monomind 1.6.0 → 1.6.1

package/packages/@monomind/cli/dist/src/commands/analyze.js

@@ -1,2048 +0,0 @@
-/**
- * CLI Analyze Command
- * Code analysis, diff classification, AST analysis, and change risk assessment
- *
- * Features:
- * - AST analysis using ruvector (tree-sitter) with graceful fallback
- * - Symbol extraction (functions, classes, variables, types)
- * - Cyclomatic complexity scoring
- * - Diff classification and risk assessment
- * - Graph boundaries using MinCut algorithm
- * - Module communities using Louvain algorithm
- * - Circular dependency detection
- *
- * github.com/nokhodian/monomind
- */
-import { output } from '../output.js';
-import { callMCPTool, MCPClientError } from '../mcp-client.js';
-import * as path from 'path';
-import * as fs from 'fs/promises';
-import { writeFile } from 'fs/promises';
-import { resolve } from 'path';
-import { execSync } from 'child_process';
-// Dynamic import for AST analyzer
-async function getASTAnalyzer() {
-    try {
-        return await import('../ruvector/ast-analyzer.js');
-    }
-    catch {
-        return null;
-    }
-}
-// Dynamic import for graph analyzer
-async function getGraphAnalyzer() {
-    try {
-        return await import('../ruvector/graph-analyzer.js');
-    }
-    catch {
-        return null;
-    }
-}
-// Diff subcommand
-const diffCommand = {
-    name: 'diff',
-    description: 'Analyze git diff for change risk assessment and classification',
-    options: [
-        {
-            name: 'risk',
-            short: 'r',
-            description: 'Show risk assessment',
-            type: 'boolean',
-            default: false,
-        },
-        {
-            name: 'classify',
-            short: 'c',
-            description: 'Classify change type',
-            type: 'boolean',
-            default: false,
-        },
-        {
-            name: 'reviewers',
-            description: 'Show recommended reviewers',
-            type: 'boolean',
-            default: false,
-        },
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format: text, json, table',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json', 'table'],
-        },
-        {
-            name: 'verbose',
-            short: 'v',
-            description: 'Show detailed file-level analysis',
-            type: 'boolean',
-            default: false,
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze diff --risk', description: 'Analyze current diff with risk assessment' },
-        { command: 'monomind analyze diff HEAD~1 --classify', description: 'Classify changes from last commit' },
-        { command: 'monomind analyze diff main..feature --format json', description: 'Compare branches with JSON output' },
-        { command: 'monomind analyze diff --reviewers', description: 'Get recommended reviewers for changes' },
-    ],
-    action: async (ctx) => {
-        const ref = ctx.args[0] || 'HEAD';
-        const showRisk = ctx.flags.risk;
-        const showClassify = ctx.flags.classify;
-        const showReviewers = ctx.flags.reviewers;
-        const formatType = ctx.flags.format || 'text';
-        const verbose = ctx.flags.verbose;
-        // If no specific flag, show all
-        const showAll = !showRisk && !showClassify && !showReviewers;
-        output.printInfo(`Analyzing diff: ${output.highlight(ref)}`);
-        try {
-            // Call MCP tool for diff analysis
-            const result = await callMCPTool('analyze_diff', {
-                ref,
-                includeFileRisks: verbose,
-                includeReviewers: showReviewers || showAll,
-            });
-            // JSON output
-            if (formatType === 'json') {
-                output.printJson(result);
-                return { success: true, data: result };
-            }
-            output.writeln();
-            // Summary box
-            const files = result.files || [];
-            const risk = result.risk || { overall: 'unknown', score: 0, breakdown: { fileCount: 0, totalChanges: 0, highRiskFiles: [], securityConcerns: [], breakingChanges: [], testCoverage: 'unknown' } };
-            const classification = result.classification || { category: 'unknown', confidence: 0, reasoning: '' };
-            output.printBox([
-                `Ref: ${result.ref || 'HEAD'}`,
-                `Files: ${files.length}`,
-                `Risk: ${getRiskDisplay(risk.overall)} (${risk.score}/100)`,
-                `Type: ${classification.category}${classification.subcategory ? ` (${classification.subcategory})` : ''}`,
-                ``,
-                result.summary || 'No summary available',
-            ].join('\n'), 'Diff Analysis');
-            // Risk assessment
-            if (showRisk || showAll) {
-                output.writeln();
-                output.writeln(output.bold('Risk Assessment'));
-                output.writeln(output.dim('-'.repeat(50)));
-                output.printTable({
-                    columns: [
-                        { key: 'metric', header: 'Metric', width: 25 },
-                        { key: 'value', header: 'Value', width: 30 },
-                    ],
-                    data: [
-                        { metric: 'Overall Risk', value: getRiskDisplay(risk.overall) },
-                        { metric: 'Risk Score', value: `${risk.score}/100` },
-                        { metric: 'Files Changed', value: risk.breakdown.fileCount },
-                        { metric: 'Total Lines Changed', value: risk.breakdown.totalChanges },
-                        { metric: 'Test Coverage', value: risk.breakdown.testCoverage },
-                    ],
-                });
-                // Security concerns
-                if (risk.breakdown.securityConcerns.length > 0) {
-                    output.writeln();
-                    output.writeln(output.bold(output.warning('Security Concerns')));
-                    output.printList(risk.breakdown.securityConcerns.map(c => output.warning(c)));
-                }
-                // Breaking changes
-                if (risk.breakdown.breakingChanges.length > 0) {
-                    output.writeln();
-                    output.writeln(output.bold(output.error('Potential Breaking Changes')));
-                    output.printList(risk.breakdown.breakingChanges.map(c => output.error(c)));
-                }
-                // High risk files
-                if (risk.breakdown.highRiskFiles.length > 0) {
-                    output.writeln();
-                    output.writeln(output.bold('High Risk Files'));
-                    output.printList(risk.breakdown.highRiskFiles.map(f => output.warning(f)));
-                }
-            }
-            // Classification
-            if (showClassify || showAll) {
-                output.writeln();
-                output.writeln(output.bold('Classification'));
-                output.writeln(output.dim('-'.repeat(50)));
-                output.printTable({
-                    columns: [
-                        { key: 'field', header: 'Field', width: 15 },
-                        { key: 'value', header: 'Value', width: 40 },
-                    ],
-                    data: [
-                        { field: 'Category', value: classification.category },
-                        { field: 'Subcategory', value: classification.subcategory || '-' },
-                        { field: 'Confidence', value: `${(classification.confidence * 100).toFixed(0)}%` },
-                    ],
-                });
-                output.writeln();
-                output.writeln(output.dim(`Reasoning: ${classification.reasoning}`));
-            }
-            // Reviewers
-            if (showReviewers || showAll) {
-                output.writeln();
-                output.writeln(output.bold('Recommended Reviewers'));
-                output.writeln(output.dim('-'.repeat(50)));
-                const reviewers = result.recommendedReviewers || [];
-                if (reviewers.length > 0) {
-                    output.printNumberedList(reviewers.map(r => output.highlight(r)));
-                }
-                else {
-                    output.writeln(output.dim('No specific reviewers recommended'));
-                }
-            }
-            // Verbose file-level details
-            if (verbose && result.fileRisks) {
-                output.writeln();
-                output.writeln(output.bold('File-Level Analysis'));
-                output.writeln(output.dim('-'.repeat(50)));
-                output.printTable({
-                    columns: [
-                        { key: 'path', header: 'File', width: 40 },
-                        { key: 'risk', header: 'Risk', width: 12, format: (v) => getRiskDisplay(String(v)) },
-                        { key: 'score', header: 'Score', width: 8, align: 'right' },
-                        { key: 'reasons', header: 'Reasons', width: 30, format: (v) => {
-                                const reasons = v;
-                                return reasons.slice(0, 2).join('; ');
-                            } },
-                    ],
-                    data: result.fileRisks,
-                });
-            }
-            // Files changed table
-            if (formatType === 'table' || showAll) {
-                output.writeln();
-                output.writeln(output.bold('Files Changed'));
-                output.writeln(output.dim('-'.repeat(50)));
-                output.printTable({
-                    columns: [
-                        { key: 'status', header: 'Status', width: 10, format: (v) => getStatusDisplay(String(v)) },
-                        { key: 'path', header: 'File', width: 45 },
-                        { key: 'additions', header: '+', width: 8, align: 'right', format: (v) => output.success(`+${v}`) },
-                        { key: 'deletions', header: '-', width: 8, align: 'right', format: (v) => output.error(`-${v}`) },
-                    ],
-                    data: files.slice(0, 20),
-                });
-                if (files.length > 20) {
-                    output.writeln(output.dim(`  ... and ${files.length - 20} more files`));
-                }
-            }
-            return { success: true, data: result };
-        }
-        catch (error) {
-            if (error instanceof MCPClientError) {
-                output.printError(`Diff analysis failed: ${error.message}`);
-            }
-            else {
-                output.printError(`Unexpected error: ${String(error)}`);
-            }
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-// Code subcommand (placeholder for future code analysis)
-const codeCommand = {
-    name: 'code',
-    description: 'Static code analysis and quality assessment',
-    options: [
-        { name: 'path', short: 'p', type: 'string', description: 'Path to analyze', default: '.' },
-        { name: 'type', short: 't', type: 'string', description: 'Analysis type: quality, complexity, security', default: 'quality' },
-        { name: 'format', short: 'f', type: 'string', description: 'Output format: text, json', default: 'text' },
-    ],
-    examples: [
-        { command: 'monomind analyze code -p ./src', description: 'Analyze source directory' },
-        { command: 'monomind analyze code --type complexity', description: 'Run complexity analysis' },
-    ],
-    action: async (ctx) => {
-        const targetPath = resolve(ctx.flags.path || '.');
-        const analysisType = ctx.flags.type || 'quality';
-        const formatJson = ctx.flags.format === 'json';
-        output.writeln();
-        output.writeln(output.bold('Code Analysis'));
-        output.writeln(output.dim('-'.repeat(50)));
-        const spinner = output.createSpinner({ text: `Analyzing ${targetPath}...`, spinner: 'dots' });
-        spinner.start();
-        try {
-            const files = await scanSourceFiles(targetPath);
-            if (files.length === 0) {
-                spinner.stop();
-                output.printWarning('No source files found');
-                return { success: true };
-            }
-            const fileStats = [];
-            for (const filePath of files) {
-                const content = await fs.readFile(filePath, 'utf-8');
-                const lines = content.split('\n');
-                const nonEmpty = lines.filter(l => l.trim().length > 0 && !/^\s*(\/\/|\/\*|\*\s|#)/.test(l)).length;
-                const todos = (content.match(/\b(TODO|FIXME|HACK|XXX)\b/gi) || []).length;
-                const fns = (content.match(/(?:export\s+)?(?:async\s+)?function\s+\w+|(?:const|let|var)\s+\w+\s*=\s*(?:async\s+)?\([^)]*\)\s*=>/g) || []).length;
-                const imps = (content.match(/^import\s+/gm) || []).length + (content.match(/require\s*\(/g) || []).length;
-                let maxNesting = 0;
-                let nesting = 0;
-                for (const line of lines) {
-                    nesting += (line.match(/\{/g) || []).length;
-                    nesting -= (line.match(/\}/g) || []).length;
-                    if (nesting > maxNesting)
-                        maxNesting = nesting;
-                }
-                const securityIssues = [];
-                if (/\beval\s*\(/.test(content))
-                    securityIssues.push('eval()');
-                if (/\bexec\s*\(/.test(content))
-                    securityIssues.push('exec()');
-                if (/\.innerHTML\s*=/.test(content))
-                    securityIssues.push('innerHTML');
-                if (/dangerouslySetInnerHTML/.test(content))
-                    securityIssues.push('dangerouslySetInnerHTML');
-                if (/['"](?:password|secret|api[_-]?key|token)\s*[:=]\s*['"][^'"]{3,}['"]/i.test(content))
-                    securityIssues.push('hardcoded secret');
-                if (/new\s+Function\s*\(/.test(content))
-                    securityIssues.push('new Function()');
-                fileStats.push({
-                    file: filePath,
-                    loc: nonEmpty,
-                    todos,
-                    functions: fns,
-                    imports: imps,
-                    maxNesting,
-                    securityIssues,
-                });
-            }
-            spinner.stop();
-            const totalLoc = fileStats.reduce((s, f) => s + f.loc, 0);
-            const totalTodos = fileStats.reduce((s, f) => s + f.todos, 0);
-            const totalFunctions = fileStats.reduce((s, f) => s + f.functions, 0);
-            const totalImports = fileStats.reduce((s, f) => s + f.imports, 0);
-            const avgFileSize = Math.round(totalLoc / files.length);
-            const longestFile = fileStats.reduce((a, b) => a.loc > b.loc ? a : b);
-            const avgFnPerFile = (totalFunctions / files.length).toFixed(1);
-            const deepestNesting = fileStats.reduce((a, b) => a.maxNesting > b.maxNesting ? a : b);
-            const allSecurityIssues = fileStats.filter(f => f.securityIssues.length > 0);
-            if (formatJson) {
-                const jsonData = { type: analysisType, path: targetPath, files: files.length, totalLoc, totalTodos, totalFunctions, totalImports, avgFileSize, fileStats: fileStats.map(f => ({ relativePath: path.relative(targetPath, f.file), loc: f.loc, todos: f.todos, functions: f.functions, imports: f.imports, maxNesting: f.maxNesting, securityIssues: f.securityIssues })) };
-                output.printJson(jsonData);
-                return { success: true, data: jsonData };
-            }
-            if (analysisType === 'quality') {
-                output.printBox([`Files: ${files.length}`, `Lines of Code: ${totalLoc.toLocaleString()}`, `Avg File Size: ${avgFileSize} LOC`, `TODO/FIXME: ${totalTodos}`, `Functions: ${totalFunctions}`, `Imports: ${totalImports}`].join('\n'), 'Quality Summary');
-                output.writeln();
-                output.writeln(output.bold('Largest Files'));
-                output.writeln(output.dim('-'.repeat(60)));
-                const top10 = [...fileStats].sort((a, b) => b.loc - a.loc).slice(0, 10);
-                output.printTable({
-                    columns: [
-                        { key: 'file', header: 'File', width: 45 },
-                        { key: 'loc', header: 'LOC', width: 8, align: 'right' },
-                        { key: 'fns', header: 'Fns', width: 6, align: 'right' },
-                        { key: 'todos', header: 'TODOs', width: 7, align: 'right' },
-                    ],
-                    data: top10.map(f => ({ file: path.relative(targetPath, f.file), loc: f.loc, fns: f.functions, todos: f.todos })),
-                });
-                if (totalTodos > 0) {
-                    output.writeln();
-                    output.printWarning(`${totalTodos} TODO/FIXME comments found across ${fileStats.filter(f => f.todos > 0).length} files`);
-                }
-            }
-            else if (analysisType === 'complexity') {
-                output.printBox([`Files: ${files.length}`, `Total Functions: ${totalFunctions}`, `Avg Functions/File: ${avgFnPerFile}`, `Deepest Nesting: ${deepestNesting.maxNesting} levels (${path.relative(targetPath, deepestNesting.file)})`, `Longest File: ${longestFile.loc} LOC (${path.relative(targetPath, longestFile.file)})`].join('\n'), 'Complexity Summary');
-                output.writeln();
-                output.writeln(output.bold('High Complexity Files (nesting > 5)'));
-                output.writeln(output.dim('-'.repeat(60)));
-                const complex = fileStats.filter(f => f.maxNesting > 5).sort((a, b) => b.maxNesting - a.maxNesting);
-                if (complex.length === 0) {
-                    output.printSuccess('No files with excessive nesting detected');
-                }
-                else {
-                    output.printTable({
-                        columns: [
-                            { key: 'file', header: 'File', width: 45 },
-                            { key: 'nesting', header: 'Max Nest', width: 10, align: 'right' },
-                            { key: 'fns', header: 'Fns', width: 6, align: 'right' },
-                            { key: 'loc', header: 'LOC', width: 8, align: 'right' },
-                        ],
-                        data: complex.slice(0, 15).map(f => ({ file: path.relative(targetPath, f.file), nesting: f.maxNesting, fns: f.functions, loc: f.loc })),
-                    });
-                }
-            }
-            else if (analysisType === 'security') {
-                output.printBox([`Files Scanned: ${files.length}`, `Files with Issues: ${allSecurityIssues.length}`, `Total Issues: ${allSecurityIssues.reduce((s, f) => s + f.securityIssues.length, 0)}`].join('\n'), 'Security Summary');
-                if (allSecurityIssues.length === 0) {
-                    output.writeln();
-                    output.printSuccess('No common security patterns detected');
-                }
-                else {
-                    output.writeln();
-                    output.writeln(output.bold('Security Concerns'));
-                    output.writeln(output.dim('-'.repeat(60)));
-                    output.printTable({
-                        columns: [
-                            { key: 'file', header: 'File', width: 40 },
-                            { key: 'issues', header: 'Issues', width: 35 },
-                        ],
-                        data: allSecurityIssues.map(f => ({ file: path.relative(targetPath, f.file), issues: f.securityIssues.join(', ') })),
-                    });
-                }
-            }
-            else {
-                output.printWarning(`Unknown analysis type: ${analysisType}. Use quality, complexity, or security.`);
-            }
-            return { success: true };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Code analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-// ============================================================================
-// AST Analysis Subcommands (using ruvector tree-sitter with fallback)
-// ============================================================================
-/**
- * Helper: Truncate file path for display
- */
-function truncatePathAst(filePath, maxLen = 45) {
-    if (filePath.length <= maxLen)
-        return filePath;
-    return '...' + filePath.slice(-(maxLen - 3));
-}
-/**
- * Helper: Format complexity value with color coding
- */
-function formatComplexityValueAst(value) {
-    if (value <= 5)
-        return output.success(String(value));
-    if (value <= 10)
-        return output.warning(String(value));
-    return output.error(String(value));
-}
-/**
- * Helper: Get type marker for symbols
- */
-function getTypeMarkerAst(type) {
-    switch (type) {
-        case 'function': return output.success('fn');
-        case 'class': return output.info('class');
-        case 'variable': return output.dim('var');
-        case 'type': return output.highlight('type');
-        case 'interface': return output.highlight('iface');
-        default: return output.dim(type.slice(0, 5));
-    }
-}
-/**
- * Helper: Get complexity rating text
- */
-function getComplexityRatingAst(value) {
-    if (value <= 5)
-        return output.success('Simple');
-    if (value <= 10)
-        return output.warning('Moderate');
-    if (value <= 20)
-        return output.error('Complex');
-    return output.error(output.bold('Very Complex'));
-}
-/**
- * AST analysis subcommand
- */
-const astCommand = {
-    name: 'ast',
-    description: 'Analyze code using AST parsing (tree-sitter via ruvector)',
-    options: [
-        {
-            name: 'complexity',
-            short: 'c',
-            description: 'Include complexity metrics',
-            type: 'boolean',
-            default: false,
-        },
-        {
-            name: 'symbols',
-            short: 's',
-            description: 'Include symbol extraction',
-            type: 'boolean',
-            default: false,
-        },
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format (text, json, table)',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json', 'table'],
-        },
-        {
-            name: 'output',
-            short: 'o',
-            description: 'Output file path',
-            type: 'string',
-        },
-        {
-            name: 'verbose',
-            short: 'v',
-            description: 'Show detailed analysis',
-            type: 'boolean',
-            default: false,
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze ast src/', description: 'Analyze all files in src/' },
-        { command: 'monomind analyze ast src/index.ts --complexity', description: 'Analyze with complexity' },
-        { command: 'monomind analyze ast . --format json', description: 'JSON output' },
-        { command: 'monomind analyze ast src/ --symbols', description: 'Extract symbols' },
-    ],
-    action: async (ctx) => {
-        const targetPath = ctx.args[0] || ctx.cwd;
-        const showComplexity = ctx.flags.complexity;
-        const showSymbols = ctx.flags.symbols;
-        const formatType = ctx.flags.format || 'text';
-        const outputFile = ctx.flags.output;
-        const verbose = ctx.flags.verbose;
-        // If no specific flags, show summary
-        const showAll = !showComplexity && !showSymbols;
-        output.printInfo(`Analyzing: ${output.highlight(targetPath)}`);
-        output.writeln();
-        const spinner = output.createSpinner({ text: 'Parsing AST...', spinner: 'dots' });
-        spinner.start();
-        try {
-            const astModule = await getASTAnalyzer();
-            if (!astModule) {
-                spinner.stop();
-                output.printWarning('AST analyzer not available, using regex fallback');
-            }
-            // Resolve path and check if file or directory
-            const resolvedPath = resolve(targetPath);
-            const stat = await fs.stat(resolvedPath);
-            const isDirectory = stat.isDirectory();
-            let results = [];
-            if (isDirectory) {
-                // Scan directory for source files
-                const files = await scanSourceFiles(resolvedPath);
-                spinner.stop();
-                output.printInfo(`Found ${files.length} source files`);
-                spinner.start();
-                for (const file of files.slice(0, 100)) {
-                    try {
-                        const content = await fs.readFile(file, 'utf-8');
-                        if (astModule) {
-                            const analyzer = astModule.createASTAnalyzer();
-                            const analysis = analyzer.analyze(content, file);
-                            results.push(analysis);
-                        }
-                        else {
-                            // Fallback analysis
-                            results.push(fallbackAnalyze(content, file));
-                        }
-                    }
-                    catch {
-                        // Skip files that can't be analyzed
-                    }
-                }
-            }
-            else {
-                // Single file
-                const content = await fs.readFile(resolvedPath, 'utf-8');
-                if (astModule) {
-                    const analyzer = astModule.createASTAnalyzer();
-                    const analysis = analyzer.analyze(content, resolvedPath);
-                    results.push(analysis);
-                }
-                else {
-                    results.push(fallbackAnalyze(content, resolvedPath));
-                }
-            }
-            spinner.stop();
-            if (results.length === 0) {
-                output.printWarning('No files analyzed');
-                return { success: true };
-            }
-            // Calculate totals
-            const totals = {
-                files: results.length,
-                functions: results.reduce((sum, r) => sum + r.functions.length, 0),
-                classes: results.reduce((sum, r) => sum + r.classes.length, 0),
-                imports: results.reduce((sum, r) => sum + r.imports.length, 0),
-                avgComplexity: results.reduce((sum, r) => sum + r.complexity.cyclomatic, 0) / results.length,
-                totalLoc: results.reduce((sum, r) => sum + r.complexity.loc, 0),
-            };
-            // JSON output
-            if (formatType === 'json') {
-                const jsonOutput = { files: results, totals };
-                if (outputFile) {
-                    await writeFile(outputFile, JSON.stringify(jsonOutput, null, 2));
-                    output.printSuccess(`Results written to ${outputFile}`);
-                }
-                else {
-                    output.printJson(jsonOutput);
-                }
-                return { success: true, data: jsonOutput };
-            }
-            // Summary box
-            output.printBox([
-                `Files analyzed: ${totals.files}`,
-                `Functions: ${totals.functions}`,
-                `Classes: ${totals.classes}`,
-                `Total LOC: ${totals.totalLoc}`,
-                `Avg Complexity: ${formatComplexityValueAst(Math.round(totals.avgComplexity))}`,
-            ].join('\n'), 'AST Analysis Summary');
-            // Complexity view
-            if (showComplexity || showAll) {
-                output.writeln();
-                output.writeln(output.bold('Complexity by File'));
-                output.writeln(output.dim('-'.repeat(60)));
-                const complexityData = results
-                    .map(r => ({
-                    file: truncatePathAst(r.filePath),
-                    cyclomatic: r.complexity.cyclomatic,
-                    cognitive: r.complexity.cognitive,
-                    loc: r.complexity.loc,
-                    rating: getComplexityRatingAst(r.complexity.cyclomatic),
-                }))
-                    .sort((a, b) => b.cyclomatic - a.cyclomatic)
-                    .slice(0, 15);
-                output.printTable({
-                    columns: [
-                        { key: 'file', header: 'File', width: 40 },
-                        { key: 'cyclomatic', header: 'Cyclo', width: 8, align: 'right', format: (v) => formatComplexityValueAst(v) },
-                        { key: 'cognitive', header: 'Cogni', width: 8, align: 'right' },
-                        { key: 'loc', header: 'LOC', width: 8, align: 'right' },
-                        { key: 'rating', header: 'Rating', width: 15 },
-                    ],
-                    data: complexityData,
-                });
-                if (results.length > 15) {
-                    output.writeln(output.dim(`  ... and ${results.length - 15} more files`));
-                }
-            }
-            // Symbols view
-            if (showSymbols || showAll) {
-                output.writeln();
-                output.writeln(output.bold('Extracted Symbols'));
-                output.writeln(output.dim('-'.repeat(60)));
-                const allSymbols = [];
-                for (const r of results) {
-                    for (const fn of r.functions) {
-                        allSymbols.push({ name: fn.name, type: 'function', file: truncatePathAst(r.filePath, 30), line: fn.startLine });
-                    }
-                    for (const cls of r.classes) {
-                        allSymbols.push({ name: cls.name, type: 'class', file: truncatePathAst(r.filePath, 30), line: cls.startLine });
-                    }
-                }
-                const displaySymbols = allSymbols.slice(0, 20);
-                output.printTable({
-                    columns: [
-                        { key: 'type', header: 'Type', width: 8, format: (v) => getTypeMarkerAst(v) },
-                        { key: 'name', header: 'Symbol', width: 30 },
-                        { key: 'file', header: 'File', width: 35 },
-                        { key: 'line', header: 'Line', width: 8, align: 'right' },
-                    ],
-                    data: displaySymbols,
-                });
-                if (allSymbols.length > 20) {
-                    output.writeln(output.dim(`  ... and ${allSymbols.length - 20} more symbols`));
-                }
-            }
-            // Verbose output
-            if (verbose) {
-                output.writeln();
-                output.writeln(output.bold('Import Analysis'));
-                output.writeln(output.dim('-'.repeat(60)));
-                const importCounts = new Map();
-                for (const r of results) {
-                    for (const imp of r.imports) {
-                        importCounts.set(imp, (importCounts.get(imp) || 0) + 1);
-                    }
-                }
-                const topImports = Array.from(importCounts.entries())
-                    .sort((a, b) => b[1] - a[1])
-                    .slice(0, 10);
-                for (const [imp, count] of topImports) {
-                    output.writeln(`  ${output.highlight(count.toString().padStart(3))} ${imp}`);
-                }
-            }
-            if (outputFile) {
-                await writeFile(outputFile, JSON.stringify({ files: results, totals }, null, 2));
-                output.printSuccess(`Results written to ${outputFile}`);
-            }
-            return { success: true, data: { files: results, totals } };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`AST analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-/**
- * Complexity analysis subcommand
- */
-const complexityAstCommand = {
-    name: 'complexity',
-    aliases: ['cx'],
-    description: 'Analyze code complexity metrics',
-    options: [
-        {
-            name: 'threshold',
-            short: 't',
-            description: 'Complexity threshold to flag (default: 10)',
-            type: 'number',
-            default: 10,
-        },
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format (text, json)',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json'],
-        },
-        {
-            name: 'output',
-            short: 'o',
-            description: 'Output file path',
-            type: 'string',
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze complexity src/', description: 'Analyze complexity' },
-        { command: 'monomind analyze complexity src/ --threshold 15', description: 'Flag high complexity' },
-    ],
-    action: async (ctx) => {
-        const targetPath = ctx.args[0] || ctx.cwd;
-        const threshold = ctx.flags.threshold || 10;
-        const formatType = ctx.flags.format || 'text';
-        const outputFile = ctx.flags.output;
-        output.printInfo(`Analyzing complexity: ${output.highlight(targetPath)}`);
-        output.writeln();
-        const spinner = output.createSpinner({ text: 'Calculating complexity...', spinner: 'dots' });
-        spinner.start();
-        try {
-            const astModule = await getASTAnalyzer();
-            const resolvedPath = resolve(targetPath);
-            const stat = await fs.stat(resolvedPath);
-            const files = stat.isDirectory() ? await scanSourceFiles(resolvedPath) : [resolvedPath];
-            const results = [];
-            for (const file of files.slice(0, 100)) {
-                try {
-                    const content = await fs.readFile(file, 'utf-8');
-                    let analysis;
-                    if (astModule) {
-                        const analyzer = astModule.createASTAnalyzer();
-                        analysis = analyzer.analyze(content, file);
-                    }
-                    else {
-                        analysis = fallbackAnalyze(content, file);
-                    }
-                    const flagged = analysis.complexity.cyclomatic > threshold;
-                    const rating = analysis.complexity.cyclomatic <= 5 ? 'Simple' :
-                        analysis.complexity.cyclomatic <= 10 ? 'Moderate' :
-                            analysis.complexity.cyclomatic <= 20 ? 'Complex' : 'Very Complex';
-                    results.push({
-                        file: file,
-                        cyclomatic: analysis.complexity.cyclomatic,
-                        cognitive: analysis.complexity.cognitive,
-                        loc: analysis.complexity.loc,
-                        commentDensity: analysis.complexity.commentDensity,
-                        rating,
-                        flagged,
-                    });
-                }
-                catch {
-                    // Skip files that can't be analyzed
-                }
-            }
-            spinner.stop();
-            // Sort by complexity descending
-            results.sort((a, b) => b.cyclomatic - a.cyclomatic);
-            const flaggedCount = results.filter(r => r.flagged).length;
-            const avgComplexity = results.length > 0
-                ? results.reduce((sum, r) => sum + r.cyclomatic, 0) / results.length
-                : 0;
-            if (formatType === 'json') {
-                const jsonOutput = { files: results, summary: { total: results.length, flagged: flaggedCount, avgComplexity, threshold } };
-                if (outputFile) {
-                    await writeFile(outputFile, JSON.stringify(jsonOutput, null, 2));
-                    output.printSuccess(`Results written to ${outputFile}`);
-                }
-                else {
-                    output.printJson(jsonOutput);
-                }
-                return { success: true, data: jsonOutput };
-            }
-            // Summary
-            output.printBox([
-                `Files analyzed: ${results.length}`,
-                `Threshold: ${threshold}`,
-                `Flagged files: ${flaggedCount > 0 ? output.error(String(flaggedCount)) : output.success('0')}`,
-                `Average complexity: ${formatComplexityValueAst(Math.round(avgComplexity))}`,
-            ].join('\n'), 'Complexity Analysis');
-            // Show flagged files first
-            if (flaggedCount > 0) {
-                output.writeln();
-                output.writeln(output.bold(output.warning(`High Complexity Files (>${threshold})`)));
-                output.writeln(output.dim('-'.repeat(60)));
-                const flaggedFiles = results.filter(r => r.flagged).slice(0, 10);
-                output.printTable({
-                    columns: [
-                        { key: 'file', header: 'File', width: 40, format: (v) => truncatePathAst(v) },
-                        { key: 'cyclomatic', header: 'Cyclo', width: 8, align: 'right', format: (v) => output.error(String(v)) },
-                        { key: 'cognitive', header: 'Cogni', width: 8, align: 'right' },
-                        { key: 'loc', header: 'LOC', width: 8, align: 'right' },
-                        { key: 'rating', header: 'Rating', width: 15 },
-                    ],
-                    data: flaggedFiles,
-                });
-            }
-            // Show all files in table format
-            output.writeln();
-            output.writeln(output.bold('All Files'));
-            output.writeln(output.dim('-'.repeat(60)));
-            const displayFiles = results.slice(0, 15);
-            output.printTable({
-                columns: [
-                    { key: 'file', header: 'File', width: 40, format: (v) => truncatePathAst(v) },
-                    { key: 'cyclomatic', header: 'Cyclo', width: 8, align: 'right', format: (v) => formatComplexityValueAst(v) },
-                    { key: 'cognitive', header: 'Cogni', width: 8, align: 'right' },
-                    { key: 'loc', header: 'LOC', width: 8, align: 'right' },
-                ],
-                data: displayFiles,
-            });
-            if (results.length > 15) {
-                output.writeln(output.dim(`  ... and ${results.length - 15} more files`));
-            }
-            if (outputFile) {
-                await writeFile(outputFile, JSON.stringify({ files: results, summary: { total: results.length, flagged: flaggedCount, avgComplexity, threshold } }, null, 2));
-                output.printSuccess(`Results written to ${outputFile}`);
-            }
-            return { success: true, data: { files: results, flaggedCount } };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Complexity analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-/**
- * Symbol extraction subcommand
- */
-const symbolsCommand = {
-    name: 'symbols',
-    aliases: ['sym'],
-    description: 'Extract and list code symbols (functions, classes, types)',
-    options: [
-        {
-            name: 'type',
-            short: 't',
-            description: 'Filter by symbol type (function, class, all)',
-            type: 'string',
-            default: 'all',
-            choices: ['function', 'class', 'all'],
-        },
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format (text, json)',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json'],
-        },
-        {
-            name: 'output',
-            short: 'o',
-            description: 'Output file path',
-            type: 'string',
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze symbols src/', description: 'Extract all symbols' },
-        { command: 'monomind analyze symbols src/ --type function', description: 'Only functions' },
-        { command: 'monomind analyze symbols src/ --format json', description: 'JSON output' },
-    ],
-    action: async (ctx) => {
-        const targetPath = ctx.args[0] || ctx.cwd;
-        const symbolType = ctx.flags.type || 'all';
-        const formatType = ctx.flags.format || 'text';
-        const outputFile = ctx.flags.output;
-        output.printInfo(`Extracting symbols: ${output.highlight(targetPath)}`);
-        output.writeln();
-        const spinner = output.createSpinner({ text: 'Parsing code...', spinner: 'dots' });
-        spinner.start();
-        try {
-            const astModule = await getASTAnalyzer();
-            const resolvedPath = resolve(targetPath);
-            const stat = await fs.stat(resolvedPath);
-            const files = stat.isDirectory() ? await scanSourceFiles(resolvedPath) : [resolvedPath];
-            const symbols = [];
-            for (const file of files.slice(0, 100)) {
-                try {
-                    const content = await fs.readFile(file, 'utf-8');
-                    let analysis;
-                    if (astModule) {
-                        const analyzer = astModule.createASTAnalyzer();
-                        analysis = analyzer.analyze(content, file);
-                    }
-                    else {
-                        analysis = fallbackAnalyze(content, file);
-                    }
-                    if (symbolType === 'all' || symbolType === 'function') {
-                        for (const fn of analysis.functions) {
-                            symbols.push({
-                                name: fn.name,
-                                type: 'function',
-                                file,
-                                startLine: fn.startLine,
-                                endLine: fn.endLine,
-                            });
-                        }
-                    }
-                    if (symbolType === 'all' || symbolType === 'class') {
-                        for (const cls of analysis.classes) {
-                            symbols.push({
-                                name: cls.name,
-                                type: 'class',
-                                file,
-                                startLine: cls.startLine,
-                                endLine: cls.endLine,
-                            });
-                        }
-                    }
-                }
-                catch {
-                    // Skip files that can't be parsed
-                }
-            }
-            spinner.stop();
-            // Sort by file then name
-            symbols.sort((a, b) => a.file.localeCompare(b.file) || a.name.localeCompare(b.name));
-            if (formatType === 'json') {
-                if (outputFile) {
-                    await writeFile(outputFile, JSON.stringify(symbols, null, 2));
-                    output.printSuccess(`Results written to ${outputFile}`);
-                }
-                else {
-                    output.printJson(symbols);
-                }
-                return { success: true, data: symbols };
-            }
-            // Summary
-            const functionCount = symbols.filter(s => s.type === 'function').length;
-            const classCount = symbols.filter(s => s.type === 'class').length;
-            output.printBox([
-                `Total symbols: ${symbols.length}`,
-                `Functions: ${functionCount}`,
-                `Classes: ${classCount}`,
-                `Files: ${files.length}`,
-            ].join('\n'), 'Symbol Extraction');
-            output.writeln();
-            output.writeln(output.bold('Symbols'));
-            output.writeln(output.dim('-'.repeat(60)));
-            const displaySymbols = symbols.slice(0, 30);
-            output.printTable({
-                columns: [
-                    { key: 'type', header: 'Type', width: 10, format: (v) => getTypeMarkerAst(v) },
-                    { key: 'name', header: 'Name', width: 30 },
-                    { key: 'file', header: 'File', width: 35, format: (v) => truncatePathAst(v, 33) },
-                    { key: 'startLine', header: 'Line', width: 8, align: 'right' },
-                ],
-                data: displaySymbols,
-            });
-            if (symbols.length > 30) {
-                output.writeln(output.dim(`  ... and ${symbols.length - 30} more symbols`));
-            }
-            if (outputFile) {
-                await writeFile(outputFile, JSON.stringify(symbols, null, 2));
-                output.printSuccess(`Results written to ${outputFile}`);
-            }
-            return { success: true, data: symbols };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Symbol extraction failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-/**
- * Imports analysis subcommand
- */
-const importsCommand = {
-    name: 'imports',
-    aliases: ['imp'],
-    description: 'Analyze import dependencies across files',
-    options: [
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format (text, json)',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json'],
-        },
-        {
-            name: 'output',
-            short: 'o',
-            description: 'Output file path',
-            type: 'string',
-        },
-        {
-            name: 'external',
-            short: 'e',
-            description: 'Show only external (npm) imports',
-            type: 'boolean',
-            default: false,
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze imports src/', description: 'Analyze all imports' },
-        { command: 'monomind analyze imports src/ --external', description: 'Only npm packages' },
-    ],
-    action: async (ctx) => {
-        const targetPath = ctx.args[0] || ctx.cwd;
-        const formatType = ctx.flags.format || 'text';
-        const outputFile = ctx.flags.output;
-        const externalOnly = ctx.flags.external;
-        output.printInfo(`Analyzing imports: ${output.highlight(targetPath)}`);
-        output.writeln();
-        const spinner = output.createSpinner({ text: 'Scanning imports...', spinner: 'dots' });
-        spinner.start();
-        try {
-            const astModule = await getASTAnalyzer();
-            const resolvedPath = resolve(targetPath);
-            const stat = await fs.stat(resolvedPath);
-            const files = stat.isDirectory() ? await scanSourceFiles(resolvedPath) : [resolvedPath];
-            const importCounts = new Map();
-            const fileImports = new Map();
-            for (const file of files.slice(0, 100)) {
-                try {
-                    const content = await fs.readFile(file, 'utf-8');
-                    let analysis;
-                    if (astModule) {
-                        const analyzer = astModule.createASTAnalyzer();
-                        analysis = analyzer.analyze(content, file);
-                    }
-                    else {
-                        analysis = fallbackAnalyze(content, file);
-                    }
-                    const imports = analysis.imports.filter(imp => {
-                        if (externalOnly) {
-                            return !imp.startsWith('.') && !imp.startsWith('/');
-                        }
-                        return true;
-                    });
-                    fileImports.set(file, imports);
-                    for (const imp of imports) {
-                        const existing = importCounts.get(imp) || { count: 0, files: [] };
-                        existing.count++;
-                        existing.files.push(file);
-                        importCounts.set(imp, existing);
-                    }
-                }
-                catch {
-                    // Skip files that can't be parsed
-                }
-            }
-            spinner.stop();
-            // Sort by count
-            const sortedImports = Array.from(importCounts.entries())
-                .sort((a, b) => b[1].count - a[1].count);
-            if (formatType === 'json') {
-                const jsonOutput = {
-                    imports: Object.fromEntries(sortedImports),
-                    fileImports: Object.fromEntries(fileImports),
-                };
-                if (outputFile) {
-                    await writeFile(outputFile, JSON.stringify(jsonOutput, null, 2));
-                    output.printSuccess(`Results written to ${outputFile}`);
-                }
-                else {
-                    output.printJson(jsonOutput);
-                }
-                return { success: true, data: jsonOutput };
-            }
-            // Summary
-            const externalImports = sortedImports.filter(([imp]) => !imp.startsWith('.') && !imp.startsWith('/'));
-            const localImports = sortedImports.filter(([imp]) => imp.startsWith('.') || imp.startsWith('/'));
-            output.printBox([
-                `Total unique imports: ${sortedImports.length}`,
-                `External (npm): ${externalImports.length}`,
-                `Local (relative): ${localImports.length}`,
-                `Files scanned: ${files.length}`,
-            ].join('\n'), 'Import Analysis');
-            // Most used imports
-            output.writeln();
-            output.writeln(output.bold('Most Used Imports'));
-            output.writeln(output.dim('-'.repeat(60)));
-            const topImports = sortedImports.slice(0, 20);
-            output.printTable({
-                columns: [
-                    { key: 'count', header: 'Uses', width: 8, align: 'right' },
-                    { key: 'import', header: 'Import', width: 50 },
-                    { key: 'type', header: 'Type', width: 10 },
-                ],
-                data: topImports.map(([imp, data]) => ({
-                    count: data.count,
-                    import: imp,
-                    type: imp.startsWith('.') || imp.startsWith('/') ? output.dim('local') : output.highlight('npm'),
-                })),
-            });
-            if (sortedImports.length > 20) {
-                output.writeln(output.dim(`  ... and ${sortedImports.length - 20} more imports`));
-            }
-            if (outputFile) {
-                await writeFile(outputFile, JSON.stringify({
-                    imports: Object.fromEntries(sortedImports),
-                    fileImports: Object.fromEntries(fileImports),
-                }, null, 2));
-                output.printSuccess(`Results written to ${outputFile}`);
-            }
-            return { success: true, data: { imports: sortedImports } };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Import analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-/**
- * Helper: Scan directory for source files
- */
-async function scanSourceFiles(dir, maxDepth = 10) {
-    const files = [];
-    const extensions = ['.ts', '.tsx', '.js', '.jsx', '.mjs', '.cjs'];
-    const excludeDirs = ['node_modules', 'dist', 'build', '.git', 'coverage', '__pycache__'];
-    async function scan(currentDir, depth) {
-        if (depth > maxDepth)
-            return;
-        try {
-            const entries = await fs.readdir(currentDir, { withFileTypes: true });
-            for (const entry of entries) {
-                const fullPath = path.join(currentDir, entry.name);
-                if (entry.isDirectory()) {
-                    if (!excludeDirs.includes(entry.name)) {
-                        await scan(fullPath, depth + 1);
-                    }
-                }
-                else if (entry.isFile()) {
-                    const ext = path.extname(entry.name);
-                    if (extensions.includes(ext)) {
-                        files.push(fullPath);
-                    }
-                }
-            }
-        }
-        catch {
-            // Skip directories we can't read
-        }
-    }
-    await scan(dir, 0);
-    return files;
-}
-/**
- * Fallback analysis when ruvector is not available
- */
-function fallbackAnalyze(code, filePath) {
-    const lines = code.split('\n');
-    const functions = [];
-    const classes = [];
-    const imports = [];
-    const exports = [];
-    // Extract functions
-    const funcPattern = /(?:export\s+)?(?:async\s+)?function\s+(\w+)|(?:const|let|var)\s+(\w+)\s*=\s*(?:async\s+)?\([^)]*\)\s*=>|^\s*(?:async\s+)?(\w+)\s*\([^)]*\)\s*(?::\s*\w+)?\s*\{/gm;
-    let match;
-    while ((match = funcPattern.exec(code)) !== null) {
-        const name = match[1] || match[2] || match[3];
-        if (name && !['if', 'while', 'for', 'switch'].includes(name)) {
-            const lineNum = code.substring(0, match.index).split('\n').length;
-            functions.push({ name, startLine: lineNum, endLine: lineNum + 10 });
-        }
-    }
-    // Extract classes
-    const classPattern = /(?:export\s+)?class\s+(\w+)/gm;
-    while ((match = classPattern.exec(code)) !== null) {
-        const lineNum = code.substring(0, match.index).split('\n').length;
-        classes.push({ name: match[1], startLine: lineNum, endLine: lineNum + 20 });
-    }
-    // Extract imports
-    const importPattern = /import\s+(?:.*\s+from\s+)?['"]([^'"]+)['"]/gm;
-    while ((match = importPattern.exec(code)) !== null) {
-        imports.push(match[1]);
-    }
-    const requirePattern = /require\s*\(\s*['"]([^'"]+)['"]\s*\)/gm;
-    while ((match = requirePattern.exec(code)) !== null) {
-        imports.push(match[1]);
-    }
-    // Extract exports
-    const exportPattern = /export\s+(?:default\s+)?(?:const|let|var|function|class|interface|type|enum)\s+(\w+)/gm;
-    while ((match = exportPattern.exec(code)) !== null) {
-        exports.push(match[1]);
-    }
-    // Calculate complexity
-    const nonEmptyLines = lines.filter(l => l.trim().length > 0).length;
-    const commentLines = lines.filter(l => /^\s*(\/\/|\/\*|\*|#)/.test(l)).length;
-    const decisionPoints = (code.match(/\b(if|else|for|while|switch|case|catch|&&|\|\||\?)\b/g) || []).length;
-    let cognitive = 0;
-    let nestingLevel = 0;
-    for (const line of lines) {
-        const opens = (line.match(/\{/g) || []).length;
-        const closes = (line.match(/\}/g) || []).length;
-        if (/\b(if|for|while|switch)\b/.test(line)) {
-            cognitive += 1 + nestingLevel;
-        }
-        nestingLevel = Math.max(0, nestingLevel + opens - closes);
-    }
-    // Detect language
-    const ext = path.extname(filePath).toLowerCase();
-    const language = ext === '.ts' || ext === '.tsx' ? 'typescript' :
-        ext === '.js' || ext === '.jsx' || ext === '.mjs' || ext === '.cjs' ? 'javascript' :
-            ext === '.py' ? 'python' : 'unknown';
-    return {
-        filePath,
-        language,
-        functions,
-        classes,
-        imports,
-        exports,
-        complexity: {
-            cyclomatic: decisionPoints + 1,
-            cognitive,
-            loc: nonEmptyLines,
-            commentDensity: lines.length > 0 ? commentLines / lines.length : 0,
-        },
-    };
-}
-// Dependencies subcommand
-const depsCommand = {
-    name: 'deps',
-    description: 'Analyze project dependencies',
-    options: [
-        { name: 'outdated', short: 'o', type: 'boolean', description: 'Show only outdated dependencies' },
-        { name: 'security', short: 's', type: 'boolean', description: 'Check for security vulnerabilities' },
-        { name: 'format', short: 'f', type: 'string', description: 'Output format: text, json', default: 'text' },
-    ],
-    examples: [
-        { command: 'monomind analyze deps --outdated', description: 'Show outdated dependencies' },
-        { command: 'monomind analyze deps --security', description: 'Check for vulnerabilities' },
-    ],
-    action: async (ctx) => {
-        const showOutdated = ctx.flags.outdated;
-        const checkSecurity = ctx.flags.security;
-        const formatJson = ctx.flags.format === 'json';
-        output.writeln();
-        output.writeln(output.bold('Dependency Analysis'));
-        output.writeln(output.dim('-'.repeat(50)));
-        try {
-            const pkgPath = resolve('package.json');
-            let pkgContent;
-            try {
-                pkgContent = await fs.readFile(pkgPath, 'utf-8');
-            }
-            catch {
-                output.printError('No package.json found in current directory');
-                return { success: false, exitCode: 1 };
-            }
-            const pkg = JSON.parse(pkgContent);
-            const deps = Object.entries(pkg.dependencies || {});
-            const devDeps = Object.entries(pkg.devDependencies || {});
-            const optDeps = Object.entries(pkg.optionalDependencies || {});
-            const peerDeps = Object.entries(pkg.peerDependencies || {});
-            const total = deps.length + devDeps.length + optDeps.length + peerDeps.length;
-            if (formatJson && !showOutdated && !checkSecurity) {
-                const jsonData = { name: pkg.name, version: pkg.version, dependencies: deps.length, devDependencies: devDeps.length, optionalDependencies: optDeps.length, peerDependencies: peerDeps.length, total };
-                output.printJson(jsonData);
-                return { success: true, data: jsonData };
-            }
-            output.printBox([`Package: ${pkg.name || 'unknown'} @ ${pkg.version || '0.0.0'}`, `Dependencies: ${deps.length}`, `Dev Dependencies: ${devDeps.length}`, `Optional: ${optDeps.length}`, `Peer: ${peerDeps.length}`, `Total: ${total}`].join('\n'), 'Dependency Summary');
-            if (showOutdated) {
-                output.writeln();
-                output.writeln(output.bold('Outdated Check'));
-                output.writeln(output.dim('-'.repeat(60)));
-                const outdated = [];
-                const checkDeps = async (entries, category) => {
-                    for (const [name, declared] of entries) {
-                        try {
-                            const installedPkg = resolve('node_modules', name, 'package.json');
-                            const raw = await fs.readFile(installedPkg, 'utf-8');
-                            const installedContent = JSON.parse(raw);
-                            const installed = installedContent.version || 'unknown';
-                            const cleanDeclared = declared.replace(/^[\^~>=<]+/, '');
-                            if (installed !== cleanDeclared) {
-                                outdated.push({ name, declared: declared, installed, category });
-                            }
-                        }
-                        catch {
-                            outdated.push({ name, declared: declared, installed: 'not installed', category });
-                        }
-                    }
-                };
-                await checkDeps(deps, 'prod');
-                await checkDeps(devDeps, 'dev');
-                if (outdated.length === 0) {
-                    output.printSuccess('All dependencies match declared versions');
-                }
-                else {
-                    output.printTable({
-                        columns: [
-                            { key: 'name', header: 'Package', width: 30 },
-                            { key: 'declared', header: 'Declared', width: 14 },
-                            { key: 'installed', header: 'Installed', width: 14 },
-                            { key: 'category', header: 'Type', width: 6 },
-                        ],
-                        data: outdated.slice(0, 30),
-                    });
-                    if (outdated.length > 30) {
-                        output.writeln(output.dim(`  ... and ${outdated.length - 30} more`));
-                    }
-                }
-            }
-            if (checkSecurity) {
-                output.writeln();
-                output.writeln(output.bold('Security Audit'));
-                output.writeln(output.dim('-'.repeat(60)));
-                try {
-                    const auditRaw = execSync('npm audit --json 2>/dev/null', { encoding: 'utf-8', maxBuffer: 10 * 1024 * 1024 });
-                    const audit = JSON.parse(auditRaw);
-                    const vulns = audit.metadata?.vulnerabilities || audit.vulnerabilities || {};
-                    const info = vulns.info || 0;
-                    const low = vulns.low || 0;
-                    const moderate = vulns.moderate || 0;
-                    const high = vulns.high || 0;
-                    const critical = vulns.critical || 0;
-                    const totalVulns = info + low + moderate + high + critical;
-                    if (totalVulns === 0) {
-                        output.printSuccess('No known vulnerabilities found');
-                    }
-                    else {
-                        output.printTable({
-                            columns: [
-                                { key: 'severity', header: 'Severity', width: 12 },
-                                { key: 'count', header: 'Count', width: 8, align: 'right' },
-                            ],
-                            data: [
-                                ...(critical > 0 ? [{ severity: 'Critical', count: critical }] : []),
-                                ...(high > 0 ? [{ severity: 'High', count: high }] : []),
-                                ...(moderate > 0 ? [{ severity: 'Moderate', count: moderate }] : []),
-                                ...(low > 0 ? [{ severity: 'Low', count: low }] : []),
-                                ...(info > 0 ? [{ severity: 'Info', count: info }] : []),
-                                { severity: 'Total', count: totalVulns },
-                            ],
-                        });
-                        if (critical > 0 || high > 0) {
-                            output.printWarning(`${critical + high} high/critical vulnerabilities found. Run 'npm audit' for details.`);
-                        }
-                    }
-                }
-                catch {
-                    output.printWarning('npm audit failed. Ensure npm is available and node_modules is installed.');
-                }
-            }
-            return { success: true };
-        }
-        catch (error) {
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Dependency analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-// ============================================================================
-// Graph Analysis Subcommands (MinCut, Louvain, Circular Dependencies)
-// ============================================================================
-/**
- * Analyze code boundaries using MinCut algorithm
- */
-const boundariesCommand = {
-    name: 'boundaries',
-    aliases: ['boundary', 'mincut'],
-    description: 'Find natural code boundaries using MinCut algorithm',
-    options: [
-        {
-            name: 'partitions',
-            short: 'p',
-            description: 'Number of partitions to find',
-            type: 'number',
-            default: 2,
-        },
-        {
-            name: 'output',
-            short: 'o',
-            description: 'Output file path',
-            type: 'string',
-        },
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format (text, json, dot)',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json', 'dot'],
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze boundaries src/', description: 'Find code boundaries in src/' },
-        { command: 'monomind analyze boundaries -p 3 src/', description: 'Find 3 partitions' },
-        { command: 'monomind analyze boundaries -f dot -o graph.dot src/', description: 'Export to DOT format' },
-    ],
-    action: async (ctx) => {
-        const targetDir = ctx.args[0] || ctx.cwd;
-        const numPartitions = ctx.flags.partitions || 2;
-        const outputFile = ctx.flags.output;
-        const format = ctx.flags.format || 'text';
-        output.printInfo(`Analyzing code boundaries in: ${output.highlight(targetDir)}`);
-        output.writeln();
-        const spinner = output.createSpinner({ text: 'Building dependency graph...', spinner: 'dots' });
-        spinner.start();
-        try {
-            const analyzer = await getGraphAnalyzer();
-            if (!analyzer) {
-                spinner.stop();
-                output.printError('Graph analyzer module not available');
-                return { success: false, exitCode: 1 };
-            }
-            const result = await analyzer.analyzeGraph(resolve(targetDir), {
-                includeBoundaries: true,
-                includeModules: false,
-                numPartitions,
-            });
-            spinner.stop();
-            // Handle different output formats
-            if (format === 'json') {
-                const jsonOutput = {
-                    boundaries: result.boundaries,
-                    statistics: result.statistics,
-                    circularDependencies: result.circularDependencies,
-                };
-                if (outputFile) {
-                    await writeFile(outputFile, JSON.stringify(jsonOutput, null, 2));
-                    output.printSuccess(`Results written to ${outputFile}`);
-                }
-                else {
-                    output.printJson(jsonOutput);
-                }
-                return { success: true, data: jsonOutput };
-            }
-            if (format === 'dot') {
-                const dotOutput = analyzer.exportToDot(result, {
-                    includeLabels: true,
-                    highlightCycles: true,
-                });
-                if (outputFile) {
-                    await writeFile(outputFile, dotOutput);
-                    output.printSuccess(`DOT graph written to ${outputFile}`);
-                    output.writeln(output.dim('Visualize with: dot -Tpng -o graph.png ' + outputFile));
-                }
-                else {
-                    output.writeln(dotOutput);
-                }
-                return { success: true };
-            }
-            // Text format (default)
-            output.printBox([
-                `Files analyzed: ${result.statistics.nodeCount}`,
-                `Dependencies: ${result.statistics.edgeCount}`,
-                `Avg degree: ${result.statistics.avgDegree.toFixed(2)}`,
-                `Density: ${(result.statistics.density * 100).toFixed(2)}%`,
-                `Components: ${result.statistics.componentCount}`,
-            ].join('\n'), 'Graph Statistics');
-            if (result.boundaries && result.boundaries.length > 0) {
-                output.writeln();
-                output.writeln(output.bold('MinCut Boundaries'));
-                output.writeln();
-                for (let i = 0; i < result.boundaries.length; i++) {
-                    const boundary = result.boundaries[i];
-                    output.writeln(output.bold(`Boundary ${i + 1} (cut value: ${boundary.cutValue})`));
-                    output.writeln();
-                    output.writeln(output.dim('Partition 1:'));
-                    const p1Display = boundary.partition1.slice(0, 10);
-                    output.printList(p1Display);
-                    if (boundary.partition1.length > 10) {
-                        output.writeln(output.dim(`  ... and ${boundary.partition1.length - 10} more files`));
-                    }
-                    output.writeln();
-                    output.writeln(output.dim('Partition 2:'));
-                    const p2Display = boundary.partition2.slice(0, 10);
-                    output.printList(p2Display);
-                    if (boundary.partition2.length > 10) {
-                        output.writeln(output.dim(`  ... and ${boundary.partition2.length - 10} more files`));
-                    }
-                    output.writeln();
-                    output.writeln(output.success('Suggestion:'));
-                    output.writeln(`  ${boundary.suggestion}`);
-                    output.writeln();
-                }
-            }
-            // Show circular dependencies
-            if (result.circularDependencies.length > 0) {
-                output.writeln();
-                output.writeln(output.bold(output.warning('Circular Dependencies Detected')));
-                output.writeln();
-                for (const cycle of result.circularDependencies.slice(0, 5)) {
-                    const severityColor = cycle.severity === 'high' ? output.error : cycle.severity === 'medium' ? output.warning : output.dim;
-                    output.writeln(`${severityColor(`[${cycle.severity.toUpperCase()}]`)} ${cycle.cycle.join(' -> ')}`);
-                    output.writeln(output.dim(`  ${cycle.suggestion}`));
-                    output.writeln();
-                }
-                if (result.circularDependencies.length > 5) {
-                    output.writeln(output.dim(`... and ${result.circularDependencies.length - 5} more cycles`));
-                }
-            }
-            if (outputFile) {
-                await writeFile(outputFile, JSON.stringify(result, null, 2));
-                output.printSuccess(`Full results written to ${outputFile}`);
-            }
-            return { success: true, data: result };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-/**
- * Analyze modules/communities using Louvain algorithm
- */
-const modulesCommand = {
-    name: 'modules',
-    aliases: ['communities', 'louvain'],
-    description: 'Detect module communities using Louvain algorithm',
-    options: [
-        {
-            name: 'output',
-            short: 'o',
-            description: 'Output file path',
-            type: 'string',
-        },
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format (text, json, dot)',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json', 'dot'],
-        },
-        {
-            name: 'min-size',
-            short: 'm',
-            description: 'Minimum community size to display',
-            type: 'number',
-            default: 2,
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze modules src/', description: 'Detect module communities' },
-        { command: 'monomind analyze modules -f dot -o modules.dot src/', description: 'Export colored DOT graph' },
-        { command: 'monomind analyze modules -m 3 src/', description: 'Only show communities with 3+ files' },
-    ],
-    action: async (ctx) => {
-        const targetDir = ctx.args[0] || ctx.cwd;
-        const outputFile = ctx.flags.output;
-        const format = ctx.flags.format || 'text';
-        const minSize = ctx.flags['min-size'] || 2;
-        output.printInfo(`Detecting module communities in: ${output.highlight(targetDir)}`);
-        output.writeln();
-        const spinner = output.createSpinner({ text: 'Building dependency graph...', spinner: 'dots' });
-        spinner.start();
-        try {
-            const analyzer = await getGraphAnalyzer();
-            if (!analyzer) {
-                spinner.stop();
-                output.printError('Graph analyzer module not available');
-                return { success: false, exitCode: 1 };
-            }
-            const result = await analyzer.analyzeGraph(resolve(targetDir), {
-                includeBoundaries: false,
-                includeModules: true,
-            });
-            spinner.stop();
-            // Filter communities by size
-            const communities = result.communities?.filter(c => c.members.length >= minSize) || [];
-            // Handle different output formats
-            if (format === 'json') {
-                const jsonOutput = {
-                    communities,
-                    statistics: result.statistics,
-                };
-                if (outputFile) {
-                    await writeFile(outputFile, JSON.stringify(jsonOutput, null, 2));
-                    output.printSuccess(`Results written to ${outputFile}`);
-                }
-                else {
-                    output.printJson(jsonOutput);
-                }
-                return { success: true, data: jsonOutput };
-            }
-            if (format === 'dot') {
-                const dotOutput = analyzer.exportToDot(result, {
-                    includeLabels: true,
-                    colorByCommunity: true,
-                    highlightCycles: true,
-                });
-                if (outputFile) {
-                    await writeFile(outputFile, dotOutput);
-                    output.printSuccess(`DOT graph written to ${outputFile}`);
-                    output.writeln(output.dim('Visualize with: dot -Tpng -o modules.png ' + outputFile));
-                }
-                else {
-                    output.writeln(dotOutput);
-                }
-                return { success: true };
-            }
-            // Text format (default)
-            output.printBox([
-                `Files analyzed: ${result.statistics.nodeCount}`,
-                `Dependencies: ${result.statistics.edgeCount}`,
-                `Communities found: ${result.communities?.length || 0}`,
-                `Showing: ${communities.length} (min size: ${minSize})`,
-            ].join('\n'), 'Module Detection Results');
-            if (communities.length > 0) {
-                output.writeln();
-                output.writeln(output.bold('Detected Communities'));
-                output.writeln();
-                for (const community of communities.slice(0, 10)) {
-                    const cohesionIndicator = community.cohesion > 0.5 ? output.success('High') :
-                        community.cohesion > 0.2 ? output.warning('Medium') : output.dim('Low');
-                    output.writeln(output.bold(`Community ${community.id}: ${community.suggestedName || 'unnamed'}`));
-                    output.writeln(`  ${output.dim('Cohesion:')} ${cohesionIndicator} (${(community.cohesion * 100).toFixed(1)}%)`);
-                    output.writeln(`  ${output.dim('Central node:')} ${community.centralNode || 'none'}`);
-                    output.writeln(`  ${output.dim('Members:')} ${community.members.length} files`);
-                    const displayMembers = community.members.slice(0, 5);
-                    for (const member of displayMembers) {
-                        output.writeln(`    - ${member}`);
-                    }
-                    if (community.members.length > 5) {
-                        output.writeln(output.dim(`    ... and ${community.members.length - 5} more`));
-                    }
-                    output.writeln();
-                }
-                if (communities.length > 10) {
-                    output.writeln(output.dim(`... and ${communities.length - 10} more communities`));
-                }
-            }
-            if (outputFile) {
-                await writeFile(outputFile, JSON.stringify(result, null, 2));
-                output.printSuccess(`Full results written to ${outputFile}`);
-            }
-            return { success: true, data: result };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-/**
- * Build and export dependency graph
- */
-const dependenciesCommand = {
-    name: 'dependencies',
-    aliases: ['graph'],
-    description: 'Build and export full dependency graph',
-    options: [
-        {
-            name: 'output',
-            short: 'o',
-            description: 'Output file path',
-            type: 'string',
-        },
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format (text, json, dot)',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json', 'dot'],
-        },
-        {
-            name: 'include',
-            short: 'i',
-            description: 'File extensions to include (comma-separated)',
-            type: 'string',
-            default: '.ts,.tsx,.js,.jsx,.mjs,.cjs',
-        },
-        {
-            name: 'exclude',
-            short: 'e',
-            description: 'Patterns to exclude (comma-separated)',
-            type: 'string',
-            default: 'node_modules,dist,build,.git',
-        },
-        {
-            name: 'depth',
-            short: 'd',
-            description: 'Maximum directory depth',
-            type: 'number',
-            default: 10,
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze dependencies src/', description: 'Build dependency graph' },
-        { command: 'monomind analyze dependencies -f dot -o deps.dot src/', description: 'Export to DOT' },
-        { command: 'monomind analyze dependencies -i .ts,.tsx src/', description: 'Only TypeScript files' },
-    ],
-    action: async (ctx) => {
-        const targetDir = ctx.args[0] || ctx.cwd;
-        const outputFile = ctx.flags.output;
-        const format = ctx.flags.format || 'text';
-        const include = (ctx.flags.include || '.ts,.tsx,.js,.jsx,.mjs,.cjs').split(',');
-        const exclude = (ctx.flags.exclude || 'node_modules,dist,build,.git').split(',');
-        const maxDepth = ctx.flags.depth || 10;
-        output.printInfo(`Building dependency graph for: ${output.highlight(targetDir)}`);
-        output.writeln();
-        const spinner = output.createSpinner({ text: 'Scanning files...', spinner: 'dots' });
-        spinner.start();
-        try {
-            const analyzer = await getGraphAnalyzer();
-            if (!analyzer) {
-                spinner.stop();
-                output.printError('Graph analyzer module not available');
-                return { success: false, exitCode: 1 };
-            }
-            const graph = await analyzer.buildDependencyGraph(resolve(targetDir), {
-                include,
-                exclude,
-                maxDepth,
-            });
-            spinner.stop();
-            // Detect circular dependencies
-            const circularDeps = analyzer.detectCircularDependencies(graph);
-            // Handle different output formats
-            if (format === 'json') {
-                const jsonOutput = {
-                    nodes: Array.from(graph.nodes.values()),
-                    edges: graph.edges,
-                    metadata: graph.metadata,
-                    circularDependencies: circularDeps,
-                };
-                if (outputFile) {
-                    await writeFile(outputFile, JSON.stringify(jsonOutput, null, 2));
-                    output.printSuccess(`Graph written to ${outputFile}`);
-                }
-                else {
-                    output.printJson(jsonOutput);
-                }
-                return { success: true, data: jsonOutput };
-            }
-            if (format === 'dot') {
-                const result = { graph, circularDependencies: circularDeps, statistics: {
-                        nodeCount: graph.nodes.size,
-                        edgeCount: graph.edges.length,
-                        avgDegree: 0,
-                        maxDegree: 0,
-                        density: 0,
-                        componentCount: 0,
-                    } };
-                const dotOutput = analyzer.exportToDot(result, {
-                    includeLabels: true,
-                    highlightCycles: true,
-                });
-                if (outputFile) {
-                    await writeFile(outputFile, dotOutput);
-                    output.printSuccess(`DOT graph written to ${outputFile}`);
-                    output.writeln(output.dim('Visualize with: dot -Tpng -o deps.png ' + outputFile));
-                }
-                else {
-                    output.writeln(dotOutput);
-                }
-                return { success: true };
-            }
-            // Text format (default)
-            output.printBox([
-                `Files: ${graph.metadata.totalFiles}`,
-                `Dependencies: ${graph.metadata.totalEdges}`,
-                `Build time: ${graph.metadata.buildTime}ms`,
-                `Root: ${graph.metadata.rootDir}`,
-            ].join('\n'), 'Dependency Graph');
-            // Show top files by imports
-            output.writeln();
-            output.writeln(output.bold('Most Connected Files'));
-            output.writeln();
-            const nodesByDegree = Array.from(graph.nodes.values())
-                .map(n => ({
-                ...n,
-                degree: graph.edges.filter(e => e.source === n.id || e.target === n.id).length,
-            }))
-                .sort((a, b) => b.degree - a.degree)
-                .slice(0, 10);
-            output.printTable({
-                columns: [
-                    { key: 'path', header: 'File', width: 50 },
-                    { key: 'degree', header: 'Connections', width: 12, align: 'right' },
-                    { key: 'complexity', header: 'Complexity', width: 12, align: 'right' },
-                ],
-                data: nodesByDegree.map(n => ({
-                    path: n.path.length > 48 ? '...' + n.path.slice(-45) : n.path,
-                    degree: n.degree,
-                    complexity: n.complexity || 0,
-                })),
-            });
-            // Show circular dependencies
-            if (circularDeps.length > 0) {
-                output.writeln();
-                output.writeln(output.bold(output.warning(`Circular Dependencies: ${circularDeps.length}`)));
-                output.writeln();
-                for (const cycle of circularDeps.slice(0, 3)) {
-                    output.writeln(`  ${cycle.cycle.join(' -> ')}`);
-                }
-                if (circularDeps.length > 3) {
-                    output.writeln(output.dim(`  ... and ${circularDeps.length - 3} more`));
-                }
-            }
-            if (outputFile) {
-                const fullOutput = {
-                    nodes: Array.from(graph.nodes.values()),
-                    edges: graph.edges,
-                    metadata: graph.metadata,
-                    circularDependencies: circularDeps,
-                };
-                await writeFile(outputFile, JSON.stringify(fullOutput, null, 2));
-                output.printSuccess(`Full results written to ${outputFile}`);
-            }
-            return { success: true };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-/**
- * Detect circular dependencies
- */
-const circularCommand = {
-    name: 'circular',
-    aliases: ['cycles'],
-    description: 'Detect circular dependencies in codebase',
-    options: [
-        {
-            name: 'output',
-            short: 'o',
-            description: 'Output file path',
-            type: 'string',
-        },
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format (text, json)',
-            type: 'string',
-            default: 'text',
-            choices: ['text', 'json'],
-        },
-        {
-            name: 'severity',
-            short: 's',
-            description: 'Minimum severity to show (low, medium, high)',
-            type: 'string',
-            default: 'low',
-            choices: ['low', 'medium', 'high'],
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze circular src/', description: 'Find circular dependencies' },
-        { command: 'monomind analyze circular -s high src/', description: 'Only high severity cycles' },
-    ],
-    action: async (ctx) => {
-        const targetDir = ctx.args[0] || ctx.cwd;
-        const outputFile = ctx.flags.output;
-        const format = ctx.flags.format || 'text';
-        const minSeverity = ctx.flags.severity || 'low';
-        output.printInfo(`Detecting circular dependencies in: ${output.highlight(targetDir)}`);
-        output.writeln();
-        const spinner = output.createSpinner({ text: 'Analyzing dependencies...', spinner: 'dots' });
-        spinner.start();
-        try {
-            const analyzer = await getGraphAnalyzer();
-            if (!analyzer) {
-                spinner.stop();
-                output.printError('Graph analyzer module not available');
-                return { success: false, exitCode: 1 };
-            }
-            const graph = await analyzer.buildDependencyGraph(resolve(targetDir));
-            const cycles = analyzer.detectCircularDependencies(graph);
-            spinner.stop();
-            // Filter by severity
-            const severityOrder = { low: 0, medium: 1, high: 2 };
-            const minLevel = severityOrder[minSeverity] || 0;
-            const filtered = cycles.filter(c => severityOrder[c.severity] >= minLevel);
-            if (format === 'json') {
-                const jsonOutput = { cycles: filtered, total: cycles.length, filtered: filtered.length };
-                if (outputFile) {
-                    await writeFile(outputFile, JSON.stringify(jsonOutput, null, 2));
-                    output.printSuccess(`Results written to ${outputFile}`);
-                }
-                else {
-                    output.printJson(jsonOutput);
-                }
-                return { success: true, data: jsonOutput };
-            }
-            // Text format
-            if (filtered.length === 0) {
-                output.printSuccess('No circular dependencies found!');
-                return { success: true };
-            }
-            output.printBox([
-                `Total cycles: ${cycles.length}`,
-                `Shown (${minSeverity}+): ${filtered.length}`,
-                `High severity: ${cycles.filter(c => c.severity === 'high').length}`,
-                `Medium severity: ${cycles.filter(c => c.severity === 'medium').length}`,
-                `Low severity: ${cycles.filter(c => c.severity === 'low').length}`,
-            ].join('\n'), 'Circular Dependencies');
-            output.writeln();
-            // Group by severity
-            const grouped = {
-                high: filtered.filter(c => c.severity === 'high'),
-                medium: filtered.filter(c => c.severity === 'medium'),
-                low: filtered.filter(c => c.severity === 'low'),
-            };
-            for (const [severity, items] of Object.entries(grouped)) {
-                if (items.length === 0)
-                    continue;
-                const color = severity === 'high' ? output.error : severity === 'medium' ? output.warning : output.dim;
-                output.writeln(color(output.bold(`${severity.toUpperCase()} SEVERITY (${items.length})`)));
-                output.writeln();
-                for (const cycle of items.slice(0, 5)) {
-                    output.writeln(`  ${cycle.cycle.join(' -> ')}`);
-                    output.writeln(output.dim(`  Fix: ${cycle.suggestion}`));
-                    output.writeln();
-                }
-                if (items.length > 5) {
-                    output.writeln(output.dim(`  ... and ${items.length - 5} more ${severity} cycles`));
-                    output.writeln();
-                }
-            }
-            if (outputFile) {
-                await writeFile(outputFile, JSON.stringify({ cycles: filtered }, null, 2));
-                output.printSuccess(`Results written to ${outputFile}`);
-            }
-            return { success: true, data: { cycles: filtered } };
-        }
-        catch (error) {
-            spinner.stop();
-            const message = error instanceof Error ? error.message : String(error);
-            output.printError(`Analysis failed: ${message}`);
-            return { success: false, exitCode: 1 };
-        }
-    },
-};
-// Helper functions
-function getRiskDisplay(risk) {
-    switch (risk) {
-        case 'critical':
-            return output.color(output.bold('CRITICAL'), 'bgRed', 'white');
-        case 'high-risk':
-            return output.error('HIGH');
-        case 'medium-risk':
-            return output.warning('MEDIUM');
-        case 'low-risk':
-            return output.success('LOW');
-        default:
-            return risk;
-    }
-}
-function getStatusDisplay(status) {
-    switch (status) {
-        case 'added':
-            return output.success('A');
-        case 'modified':
-            return output.warning('M');
-        case 'deleted':
-            return output.error('D');
-        case 'renamed':
-            return output.info('R');
-        default:
-            return status;
-    }
-}
-// Main analyze command
-export const analyzeCommand = {
-    name: 'analyze',
-    description: 'Code analysis, diff classification, graph boundaries, and change risk assessment',
-    aliases: ['an'],
-    subcommands: [
-        diffCommand,
-        codeCommand,
-        depsCommand,
-        astCommand,
-        complexityAstCommand,
-        symbolsCommand,
-        importsCommand,
-        boundariesCommand,
-        modulesCommand,
-        dependenciesCommand,
-        circularCommand,
-    ],
-    options: [
-        {
-            name: 'format',
-            short: 'f',
-            description: 'Output format: text, json, table',
-            type: 'string',
-            default: 'text',
-        },
-    ],
-    examples: [
-        { command: 'monomind analyze ast src/', description: 'Analyze code with AST parsing' },
-        { command: 'monomind analyze complexity src/ --threshold 15', description: 'Find high-complexity files' },
-        { command: 'monomind analyze symbols src/ --type function', description: 'Extract all functions' },
-        { command: 'monomind analyze imports src/ --external', description: 'List npm dependencies' },
-        { command: 'monomind analyze diff --risk', description: 'Analyze diff with risk assessment' },
-        { command: 'monomind analyze boundaries src/', description: 'Find code boundaries using MinCut' },
-        { command: 'monomind analyze modules src/', description: 'Detect module communities with Louvain' },
-        { command: 'monomind analyze dependencies src/ --format dot', description: 'Export dependency graph as DOT' },
-        { command: 'monomind analyze circular src/', description: 'Find circular dependencies' },
-        { command: 'monomind analyze deps --security', description: 'Check dependency vulnerabilities' },
-    ],
-    action: async (ctx) => {
-        // If no subcommand, show help
-        output.writeln();
-        output.writeln(output.bold('Analyze Commands'));
-        output.writeln(output.dim('-'.repeat(50)));
-        output.writeln();
-        output.writeln(output.bold('Available subcommands:'));
-        output.writeln();
-        output.writeln(`  ${output.highlight('diff')}         Analyze git diff for change risk and classification`);
-        output.writeln(`  ${output.highlight('code')}         Static code analysis and quality assessment`);
-        output.writeln(`  ${output.highlight('deps')}         Analyze project dependencies`);
-        output.writeln(`  ${output.highlight('ast')}          AST analysis with symbol extraction and complexity`);
-        output.writeln(`  ${output.highlight('complexity')}   Analyze cyclomatic and cognitive complexity`);
-        output.writeln(`  ${output.highlight('symbols')}      Extract functions, classes, and types`);
-        output.writeln(`  ${output.highlight('imports')}      Analyze import dependencies`);
-        output.writeln(`  ${output.highlight('boundaries')}   Find code boundaries using MinCut algorithm`);
-        output.writeln(`  ${output.highlight('modules')}      Detect module communities using Louvain algorithm`);
-        output.writeln(`  ${output.highlight('dependencies')} Build and export full dependency graph`);
-        output.writeln(`  ${output.highlight('circular')}     Detect circular dependencies in codebase`);
-        output.writeln();
-        output.writeln(output.bold('AST Analysis Examples:'));
-        output.writeln();
-        output.writeln(`  ${output.dim('monomind analyze ast src/')}                  # Full AST analysis`);
-        output.writeln(`  ${output.dim('monomind analyze ast src/index.ts -c')}       # Include complexity`);
-        output.writeln(`  ${output.dim('monomind analyze complexity src/ -t 15')}     # Flag high complexity`);
-        output.writeln(`  ${output.dim('monomind analyze symbols src/ --type fn')}    # Extract functions`);
-        output.writeln(`  ${output.dim('monomind analyze imports src/ --external')}   # Only npm imports`);
-        output.writeln();
-        output.writeln(output.bold('Graph Analysis Examples:'));
-        output.writeln();
-        output.writeln(`  ${output.dim('monomind analyze boundaries src/')}            # Find natural code boundaries`);
-        output.writeln(`  ${output.dim('monomind analyze modules src/')}               # Detect module communities`);
-        output.writeln(`  ${output.dim('monomind analyze dependencies -f dot src/')}   # Export to DOT format`);
-        output.writeln(`  ${output.dim('monomind analyze circular src/')}              # Find circular deps`);
-        output.writeln();
-        output.writeln(output.bold('Diff Analysis Examples:'));
-        output.writeln();
-        output.writeln(`  ${output.dim('monomind analyze diff --risk')}              # Risk assessment`);
-        output.writeln(`  ${output.dim('monomind analyze diff HEAD~1 --classify')}   # Classify changes`);
-        output.writeln(`  ${output.dim('monomind analyze diff main..feature')}       # Compare branches`);
-        output.writeln();
-        return { success: true };
-    },
-};
-export default analyzeCommand;
-//# sourceMappingURL=analyze.js.map