molstar 3.37.1 → 3.38.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (149) hide show
  1. package/build/viewer/index.html +3 -0
  2. package/build/viewer/molstar.js +1 -1
  3. package/lib/apps/viewer/app.d.ts +20 -0
  4. package/lib/apps/viewer/app.js +13 -11
  5. package/lib/apps/viewer/index.html +3 -0
  6. package/lib/commonjs/apps/viewer/app.d.ts +20 -0
  7. package/lib/commonjs/apps/viewer/app.js +14 -12
  8. package/lib/commonjs/extensions/geo-export/mesh-exporter.js +4 -4
  9. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
  10. package/lib/commonjs/mol-canvas3d/passes/postprocessing.d.ts +0 -1
  11. package/lib/commonjs/mol-canvas3d/passes/postprocessing.js +23 -16
  12. package/lib/commonjs/mol-geo/geometry/geometry.d.ts +1 -1
  13. package/lib/commonjs/mol-geo/geometry/geometry.js +2 -2
  14. package/lib/commonjs/mol-geo/geometry/spheres/spheres-builder.d.ts +1 -1
  15. package/lib/commonjs/mol-geo/geometry/spheres/spheres-builder.js +4 -27
  16. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +3 -5
  17. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +25 -21
  18. package/lib/commonjs/mol-gl/renderable/schema.d.ts +1 -0
  19. package/lib/commonjs/mol-gl/renderable/schema.js +1 -0
  20. package/lib/commonjs/mol-gl/renderable/spheres.d.ts +20 -19
  21. package/lib/commonjs/mol-gl/renderable/spheres.js +1 -1
  22. package/lib/commonjs/mol-gl/renderer.js +1 -0
  23. package/lib/commonjs/mol-gl/shader/chunks/apply-fog.glsl.d.ts +1 -1
  24. package/lib/commonjs/mol-gl/shader/chunks/apply-fog.glsl.js +1 -1
  25. package/lib/commonjs/mol-gl/shader/chunks/common-clip.glsl.d.ts +1 -1
  26. package/lib/commonjs/mol-gl/shader/chunks/common-clip.glsl.js +1 -1
  27. package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
  28. package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -1
  29. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  30. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  31. package/lib/commonjs/mol-gl/shader/spheres.frag.d.ts +2 -2
  32. package/lib/commonjs/mol-gl/shader/spheres.frag.js +2 -2
  33. package/lib/commonjs/mol-gl/shader/spheres.vert.d.ts +1 -1
  34. package/lib/commonjs/mol-gl/shader/spheres.vert.js +1 -1
  35. package/lib/commonjs/mol-math/linear-algebra/3d/euler.d.ts +36 -0
  36. package/lib/commonjs/mol-math/linear-algebra/3d/euler.js +165 -0
  37. package/lib/commonjs/mol-math/linear-algebra/3d/mat4.d.ts +4 -0
  38. package/lib/commonjs/mol-math/linear-algebra/3d/mat4.js +150 -0
  39. package/lib/commonjs/mol-math/linear-algebra/3d/quat.d.ts +4 -1
  40. package/lib/commonjs/mol-math/linear-algebra/3d/quat.js +58 -1
  41. package/lib/commonjs/mol-model/structure/model/types.js +6 -1
  42. package/lib/commonjs/mol-model-formats/structure/property/assembly.d.ts +10 -1
  43. package/lib/commonjs/mol-model-formats/structure/property/assembly.js +3 -1
  44. package/lib/commonjs/mol-model-props/sequence/sifts-mapping.d.ts +1 -1
  45. package/lib/commonjs/mol-model-props/sequence/sifts-mapping.js +3 -5
  46. package/lib/commonjs/mol-plugin/behavior/dynamic/camera.js +3 -3
  47. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +21 -6
  48. package/lib/commonjs/mol-plugin-state/manager/snapshots.d.ts +3 -1
  49. package/lib/commonjs/mol-plugin-state/manager/snapshots.js +60 -45
  50. package/lib/commonjs/mol-plugin-ui/controls/icons.d.ts +1 -0
  51. package/lib/commonjs/mol-plugin-ui/controls/icons.js +4 -1
  52. package/lib/commonjs/mol-repr/structure/params.d.ts +1 -0
  53. package/lib/commonjs/mol-repr/structure/registry.d.ts +7 -0
  54. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -0
  55. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +6 -0
  56. package/lib/commonjs/mol-repr/structure/representation/line.d.ts +3 -0
  57. package/lib/commonjs/mol-repr/structure/representation/point.d.ts +3 -0
  58. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +6 -0
  59. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +1 -0
  60. package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +2 -1
  61. package/lib/commonjs/mol-repr/structure/visual/element-point.js +4 -3
  62. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +5 -1
  63. package/lib/commonjs/mol-repr/structure/visual/element-sphere.js +7 -5
  64. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +3 -1
  65. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.js +2 -2
  66. package/lib/commonjs/mol-repr/structure/visual/util/element.d.ts +1 -0
  67. package/lib/commonjs/mol-repr/structure/visual/util/element.js +8 -3
  68. package/lib/commonjs/mol-theme/color/cartoon.d.ts +24 -12
  69. package/lib/commonjs/mol-theme/color/element-symbol.d.ts +35 -4
  70. package/lib/commonjs/mol-theme/color/element-symbol.js +9 -2
  71. package/lib/commonjs/mol-theme/color/illustrative.d.ts +8 -8
  72. package/lib/commonjs/mol-theme/color.d.ts +33 -12
  73. package/lib/commonjs/mol-util/binding.js +4 -1
  74. package/lib/commonjs/mol-util/color/distinct.d.ts +2 -1
  75. package/lib/commonjs/mol-util/color/distinct.js +5 -4
  76. package/lib/commonjs/mol-util/lru-cache.d.ts +2 -1
  77. package/lib/commonjs/mol-util/lru-cache.js +10 -1
  78. package/lib/extensions/geo-export/mesh-exporter.js +4 -4
  79. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
  80. package/lib/mol-canvas3d/passes/postprocessing.d.ts +0 -1
  81. package/lib/mol-canvas3d/passes/postprocessing.js +23 -16
  82. package/lib/mol-geo/geometry/geometry.d.ts +1 -1
  83. package/lib/mol-geo/geometry/geometry.js +2 -2
  84. package/lib/mol-geo/geometry/spheres/spheres-builder.d.ts +1 -1
  85. package/lib/mol-geo/geometry/spheres/spheres-builder.js +4 -27
  86. package/lib/mol-geo/geometry/spheres/spheres.d.ts +3 -5
  87. package/lib/mol-geo/geometry/spheres/spheres.js +27 -23
  88. package/lib/mol-gl/renderable/schema.d.ts +1 -0
  89. package/lib/mol-gl/renderable/schema.js +1 -0
  90. package/lib/mol-gl/renderable/spheres.d.ts +20 -19
  91. package/lib/mol-gl/renderable/spheres.js +2 -2
  92. package/lib/mol-gl/renderer.js +1 -0
  93. package/lib/mol-gl/shader/chunks/apply-fog.glsl.d.ts +1 -1
  94. package/lib/mol-gl/shader/chunks/apply-fog.glsl.js +1 -1
  95. package/lib/mol-gl/shader/chunks/common-clip.glsl.d.ts +1 -1
  96. package/lib/mol-gl/shader/chunks/common-clip.glsl.js +1 -1
  97. package/lib/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
  98. package/lib/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -1
  99. package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  100. package/lib/mol-gl/shader/direct-volume.frag.js +1 -1
  101. package/lib/mol-gl/shader/spheres.frag.d.ts +2 -2
  102. package/lib/mol-gl/shader/spheres.frag.js +2 -2
  103. package/lib/mol-gl/shader/spheres.vert.d.ts +1 -1
  104. package/lib/mol-gl/shader/spheres.vert.js +1 -1
  105. package/lib/mol-math/linear-algebra/3d/euler.d.ts +36 -0
  106. package/lib/mol-math/linear-algebra/3d/euler.js +162 -0
  107. package/lib/mol-math/linear-algebra/3d/mat4.d.ts +4 -0
  108. package/lib/mol-math/linear-algebra/3d/mat4.js +150 -0
  109. package/lib/mol-math/linear-algebra/3d/quat.d.ts +4 -1
  110. package/lib/mol-math/linear-algebra/3d/quat.js +58 -1
  111. package/lib/mol-model/structure/model/types.js +6 -1
  112. package/lib/mol-model-formats/structure/property/assembly.d.ts +10 -1
  113. package/lib/mol-model-formats/structure/property/assembly.js +2 -2
  114. package/lib/mol-model-props/sequence/sifts-mapping.d.ts +1 -1
  115. package/lib/mol-model-props/sequence/sifts-mapping.js +3 -5
  116. package/lib/mol-plugin/behavior/dynamic/camera.js +3 -3
  117. package/lib/mol-plugin/version.js +2 -2
  118. package/lib/mol-plugin-state/builder/structure/representation-preset.d.ts +21 -6
  119. package/lib/mol-plugin-state/manager/snapshots.d.ts +3 -1
  120. package/lib/mol-plugin-state/manager/snapshots.js +60 -45
  121. package/lib/mol-plugin-ui/controls/icons.d.ts +1 -0
  122. package/lib/mol-plugin-ui/controls/icons.js +2 -0
  123. package/lib/mol-repr/structure/params.d.ts +1 -0
  124. package/lib/mol-repr/structure/registry.d.ts +7 -0
  125. package/lib/mol-repr/structure/representation/backbone.d.ts +3 -0
  126. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +6 -0
  127. package/lib/mol-repr/structure/representation/line.d.ts +3 -0
  128. package/lib/mol-repr/structure/representation/point.d.ts +3 -0
  129. package/lib/mol-repr/structure/representation/spacefill.d.ts +6 -0
  130. package/lib/mol-repr/structure/units-visual.d.ts +1 -0
  131. package/lib/mol-repr/structure/visual/element-point.d.ts +2 -1
  132. package/lib/mol-repr/structure/visual/element-point.js +4 -3
  133. package/lib/mol-repr/structure/visual/element-sphere.d.ts +5 -1
  134. package/lib/mol-repr/structure/visual/element-sphere.js +7 -5
  135. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +3 -1
  136. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.js +2 -2
  137. package/lib/mol-repr/structure/visual/util/element.d.ts +1 -0
  138. package/lib/mol-repr/structure/visual/util/element.js +8 -3
  139. package/lib/mol-theme/color/cartoon.d.ts +24 -12
  140. package/lib/mol-theme/color/element-symbol.d.ts +35 -4
  141. package/lib/mol-theme/color/element-symbol.js +9 -2
  142. package/lib/mol-theme/color/illustrative.d.ts +8 -8
  143. package/lib/mol-theme/color.d.ts +33 -12
  144. package/lib/mol-util/binding.js +4 -1
  145. package/lib/mol-util/color/distinct.d.ts +2 -1
  146. package/lib/mol-util/color/distinct.js +5 -4
  147. package/lib/mol-util/lru-cache.d.ts +2 -1
  148. package/lib/mol-util/lru-cache.js +10 -1
  149. package/package.json +20 -20
package/build/viewer/index.html CHANGED
@@ -65,7 +65,10 @@
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  var allowMajorPerformanceCaveat = getParam('allow-major-performance-caveat', '[^&]+').trim() === '1';
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  var powerPreference = getParam('power-preference', '[^&]+').trim().toLowerCase();
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+ // console.log('Available extensions: ', Object.keys(molstar.ExtensionMap));
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+
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  molstar.Viewer.create('app', {
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+ disabledExtensions: [], // anything from Object.keys(molstar.ExtensionMap)
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  layoutShowControls: !hideControls,
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  viewportShowExpand: false,
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  collapseLeftPanel: collapseLeftPanel,