    }
+    const maxWait = parseIntFlag(values['max-wait'], '--max-wait', 3600);
+    const client = makeClient(resolveUrl(values.url));
+    // Fail fast with a friendly message when the server has no scheduler.
+    const status = await client.computeStatus();
+    if (status.success && !status.data.enabled)
+        throw noScheduler();
+    const created = await client.createAllocation(spec);
+    if (!created.success)
+        throw toCliError(created.error);
+    let alloc = created.data;
+    if (!values.wait) {
+        if (values.json) {
+            printJson(alloc);
+            return EXIT.OK;
+        }
+        console.log(`allocation: ${alloc.id}`);
+        console.log(`state: ${alloc.state}`);
+        printHint(`follow with: nebula compute ls; when active: nebula compute use ${alloc.id} <notebook.ipynb>`, values);
+        return EXIT.OK;
+    }
+    // --wait: FOLLOW the allocation until active or terminal. Internal polling
+    // only — launch as a background shell task; process exit is the signal.
+    const deadline = maxWait <= 0 ? Number.POSITIVE_INFINITY : Date.now() + maxWait * 1000;
+    let pollMs = POLL_START_MS;
+    while (alloc.state !== 'active' && !TERMINAL_STATES.has(alloc.state) && Date.now() < deadline) {
+        await sleep(Math.min(pollMs, Math.max(0, deadline - Date.now())));
+        pollMs = Math.min(pollMs * 1.5, POLL_MAX_MS);
+        try {
+            const list = await client.listAllocations();
+            if (list.success) {
+                const found = list.data.find((a) => a.id === alloc.id);
+                if (found)
+                    alloc = found;
+            }
+        }
+        catch {
+            // transient network blip — keep following
+        }
+    }
+    if (values.json) {
+        printJson(alloc);
+        return alloc.state === 'active' ? EXIT.OK : TERMINAL_STATES.has(alloc.state) ? EXIT.ERROR : EXIT.RUNNING;
+    }
+    console.log(`allocation: ${alloc.id}`);
+    console.log(`state: ${alloc.state}`);
+    if (alloc.state === 'active') {
+        console.log(`server: ${alloc.serverId}`);
+        console.log(`node: ${alloc.nodes?.join(',') || '-'}`);
+        printHint(`bind a notebook to it with: nebula compute use ${alloc.id} <notebook.ipynb>`, values);
+        return EXIT.OK;
+    }
+    if (TERMINAL_STATES.has(alloc.state)) {
+        console.error(`error: allocation ${alloc.id} ${alloc.state}${alloc.reason ? ` (${alloc.reason})` : ''}`);
+        return EXIT.ERROR;
+    }
+    printHint(`still ${alloc.state} after ${maxWait}s (exit 3); keep following with: nebula compute ls`, values);
+    return EXIT.RUNNING;
+}
+// =============================================================================
+// compute ls
+// =============================================================================
+async function computeLs(argv) {
+    const { values } = parse(argv);
+    if (values.help) {
+        console.log(COMPUTE_HELP);
+        return EXIT.OK;
+    }
+    const client = makeClient(resolveUrl(values.url));
+    const result = await client.listAllocations();
+    if (!result.success)
+        throw toCliError(result.error);
+    const allocations = result.data;
+    if (values.json) {
+        printJson(allocations);
+        return EXIT.OK;
+    }
+    if (allocations.length === 0) {
+        console.log('(no allocations)');
+        printHint('request one with: nebula compute alloc --partition <P> --wait', values);
+        return EXIT.OK;
+    }
+    const rows = [['ID', 'STATE', 'PARTITION', 'QOS', 'CPUS', 'MEM', 'GPUS', 'NODE', 'NAME']];
+    for (const a of allocations) {
+        rows.push([
+            a.id,
+            a.state,
+            a.spec.partition,
+            a.spec.qos ?? '-',
+            String(a.spec.cpus),
+            `${a.spec.memGb}G`,
+            a.spec.gpus ? `${a.spec.gpus}${a.spec.gpuType ? ` (${a.spec.gpuType})` : ''}` : '-',
+            a.nodes?.join(',') || '-',
+            a.spec.jobName,
+        ]);
+    }
+    for (const line of table(rows))
+        console.log(line);
+    printHint('bind a notebook to an active one: nebula compute use <id> <notebook.ipynb>', values);
+    return EXIT.OK;
+}
+// =============================================================================
+// compute use
+// =============================================================================
+async function findAllocation(client, idOrName) {
+    const result = await client.listAllocations();
+    if (!result.success)
+        throw toCliError(result.error);
+    const allocations = result.data;
+    const found = allocations.find((a) => a.id === idOrName) ??
+        allocations.find((a) => a.spec.jobName === idOrName);
+    if (!found) {
+        throw new CliError(`allocation not found: ${idOrName}`, EXIT.ERROR, 'list allocations with: nebula compute ls');
+    }
+    return found;
+}
+async function computeUse(argv) {
+    const { values, positionals } = parse(argv, {
+        kernel: { type: 'string' },
+    });
+    if (values.help) {
+        console.log(COMPUTE_HELP);
+        return EXIT.OK;
+    }
+    const usage = 'nebula compute use <alloc-id|name> <notebook-path>';
+    const idOrName = requirePositional(positionals, 0, 'alloc-id|name', usage);
+    const nbPath = requirePositional(positionals, 1, 'notebook-path', usage);
+    const url = resolveUrl(values.url);
+    const client = makeClient(url, nbPath);
+    const alloc = await findAllocation(client, idOrName);
+    if (alloc.state !== 'active' || !alloc.serverId) {
+        throw new CliError(`allocation ${alloc.id} is not active (state: ${alloc.state}) — kernels need an active allocation`, EXIT.ERROR, alloc.state === 'pending' || alloc.state === 'running'
+            ? `it is still coming up; check with: nebula compute ls`
+            : `request a new one with: nebula compute alloc --partition ${alloc.spec.partition} --wait`);
+    }
+    const kernelName = typeof values.kernel === 'string' ? values.kernel : undefined;
+    const bound = await client.getOrCreateKernelForFile(nbPath, kernelName, alloc.serverId);
+    if (!bound.success)
+        throw toCliError(bound.error, nbPath);
+    if (values.json) {
+        printJson({
+            allocationId: alloc.id,
+            serverId: alloc.serverId,
+            sessionId: bound.data.sessionId,
+            kernelName: bound.data.kernelName,
+            path: nbPath,
+        });
+        return EXIT.OK;
+    }
+    console.log(`bound: ${nbPath} → allocation ${alloc.id} (server ${alloc.serverId})`);
+    console.log(`session: ${bound.data.sessionId} (${bound.data.kernelName})`);
+    printHint(`nebula run ${nbPath} <cell-id> now executes on the allocation; cancel it when done: nebula compute cancel ${alloc.id}`, values);
+    return EXIT.OK;
+}
+// =============================================================================
+// compute cancel
+// =============================================================================
+async function computeCancel(argv) {
+    const { values, positionals } = parse(argv);
+    if (values.help) {
+        console.log(COMPUTE_HELP);
+        return EXIT.OK;
+    }
+    const id = requirePositional(positionals, 0, 'id', 'nebula compute cancel <id>');
+    const client = makeClient(resolveUrl(values.url));
+    const result = await client.cancelAllocation(id);
+    if (!result.success) {
+        if (/not found/i.test(result.error ?? '')) {
+            throw new CliError(`allocation not found: ${id}`, EXIT.ERROR, 'list allocations with: nebula compute ls');
+        }
+        throw toCliError(result.error);
+    }
+    if (values.json) {
+        printJson({ cancelled: true, id });
+        return EXIT.OK;
+    }
+    console.log(`cancelled: ${id}`);
+    printHint('notebooks bound to it fall back to a new kernel on next use', values);
+    return EXIT.OK;
+}
+//# sourceMappingURL=compute.js.map

package/dist/cli/compute.js.map

@@ -0,0 +1 @@
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package/dist/cli/index.d.ts

@@ -0,0 +1,12 @@
+/**
+ * nebula — agent-facing CLI for Nebula Notebook.
+ *
+ * A thin layer over the shared NebulaClient / tools code (the same code the
+ * MCP server uses). Design follows AXI (https://axi.md): compact plain-text
+ * output, combined operations, one contextual hint per command, --json for
+ * raw output, distinct exit codes.
+ *
+ * Exit codes: 0 ok · 1 error · 2 usage · 7 kernel dead/not-found · 9 OCC conflict
+ */
+export {};
+//# sourceMappingURL=index.d.ts.map

package/dist/cli/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/cli/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG"}

package/dist/cli/index.js

@@ -0,0 +1,87 @@
+/**
+ * nebula — agent-facing CLI for Nebula Notebook.
+ *
+ * A thin layer over the shared NebulaClient / tools code (the same code the
+ * MCP server uses). Design follows AXI (https://axi.md): compact plain-text
+ * output, combined operations, one contextual hint per command, --json for
+ * raw output, distinct exit codes.
+ *
+ * Exit codes: 0 ok · 1 error · 2 usage · 7 kernel dead/not-found · 9 OCC conflict
+ */
+import { CliError, EXIT } from './shared.js';
+import { cmdNb } from './nb.js';
+import { cmdRun } from './run.js';
+import { cmdKernel } from './kernel.js';
+import { cmdSession } from './session.js';
+import { cmdCompute } from './compute.js';
+import { cmdSetupSkill } from './skill.js';
+const ROOT_HELP = `nebula — work with notebooks on a running Nebula server
+
+Server URL required: --url <url> on any command, or export NEBULA_URL.
+
+usage: nebula <command> …
+
+  nb read <path>                 list cells (--cells, --outputs, --full)
+  nb edit <path> <cell-id> …     update a cell (OCC-checked; conflict → exit 9)
+  nb insert <path> --index N …   insert a cell
+  nb delete <path> <cell-id>     delete a cell
+  nb search <path> <query>       search cell sources (--limit)
+  run <path> <cell-id>           execute a cell + print output tail (--tail)
+  kernel status|restart|interrupt <path>
+  session start|end <path>       hold/release the agent lock across invocations
+  compute status|queues|alloc|ls|use|cancel
+                                 cluster compute allocations (HPC; optional —
+                                 absent unless the server has a scheduler)
+  setup-skill                    install the Claude Code skill (for agents outside Nebula terminals)
+
+Every command accepts --json (raw output) and --quiet (no hint line).
+Run 'nebula <command> --help' for examples.`;
+async function main(argv) {
+    const [cmd, ...rest] = argv;
+    if (cmd === undefined || cmd === '--help' || cmd === '-h' || cmd === 'help') {
+        console.log(ROOT_HELP);
+        return EXIT.OK;
+    }
+    switch (cmd) {
+        case 'nb':
+            return cmdNb(rest);
+        case 'run':
+            return cmdRun(rest);
+        case 'kernel':
+            return cmdKernel(rest);
+        case 'session':
+            return cmdSession(rest);
+        case 'compute':
+            return cmdCompute(rest);
+        case 'setup-skill':
+            return cmdSetupSkill(rest);
+        default:
+            throw new CliError(`unknown command: ${cmd}`, EXIT.USAGE, "run 'nebula --help' for the command list");
+    }
+}
+/** Exit only after stdout/stderr are flushed (they can be async on pipes). */
+function finish(code) {
+    let pending = 2;
+    const done = () => {
+        pending -= 1;
+        if (pending === 0)
+            process.exit(code);
+    };
+    process.stdout.write('', done);
+    process.stderr.write('', done);
+}
+main(process.argv.slice(2))
+    .then(finish)
+    .catch((e) => {
+    if (e instanceof CliError) {
+        console.error(`error: ${e.message}`);
+        if (e.hintText)
+            console.error(`hint: ${e.hintText}`);
+        finish(e.code);
+    }
+    else {
+        console.error(`error: ${e instanceof Error ? e.message : String(e)}`);
+        finish(EXIT.ERROR);
+    }
+});
+//# sourceMappingURL=index.js.map

package/dist/cli/index.js.map

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package/dist/cli/kernel.d.ts

@@ -0,0 +1,8 @@
+/**
+ * `nebula kernel …` — kernel status / restart / interrupt for a notebook.
+ *
+ * Uses the shared NebulaClient kernel-session helpers (same logic as the
+ * MCP kernel tools, but addressed by notebook path per invocation).
+ */
+export declare function cmdKernel(argv: string[]): Promise<number>;
+//# sourceMappingURL=kernel.d.ts.map

package/dist/cli/kernel.d.ts.map

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