monomind 1.10.1 → 1.10.2

package/packages/@monomind/cli/dist/src/init/claudemd-generator.js

@@ -0,0 +1,558 @@
+/**
+ * CLAUDE.md Generator
+ * Generates enforceable, analyzer-optimized Claude Code configuration
+ * with template variants for different usage patterns.
+ *
+ * Templates: minimal | standard | full | security | performance | solo
+ * All templates use bullet-format rules with imperative keywords for enforceability.
+ */
+// --- Section Generators (each returns enforceable markdown) ---
+function behavioralRules() {
+    return `## Behavioral Rules (Always Enforced)
+
+- Do what has been asked; nothing more, nothing less
+- NEVER create files unless they're absolutely necessary for achieving your goal
+- ALWAYS prefer editing an existing file to creating a new one
+- NEVER proactively create documentation files (*.md) or README files unless explicitly requested
+- NEVER save working files, text/mds, or tests to the root folder
+- Never continuously check status after spawning a swarm — wait for results
+- ALWAYS read a file before editing it
+- NEVER commit secrets, credentials, or .env files`;
+}
+function codingPrinciples() {
+    return `## Coding Principles
+
+### Think Before Coding
+- State assumptions explicitly. If uncertain, ask.
+- If multiple interpretations exist, present them — don't pick silently.
+- If a simpler approach exists, say so. Push back when warranted.
+- If something is unclear, stop. Name what's confusing. Ask.
+
+### Simplicity First
+- No features beyond what was asked.
+- No abstractions for single-use code.
+- No "flexibility" or "configurability" that wasn't requested.
+- No error handling for impossible scenarios.
+- If you write 200 lines and it could be 50, rewrite it.
+
+### Surgical Changes
+- Don't "improve" adjacent code, comments, or formatting.
+- Don't refactor things that aren't broken.
+- Match existing style, even if you'd do it differently.
+- Remove imports/variables/functions that YOUR changes made unused.
+- Don't remove pre-existing dead code unless asked.
+- Every changed line should trace directly to the user's request.
+
+### Goal-Driven Execution
+- Transform tasks into verifiable goals with success criteria.
+- "Add validation" → "Write tests for invalid inputs, then make them pass"
+- "Fix the bug" → "Write a test that reproduces it, then make it pass"
+- For multi-step tasks, state a brief plan with verification steps.`;
+}
+function fileOrganization() {
+    return `## File Organization
+
+- NEVER save to root folder — use the directories below
+- Use \`/src\` for source code files
+- Use \`/tests\` for test files
+- Use \`/docs\` for documentation and markdown files
+- Use \`/config\` for configuration files
+- Use \`/scripts\` for utility scripts
+- Use \`/examples\` for example code`;
+}
+function projectArchitecture(options) {
+    return `## Project Architecture
+
+- Follow Domain-Driven Design with bounded contexts
+- Keep files under 500 lines
+- Use typed interfaces for all public APIs
+- Prefer TDD London School (mock-first) for new code
+- Use event sourcing for state changes
+- Ensure input validation at system boundaries
+
+### Project Config
+
+- **Topology**: ${options.runtime.topology}
+- **Max Agents**: ${options.runtime.maxAgents}
+- **Memory**: ${options.runtime.memoryBackend}
+- **HNSW**: ${options.runtime.enableHNSW ? 'Enabled' : 'Disabled'}
+- **Neural**: ${options.runtime.enableNeural ? 'Enabled' : 'Disabled'}`;
+}
+function concurrencyRules() {
+    return `## Concurrency: 1 MESSAGE = ALL RELATED OPERATIONS
+
+- All operations MUST be concurrent/parallel in a single message
+- Use Claude Code's Task tool for spawning agents, not just MCP
+- ALWAYS batch ALL todos in ONE TodoWrite call (5-10+ minimum)
+- ALWAYS spawn ALL agents in ONE message with full instructions via Task tool
+- ALWAYS batch ALL file reads/writes/edits in ONE message
+- ALWAYS batch ALL Bash commands in ONE message`;
+}
+function swarmOrchestration() {
+    return `## Swarm Orchestration
+
+- MUST initialize the swarm using CLI tools when starting complex tasks
+- MUST spawn concurrent agents using Claude Code's Task tool
+- Never use CLI tools alone for execution — Task tool agents do the actual work
+- MUST call CLI tools AND Task tool in ONE message for complex work
+
+### 3-Tier Model Routing (ADR-026)
+
+| Tier | Handler | Latency | Cost | Use Cases |
+|------|---------|---------|------|-----------|
+| **1** | Agent Booster (WASM) | <1ms | $0 | Simple transforms (var→const, add types) — Skip LLM |
+| **2** | Haiku | ~500ms | $0.0002 | Simple tasks, low complexity (<30%) |
+| **3** | Sonnet/Opus | 2-5s | $0.003-0.015 | Complex reasoning, architecture, security (>30%) |
+
+- Always check for \`[AGENT_BOOSTER_AVAILABLE]\` or \`[TASK_MODEL_RECOMMENDATION]\` before spawning agents
+- Use Edit tool directly when \`[AGENT_BOOSTER_AVAILABLE]\``;
+}
+function antiDriftConfig() {
+    return `## Swarm Configuration & Anti-Drift
+
+- ALWAYS use hierarchical topology for coding swarms
+- Keep maxAgents at 6-8 for tight coordination
+- Use specialized strategy for clear role boundaries
+- Use \`raft\` consensus for hive-mind (leader maintains authoritative state)
+- Run frequent checkpoints via \`post-task\` hooks
+- Keep shared memory namespace for all agents
+
+\`\`\`bash
+npx monomind@latest swarm init --topology hierarchical --max-agents 8 --strategy specialized
+\`\`\``;
+}
+function autoStartProtocol() {
+    return `## Swarm Protocols & Routing
+
+### Auto-Start Swarm Protocol
+
+When the user requests a complex task, spawn agents in background and WAIT:
+
+\`\`\`javascript
+// STEP 1: Initialize swarm coordination
+Bash("npx monomind@latest swarm init --topology hierarchical --max-agents 8 --strategy specialized")
+
+// STEP 2: Spawn ALL agents IN BACKGROUND in a SINGLE message
+Task({prompt: "Research requirements...", subagent_type: "researcher", run_in_background: true})
+Task({prompt: "Design architecture...", subagent_type: "system-architect", run_in_background: true})
+Task({prompt: "Implement solution...", subagent_type: "coder", run_in_background: true})
+Task({prompt: "Write tests...", subagent_type: "tester", run_in_background: true})
+Task({prompt: "Review code quality...", subagent_type: "reviewer", run_in_background: true})
+\`\`\`
+
+### Agent Routing
+
+| Code | Task | Agents |
+|------|------|--------|
+| 1 | Bug Fix | coordinator, researcher, coder, tester |
+| 3 | Feature | coordinator, architect, coder, tester, reviewer |
+| 5 | Refactor | coordinator, architect, coder, reviewer |
+| 7 | Performance | coordinator, perf-engineer, coder |
+| 9 | Security | coordinator, security-architect, auditor |
+
+### Task Complexity Detection
+
+- AUTO-INVOKE SWARM when task involves: 3+ files, new features, cross-module refactoring, API changes, security, or performance work
+- SKIP SWARM for: single file edits, simple bug fixes (1-2 lines), documentation updates, configuration changes`;
+}
+function executionRules() {
+    return `## Swarm Execution Rules
+
+- ALWAYS use \`run_in_background: true\` for all agent Task calls
+- ALWAYS put ALL agent Task calls in ONE message for parallel execution
+- After spawning, STOP — do NOT add more tool calls or check status
+- Never poll TaskOutput or check swarm status — trust agents to return
+- When agent results arrive, review ALL results before proceeding`;
+}
+function cliCommandsTable() {
+    return `## V1 CLI Commands
+
+### Core Commands
+
+| Command | Subcommands | Description |
+|---------|-------------|-------------|
+| \`init\` | 4 | Project initialization |
+| \`agent\` | 8 | Agent lifecycle management |
+| \`swarm\` | 6 | Multi-agent swarm coordination |
+| \`memory\` | 11 | AgentDB memory with HNSW search |
+| \`task\` | 6 | Task creation and lifecycle |
+| \`session\` | 7 | Session state management |
+| \`hooks\` | 17 | Self-learning hooks + 12 workers |
+| \`hive-mind\` | 6 | Byzantine fault-tolerant consensus |
+
+### Quick CLI Examples
+
+\`\`\`bash
+npx monomind@latest init --wizard
+npx monomind@latest agent spawn -t coder --name my-coder
+npx monomind@latest swarm init --v1-mode
+npx monomind@latest memory search --query "authentication patterns"
+npx monomind@latest doctor --fix
+\`\`\``;
+}
+function agentTypes() {
+    return `## Available Agents (60+ Types)
+
+### Core Development
+\`coder\`, \`reviewer\`, \`tester\`, \`planner\`, \`researcher\`
+
+### Specialized
+\`security-architect\`, \`security-auditor\`, \`memory-specialist\`, \`performance-engineer\`
+
+### Swarm Coordination
+\`hierarchical-coordinator\`, \`mesh-coordinator\`, \`adaptive-coordinator\`
+
+### GitHub & Repository
+\`pr-manager\`, \`code-review-swarm\`, \`issue-tracker\`, \`release-manager\`
+
+### SPARC Methodology
+\`sparc-coord\`, \`sparc-coder\`, \`specification\`, \`pseudocode\`, \`architecture\``;
+}
+function hooksSystem() {
+    return `## Hooks System (27 Hooks + 12 Workers)
+
+### Essential Hooks
+
+| Hook | Description |
+|------|-------------|
+| \`pre-task\` / \`post-task\` | Task lifecycle with learning |
+| \`pre-edit\` / \`post-edit\` | File editing with neural training |
+| \`session-start\` / \`session-end\` | Session state persistence |
+| \`route\` | Route task to optimal agent |
+| \`intelligence\` | RuVector intelligence system |
+| \`worker\` | Background worker management |
+
+### 12 Background Workers
+
+| Worker | Priority | Description |
+|--------|----------|-------------|
+| \`optimize\` | high | Performance optimization |
+| \`audit\` | critical | Security analysis |
+| \`testgaps\` | normal | Test coverage analysis |
+| \`map\` | normal | Codebase mapping |
+| \`deepdive\` | normal | Deep code analysis |
+| \`document\` | normal | Auto-documentation |
+
+\`\`\`bash
+npx monomind@latest hooks pre-task --description "[task]"
+npx monomind@latest hooks post-task --task-id "[id]" --success true
+npx monomind@latest hooks worker dispatch --trigger audit
+\`\`\``;
+}
+function learningProtocol() {
+    return `## Auto-Learning Protocol
+
+### Before Starting Any Task
+\`\`\`bash
+npx monomind@latest memory search --query "[task keywords]" --namespace patterns
+npx monomind@latest hooks route --task "[task description]"
+\`\`\`
+
+### After Completing Any Task Successfully
+\`\`\`bash
+npx monomind@latest memory store --namespace patterns --key "[pattern-name]" --value "[what worked]"
+npx monomind@latest hooks post-task --task-id "[id]" --success true --store-results true
+\`\`\`
+
+- ALWAYS check memory before starting new features, debugging, or refactoring
+- ALWAYS store patterns in memory after solving bugs, completing features, or finding optimizations`;
+}
+function memoryCommands() {
+    return `## Memory Commands Reference
+
+\`\`\`bash
+# Store (REQUIRED: --key, --value; OPTIONAL: --namespace, --ttl, --tags)
+npx monomind@latest memory store --key "pattern-auth" --value "JWT with refresh" --namespace patterns
+
+# Search (REQUIRED: --query; OPTIONAL: --namespace, --limit, --threshold)
+npx monomind@latest memory search --query "authentication patterns"
+
+# List (OPTIONAL: --namespace, --limit)
+npx monomind@latest memory list --namespace patterns --limit 10
+
+# Retrieve (REQUIRED: --key; OPTIONAL: --namespace)
+npx monomind@latest memory retrieve --key "pattern-auth" --namespace patterns
+\`\`\``;
+}
+function securityRulesLight() {
+    return `## Security Rules
+
+- NEVER hardcode API keys, secrets, or credentials in source files
+- NEVER commit .env files or any file containing secrets
+- Always validate user input at system boundaries
+- Always sanitize file paths to prevent directory traversal
+- Run \`npx monomind@latest security scan\` after security-related changes`;
+}
+function buildAndTest() {
+    return `## Build & Test
+
+\`\`\`bash
+# Build
+npm run build
+
+# Test
+npm test
+
+# Lint
+npm run lint
+\`\`\`
+
+- ALWAYS run tests after making code changes
+- ALWAYS verify build succeeds before committing`;
+}
+function securitySection() {
+    return `## Security Protocol
+
+- NEVER hardcode API keys, secrets, or credentials in source files
+- NEVER commit .env files or any file containing secrets
+- Always validate all user input at system boundaries using Zod schemas
+- Always sanitize file paths to prevent directory traversal attacks
+- Always use parameterized queries — never concatenate SQL strings
+- Run security audit after any authentication or authorization changes
+
+### Security Scanning
+\`\`\`bash
+npx monomind@latest security scan --depth full
+npx monomind@latest security audit --report
+npx monomind@latest security cve --check
+\`\`\`
+
+### Security Agents
+- \`security-architect\` — threat modeling, architecture review
+- \`security-auditor\` — code audit, vulnerability detection
+- Use agent routing code 9 (hierarchical/specialized) for security tasks`;
+}
+function performanceSection() {
+    return `## Performance Optimization Protocol
+
+- Always run benchmarks before and after performance changes
+- Always profile before optimizing — never guess at bottlenecks
+- Prefer algorithmic improvements over micro-optimizations
+- Keep HNSW search within 150x-12,500x faster target
+- Keep memory reduction within 50-75% target with quantization
+
+### Performance Tooling
+\`\`\`bash
+npx monomind@latest performance benchmark --suite all
+npx monomind@latest performance profile --target "[component]"
+npx monomind@latest performance metrics --format table
+\`\`\`
+
+### Performance Agents
+- \`performance-engineer\` — profiling, benchmarking, optimization
+- \`perf-analyzer\` — bottleneck detection, analysis
+- Use agent routing code 7 (hierarchical/specialized) for performance tasks`;
+}
+function intelligenceSystem() {
+    return `## Intelligence System (RuVector)
+
+- **SONA**: Self-Optimizing Neural Architecture (<0.05ms adaptation)
+- **HNSW**: 150x-12,500x faster pattern search
+- **EWC++**: Elastic Weight Consolidation (prevents forgetting)
+- **Flash Attention**: 2.49x-7.47x speedup
+
+The 4-step intelligence pipeline:
+1. **RETRIEVE** - Fetch relevant patterns via HNSW
+2. **JUDGE** - Evaluate with verdicts (success/failure)
+3. **DISTILL** - Extract key learnings via LoRA
+4. **CONSOLIDATE** - Prevent catastrophic forgetting via EWC++`;
+}
+function envVars() {
+    return `## Environment Variables
+
+\`\`\`bash
+MONOMIND_CONFIG=./monomind.config.json
+MONOMIND_LOG_LEVEL=info
+ANTHROPIC_API_KEY=sk-ant-...
+MONOMIND_MEMORY_BACKEND=hybrid
+MONOMIND_MEMORY_PATH=./data/memory
+\`\`\``;
+}
+function graphifySection() {
+    return `## Knowledge Graph (Monograph)
+
+Built into monomind since v1.8.0 — no separate install needed. Pure TypeScript, no Python required.
+
+### MCP Tools (prefix: \`mcp__monomind__\`)
+
+| Tool | Description |
+|------|-------------|
+| \`monograph_build\` | Build or refresh knowledge graph from codebase |
+| \`monograph_report\` | Generate GRAPH_REPORT.md with community breakdown |
+| \`monograph_suggest\` | Get refactoring/architecture suggestions from graph |
+| \`monograph_health\` | Check graph quality score and experiment status |
+
+### How It Works
+
+1. **AST extraction** — parses TypeScript/JS/Python/Go/Rust into nodes + edges
+2. **Community detection** — Louvain algorithm finds logical clusters
+3. **Quality metric** — \`graphQuality = avgCohesion × ln(1 + avgDegree)\`
+4. **Experiment loop** — tracks BASELINE/KEEP/DISCARD in \`results.tsv\`
+5. **BFD chunking** — efficient Anthropic API calls via bin-packing
+
+> If monograph tools are not available, run \`npx monomind@latest init --force\` then restart Claude Code.`;
+}
+function setupAndBoundary() {
+    return `## Quick Setup
+
+\`\`\`bash
+# Add MCP server — includes monograph, swarm, memory, hooks, all 200+ tools
+claude mcp add monomind -- npx -y monomind@latest mcp start
+
+# Start background workers
+npx monomind@latest daemon start
+
+# Verify everything works
+npx monomind@latest doctor --fix
+\`\`\`
+
+> **Package name changed:** Use \`monomind@latest\` (not \`@monomind/cli@latest\` which is the old name and returns 404).
+
+## Claude Code vs CLI Tools
+
+- Claude Code's Task tool handles ALL execution: agents, file ops, code generation, git
+- CLI tools handle coordination via Bash: swarm init, memory, hooks, routing
+- NEVER use CLI tools as a substitute for Task tool agents
+
+## Support
+
+- Documentation: https://github.com/nokhodian/monomind
+- Issues: https://github.com/nokhodian/monomind/issues`;
+}
+// --- Template Composers ---
+/**
+ * Template section map — defines which sections are included per template.
+ */
+const TEMPLATE_SECTIONS = {
+    minimal: [
+        behavioralRules,
+        (_opts) => codingPrinciples(),
+        fileOrganization,
+        projectArchitecture,
+        (_opts) => buildAndTest(),
+        (_opts) => securityRulesLight(),
+        concurrencyRules,
+        (_opts) => antiDriftConfig(),
+        executionRules,
+        (_opts) => cliCommandsTable(),
+        (_opts) => graphifySection(),
+        (_opts) => setupAndBoundary(),
+    ],
+    standard: [
+        behavioralRules,
+        (_opts) => codingPrinciples(),
+        fileOrganization,
+        projectArchitecture,
+        (_opts) => buildAndTest(),
+        (_opts) => securityRulesLight(),
+        concurrencyRules,
+        (_opts) => swarmOrchestration(),
+        (_opts) => antiDriftConfig(),
+        executionRules,
+        (_opts) => cliCommandsTable(),
+        (_opts) => agentTypes(),
+        (_opts) => memoryCommands(),
+        (_opts) => graphifySection(),
+        (_opts) => setupAndBoundary(),
+    ],
+    full: [
+        behavioralRules,
+        (_opts) => codingPrinciples(),
+        fileOrganization,
+        projectArchitecture,
+        (_opts) => buildAndTest(),
+        (_opts) => securityRulesLight(),
+        concurrencyRules,
+        (_opts) => swarmOrchestration(),
+        (_opts) => antiDriftConfig(),
+        (_opts) => autoStartProtocol(),
+        executionRules,
+        (_opts) => cliCommandsTable(),
+        (_opts) => agentTypes(),
+        (_opts) => hooksSystem(),
+        (_opts) => learningProtocol(),
+        (_opts) => memoryCommands(),
+        (_opts) => graphifySection(),
+        (_opts) => intelligenceSystem(),
+        (_opts) => envVars(),
+        (_opts) => setupAndBoundary(),
+    ],
+    security: [
+        behavioralRules,
+        (_opts) => codingPrinciples(),
+        fileOrganization,
+        projectArchitecture,
+        (_opts) => buildAndTest(),
+        concurrencyRules,
+        (_opts) => swarmOrchestration(),
+        (_opts) => antiDriftConfig(),
+        executionRules,
+        (_opts) => securitySection(),
+        (_opts) => cliCommandsTable(),
+        (_opts) => agentTypes(),
+        (_opts) => memoryCommands(),
+        (_opts) => graphifySection(),
+        (_opts) => setupAndBoundary(),
+    ],
+    performance: [
+        behavioralRules,
+        (_opts) => codingPrinciples(),
+        fileOrganization,
+        projectArchitecture,
+        (_opts) => buildAndTest(),
+        (_opts) => securityRulesLight(),
+        concurrencyRules,
+        (_opts) => swarmOrchestration(),
+        (_opts) => antiDriftConfig(),
+        executionRules,
+        (_opts) => performanceSection(),
+        (_opts) => cliCommandsTable(),
+        (_opts) => agentTypes(),
+        (_opts) => memoryCommands(),
+        (_opts) => graphifySection(),
+        (_opts) => intelligenceSystem(),
+        (_opts) => setupAndBoundary(),
+    ],
+    solo: [
+        behavioralRules,
+        (_opts) => codingPrinciples(),
+        fileOrganization,
+        projectArchitecture,
+        (_opts) => buildAndTest(),
+        (_opts) => securityRulesLight(),
+        concurrencyRules,
+        executionRules,
+        (_opts) => cliCommandsTable(),
+        (_opts) => memoryCommands(),
+        (_opts) => setupAndBoundary(),
+    ],
+};
+// --- Public API ---
+/**
+ * Generate CLAUDE.md content based on init options and template.
+ * Template is determined by: options.runtime.claudeMdTemplate > explicit param > 'standard'
+ */
+export function generateClaudeMd(options, template) {
+    const tmpl = template ?? options.runtime.claudeMdTemplate ?? 'standard';
+    const sections = TEMPLATE_SECTIONS[tmpl] ?? TEMPLATE_SECTIONS.standard;
+    const header = `# Claude Code Configuration - Monomind\n`;
+    const body = sections.map(fn => fn(options)).join('\n\n');
+    return `${header}\n${body}\n`;
+}
+/**
+ * Generate minimal CLAUDE.md content (backward-compatible alias).
+ */
+export function generateMinimalClaudeMd(options) {
+    return generateClaudeMd(options, 'minimal');
+}
+/** Available template names for CLI wizard */
+export const CLAUDE_MD_TEMPLATES = [
+    { name: 'minimal', description: 'Quick start — behavioral rules, anti-drift config, CLI reference (~120 lines)' },
+    { name: 'standard', description: 'Recommended — swarm orchestration, agents, memory commands (~250 lines)' },
+    { name: 'full', description: 'Everything — hooks, learning protocol, intelligence system (~400 lines)' },
+    { name: 'security', description: 'Security-focused — adds security scanning, audit protocols, CVE checks' },
+    { name: 'performance', description: 'Performance-focused — adds benchmarking, profiling, optimization protocols' },
+    { name: 'solo', description: 'Solo developer — no swarm, simple agent usage, memory commands (~150 lines)' },
+];
+export default generateClaudeMd;
+//# sourceMappingURL=claudemd-generator.js.map

package/packages/@monomind/cli/dist/src/init/executor.d.ts

@@ -0,0 +1,38 @@
+/**
+ * Init Executor
+ * Main execution logic for V1 initialization
+ */
+import type { InitOptions, InitResult } from './types.js';
+export declare function executeInit(options: InitOptions): Promise<InitResult>;
+/**
+ * Upgrade result interface
+ */
+export interface UpgradeResult {
+    success: boolean;
+    updated: string[];
+    created: string[];
+    preserved: string[];
+    errors: string[];
+    /** Added by --add-missing flag */
+    addedSkills?: string[];
+    addedAgents?: string[];
+    addedCommands?: string[];
+    /** Added by --settings flag */
+    settingsUpdated?: string[];
+}
+/**
+ * Execute upgrade - updates helpers and creates missing metrics without losing data
+ * This is safe for existing users who want the latest statusline fixes
+ * @param targetDir - Target directory
+ * @param upgradeSettings - If true, merge new settings into existing settings.json
+ */
+export declare function executeUpgrade(targetDir: string, upgradeSettings?: boolean): Promise<UpgradeResult>;
+/**
+ * Execute upgrade with --add-missing flag
+ * Adds any new skills, agents, and commands that don't exist yet
+ * @param targetDir - Target directory
+ * @param upgradeSettings - If true, merge new settings into existing settings.json
+ */
+export declare function executeUpgradeWithMissing(targetDir: string, upgradeSettings?: boolean): Promise<UpgradeResult>;
+export default executeInit;
+//# sourceMappingURL=executor.d.ts.map