monomind 1.18.6 → 1.18.7

package/packages/@monomind/cli/bundled-graph/dist/src/extract/semantic.js

@@ -1,242 +0,0 @@
-// ---------------------------------------------------------------------------
-// Prompt template (mirrors graphify skill.md lines 253-303)
-// ---------------------------------------------------------------------------
-function buildPrompt(files, mode, chunkNum, totalChunks) {
-    const deepInstructions = mode === 'deep'
-        ? '\nDEEP MODE: be aggressive with INFERRED edges - indirect deps, shared assumptions, latent couplings. Mark uncertain ones AMBIGUOUS instead of omitting.\n'
-        : '';
-    const fileList = files
-        .map((f) => `--- file: ${f.relPath} ---\n${f.content.slice(0, 6000)}\n---`)
-        .join('\n\n');
-    return `You are a monograph extraction subagent. Read the files listed and extract a knowledge graph fragment.
-Output ONLY valid JSON matching the schema below - no explanation, no markdown fences, no preamble.
-
-Files (chunk ${chunkNum} of ${totalChunks}):
-${fileList}
-
-Rules:
-- EXTRACTED: relationship explicit in source (import, call, citation, "see §3.2")
-- INFERRED: reasonable inference (shared data structure, implied dependency)
-- AMBIGUOUS: uncertain - flag for review, do not omit
-
-Code files: focus on semantic edges AST cannot find (call relationships, shared data, arch patterns).
-  Do not re-extract imports - AST already has those.
-Doc/paper files: extract named concepts, entities, citations. Also extract rationale — sections that explain WHY a decision was made, trade-offs chosen, or design intent. These become nodes with "rationale_for" edges pointing to the concept they explain.
-${deepInstructions}
-Semantic similarity: if two concepts in this chunk solve the same problem or represent the same idea without any structural link, add a "semantically_similar_to" edge marked INFERRED with a confidence_score reflecting how similar they are (0.6-0.95). Only add these when the similarity is genuinely non-obvious and cross-cutting.
-
-Hyperedges: if 3 or more nodes clearly participate together in a shared concept, flow, or pattern not captured by pairwise edges, add a hyperedge to the "hyperedges" array. Use sparingly — maximum 3 hyperedges per chunk.
-
-If a file has YAML frontmatter (--- ... ---), copy source_url, captured_at, author, contributor onto every node from that file.
-
-confidence_score is REQUIRED on every edge:
-- EXTRACTED edges: confidence_score = 1.0 always
-- INFERRED edges: Direct structural evidence: 0.8-0.9. Reasonable with uncertainty: 0.6-0.7. Weak/speculative: 0.4-0.5.
-- AMBIGUOUS edges: 0.1-0.3
-
-Output exactly this JSON (no other text):
-{"nodes":[{"id":"filestem_entityname","label":"Human Readable Name","file_type":"code|document|paper|image","source_file":"relative/path","source_location":null,"source_url":null,"captured_at":null,"author":null,"contributor":null}],"edges":[{"source":"node_id","target":"node_id","relation":"calls|implements|references|cites|conceptually_related_to|shares_data_with|semantically_similar_to|rationale_for","confidence":"EXTRACTED|INFERRED|AMBIGUOUS","confidence_score":1.0,"source_file":"relative/path","source_location":null,"weight":1.0}],"hyperedges":[{"id":"snake_case_id","label":"Human Readable Label","nodes":["node_id1","node_id2","node_id3"],"relation":"participate_in|implement|form","confidence":"EXTRACTED|INFERRED","confidence_score":0.75,"source_file":"relative/path"}],"input_tokens":0,"output_tokens":0}`;
-}
-async function callClaude(prompt, apiKey, model, maxTokens) {
-    const response = await fetch('https://api.anthropic.com/v1/messages', {
-        method: 'POST',
-        headers: {
-            'Content-Type': 'application/json',
-            'x-api-key': apiKey,
-            'anthropic-version': '2023-06-01',
-        },
-        body: JSON.stringify({
-            model,
-            max_tokens: maxTokens,
-            messages: [{ role: 'user', content: prompt }],
-        }),
-    });
-    if (!response.ok) {
-        const body = await response.text();
-        throw new Error(`Anthropic API error ${response.status}: ${body}`);
-    }
-    const msg = (await response.json());
-    const text = msg.content.find((c) => c.type === 'text')?.text ?? '';
-    return {
-        text,
-        inputTokens: msg.usage?.input_tokens ?? 0,
-        outputTokens: msg.usage?.output_tokens ?? 0,
-    };
-}
-function parseChunkResult(text, chunkFiles) {
-    // Strip markdown fences if model added them despite instructions
-    const cleaned = text.replace(/^```json\s*/i, '').replace(/\s*```\s*$/, '').trim();
-    let raw;
-    try {
-        raw = JSON.parse(cleaned);
-    }
-    catch {
-        return { nodes: [], edges: [], hyperedges: [], inputTokens: 0, outputTokens: 0 };
-    }
-    const fileSet = new Set(chunkFiles.map((f) => f.relPath));
-    const nodes = (raw.nodes ?? [])
-        .filter((n) => typeof n === 'object' && n !== null)
-        .map((n) => ({
-        id: String(n['id'] ?? ''),
-        label: String(n['label'] ?? n['id'] ?? ''),
-        fileType: n['file_type'] ?? 'document',
-        sourceFile: String(n['source_file'] ?? ''),
-        sourceLocation: n['source_location'] ?? undefined,
-        // Extra metadata from YAML frontmatter
-        ...(n['source_url'] ? { sourceUrl: n['source_url'] } : {}),
-        ...(n['captured_at'] ? { capturedAt: n['captured_at'] } : {}),
-        ...(n['author'] ? { author: n['author'] } : {}),
-    }))
-        .filter((n) => n.id && fileSet.has(n.sourceFile));
-    const edges = (raw.edges ?? [])
-        .filter((e) => typeof e === 'object' && e !== null)
-        .map((e) => ({
-        source: String(e['source'] ?? ''),
-        target: String(e['target'] ?? ''),
-        relation: String(e['relation'] ?? 'references'),
-        confidence: e['confidence'] ?? 'INFERRED',
-        confidenceScore: typeof e['confidence_score'] === 'number' ? e['confidence_score'] : 0.7,
-        sourceFile: e['source_file'] ?? undefined,
-        weight: typeof e['weight'] === 'number' ? e['weight'] : 1.0,
-    }))
-        .filter((e) => e.source && e.target);
-    const hyperedges = (raw.hyperedges ?? [])
-        .filter((h) => typeof h === 'object' && h !== null)
-        .map((h) => ({
-        label: String(h['label'] ?? h['id'] ?? ''),
-        nodes: Array.isArray(h['nodes']) ? h['nodes'] : [],
-        confidence: h['confidence'] ?? 'INFERRED',
-        confidenceScore: typeof h['confidence_score'] === 'number' ? h['confidence_score'] : 0.7,
-    }))
-        .filter((h) => h.label && h.nodes.length >= 2);
-    return {
-        nodes,
-        edges,
-        hyperedges,
-        inputTokens: raw.input_tokens ?? 0,
-        outputTokens: raw.output_tokens ?? 0,
-    };
-}
-// ---------------------------------------------------------------------------
-// Best-Fit Decreasing (BFD) chunk packing — from autoresearch experiment loop
-//
-// Instead of slicing files into equal-sized groups, BFD estimates the token
-// count of each file, sorts descending, and packs into bins that stay under
-// targetTokens.  This mirrors the document-packing dataloader in autoresearch
-// (best-fit + zero-waste) and produces denser, fairer prompts than fixed chunks.
-// ---------------------------------------------------------------------------
-/**
- * Pack `files` into chunks using First-Fit Decreasing bin packing.
- *
- * Each file's token estimate = min(content.length / 4, 1500)
- * (the prompt already truncates each file to 6000 chars = ~1500 tokens).
- *
- * @param files         - Files to pack
- * @param targetTokens  - Soft upper bound on tokens per chunk (default 30 000)
- * @returns             - Array of chunks; each chunk is an array of files
- */
-function packChunksBFD(files, targetTokens) {
-    // Estimate tokens per file — capped at the 6 000-char prompt truncation limit
-    const sized = files.map((f) => ({
-        file: f,
-        tokens: Math.min(Math.ceil(f.content.length / 4), 1500),
-    }));
-    // Sort descending so large files get placed first (First Fit Decreasing)
-    sized.sort((a, b) => b.tokens - a.tokens);
-    const bins = [];
-    for (const item of sized) {
-        let placed = false;
-        for (const bin of bins) {
-            if (bin.tokens + item.tokens <= targetTokens) {
-                bin.files.push(item.file);
-                bin.tokens += item.tokens;
-                placed = true;
-                break;
-            }
-        }
-        if (!placed) {
-            // File is too large (or bins are all full) — open a new bin
-            bins.push({ files: [item.file], tokens: item.tokens });
-        }
-    }
-    return bins.map((b) => b.files);
-}
-// ---------------------------------------------------------------------------
-// Main export
-// ---------------------------------------------------------------------------
-/**
- * Run semantic extraction on a set of files using the Anthropic Claude API.
- *
- * Returns an empty ExtractionResult (not an error) when:
- * - No API key is available
- * - The API call fails
- *
- * Only document/paper files benefit from semantic extraction.
- * Code files may be included but the prompt instructs Claude not to re-extract imports.
- */
-export async function extractSemantic(files, options = {}) {
-    const apiKey = options.apiKey ?? process.env['ANTHROPIC_API_KEY'] ?? '';
-    if (!apiKey) {
-        return { nodes: [], edges: [], hyperedges: [], filesProcessed: 0, fromCache: 0, errors: ['ANTHROPIC_API_KEY not set — semantic extraction skipped'] };
-    }
-    const model = options.model ?? 'claude-haiku-4-5-20251001';
-    const mode = options.mode ?? 'fast';
-    const maxTokens = options.maxTokens ?? 8192;
-    // BFD packing — targetChunkTokens defaults to 30 000 (~20 avg files × 1500 tok each).
-    // Fallback to legacy chunkSize if targetChunkTokens is not set and chunkSize was specified,
-    // so callers that relied on chunkSize still get predictable behaviour.
-    const targetChunkTokens = options.targetChunkTokens
-        ?? (options.chunkSize ? options.chunkSize * 1500 : 30_000);
-    // Time budget — undefined = no limit (run all chunks)
-    const deadline = options.timeBudget ? Date.now() + options.timeBudget : Infinity;
-    const allNodes = [];
-    const allEdges = [];
-    const allHyperedges = [];
-    const errors = [];
-    let totalInput = 0;
-    let totalOutput = 0;
-    // Pack files into token-aware chunks using BFD (replaces fixed equal-size slicing)
-    const chunks = packChunksBFD(files, targetChunkTokens);
-    for (let i = 0; i < chunks.length; i++) {
-        // Time budget enforcement — mirrors autoresearch's 5-min wall-clock limit
-        if (Date.now() > deadline) {
-            errors.push(`Time budget (${options.timeBudget}ms) exceeded after chunk ${i}/${chunks.length} — partial results returned`);
-            break;
-        }
-        const chunk = chunks[i];
-        const prompt = buildPrompt(chunk, mode, i + 1, chunks.length);
-        try {
-            const { text, inputTokens, outputTokens } = await callClaude(prompt, apiKey, model, maxTokens);
-            totalInput += inputTokens;
-            totalOutput += outputTokens;
-            const parsed = parseChunkResult(text, chunk);
-            allNodes.push(...parsed.nodes);
-            allEdges.push(...parsed.edges);
-            allHyperedges.push(...parsed.hyperedges);
-        }
-        catch (err) {
-            errors.push(`Chunk ${i + 1}/${chunks.length} failed: ${err instanceof Error ? err.message : String(err)}`);
-        }
-    }
-    // Deduplicate nodes by id
-    const seenNodeIds = new Set();
-    const dedupedNodes = allNodes.filter((n) => {
-        if (seenNodeIds.has(n.id))
-            return false;
-        seenNodeIds.add(n.id);
-        return true;
-    });
-    // Attach token totals as extra fields for report generation
-    const result = {
-        nodes: dedupedNodes,
-        edges: allEdges,
-        hyperedges: allHyperedges,
-        filesProcessed: files.length,
-        fromCache: 0,
-        errors,
-        inputTokens: totalInput,
-        outputTokens: totalOutput,
-    };
-    return result;
-}
-//# sourceMappingURL=semantic.js.map

package/packages/@monomind/cli/bundled-graph/dist/src/extract/semantic.js.map

@@ -1 +0,0 @@
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package/packages/@monomind/cli/bundled-graph/dist/src/extract/tree-sitter-runner.d.ts

@@ -1,50 +0,0 @@
-import type { ExtractionResult } from '../types.js';
-import type { LanguageExtractor } from './types.js';
-type ParserInstance = {
-    setLanguage(lang: unknown): void;
-    parse(src: string): {
-        rootNode: SyntaxNodeLike;
-    };
-};
-export type SyntaxNodeLike = {
-    type: string;
-    text: string;
-    startPosition: {
-        row: number;
-        column: number;
-    };
-    endPosition: {
-        row: number;
-        column: number;
-    };
-    children: SyntaxNodeLike[];
-    childForFieldName(name: string): SyntaxNodeLike | null;
-    descendantsOfType(type: string | string[]): SyntaxNodeLike[];
-};
-/**
- * Returns true when the 'tree-sitter' native binding is installed and loadable.
- */
-export declare function isTreeSitterAvailable(): boolean;
-/**
- * Attempts to create a configured Parser for the given language identifier.
- * Returns null when tree-sitter or the grammar is not installed.
- */
-export declare function tryLoadParser(language: string): ParserInstance | null;
-export declare function walk(node: SyntaxNodeLike, visitor: (n: SyntaxNodeLike) => void, 
-/** Optional leave callback — called after all children have been visited. */
-leave?: (n: SyntaxNodeLike) => void): void;
-/**
- * Parses a source file and delegates to the given LanguageExtractor.
- * The extractor receives the file path and raw content; it owns the AST
- * traversal internally (using tryLoadParser / walk from this module).
- *
- * Falls back gracefully: if tree-sitter cannot be loaded the extractor is still
- * called with the raw content and is expected to use its regex fallback.
- */
-export declare function parseFile(filePath: string, content: string, extractor: LanguageExtractor): ExtractionResult;
-/**
- * Convenience helper: read a file from disk and parse it.
- */
-export declare function parseFileFromDisk(filePath: string, extractor: LanguageExtractor): ExtractionResult;
-export {};
-//# sourceMappingURL=tree-sitter-runner.d.ts.map

package/packages/@monomind/cli/bundled-graph/dist/src/extract/tree-sitter-runner.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"tree-sitter-runner.d.ts","sourceRoot":"","sources":["../../../src/extract/tree-sitter-runner.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AACpD,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,YAAY,CAAC;AAIpD,KAAK,cAAc,GAAG;IACpB,WAAW,CAAC,IAAI,EAAE,OAAO,GAAG,IAAI,CAAC;IACjC,KAAK,CAAC,GAAG,EAAE,MAAM,GAAG;QAAE,QAAQ,EAAE,cAAc,CAAA;KAAE,CAAC;CAClD,CAAC;AAEF,MAAM,MAAM,cAAc,GAAG;IAC3B,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,aAAa,EAAE;QAAE,GAAG,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;IAC/C,WAAW,EAAE;QAAE,GAAG,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;IAC7C,QAAQ,EAAE,cAAc,EAAE,CAAC;IAC3B,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,cAAc,GAAG,IAAI,CAAC;IACvD,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,EAAE,GAAG,cAAc,EAAE,CAAC;CAC9D,CAAC;AA4BF;;GAEG;AACH,wBAAgB,qBAAqB,IAAI,OAAO,CAG/C;AAuBD;;;GAGG;AACH,wBAAgB,aAAa,CAAC,QAAQ,EAAE,MAAM,GAAG,cAAc,GAAG,IAAI,CA2BrE;AAID,wBAAgB,IAAI,CAClB,IAAI,EAAE,cAAc,EACpB,OAAO,EAAE,CAAC,CAAC,EAAE,cAAc,KAAK,IAAI;AACpC,6EAA6E;AAC7E,KAAK,CAAC,EAAE,CAAC,CAAC,EAAE,cAAc,KAAK,IAAI,GAClC,IAAI,CAMN;AAID;;;;;;;GAOG;AACH,wBAAgB,SAAS,CACvB,QAAQ,EAAE,MAAM,EAChB,OAAO,EAAE,MAAM,EACf,SAAS,EAAE,iBAAiB,GAC3B,gBAAgB,CAclB;AAED;;GAEG;AACH,wBAAgB,iBAAiB,CAC/B,QAAQ,EAAE,MAAM,EAChB,SAAS,EAAE,iBAAiB,GAC3B,gBAAgB,CAgBlB"}

package/packages/@monomind/cli/bundled-graph/dist/src/extract/tree-sitter-runner.js

@@ -1,140 +0,0 @@
-import { readFileSync } from 'fs';
-// ---- availability probe ----
-let _treeSitterAvailable = null;
-let _ParserCtor = null;
-function probeTreeSitter() {
-    if (_treeSitterAvailable !== null)
-        return;
-    try {
-        // eslint-disable-next-line @typescript-eslint/no-var-requires
-        const mod = require('tree-sitter');
-        const ctor = mod.default !== undefined
-            ? mod.default
-            : mod;
-        if (typeof ctor === 'function') {
-            _ParserCtor = ctor;
-            _treeSitterAvailable = true;
-        }
-        else {
-            _treeSitterAvailable = false;
-        }
-    }
-    catch {
-        _treeSitterAvailable = false;
-    }
-}
-/**
- * Returns true when the 'tree-sitter' native binding is installed and loadable.
- */
-export function isTreeSitterAvailable() {
-    probeTreeSitter();
-    return _treeSitterAvailable === true;
-}
-// ---- language grammar loader ----
-const LANGUAGE_MODULE_MAP = {
-    typescript: 'tree-sitter-typescript',
-    tsx: 'tree-sitter-typescript',
-    javascript: 'tree-sitter-javascript',
-    jsx: 'tree-sitter-javascript',
-    python: 'tree-sitter-python',
-    go: 'tree-sitter-go',
-    rust: 'tree-sitter-rust',
-    java: 'tree-sitter-java',
-    c: 'tree-sitter-c',
-    cpp: 'tree-sitter-cpp',
-    csharp: 'tree-sitter-c-sharp',
-    ruby: 'tree-sitter-ruby',
-    kotlin: 'tree-sitter-kotlin',
-    swift: 'tree-sitter-swift',
-    scala: 'tree-sitter-scala',
-    php: 'tree-sitter-php',
-};
-/**
- * Attempts to create a configured Parser for the given language identifier.
- * Returns null when tree-sitter or the grammar is not installed.
- */
-export function tryLoadParser(language) {
-    if (!isTreeSitterAvailable() || _ParserCtor === null)
-        return null;
-    const moduleName = LANGUAGE_MODULE_MAP[language];
-    if (!moduleName)
-        return null;
-    try {
-        // eslint-disable-next-line @typescript-eslint/no-var-requires
-        const grammarMod = require(moduleName);
-        // tree-sitter-typescript exposes { typescript, tsx } sub-grammars
-        let grammar;
-        if (language === 'typescript' || language === 'tsx') {
-            grammar =
-                grammarMod[language] ??
-                    grammarMod['default'] ??
-                    grammarMod;
-        }
-        else {
-            grammar = grammarMod['default'] ?? grammarMod;
-        }
-        const parser = new _ParserCtor();
-        parser.setLanguage(grammar);
-        return parser;
-    }
-    catch {
-        return null;
-    }
-}
-// ---- depth-first AST walker ----
-export function walk(node, visitor, 
-/** Optional leave callback — called after all children have been visited. */
-leave) {
-    visitor(node);
-    for (const child of node.children) {
-        walk(child, visitor, leave);
-    }
-    leave?.(node);
-}
-// ---- main entry point ----
-/**
- * Parses a source file and delegates to the given LanguageExtractor.
- * The extractor receives the file path and raw content; it owns the AST
- * traversal internally (using tryLoadParser / walk from this module).
- *
- * Falls back gracefully: if tree-sitter cannot be loaded the extractor is still
- * called with the raw content and is expected to use its regex fallback.
- */
-export function parseFile(filePath, content, extractor) {
-    try {
-        return extractor.extract(filePath, content);
-    }
-    catch (err) {
-        return {
-            nodes: [],
-            edges: [],
-            filesProcessed: 1,
-            fromCache: 0,
-            errors: [
-                `parseFile error for ${filePath}: ${err instanceof Error ? err.message : String(err)}`,
-            ],
-        };
-    }
-}
-/**
- * Convenience helper: read a file from disk and parse it.
- */
-export function parseFileFromDisk(filePath, extractor) {
-    let content;
-    try {
-        content = readFileSync(filePath, 'utf8');
-    }
-    catch (err) {
-        return {
-            nodes: [],
-            edges: [],
-            filesProcessed: 1,
-            fromCache: 0,
-            errors: [
-                `Failed to read ${filePath}: ${err instanceof Error ? err.message : String(err)}`,
-            ],
-        };
-    }
-    return parseFile(filePath, content, extractor);
-}
-//# sourceMappingURL=tree-sitter-runner.js.map

package/packages/@monomind/cli/bundled-graph/dist/src/extract/tree-sitter-runner.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"tree-sitter-runner.js","sourceRoot":"","sources":["../../../src/extract/tree-sitter-runner.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,MAAM,IAAI,CAAC;AAqBlC,+BAA+B;AAE/B,IAAI,oBAAoB,GAAmB,IAAI,CAAC;AAChD,IAAI,WAAW,GAAsC,IAAI,CAAC;AAE1D,SAAS,eAAe;IACtB,IAAI,oBAAoB,KAAK,IAAI;QAAE,OAAO;IAE1C,IAAI,CAAC;QACH,8DAA8D;QAC9D,MAAM,GAAG,GAAG,OAAO,CAAC,aAAa,CAAoC,CAAC;QACtE,MAAM,IAAI,GACP,GAA6B,CAAC,OAAO,KAAK,SAAS;YAClD,CAAC,CAAE,GAA4B,CAAC,OAAO;YACvC,CAAC,CAAC,GAAG,CAAC;QACV,IAAI,OAAO,IAAI,KAAK,UAAU,EAAE,CAAC;YAC/B,WAAW,GAAG,IAAgC,CAAC;YAC/C,oBAAoB,GAAG,IAAI,CAAC;QAC9B,CAAC;aAAM,CAAC;YACN,oBAAoB,GAAG,KAAK,CAAC;QAC/B,CAAC;IACH,CAAC;IAAC,MAAM,CAAC;QACP,oBAAoB,GAAG,KAAK,CAAC;IAC/B,CAAC;AACH,CAAC;AAED;;GAEG;AACH,MAAM,UAAU,qBAAqB;IACnC,eAAe,EAAE,CAAC;IAClB,OAAO,oBAAoB,KAAK,IAAI,CAAC;AACvC,CAAC;AAED,oCAAoC;AAEpC,MAAM,mBAAmB,GAA2B;IAClD,UAAU,EAAE,wBAAwB;IACpC,GAAG,EAAE,wBAAwB;IAC7B,UAAU,EAAE,wBAAwB;IACpC,GAAG,EAAE,wBAAwB;IAC7B,MAAM,EAAE,oBAAoB;IAC5B,EAAE,EAAE,gBAAgB;IACpB,IAAI,EAAE,kBAAkB;IACxB,IAAI,EAAE,kBAAkB;IACxB,CAAC,EAAE,eAAe;IAClB,GAAG,EAAE,iBAAiB;IACtB,MAAM,EAAE,qBAAqB;IAC7B,IAAI,EAAE,kBAAkB;IACxB,MAAM,EAAE,oBAAoB;IAC5B,KAAK,EAAE,mBAAmB;IAC1B,KAAK,EAAE,mBAAmB;IAC1B,GAAG,EAAE,iBAAiB;CACvB,CAAC;AAEF;;;GAGG;AACH,MAAM,UAAU,aAAa,CAAC,QAAgB;IAC5C,IAAI,CAAC,qBAAqB,EAAE,IAAI,WAAW,KAAK,IAAI;QAAE,OAAO,IAAI,CAAC;IAElE,MAAM,UAAU,GAAG,mBAAmB,CAAC,QAAQ,CAAC,CAAC;IACjD,IAAI,CAAC,UAAU;QAAE,OAAO,IAAI,CAAC;IAE7B,IAAI,CAAC;QACH,8DAA8D;QAC9D,MAAM,UAAU,GAAG,OAAO,CAAC,UAAU,CAA4B,CAAC;QAElE,kEAAkE;QAClE,IAAI,OAAgB,CAAC;QACrB,IAAI,QAAQ,KAAK,YAAY,IAAI,QAAQ,KAAK,KAAK,EAAE,CAAC;YACpD,OAAO;gBACJ,UAAsD,CAAC,QAAQ,CAAC;oBACjE,UAAU,CAAC,SAAS,CAAC;oBACrB,UAAU,CAAC;QACf,CAAC;aAAM,CAAC;YACN,OAAO,GAAG,UAAU,CAAC,SAAS,CAAC,IAAI,UAAU,CAAC;QAChD,CAAC;QAED,MAAM,MAAM,GAAG,IAAI,WAAY,EAAE,CAAC;QAClC,MAAM,CAAC,WAAW,CAAC,OAAO,CAAC,CAAC;QAC5B,OAAO,MAAM,CAAC;IAChB,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,IAAI,CAAC;IACd,CAAC;AACH,CAAC;AAED,mCAAmC;AAEnC,MAAM,UAAU,IAAI,CAClB,IAAoB,EACpB,OAAoC;AACpC,6EAA6E;AAC7E,KAAmC;IAEnC,OAAO,CAAC,IAAI,CAAC,CAAC;IACd,KAAK,MAAM,KAAK,IAAI,IAAI,CAAC,QAAQ,EAAE,CAAC;QAClC,IAAI,CAAC,KAAK,EAAE,OAAO,EAAE,KAAK,CAAC,CAAC;IAC9B,CAAC;IACD,KAAK,EAAE,CAAC,IAAI,CAAC,CAAC;AAChB,CAAC;AAED,6BAA6B;AAE7B;;;;;;;GAOG;AACH,MAAM,UAAU,SAAS,CACvB,QAAgB,EAChB,OAAe,EACf,SAA4B;IAE5B,IAAI,CAAC;QACH,OAAO,SAAS,CAAC,OAAO,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC;IAC9C,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,OAAO;YACL,KAAK,EAAE,EAAE;YACT,KAAK,EAAE,EAAE;YACT,cAAc,EAAE,CAAC;YACjB,SAAS,EAAE,CAAC;YACZ,MAAM,EAAE;gBACN,uBAAuB,QAAQ,KAAK,GAAG,YAAY,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE;aACvF;SACF,CAAC;IACJ,CAAC;AACH,CAAC;AAED;;GAEG;AACH,MAAM,UAAU,iBAAiB,CAC/B,QAAgB,EAChB,SAA4B;IAE5B,IAAI,OAAe,CAAC;IACpB,IAAI,CAAC;QACH,OAAO,GAAG,YAAY,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC;IAC3C,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,OAAO;YACL,KAAK,EAAE,EAAE;YACT,KAAK,EAAE,EAAE;YACT,cAAc,EAAE,CAAC;YACjB,SAAS,EAAE,CAAC;YACZ,MAAM,EAAE;gBACN,kBAAkB,QAAQ,KAAK,GAAG,YAAY,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE;aAClF;SACF,CAAC;IACJ,CAAC;IACD,OAAO,SAAS,CAAC,QAAQ,EAAE,OAAO,EAAE,SAAS,CAAC,CAAC;AACjD,CAAC"}

package/packages/@monomind/cli/bundled-graph/dist/src/extract/types.d.ts

@@ -1,7 +0,0 @@
-import type { ExtractionResult } from '../types.js';
-export interface LanguageExtractor {
-    language: string;
-    extensions: string[];
-    extract(filePath: string, content: string): ExtractionResult;
-}
-//# sourceMappingURL=types.d.ts.map

package/packages/@monomind/cli/bundled-graph/dist/src/extract/types.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../src/extract/types.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAEpD,MAAM,WAAW,iBAAiB;IAChC,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,OAAO,CAAC,QAAQ,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,GAAG,gBAAgB,CAAC;CAC9D"}

package/packages/@monomind/cli/bundled-graph/dist/src/extract/types.js

@@ -1,2 +0,0 @@
-export {};
-//# sourceMappingURL=types.js.map

package/packages/@monomind/cli/bundled-graph/dist/src/extract/types.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"types.js","sourceRoot":"","sources":["../../../src/extract/types.ts"],"names":[],"mappings":""}

package/packages/@monomind/cli/bundled-graph/dist/src/index.d.ts

@@ -1,28 +0,0 @@
-export { buildGraph } from './pipeline.js';
-export { FileCache } from './cache.js';
-export { collectFiles, loadIgnorePatterns, corpusHealth } from './detect.js';
-export { buildGraph as buildGraphologyGraph } from './build.js';
-export { detectCommunities, cohesionScore, splitOversizedCommunities } from './cluster.js';
-export { buildAnalysis, godNodes, surprisingConnections, graphStats, suggestQuestions, graphDiff } from './analyze.js';
-export { saveGraph, loadGraph, graphExists, getGraphPath } from './export.js';
-export { exportHTML } from './visualize.js';
-export { generateReport } from './report.js';
-export { extractSemantic } from './extract/semantic.js';
-export type { SemanticFile, SemanticOptions } from './extract/semantic.js';
-export { isTreeSitterAvailable, tryLoadParser, parseFile, parseFileFromDisk } from './extract/tree-sitter-runner.js';
-export type { LanguageExtractor } from './extract/types.js';
-export { typescriptExtractor } from './extract/languages/typescript.js';
-export { pythonExtractor } from './extract/languages/python.js';
-export { goExtractor } from './extract/languages/go.js';
-export { rustExtractor } from './extract/languages/rust.js';
-export { javaExtractor } from './extract/languages/java.js';
-export { cExtractor } from './extract/languages/c.js';
-export { cppExtractor } from './extract/languages/cpp.js';
-export { csharpExtractor } from './extract/languages/csharp.js';
-export { rubyExtractor } from './extract/languages/ruby.js';
-export { kotlinExtractor } from './extract/languages/kotlin.js';
-export { swiftExtractor } from './extract/languages/swift.js';
-export { scalaExtractor } from './extract/languages/scala.js';
-export { phpExtractor } from './extract/languages/php.js';
-export type * from './types.js';
-//# sourceMappingURL=index.d.ts.map

package/packages/@monomind/cli/bundled-graph/dist/src/index.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAC3C,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AACvC,OAAO,EAAE,YAAY,EAAE,kBAAkB,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAC7E,OAAO,EAAE,UAAU,IAAI,oBAAoB,EAAE,MAAM,YAAY,CAAC;AAChE,OAAO,EAAE,iBAAiB,EAAE,aAAa,EAAE,yBAAyB,EAAE,MAAM,cAAc,CAAC;AAC3F,OAAO,EAAE,aAAa,EAAE,QAAQ,EAAE,qBAAqB,EAAE,UAAU,EAAE,gBAAgB,EAAE,SAAS,EAAE,MAAM,cAAc,CAAC;AACvH,OAAO,EAAE,SAAS,EAAE,SAAS,EAAE,WAAW,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAC9E,OAAO,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AAC5C,OAAO,EAAE,cAAc,EAAE,MAAM,aAAa,CAAC;AAC7C,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AACxD,YAAY,EAAE,YAAY,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AAC3E,OAAO,EAAE,qBAAqB,EAAE,aAAa,EAAE,SAAS,EAAE,iBAAiB,EAAE,MAAM,iCAAiC,CAAC;AACrH,YAAY,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAC;AAE5D,OAAO,EAAE,mBAAmB,EAAE,MAAM,mCAAmC,CAAC;AACxE,OAAO,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AAChE,OAAO,EAAE,WAAW,EAAE,MAAM,2BAA2B,CAAC;AACxD,OAAO,EAAE,aAAa,EAAE,MAAM,6BAA6B,CAAC;AAC5D,OAAO,EAAE,aAAa,EAAE,MAAM,6BAA6B,CAAC;AAC5D,OAAO,EAAE,UAAU,EAAE,MAAM,0BAA0B,CAAC;AACtD,OAAO,EAAE,YAAY,EAAE,MAAM,4BAA4B,CAAC;AAC1D,OAAO,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AAChE,OAAO,EAAE,aAAa,EAAE,MAAM,6BAA6B,CAAC;AAC5D,OAAO,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AAChE,OAAO,EAAE,cAAc,EAAE,MAAM,8BAA8B,CAAC;AAC9D,OAAO,EAAE,cAAc,EAAE,MAAM,8BAA8B,CAAC;AAC9D,OAAO,EAAE,YAAY,EAAE,MAAM,4BAA4B,CAAC;AAC1D,mBAAmB,YAAY,CAAC"}

package/packages/@monomind/cli/bundled-graph/dist/src/index.js

@@ -1,26 +0,0 @@
-export { buildGraph } from './pipeline.js';
-export { FileCache } from './cache.js';
-export { collectFiles, loadIgnorePatterns, corpusHealth } from './detect.js';
-export { buildGraph as buildGraphologyGraph } from './build.js';
-export { detectCommunities, cohesionScore, splitOversizedCommunities } from './cluster.js';
-export { buildAnalysis, godNodes, surprisingConnections, graphStats, suggestQuestions, graphDiff } from './analyze.js';
-export { saveGraph, loadGraph, graphExists, getGraphPath } from './export.js';
-export { exportHTML } from './visualize.js';
-export { generateReport } from './report.js';
-export { extractSemantic } from './extract/semantic.js';
-export { isTreeSitterAvailable, tryLoadParser, parseFile, parseFileFromDisk } from './extract/tree-sitter-runner.js';
-// Language extractors
-export { typescriptExtractor } from './extract/languages/typescript.js';
-export { pythonExtractor } from './extract/languages/python.js';
-export { goExtractor } from './extract/languages/go.js';
-export { rustExtractor } from './extract/languages/rust.js';
-export { javaExtractor } from './extract/languages/java.js';
-export { cExtractor } from './extract/languages/c.js';
-export { cppExtractor } from './extract/languages/cpp.js';
-export { csharpExtractor } from './extract/languages/csharp.js';
-export { rubyExtractor } from './extract/languages/ruby.js';
-export { kotlinExtractor } from './extract/languages/kotlin.js';
-export { swiftExtractor } from './extract/languages/swift.js';
-export { scalaExtractor } from './extract/languages/scala.js';
-export { phpExtractor } from './extract/languages/php.js';
-//# sourceMappingURL=index.js.map

package/packages/@monomind/cli/bundled-graph/dist/src/index.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAC3C,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AACvC,OAAO,EAAE,YAAY,EAAE,kBAAkB,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAC7E,OAAO,EAAE,UAAU,IAAI,oBAAoB,EAAE,MAAM,YAAY,CAAC;AAChE,OAAO,EAAE,iBAAiB,EAAE,aAAa,EAAE,yBAAyB,EAAE,MAAM,cAAc,CAAC;AAC3F,OAAO,EAAE,aAAa,EAAE,QAAQ,EAAE,qBAAqB,EAAE,UAAU,EAAE,gBAAgB,EAAE,SAAS,EAAE,MAAM,cAAc,CAAC;AACvH,OAAO,EAAE,SAAS,EAAE,SAAS,EAAE,WAAW,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAC9E,OAAO,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AAC5C,OAAO,EAAE,cAAc,EAAE,MAAM,aAAa,CAAC;AAC7C,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AAExD,OAAO,EAAE,qBAAqB,EAAE,aAAa,EAAE,SAAS,EAAE,iBAAiB,EAAE,MAAM,iCAAiC,CAAC;AAErH,sBAAsB;AACtB,OAAO,EAAE,mBAAmB,EAAE,MAAM,mCAAmC,CAAC;AACxE,OAAO,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AAChE,OAAO,EAAE,WAAW,EAAE,MAAM,2BAA2B,CAAC;AACxD,OAAO,EAAE,aAAa,EAAE,MAAM,6BAA6B,CAAC;AAC5D,OAAO,EAAE,aAAa,EAAE,MAAM,6BAA6B,CAAC;AAC5D,OAAO,EAAE,UAAU,EAAE,MAAM,0BAA0B,CAAC;AACtD,OAAO,EAAE,YAAY,EAAE,MAAM,4BAA4B,CAAC;AAC1D,OAAO,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AAChE,OAAO,EAAE,aAAa,EAAE,MAAM,6BAA6B,CAAC;AAC5D,OAAO,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AAChE,OAAO,EAAE,cAAc,EAAE,MAAM,8BAA8B,CAAC;AAC9D,OAAO,EAAE,cAAc,EAAE,MAAM,8BAA8B,CAAC;AAC9D,OAAO,EAAE,YAAY,EAAE,MAAM,4BAA4B,CAAC"}

package/packages/@monomind/cli/bundled-graph/dist/src/pipeline.d.ts

@@ -1,27 +0,0 @@
-import type { BuildOptions, GraphAnalysis, SerializedGraph, GraphQuestion } from './types.js';
-/**
- * Main entry point for building a knowledge graph from a codebase.
- *
- * Orchestrates file collection, per-file extraction (with caching),
- * graph construction via graphology, community detection, and serialisation.
- *
- * @param projectPath - Absolute path to the root of the codebase to analyse.
- * @param options     - Optional build configuration.
- * @returns           - Serialized graph + analysis summary.
- */
-export interface BuildResult {
-    graph: SerializedGraph;
-    analysis: GraphAnalysis;
-    questions: GraphQuestion[];
-    corpusWarnings: string[];
-    filesProcessed: number;
-    fromCache: number;
-    graphPath: string;
-    reportPath: string;
-    /** Graph quality scalar: avgCohesion × ln(1 + avgDegree). Higher is better. */
-    graphQuality: number;
-    /** Experiment loop status — mirrors autoresearch's keep/discard protocol. */
-    experimentStatus: 'BASELINE' | 'KEEP' | 'DISCARD';
-}
-export declare function buildGraph(projectPath: string, options?: BuildOptions): Promise<BuildResult>;
-//# sourceMappingURL=pipeline.d.ts.map

package/packages/@monomind/cli/bundled-graph/dist/src/pipeline.d.ts.map

@@ -1 +0,0 @@
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