mulch-cli 0.1.0 → 0.2.1

package/README.md

@@ -1,4 +1,4 @@
-# Mulch — Growing Expertise for Coding Agents
+# Mulch — Let your agents grow 🌱
 
 Structured expertise files that accumulate over time, live in git, work with any agent, and run locally with zero dependencies.
 
@@ -6,10 +6,22 @@ Agents start every session from zero. The pattern your agent discovered yesterda
 
 **Mulch is a passive layer.** It does not contain an LLM. Agents use Mulch — Mulch does not use agents.
 
+## Install
+
+```bash
+npm install -g mulch-cli
+```
+
+Or use directly with npx — no install required:
+
+```bash
+npx mulch-cli <command>
+```
+
 ## Quick Start
 
 ```bash
-npx mulch-cli init                                    # Create .mulch/ in your project
+mulch init                                            # Create .mulch/ in your project
 mulch add database                                    # Add a domain
 mulch record database --type convention "Use WAL mode for SQLite"
 mulch record database --type failure \
@@ -51,15 +63,22 @@ Everything is git-tracked. Clone a repo and your agents immediately have the pro
 |---------|-------------|
 | `mulch init` | Initialize `.mulch/` in the current project |
 | `mulch add <domain>` | Add a new expertise domain |
-| `mulch record <domain> --type <type>` | Record an expertise entry |
+| `mulch record <domain> --type <type>` | Record an expertise record (`--tags`, `--force`, `--relates-to`, `--supersedes`) |
+| `mulch edit <domain> <id>` | Edit an existing record by ID or 1-based index |
+| `mulch delete <domain> <id>` | Delete a record by ID or 1-based index |
 | `mulch query [domain]` | Query expertise (use `--all` for all domains) |
-| `mulch prime [domain]` | Output AI-optimized expertise context (optionally scoped) |
-| `mulch search <query>` | Search records across domains (`--domain`, `--type` filters) |
+| `mulch prime [domains...]` | Output AI-optimized expertise context (multi-domain, `--context`, `--format`, `--export`) |
+| `mulch search [query]` | Search records across domains (`--domain`, `--type`, `--tag` filters) |
+| `mulch compact [domain]` | Analyze compaction candidates or apply a compaction (`--analyze`, `--apply`) |
 | `mulch status` | Show expertise freshness and counts |
 | `mulch validate` | Schema validation across all files |
-| `mulch setup <provider>` | Install provider-specific hooks |
+| `mulch doctor` | Run health checks on expertise records (`--fix` to auto-fix) |
+| `mulch setup [provider]` | Install provider-specific hooks (claude, cursor, codex, gemini, windsurf, aider) |
 | `mulch onboard` | Generate AGENTS.md/CLAUDE.md snippet |
-| `mulch prune` | Remove stale tactical entries |
+| `mulch prune` | Remove stale tactical/observational entries |
+| `mulch ready` | Show recently added or updated records (`--since`, `--domain`, `--limit`) |
+| `mulch sync` | Validate, stage, and commit `.mulch/` changes |
+| `mulch learn` | Show changed files and suggest domains for recording learnings |
 
 ## Record Types
 
@@ -69,8 +88,10 @@ Everything is git-tracked. Clone a repo and your agents immediately have the pro
 | `pattern` | name, description | Named patterns with optional file references |
 | `failure` | description, resolution | What went wrong and how to avoid it |
 | `decision` | title, rationale | Architectural decisions and their reasoning |
+| `reference` | name, description | Key files, endpoints, or resources worth remembering |
+| `guide` | name, description | Step-by-step procedures for recurring tasks |
 
-All records support optional `--classification` (foundational / tactical / observational) and evidence flags (`--evidence-commit`, `--evidence-issue`, `--evidence-file`).
+All records support optional `--classification` (foundational / tactical / observational), evidence flags (`--evidence-commit`, `--evidence-issue`, `--evidence-file`), `--tags`, `--relates-to`, and `--supersedes` for linking.
 
 ## Example Output
 

package/dist/cli.js

@@ -12,11 +12,18 @@ import { registerStatusCommand } from "./commands/status.js";
 import { registerValidateCommand } from "./commands/validate.js";
 import { registerPruneCommand } from "./commands/prune.js";
 import { registerSearchCommand } from "./commands/search.js";
+import { registerDoctorCommand } from "./commands/doctor.js";
+import { registerReadyCommand } from "./commands/ready.js";
+import { registerSyncCommand } from "./commands/sync.js";
+import { registerDeleteCommand } from "./commands/delete.js";
+import { registerLearnCommand } from "./commands/learn.js";
+import { registerCompactCommand } from "./commands/compact.js";
 const program = new Command();
 program
     .name("mulch")
-    .description("Growing Expertise for Coding Agents")
-    .version("0.1.0");
+    .description("Let your agents grow 🌱")
+    .version("0.2.1")
+    .option("--json", "output as structured JSON");
 registerInitCommand(program);
 registerAddCommand(program);
 registerRecordCommand(program);
@@ -29,5 +36,11 @@ registerStatusCommand(program);
 registerValidateCommand(program);
 registerPruneCommand(program);
 registerSearchCommand(program);
+registerDoctorCommand(program);
+registerReadyCommand(program);
+registerSyncCommand(program);
+registerDeleteCommand(program);
+registerLearnCommand(program);
+registerCompactCommand(program);
 program.parse();
 //# sourceMappingURL=cli.js.map

package/dist/cli.js.map

@@ -1 +1 @@
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package/dist/commands/add.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"add.d.ts","sourceRoot":"","sources":["../../src/commands/add.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAMpC,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,OAAO,GAAG,IAAI,CA+CzD"}

package/dist/commands/add.js

@@ -2,21 +2,33 @@ import { existsSync } from "node:fs";
 import chalk from "chalk";
 import { getMulchDir, readConfig, writeConfig, getExpertisePath } from "../utils/config.js";
 import { createExpertiseFile } from "../utils/expertise.js";
+import { outputJson, outputJsonError } from "../utils/json-output.js";
 export function registerAddCommand(program) {
     program
         .command("add")
         .argument("<domain>", "expertise domain to add")
         .description("Add a new expertise domain")
         .action(async (domain) => {
+        const jsonMode = program.opts().json === true;
         const mulchDir = getMulchDir();
         if (!existsSync(mulchDir)) {
-            console.error(chalk.red("No .mulch/ directory found. Run `mulch init` first."));
+            if (jsonMode) {
+                outputJsonError("add", "No .mulch/ directory found. Run `mulch init` first.");
+            }
+            else {
+                console.error(chalk.red("No .mulch/ directory found. Run `mulch init` first."));
+            }
             process.exitCode = 1;
             return;
         }
         const config = await readConfig();
         if (config.domains.includes(domain)) {
-            console.error(chalk.red(`Domain "${domain}" already exists.`));
+            if (jsonMode) {
+                outputJsonError("add", `Domain "${domain}" already exists.`);
+            }
+            else {
+                console.error(chalk.red(`Domain "${domain}" already exists.`));
+            }
             process.exitCode = 1;
             return;
         }
@@ -24,7 +36,12 @@ export function registerAddCommand(program) {
         await createExpertiseFile(expertisePath);
         config.domains.push(domain);
         await writeConfig(config);
-        console.log(chalk.green(`Added domain "${domain}".`));
+        if (jsonMode) {
+            outputJson({ success: true, command: "add", domain });
+        }
+        else {
+            console.log(chalk.green(`Added domain "${domain}".`));
+        }
     });
 }
 //# sourceMappingURL=add.js.map

package/dist/commands/add.js.map

@@ -1 +1 @@
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package/dist/commands/compact.d.ts

@@ -0,0 +1,3 @@
+import { Command } from "commander";
+export declare function registerCompactCommand(program: Command): void;
+//# sourceMappingURL=compact.d.ts.map

package/dist/commands/compact.d.ts.map

@@ -0,0 +1 @@
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package/dist/commands/compact.js

@@ -0,0 +1,364 @@
+import chalk from "chalk";
+import { readConfig, getExpertisePath } from "../utils/config.js";
+import { readExpertiseFile, writeExpertiseFile, generateRecordId, } from "../utils/expertise.js";
+import { recordSchema } from "../schemas/record-schema.js";
+import { outputJson, outputJsonError } from "../utils/json-output.js";
+import { getRecordSummary } from "../utils/format.js";
+import _Ajv from "ajv";
+const Ajv = _Ajv.default ?? _Ajv;
+function findCandidates(domain, records, now, shelfLife) {
+    // Group records by type
+    const byType = new Map();
+    for (let i = 0; i < records.length; i++) {
+        const r = records[i];
+        if (!byType.has(r.type)) {
+            byType.set(r.type, []);
+        }
+        byType.get(r.type).push({ index: i + 1, record: r });
+    }
+    const candidates = [];
+    for (const [type, group] of byType) {
+        if (group.length < 2)
+            continue;
+        // Include groups where at least one record is stale or the group is large (3+)
+        const hasStale = group.some((g) => {
+            if (g.record.classification === "foundational")
+                return false;
+            const ageMs = now.getTime() - new Date(g.record.recorded_at).getTime();
+            const ageDays = Math.floor(ageMs / (1000 * 60 * 60 * 24));
+            if (g.record.classification === "tactical")
+                return ageDays > shelfLife.tactical;
+            if (g.record.classification === "observational")
+                return ageDays > shelfLife.observational;
+            return false;
+        });
+        if (hasStale || group.length >= 3) {
+            candidates.push({
+                domain,
+                type,
+                records: group.map((g) => ({
+                    index: g.index,
+                    id: g.record.id,
+                    summary: getRecordSummary(g.record),
+                    recorded_at: g.record.recorded_at,
+                })),
+            });
+        }
+    }
+    return candidates;
+}
+function resolveRecordIndices(records, identifiers) {
+    const indices = [];
+    for (const id of identifiers) {
+        if (id.startsWith("mx-")) {
+            const found = records.findIndex((r) => r.id === id);
+            if (found === -1) {
+                throw new Error(`Record with ID "${id}" not found.`);
+            }
+            indices.push(found);
+        }
+        else {
+            const idx = parseInt(id, 10);
+            if (isNaN(idx) || idx < 1 || idx > records.length) {
+                throw new Error(`Invalid index "${id}". Must be 1-${records.length}.`);
+            }
+            indices.push(idx - 1);
+        }
+    }
+    return indices;
+}
+export function registerCompactCommand(program) {
+    program
+        .command("compact")
+        .argument("[domain]", "expertise domain (required for --apply)")
+        .description("Compact records: analyze candidates or apply a compaction")
+        .option("--analyze", "show compaction candidates")
+        .option("--apply", "apply a compaction (replace records with summary)")
+        .option("--records <ids>", "comma-separated record IDs or indices to compact")
+        .option("--type <type>", "record type for the replacement")
+        .option("--name <name>", "name for replacement (pattern/reference/guide)")
+        .option("--title <title>", "title for replacement (decision)")
+        .option("--description <description>", "description for replacement")
+        .option("--content <content>", "content for replacement (convention)")
+        .option("--resolution <resolution>", "resolution for replacement (failure)")
+        .option("--rationale <rationale>", "rationale for replacement (decision)")
+        .action(async (domain, options) => {
+        const jsonMode = program.opts().json === true;
+        if (options.analyze) {
+            await handleAnalyze(jsonMode);
+        }
+        else if (options.apply) {
+            if (!domain) {
+                const msg = "Domain is required for --apply.";
+                if (jsonMode) {
+                    outputJsonError("compact", msg);
+                }
+                else {
+                    console.error(chalk.red(`Error: ${msg}`));
+                }
+                process.exitCode = 1;
+                return;
+            }
+            await handleApply(domain, options, jsonMode);
+        }
+        else {
+            const msg = "Specify --analyze or --apply.";
+            if (jsonMode) {
+                outputJsonError("compact", msg);
+            }
+            else {
+                console.error(chalk.red(`Error: ${msg}`));
+            }
+            process.exitCode = 1;
+        }
+    });
+}
+async function handleAnalyze(jsonMode) {
+    const config = await readConfig();
+    const now = new Date();
+    const shelfLife = config.classification_defaults.shelf_life;
+    const allCandidates = [];
+    for (const domain of config.domains) {
+        const filePath = getExpertisePath(domain);
+        const records = await readExpertiseFile(filePath);
+        if (records.length < 2)
+            continue;
+        const candidates = findCandidates(domain, records, now, shelfLife);
+        allCandidates.push(...candidates);
+    }
+    if (jsonMode) {
+        outputJson({
+            success: true,
+            command: "compact",
+            action: "analyze",
+            candidates: allCandidates,
+        });
+        return;
+    }
+    if (allCandidates.length === 0) {
+        console.log(chalk.green("No compaction candidates found."));
+        return;
+    }
+    console.log(chalk.bold("Compaction candidates:\n"));
+    for (const c of allCandidates) {
+        console.log(chalk.cyan(`${c.domain}/${c.type}`) + ` (${c.records.length} records)`);
+        for (const r of c.records) {
+            const idLabel = r.id ? ` ${r.id}` : "";
+            console.log(`  #${r.index}${idLabel}: ${r.summary}`);
+        }
+        console.log();
+    }
+    console.log(chalk.dim("To compact, run: mulch compact <domain> --apply --records <ids> --type <type> [fields...]"));
+}
+async function handleApply(domain, options, jsonMode) {
+    const config = await readConfig();
+    if (!config.domains.includes(domain)) {
+        const msg = `Domain "${domain}" not found in config.`;
+        if (jsonMode) {
+            outputJsonError("compact", msg);
+        }
+        else {
+            console.error(chalk.red(`Error: ${msg}`));
+        }
+        process.exitCode = 1;
+        return;
+    }
+    if (typeof options.records !== "string") {
+        const msg = "--records is required for --apply.";
+        if (jsonMode) {
+            outputJsonError("compact", msg);
+        }
+        else {
+            console.error(chalk.red(`Error: ${msg}`));
+        }
+        process.exitCode = 1;
+        return;
+    }
+    const filePath = getExpertisePath(domain);
+    const records = await readExpertiseFile(filePath);
+    const identifiers = options.records.split(",").map((s) => s.trim()).filter(Boolean);
+    let indicesToRemove;
+    try {
+        indicesToRemove = resolveRecordIndices(records, identifiers);
+    }
+    catch (err) {
+        const msg = err.message;
+        if (jsonMode) {
+            outputJsonError("compact", msg);
+        }
+        else {
+            console.error(chalk.red(`Error: ${msg}`));
+        }
+        process.exitCode = 1;
+        return;
+    }
+    if (indicesToRemove.length < 2) {
+        const msg = "Compaction requires at least 2 records.";
+        if (jsonMode) {
+            outputJsonError("compact", msg);
+        }
+        else {
+            console.error(chalk.red(`Error: ${msg}`));
+        }
+        process.exitCode = 1;
+        return;
+    }
+    // Build replacement record
+    const recordType = options.type ?? records[indicesToRemove[0]].type;
+    const recordedAt = new Date().toISOString();
+    const compactedFrom = indicesToRemove.map((i) => records[i].id).filter(Boolean);
+    let replacement;
+    switch (recordType) {
+        case "convention": {
+            const content = options.content ?? options.description;
+            if (!content) {
+                const msg = "Replacement convention requires --content or --description.";
+                if (jsonMode) {
+                    outputJsonError("compact", msg);
+                }
+                else {
+                    console.error(chalk.red(`Error: ${msg}`));
+                }
+                process.exitCode = 1;
+                return;
+            }
+            replacement = { type: "convention", content, classification: "foundational", recorded_at: recordedAt };
+            break;
+        }
+        case "pattern": {
+            const name = options.name;
+            const description = options.description;
+            if (!name || !description) {
+                const msg = "Replacement pattern requires --name and --description.";
+                if (jsonMode) {
+                    outputJsonError("compact", msg);
+                }
+                else {
+                    console.error(chalk.red(`Error: ${msg}`));
+                }
+                process.exitCode = 1;
+                return;
+            }
+            replacement = { type: "pattern", name, description, classification: "foundational", recorded_at: recordedAt };
+            break;
+        }
+        case "failure": {
+            const description = options.description;
+            const resolution = options.resolution;
+            if (!description || !resolution) {
+                const msg = "Replacement failure requires --description and --resolution.";
+                if (jsonMode) {
+                    outputJsonError("compact", msg);
+                }
+                else {
+                    console.error(chalk.red(`Error: ${msg}`));
+                }
+                process.exitCode = 1;
+                return;
+            }
+            replacement = { type: "failure", description, resolution, classification: "foundational", recorded_at: recordedAt };
+            break;
+        }
+        case "decision": {
+            const title = options.title;
+            const rationale = options.rationale;
+            if (!title || !rationale) {
+                const msg = "Replacement decision requires --title and --rationale.";
+                if (jsonMode) {
+                    outputJsonError("compact", msg);
+                }
+                else {
+                    console.error(chalk.red(`Error: ${msg}`));
+                }
+                process.exitCode = 1;
+                return;
+            }
+            replacement = { type: "decision", title, rationale, classification: "foundational", recorded_at: recordedAt };
+            break;
+        }
+        case "reference": {
+            const name = options.name;
+            const description = options.description;
+            if (!name || !description) {
+                const msg = "Replacement reference requires --name and --description.";
+                if (jsonMode) {
+                    outputJsonError("compact", msg);
+                }
+                else {
+                    console.error(chalk.red(`Error: ${msg}`));
+                }
+                process.exitCode = 1;
+                return;
+            }
+            replacement = { type: "reference", name, description, classification: "foundational", recorded_at: recordedAt };
+            break;
+        }
+        case "guide": {
+            const name = options.name;
+            const description = options.description;
+            if (!name || !description) {
+                const msg = "Replacement guide requires --name and --description.";
+                if (jsonMode) {
+                    outputJsonError("compact", msg);
+                }
+                else {
+                    console.error(chalk.red(`Error: ${msg}`));
+                }
+                process.exitCode = 1;
+                return;
+            }
+            replacement = { type: "guide", name, description, classification: "foundational", recorded_at: recordedAt };
+            break;
+        }
+        default: {
+            const msg = `Unknown record type "${recordType}".`;
+            if (jsonMode) {
+                outputJsonError("compact", msg);
+            }
+            else {
+                console.error(chalk.red(`Error: ${msg}`));
+            }
+            process.exitCode = 1;
+            return;
+        }
+    }
+    // Add supersedes links to the compacted-from records
+    if (compactedFrom.length > 0) {
+        replacement.supersedes = compactedFrom;
+    }
+    // Validate replacement
+    const ajv = new Ajv();
+    const validate = ajv.compile(recordSchema);
+    replacement.id = generateRecordId(replacement);
+    if (!validate(replacement)) {
+        const errors = (validate.errors ?? []).map((err) => `${err.instancePath} ${err.message}`);
+        const msg = `Replacement record failed validation: ${errors.join("; ")}`;
+        if (jsonMode) {
+            outputJsonError("compact", msg);
+        }
+        else {
+            console.error(chalk.red(`Error: ${msg}`));
+        }
+        process.exitCode = 1;
+        return;
+    }
+    // Remove old records and append replacement
+    const removeSet = new Set(indicesToRemove);
+    const remaining = records.filter((_, i) => !removeSet.has(i));
+    remaining.push(replacement);
+    await writeExpertiseFile(filePath, remaining);
+    if (jsonMode) {
+        outputJson({
+            success: true,
+            command: "compact",
+            action: "applied",
+            domain,
+            removed: indicesToRemove.length,
+            replacement,
+        });
+    }
+    else {
+        console.log(chalk.green(`\u2714 Compacted ${indicesToRemove.length} ${recordType} records into 1 in ${domain}`));
+    }
+}
+//# sourceMappingURL=compact.js.map

package/dist/commands/compact.js.map

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package/dist/commands/delete.d.ts

@@ -0,0 +1,3 @@
+import { Command } from "commander";
+export declare function registerDeleteCommand(program: Command): void;
+//# sourceMappingURL=delete.d.ts.map

package/dist/commands/delete.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"delete.d.ts","sourceRoot":"","sources":["../../src/commands/delete.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAUpC,wBAAgB,qBAAqB,CAAC,OAAO,EAAE,OAAO,GAAG,IAAI,CAyH5D"}