molstar 3.18.0 → 3.20.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (151) hide show
  1. package/build/viewer/molstar.js +1 -1
  2. package/lib/cli/chem-comp-dict/util.d.ts +2 -2
  3. package/lib/commonjs/cli/chem-comp-dict/util.d.ts +2 -2
  4. package/lib/commonjs/extensions/backgrounds/index.js +1 -0
  5. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
  6. package/lib/commonjs/mol-canvas3d/camera.d.ts +2 -1
  7. package/lib/commonjs/mol-canvas3d/camera.js +11 -7
  8. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +2 -0
  9. package/lib/commonjs/mol-canvas3d/canvas3d.js +6 -1
  10. package/lib/commonjs/mol-canvas3d/passes/background.d.ts +1 -0
  11. package/lib/commonjs/mol-canvas3d/passes/background.js +8 -3
  12. package/lib/commonjs/mol-canvas3d/passes/draw.js +1 -0
  13. package/lib/commonjs/mol-canvas3d/passes/passes.js +4 -1
  14. package/lib/commonjs/mol-canvas3d/passes/postprocessing.d.ts +1 -0
  15. package/lib/commonjs/mol-canvas3d/passes/smaa.d.ts +1 -1
  16. package/lib/commonjs/mol-canvas3d/passes/smaa.js +4 -3
  17. package/lib/commonjs/mol-geo/geometry/text/font-atlas.d.ts +1 -1
  18. package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +2 -2
  19. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +1 -0
  20. package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +1 -1
  21. package/lib/commonjs/mol-gl/compute/marching-cubes/active-voxels.js +1 -0
  22. package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +3 -0
  23. package/lib/commonjs/mol-gl/compute/util.d.ts +2 -2
  24. package/lib/commonjs/mol-gl/compute/util.js +4 -3
  25. package/lib/commonjs/mol-gl/renderable/util.d.ts +2 -1
  26. package/lib/commonjs/mol-gl/renderable/util.js +16 -3
  27. package/lib/commonjs/mol-gl/shader/background.frag.d.ts +1 -1
  28. package/lib/commonjs/mol-gl/shader/background.frag.js +1 -1
  29. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +1 -1
  30. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.js +1 -1
  31. package/lib/commonjs/mol-gl/shader/chunks/dpoit-write.glsl.d.ts +1 -1
  32. package/lib/commonjs/mol-gl/shader/chunks/dpoit-write.glsl.js +1 -1
  33. package/lib/commonjs/mol-io/common/binary-cif/array-encoder.js +15 -13
  34. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  35. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +1 -1
  36. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +3 -3
  37. package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.js +1 -1
  38. package/lib/commonjs/mol-math/geometry/lookup3d/common.d.ts +1 -0
  39. package/lib/commonjs/mol-math/geometry/lookup3d/grid.d.ts +1 -0
  40. package/lib/commonjs/mol-math/geometry/lookup3d/grid.js +172 -1
  41. package/lib/commonjs/mol-math/geometry/primitives/box3d.d.ts +1 -0
  42. package/lib/commonjs/mol-math/geometry/primitives/box3d.js +45 -0
  43. package/lib/commonjs/mol-math/geometry/primitives/sphere3d.d.ts +2 -0
  44. package/lib/commonjs/mol-math/geometry/primitives/sphere3d.js +6 -0
  45. package/lib/commonjs/mol-model/structure/model/model.d.ts +4 -0
  46. package/lib/commonjs/mol-model/structure/model/model.js +1 -0
  47. package/lib/commonjs/mol-model/structure/structure/structure.d.ts +4 -0
  48. package/lib/commonjs/mol-model/structure/structure/structure.js +1 -0
  49. package/lib/commonjs/mol-model/structure/structure/util/lookup3d.d.ts +4 -0
  50. package/lib/commonjs/mol-model/structure/structure/util/lookup3d.js +54 -0
  51. package/lib/commonjs/mol-model-props/common/custom-model-property.d.ts +1 -1
  52. package/lib/commonjs/mol-model-props/common/custom-model-property.js +5 -6
  53. package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/structure-info.d.ts +1 -1
  54. package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/structure-info.js +38 -4
  55. package/lib/commonjs/mol-plugin/commands.d.ts +1 -0
  56. package/lib/commonjs/mol-plugin/config.d.ts +1 -0
  57. package/lib/commonjs/mol-plugin-state/animation/built-in/model-index.d.ts +2 -2
  58. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.js +2 -2
  59. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +27 -5
  60. package/lib/commonjs/mol-plugin-ui/viewport/simple-settings.js +1 -0
  61. package/lib/commonjs/mol-theme/color/element-symbol.d.ts +46 -2
  62. package/lib/commonjs/mol-theme/color/element-symbol.js +9 -3
  63. package/lib/commonjs/mol-theme/color/illustrative.d.ts +44 -0
  64. package/lib/commonjs/mol-theme/color/illustrative.js +8 -2
  65. package/lib/commonjs/mol-theme/color/model-index.d.ts +2 -1
  66. package/lib/commonjs/mol-theme/color/model-index.js +13 -21
  67. package/lib/commonjs/mol-theme/color/structure-index.d.ts +41 -0
  68. package/lib/commonjs/mol-theme/color/structure-index.js +60 -0
  69. package/lib/commonjs/mol-theme/color/trajectory-index.d.ts +41 -0
  70. package/lib/commonjs/mol-theme/color/trajectory-index.js +70 -0
  71. package/lib/commonjs/mol-theme/color.d.ts +75 -1
  72. package/lib/commonjs/mol-theme/color.js +5 -1
  73. package/lib/commonjs/mol-util/color/distinct.d.ts +1 -1
  74. package/lib/commonjs/mol-util/color/distinct.js +3 -1
  75. package/lib/commonjs/mol-util/fibonacci-heap.d.ts +136 -0
  76. package/lib/commonjs/mol-util/fibonacci-heap.js +361 -0
  77. package/lib/extensions/backgrounds/index.js +1 -0
  78. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
  79. package/lib/mol-canvas3d/camera.d.ts +2 -1
  80. package/lib/mol-canvas3d/camera.js +11 -7
  81. package/lib/mol-canvas3d/canvas3d.d.ts +2 -0
  82. package/lib/mol-canvas3d/canvas3d.js +6 -1
  83. package/lib/mol-canvas3d/passes/background.d.ts +1 -0
  84. package/lib/mol-canvas3d/passes/background.js +8 -3
  85. package/lib/mol-canvas3d/passes/draw.js +1 -0
  86. package/lib/mol-canvas3d/passes/passes.js +4 -1
  87. package/lib/mol-canvas3d/passes/postprocessing.d.ts +1 -0
  88. package/lib/mol-canvas3d/passes/smaa.d.ts +1 -1
  89. package/lib/mol-canvas3d/passes/smaa.js +5 -4
  90. package/lib/mol-geo/geometry/text/font-atlas.d.ts +1 -1
  91. package/lib/mol-geo/geometry/text/font-atlas.js +2 -2
  92. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js +1 -0
  93. package/lib/mol-gl/compute/histogram-pyramid/reduction.js +1 -1
  94. package/lib/mol-gl/compute/marching-cubes/active-voxels.js +1 -0
  95. package/lib/mol-gl/compute/marching-cubes/isosurface.js +3 -0
  96. package/lib/mol-gl/compute/util.d.ts +2 -2
  97. package/lib/mol-gl/compute/util.js +4 -3
  98. package/lib/mol-gl/renderable/util.d.ts +2 -1
  99. package/lib/mol-gl/renderable/util.js +16 -3
  100. package/lib/mol-gl/shader/background.frag.d.ts +1 -1
  101. package/lib/mol-gl/shader/background.frag.js +1 -1
  102. package/lib/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +1 -1
  103. package/lib/mol-gl/shader/chunks/apply-light-color.glsl.js +1 -1
  104. package/lib/mol-gl/shader/chunks/dpoit-write.glsl.d.ts +1 -1
  105. package/lib/mol-gl/shader/chunks/dpoit-write.glsl.js +1 -1
  106. package/lib/mol-io/common/binary-cif/array-encoder.js +15 -13
  107. package/lib/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  108. package/lib/mol-io/reader/cif/schema/mmcif-extras.d.ts +1 -1
  109. package/lib/mol-io/reader/cif/schema/mmcif.d.ts +3 -3
  110. package/lib/mol-math/geometry/gaussian-density/gpu.js +1 -1
  111. package/lib/mol-math/geometry/lookup3d/common.d.ts +1 -0
  112. package/lib/mol-math/geometry/lookup3d/grid.d.ts +1 -0
  113. package/lib/mol-math/geometry/lookup3d/grid.js +172 -1
  114. package/lib/mol-math/geometry/primitives/box3d.d.ts +1 -0
  115. package/lib/mol-math/geometry/primitives/box3d.js +45 -0
  116. package/lib/mol-math/geometry/primitives/sphere3d.d.ts +2 -0
  117. package/lib/mol-math/geometry/primitives/sphere3d.js +6 -0
  118. package/lib/mol-model/structure/model/model.d.ts +4 -0
  119. package/lib/mol-model/structure/model/model.js +1 -0
  120. package/lib/mol-model/structure/structure/structure.d.ts +4 -0
  121. package/lib/mol-model/structure/structure/structure.js +1 -0
  122. package/lib/mol-model/structure/structure/util/lookup3d.d.ts +4 -0
  123. package/lib/mol-model/structure/structure/util/lookup3d.js +54 -0
  124. package/lib/mol-model-props/common/custom-model-property.d.ts +1 -1
  125. package/lib/mol-model-props/common/custom-model-property.js +5 -6
  126. package/lib/mol-plugin/behavior/dynamic/custom-props/structure-info.d.ts +1 -1
  127. package/lib/mol-plugin/behavior/dynamic/custom-props/structure-info.js +38 -4
  128. package/lib/mol-plugin/commands.d.ts +1 -0
  129. package/lib/mol-plugin/config.d.ts +1 -0
  130. package/lib/mol-plugin/version.js +2 -2
  131. package/lib/mol-plugin-state/animation/built-in/model-index.d.ts +2 -2
  132. package/lib/mol-plugin-state/builder/structure/hierarchy-preset.js +2 -2
  133. package/lib/mol-plugin-state/builder/structure/representation-preset.d.ts +27 -5
  134. package/lib/mol-plugin-ui/viewport/simple-settings.js +1 -0
  135. package/lib/mol-theme/color/element-symbol.d.ts +46 -2
  136. package/lib/mol-theme/color/element-symbol.js +9 -3
  137. package/lib/mol-theme/color/illustrative.d.ts +44 -0
  138. package/lib/mol-theme/color/illustrative.js +8 -2
  139. package/lib/mol-theme/color/model-index.d.ts +2 -1
  140. package/lib/mol-theme/color/model-index.js +13 -21
  141. package/lib/mol-theme/color/structure-index.d.ts +41 -0
  142. package/lib/mol-theme/color/structure-index.js +55 -0
  143. package/lib/mol-theme/color/trajectory-index.d.ts +41 -0
  144. package/lib/mol-theme/color/trajectory-index.js +65 -0
  145. package/lib/mol-theme/color.d.ts +75 -1
  146. package/lib/mol-theme/color.js +5 -1
  147. package/lib/mol-util/color/distinct.d.ts +1 -1
  148. package/lib/mol-util/color/distinct.js +3 -1
  149. package/lib/mol-util/fibonacci-heap.d.ts +136 -0
  150. package/lib/mol-util/fibonacci-heap.js +358 -0
  151. package/package.json +20 -20

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