molstar 3.31.2 → 3.31.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (80) hide show
  1. package/LICENSE +20 -20
  2. package/README.md +202 -202
  3. package/build/viewer/embedded.html +52 -52
  4. package/build/viewer/index.html +115 -115
  5. package/build/viewer/molstar.js +1 -1
  6. package/lib/apps/docking-viewer/index.html +36 -36
  7. package/lib/apps/viewer/embedded.html +52 -52
  8. package/lib/apps/viewer/index.html +115 -115
  9. package/lib/commonjs/extensions/meshes/mesh-extension.d.ts +4 -2
  10. package/lib/commonjs/extensions/meshes/mesh-streaming/behavior.d.ts +2 -0
  11. package/lib/commonjs/mol-canvas3d/canvas3d.js +2 -1
  12. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
  13. package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +0 -1
  14. package/lib/commonjs/mol-geo/geometry/points/points.d.ts +1 -1
  15. package/lib/commonjs/mol-gl/shader/cylinders.vert.d.ts +2 -2
  16. package/lib/commonjs/mol-gl/shader/cylinders.vert.js +2 -2
  17. package/lib/commonjs/mol-gl/shader/spheres.vert.d.ts +2 -2
  18. package/lib/commonjs/mol-gl/shader/spheres.vert.js +2 -2
  19. package/lib/commonjs/mol-math/linear-algebra/matrix/principal-axes.js +1 -1
  20. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -3
  21. package/lib/commonjs/mol-plugin/context.js +1 -0
  22. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.js +2 -1
  23. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.js +2 -1
  24. package/lib/commonjs/mol-repr/structure/visual/util/link.d.ts +1 -0
  25. package/lib/commonjs/mol-repr/structure/visual/util/link.js +27 -9
  26. package/lib/commonjs/mol-script/language/builder.d.ts +1 -0
  27. package/lib/commonjs/mol-util/data-source.js +2 -1
  28. package/lib/examples/alpha-orbitals/index.html +72 -72
  29. package/lib/examples/basic-wrapper/index.html +137 -137
  30. package/lib/examples/lighting/index.html +88 -88
  31. package/lib/examples/proteopedia-wrapper/index.html +236 -236
  32. package/lib/extensions/meshes/mesh-extension.d.ts +4 -2
  33. package/lib/extensions/meshes/mesh-streaming/behavior.d.ts +2 -0
  34. package/lib/mol-canvas3d/canvas3d.js +2 -1
  35. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
  36. package/lib/mol-geo/geometry/lines/lines.d.ts +0 -1
  37. package/lib/mol-geo/geometry/points/points.d.ts +1 -1
  38. package/lib/mol-gl/shader/cylinders.vert.d.ts +2 -2
  39. package/lib/mol-gl/shader/cylinders.vert.js +2 -2
  40. package/lib/mol-gl/shader/spheres.vert.d.ts +2 -2
  41. package/lib/mol-gl/shader/spheres.vert.js +2 -2
  42. package/lib/mol-math/linear-algebra/matrix/principal-axes.js +1 -1
  43. package/lib/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -3
  44. package/lib/mol-plugin/context.js +1 -0
  45. package/lib/mol-plugin/version.js +2 -2
  46. package/lib/mol-plugin-ui/skin/base/base.scss +32 -32
  47. package/lib/mol-plugin-ui/skin/base/components/controls-base.scss +333 -333
  48. package/lib/mol-plugin-ui/skin/base/components/controls.scss +418 -418
  49. package/lib/mol-plugin-ui/skin/base/components/help.scss +27 -27
  50. package/lib/mol-plugin-ui/skin/base/components/line-graph.scss +67 -67
  51. package/lib/mol-plugin-ui/skin/base/components/log.scss +100 -100
  52. package/lib/mol-plugin-ui/skin/base/components/misc.scss +663 -663
  53. package/lib/mol-plugin-ui/skin/base/components/sequence.scss +125 -125
  54. package/lib/mol-plugin-ui/skin/base/components/slider.scss +165 -165
  55. package/lib/mol-plugin-ui/skin/base/components/tasks.scss +99 -99
  56. package/lib/mol-plugin-ui/skin/base/components/toast.scss +83 -83
  57. package/lib/mol-plugin-ui/skin/base/components/transformer.scss +163 -163
  58. package/lib/mol-plugin-ui/skin/base/components/viewport.scss +137 -137
  59. package/lib/mol-plugin-ui/skin/base/layout/common.scss +71 -71
  60. package/lib/mol-plugin-ui/skin/base/layout/controls-landscape.scss +89 -89
  61. package/lib/mol-plugin-ui/skin/base/layout/controls-outside.scss +98 -98
  62. package/lib/mol-plugin-ui/skin/base/layout/controls-portrait.scss +108 -108
  63. package/lib/mol-plugin-ui/skin/base/layout.scss +40 -40
  64. package/lib/mol-plugin-ui/skin/base/logo.scss +12 -12
  65. package/lib/mol-plugin-ui/skin/base/normalize.scss +209 -209
  66. package/lib/mol-plugin-ui/skin/base/ui.scss +40 -40
  67. package/lib/mol-plugin-ui/skin/base/variables.scss +88 -88
  68. package/lib/mol-plugin-ui/skin/blue.scss +1 -1
  69. package/lib/mol-plugin-ui/skin/colors/blue.scss +23 -23
  70. package/lib/mol-plugin-ui/skin/colors/dark.scss +23 -23
  71. package/lib/mol-plugin-ui/skin/colors/light.scss +29 -29
  72. package/lib/mol-plugin-ui/skin/dark.scss +1 -1
  73. package/lib/mol-plugin-ui/skin/light.scss +1 -1
  74. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.js +2 -1
  75. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.js +2 -1
  76. package/lib/mol-repr/structure/visual/util/link.d.ts +1 -0
  77. package/lib/mol-repr/structure/visual/util/link.js +27 -9
  78. package/lib/mol-script/language/builder.d.ts +1 -0
  79. package/lib/mol-util/data-source.js +2 -1
  80. package/package.json +178 -177
@@ -1,27 +1,27 @@
1
-
2
- .msp-help-row {
3
- position: relative;
4
- height: $row-height;
5
- background: $default-background;
6
- margin-top: 1px;
7
- display: table;
8
- width: 100%;
9
-
10
- > span {
11
- width: $control-label-width + $control-spacing;
12
- text-align: right;
13
- padding: $info-vertical-padding $control-spacing;
14
- color: color-lower-contrast($font-color, 15%);
15
- display: table-cell;
16
- font-weight: bold;
17
-
18
- @include non-selectable;
19
- }
20
-
21
- > div {
22
- background: $msp-form-control-background;
23
- position: relative;
24
- padding: $info-vertical-padding $control-spacing;
25
- display: table-cell;
26
- }
27
- }
1
+
2
+ .msp-help-row {
3
+ position: relative;
4
+ height: $row-height;
5
+ background: $default-background;
6
+ margin-top: 1px;
7
+ display: table;
8
+ width: 100%;
9
+
10
+ > span {
11
+ width: $control-label-width + $control-spacing;
12
+ text-align: right;
13
+ padding: $info-vertical-padding $control-spacing;
14
+ color: color-lower-contrast($font-color, 15%);
15
+ display: table-cell;
16
+ font-weight: bold;
17
+
18
+ @include non-selectable;
19
+ }
20
+
21
+ > div {
22
+ background: $msp-form-control-background;
23
+ position: relative;
24
+ padding: $info-vertical-padding $control-spacing;
25
+ display: table-cell;
26
+ }
27
+ }
@@ -1,68 +1,68 @@
1
- .msp-canvas {
2
- width: 100%;
3
- height: 100%;
4
- background-color: #f3f2ee;
5
-
6
- text {
7
- -webkit-touch-callout: none; /* iOS Safari */
8
- -webkit-user-select: none; /* Safari */
9
- -khtml-user-select: none; /* Konqueror HTML */
10
- -moz-user-select: none; /* Firefox */
11
- -ms-user-select: none; /* Internet Explorer/Edge */
12
- user-select: none; /* Non-prefixed version, currently
13
- supported by Chrome and Opera */
14
- }
15
-
16
- circle {
17
- stroke: black;
18
- stroke-width: 10;
19
- stroke-opacity: .3;
20
-
21
- &:hover {
22
- fill: #ae5d04;
23
- stroke: black;
24
- stroke-width: 10px;
25
- }
26
- }
27
-
28
- .info {
29
- fill: white;
30
- stroke: black;
31
- stroke-width: 3;
32
- }
33
-
34
- .show {
35
- visibility: visible;
36
- }
37
- .hide {
38
- visibility: hidden;
39
- }
40
-
41
- .delete-button {
42
- rect {
43
- fill: #ED4337;
44
- stroke: black;
45
- }
46
-
47
- text {
48
- stroke: white;
49
- fill: white;
50
- }
51
-
52
- &:hover {
53
- stroke: black;
54
- stroke-width: 3;
55
- fill: #ff6961;
56
- }
57
- }
58
-
59
- .infoCircle {
60
- &:hover {
61
- fill: #4c66b2;
62
- }
63
- }
64
- }
65
-
66
- .msp-canvas:focus {
67
- outline: none;
1
+ .msp-canvas {
2
+ width: 100%;
3
+ height: 100%;
4
+ background-color: #f3f2ee;
5
+
6
+ text {
7
+ -webkit-touch-callout: none; /* iOS Safari */
8
+ -webkit-user-select: none; /* Safari */
9
+ -khtml-user-select: none; /* Konqueror HTML */
10
+ -moz-user-select: none; /* Firefox */
11
+ -ms-user-select: none; /* Internet Explorer/Edge */
12
+ user-select: none; /* Non-prefixed version, currently
13
+ supported by Chrome and Opera */
14
+ }
15
+
16
+ circle {
17
+ stroke: black;
18
+ stroke-width: 10;
19
+ stroke-opacity: .3;
20
+
21
+ &:hover {
22
+ fill: #ae5d04;
23
+ stroke: black;
24
+ stroke-width: 10px;
25
+ }
26
+ }
27
+
28
+ .info {
29
+ fill: white;
30
+ stroke: black;
31
+ stroke-width: 3;
32
+ }
33
+
34
+ .show {
35
+ visibility: visible;
36
+ }
37
+ .hide {
38
+ visibility: hidden;
39
+ }
40
+
41
+ .delete-button {
42
+ rect {
43
+ fill: #ED4337;
44
+ stroke: black;
45
+ }
46
+
47
+ text {
48
+ stroke: white;
49
+ fill: white;
50
+ }
51
+
52
+ &:hover {
53
+ stroke: black;
54
+ stroke-width: 3;
55
+ fill: #ff6961;
56
+ }
57
+ }
58
+
59
+ .infoCircle {
60
+ &:hover {
61
+ fill: #4c66b2;
62
+ }
63
+ }
64
+ }
65
+
66
+ .msp-canvas:focus {
67
+ outline: none;
68
68
  }
@@ -1,100 +1,100 @@
1
-
2
- .msp-log-wrap {
3
- position: absolute;
4
- right: 0;
5
- top: 0;
6
- left: 0;
7
- bottom: 0;
8
- overflow: hidden;
9
- }
10
-
11
- .msp-log {
12
- position: absolute;
13
- right: -20px;
14
- top: 0;
15
- left: 0;
16
- bottom: 0;
17
- overflow-y: scroll;
18
- overflow-x: hidden;
19
- font-size: 90%;
20
- background: $control-background;
21
- }
22
-
23
- .msp-log {
24
- font-size: 90%;
25
-
26
- ul {
27
- padding: 0;
28
- margin: 0;
29
- }
30
-
31
- color: $log-font-color;
32
-
33
- li {
34
- clear: both;
35
- margin: 0;
36
- background: $default-background;
37
- position: relative;
38
-
39
- &:not(:last-child) {
40
- border-bottom: 1px solid $border-color;
41
- }
42
- }
43
-
44
-
45
- .msp-log-entry {
46
- margin-left: $control-label-width;
47
- background: color-lower-contrast($control-background, 5%);
48
- padding: $info-vertical-padding ($control-spacing + 15px) $info-vertical-padding $control-spacing ;
49
- }
50
-
51
- .msp-log-timestamp {
52
- padding: $info-vertical-padding $control-spacing $info-vertical-padding $control-spacing;
53
- float: left;
54
- text-align: right;
55
- width: $control-label-width;
56
- color: $log-timestamp-font-color;
57
- //vertical-align: baseline;
58
- //line-height: $row-height;
59
- font-size: 100%;
60
- }
61
-
62
- .msp-log-timestamp small {
63
- font-size: 100%;
64
- }
65
- }
66
-
67
- // .msp-log hr {
68
- // border-color: $separator-color;
69
- // margin: 3px 3px 0 5px;
70
- // }
71
-
72
- .msp-log .label {
73
- margin-top: -3px;
74
- font-size: 7pt;
75
- }
76
-
77
- .msp-log-entry-badge {
78
- position: absolute;
79
- left: 0;
80
- top: 0;
81
- bottom: 0;
82
- width: 6px;
83
- }
84
-
85
- .msp-log-entry-message {
86
- background: $log-message;
87
- }
88
-
89
- .msp-log-entry-info {
90
- background: $log-info;
91
- }
92
-
93
- .msp-log-entry-error {
94
- background: $log-error;
95
- }
96
-
97
- .msp-log-entry-warning {
98
- background: $log-warning;
99
- }
100
-
1
+
2
+ .msp-log-wrap {
3
+ position: absolute;
4
+ right: 0;
5
+ top: 0;
6
+ left: 0;
7
+ bottom: 0;
8
+ overflow: hidden;
9
+ }
10
+
11
+ .msp-log {
12
+ position: absolute;
13
+ right: -20px;
14
+ top: 0;
15
+ left: 0;
16
+ bottom: 0;
17
+ overflow-y: scroll;
18
+ overflow-x: hidden;
19
+ font-size: 90%;
20
+ background: $control-background;
21
+ }
22
+
23
+ .msp-log {
24
+ font-size: 90%;
25
+
26
+ ul {
27
+ padding: 0;
28
+ margin: 0;
29
+ }
30
+
31
+ color: $log-font-color;
32
+
33
+ li {
34
+ clear: both;
35
+ margin: 0;
36
+ background: $default-background;
37
+ position: relative;
38
+
39
+ &:not(:last-child) {
40
+ border-bottom: 1px solid $border-color;
41
+ }
42
+ }
43
+
44
+
45
+ .msp-log-entry {
46
+ margin-left: $control-label-width;
47
+ background: color-lower-contrast($control-background, 5%);
48
+ padding: $info-vertical-padding ($control-spacing + 15px) $info-vertical-padding $control-spacing ;
49
+ }
50
+
51
+ .msp-log-timestamp {
52
+ padding: $info-vertical-padding $control-spacing $info-vertical-padding $control-spacing;
53
+ float: left;
54
+ text-align: right;
55
+ width: $control-label-width;
56
+ color: $log-timestamp-font-color;
57
+ //vertical-align: baseline;
58
+ //line-height: $row-height;
59
+ font-size: 100%;
60
+ }
61
+
62
+ .msp-log-timestamp small {
63
+ font-size: 100%;
64
+ }
65
+ }
66
+
67
+ // .msp-log hr {
68
+ // border-color: $separator-color;
69
+ // margin: 3px 3px 0 5px;
70
+ // }
71
+
72
+ .msp-log .label {
73
+ margin-top: -3px;
74
+ font-size: 7pt;
75
+ }
76
+
77
+ .msp-log-entry-badge {
78
+ position: absolute;
79
+ left: 0;
80
+ top: 0;
81
+ bottom: 0;
82
+ width: 6px;
83
+ }
84
+
85
+ .msp-log-entry-message {
86
+ background: $log-message;
87
+ }
88
+
89
+ .msp-log-entry-info {
90
+ background: $log-info;
91
+ }
92
+
93
+ .msp-log-entry-error {
94
+ background: $log-error;
95
+ }
96
+
97
+ .msp-log-entry-warning {
98
+ background: $log-warning;
99
+ }
100
+