molstar 2.3.8 → 2.3.9

package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts

@@ -26,7 +26,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
             height: number;
         }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "viewport"> | PD.NamedParams<PD.Normalize<unknown>, "hd"> | PD.NamedParams<PD.Normalize<unknown>, "full-hd"> | PD.NamedParams<PD.Normalize<unknown>, "ultra-hd">>;
         transparent: PD.BooleanParam;
-        axes: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
+        axes: PD.Mapped<PD.NamedParams<PD.Normalize<{
             alpha: number;
             ignoreLight: boolean;
             colorX: Color;
@@ -37,8 +37,8 @@ declare class ViewportScreenshotHelper extends PluginComponent {
             flipSided: boolean;
             flatShaded: boolean;
             xrayShaded: boolean;
-            quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
-        }>, "on">>;
+            quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
+        }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     };
     readonly behaviors: {
         values: import("rxjs").BehaviorSubject<PD.Values<{
@@ -47,7 +47,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
                 height: number;
             }>, "custom">>;
             transparent: PD.BooleanParam;
-            axes: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
+            axes: PD.Mapped<PD.NamedParams<PD.Normalize<{
                 alpha: number;
                 ignoreLight: boolean;
                 colorX: Color;
@@ -58,8 +58,8 @@ declare class ViewportScreenshotHelper extends PluginComponent {
                 flipSided: boolean;
                 flatShaded: boolean;
                 xrayShaded: boolean;
-                quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
-            }>, "on">>;
+                quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
+            }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
         }>>;
         cropParams: import("rxjs").BehaviorSubject<{
             auto: boolean;
@@ -76,7 +76,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
             height: number;
         }>, "custom">>;
         transparent: PD.BooleanParam;
-        axes: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
+        axes: PD.Mapped<PD.NamedParams<PD.Normalize<{
             alpha: number;
             ignoreLight: boolean;
             colorX: Color;
@@ -87,8 +87,8 @@ declare class ViewportScreenshotHelper extends PluginComponent {
             flipSided: boolean;
             flatShaded: boolean;
             xrayShaded: boolean;
-            quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
-        }>, "on">>;
+            quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
+        }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     }>;
     get cropParams(): {
         auto: boolean;

package/lib/commonjs/mol-plugin-state/actions/structure.d.ts

@@ -12,7 +12,7 @@ export declare const PdbDownloadProvider: {
         encoding: "bcif" | "cif";
     }>>;
     pdbe: PD.Group<PD.Normalize<{
-        variant: "updated" | "updated-bcif" | "updtaed-bcif" | "archival";
+        variant: "updated-bcif" | "updated" | "updtaed-bcif" | "archival";
     }>>;
 };
 export declare type PdbDownloadProvider = keyof typeof PdbDownloadProvider;

package/lib/commonjs/mol-plugin-state/animation/built-in/model-index.d.ts

@@ -12,10 +12,10 @@ export declare const AnimateModelIndex: PluginStateAnimation<{
         direction: any;
     }>, "once">;
     duration: PD.NamedParams<PD.Normalize<{
-        durationInS: any;
-    }>, "fixed"> | PD.NamedParams<PD.Normalize<{
         maxFps: any;
     }>, "sequential"> | PD.NamedParams<PD.Normalize<{
+        durationInS: any;
+    }>, "fixed"> | PD.NamedParams<PD.Normalize<{
         targetFps: any;
     }>, "computed">;
 }, {

package/lib/commonjs/mol-plugin-state/animation/helpers.d.ts

@@ -13,13 +13,13 @@ export declare function unwindStructureAssembly(structure: Structure, unitTransf
 export declare function explodeStructure(structure: Structure, unitTransforms: StructureUnitTransforms, t: number, sphere: Sphere3D): void;
 export declare const SpinStructureParams: {
     axis: PD.Mapped<PD.NamedParams<PD.Normalize<{
-        principalAxis: "dirA" | "dirB" | "dirC";
-    }>, "structure"> | PD.NamedParams<PD.Normalize<{
         vector: Vec3;
-    }>, "custom">>;
-    origin: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "structure"> | PD.NamedParams<PD.Normalize<{
+    }>, "custom"> | PD.NamedParams<PD.Normalize<{
+        principalAxis: "dirA" | "dirB" | "dirC";
+    }>, "structure">>;
+    origin: PD.Mapped<PD.NamedParams<PD.Normalize<{
         vector: Vec3;
-    }>, "custom">>;
+    }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "structure">>;
 };
 export declare type SpinStructureProps = PD.Values<typeof SpinStructureParams>;
 export declare function getSpinStructureAxisAndOrigin(structure: Structure, props: SpinStructureProps): {

package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts

@@ -50,14 +50,14 @@ export declare const PresetTrajectoryHierarchy: {
             dynamicBonds: any;
         }>, "auto"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
-            id: any;
-        }>, "assembly"> | PD.NamedParams<PD.Normalize<{
+        }>, "model"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
             ijkMin: any;
             ijkMax: any;
         }>, "symmetry"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
-        }>, "model"> | PD.NamedParams<PD.Normalize<{
+            id: any;
+        }>, "assembly"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
             radius: any;
         }>, "symmetry-mates"> | PD.NamedParams<PD.Normalize<{

package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts

@@ -32,14 +32,14 @@ export declare class TrajectoryHierarchyBuilder {
             dynamicBonds: any;
         }>, "auto"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
-            id: any;
-        }>, "assembly"> | PD.NamedParams<PD.Normalize<{
+        }>, "model"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
             ijkMin: any;
             ijkMax: any;
         }>, "symmetry"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
-        }>, "model"> | PD.NamedParams<PD.Normalize<{
+            id: any;
+        }>, "assembly"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
             radius: any;
         }>, "symmetry-mates"> | PD.NamedParams<PD.Normalize<{

package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts

@@ -29,11 +29,11 @@ export declare namespace StructureRepresentationPresetProvider {
     };
     const CommonParams: {
         ignoreHydrogens: PD.Base<boolean | undefined>;
-        quality: PD.Base<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined>;
+        quality: PD.Base<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined>;
         theme: PD.Base<PD.Normalize<{
-            globalName: "uniform" | "occupancy" | "element-index" | "element-symbol" | "carbohydrate-symbol" | "chain-id" | "operator-name" | "molecule-type" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "unit-index" | "uncertainty" | "entity-source" | "illustrative" | "hydrophobicity" | "model-index" | "operator-hkl" | "partial-charge" | "atom-id" | "entity-id" | undefined;
-            carbonColor: "element-symbol" | "chain-id" | "operator-name" | undefined;
-            symmetryColor: "uniform" | "occupancy" | "element-index" | "element-symbol" | "carbohydrate-symbol" | "chain-id" | "operator-name" | "molecule-type" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "unit-index" | "uncertainty" | "entity-source" | "illustrative" | "hydrophobicity" | "model-index" | "operator-hkl" | "partial-charge" | "atom-id" | "entity-id" | undefined;
+            globalName: "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "occupancy" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
+            carbonColor: "chain-id" | "operator-name" | "element-symbol" | undefined;
+            symmetryColor: "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "occupancy" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
             focus: PD.Normalize<{
                 name: any;
                 params: any;
@@ -44,37 +44,37 @@ export declare namespace StructureRepresentationPresetProvider {
     function reprBuilder(plugin: PluginContext, params: CommonParams, structure?: Structure): {
         update: import("../../../mol-state/state/builder").StateBuilder.Root;
         builder: import("./representation").StructureRepresentationBuilder;
-        color: "uniform" | "occupancy" | "element-index" | "element-symbol" | "carbohydrate-symbol" | "chain-id" | "operator-name" | "molecule-type" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "unit-index" | "uncertainty" | "entity-source" | "illustrative" | "hydrophobicity" | "model-index" | "operator-hkl" | "partial-charge" | "atom-id" | "entity-id" | undefined;
-        symmetryColor: "uniform" | "occupancy" | "element-index" | "element-symbol" | "carbohydrate-symbol" | "chain-id" | "operator-name" | "molecule-type" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "unit-index" | "uncertainty" | "entity-source" | "illustrative" | "hydrophobicity" | "model-index" | "operator-hkl" | "partial-charge" | "atom-id" | "entity-id" | undefined;
+        color: "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "occupancy" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
+        symmetryColor: "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "occupancy" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
         typeParams: {
-            quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+            quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
             ignoreHydrogens: boolean;
         };
         ballAndStickColor: Partial<PD.Values<{
-            carbonColor: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "element-symbol"> | PD.NamedParams<PD.Normalize<{
+            carbonColor: PD.Mapped<PD.NamedParams<PD.Normalize<{
                 palette: PD.NamedParams<PD.Normalize<{
+                    list: any;
+                }>, "colors"> | PD.NamedParams<PD.Normalize<{
                     maxCount: any;
                     hue: any;
                     chroma: any;
                     luminance: any;
                     clusteringStepCount: any;
                     minSampleCount: any;
-                }>, "generate"> | PD.NamedParams<PD.Normalize<{
-                    list: any;
-                }>, "colors">;
+                }>, "generate">;
                 asymId: "label" | "auth";
             }>, "chain-id"> | PD.NamedParams<PD.Normalize<{
                 palette: PD.NamedParams<PD.Normalize<{
+                    list: any;
+                }>, "colors"> | PD.NamedParams<PD.Normalize<{
                     maxCount: any;
                     hue: any;
                     chroma: any;
                     luminance: any;
                     clusteringStepCount: any;
                     minSampleCount: any;
-                }>, "generate"> | PD.NamedParams<PD.Normalize<{
-                    list: any;
-                }>, "colors">;
-            }>, "operator-name">>;
+                }>, "generate">;
+            }>, "operator-name"> | PD.NamedParams<PD.Normalize<unknown>, "element-symbol">>;
             saturation: PD.Numeric;
             lightness: PD.Numeric;
         }>>;
@@ -94,7 +94,7 @@ export declare const PresetStructureRepresentations: {
     empty: StructureRepresentationPresetProvider<unknown, {}>;
     auto: StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
+        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -123,7 +123,7 @@ export declare const PresetStructureRepresentations: {
     'atomic-detail': StructureRepresentationPresetProvider<{
         showCarbohydrateSymbol: boolean;
         ignoreHydrogens: boolean | undefined;
-        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
+        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -144,7 +144,7 @@ export declare const PresetStructureRepresentations: {
     }>;
     'polymer-cartoon': StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
+        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -164,7 +164,7 @@ export declare const PresetStructureRepresentations: {
     }>;
     'polymer-and-ligand': StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
+        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -199,7 +199,7 @@ export declare const PresetStructureRepresentations: {
     }>;
     'protein-and-nucleic': StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
+        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -221,7 +221,7 @@ export declare const PresetStructureRepresentations: {
     }>;
     'coarse-surface': StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
+        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;

package/lib/commonjs/mol-plugin-state/builder/structure/representation.d.ts

@@ -17,7 +17,7 @@ export declare class StructureRepresentationBuilder {
     private get dataState();
     readonly defaultProvider: StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
+        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;

package/lib/commonjs/mol-plugin-state/formats/volume.d.ts

@@ -71,14 +71,14 @@ export declare const CubeProvider: {
                 dynamicBonds: any;
             }>, "auto"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 dynamicBonds: any;
-                id: any;
-            }>, "assembly"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
+            }>, "model"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 dynamicBonds: any;
                 ijkMin: any;
                 ijkMax: any;
             }>, "symmetry"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 dynamicBonds: any;
-            }>, "model"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
+                id: any;
+            }>, "assembly"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 dynamicBonds: any;
                 radius: any;
             }>, "symmetry-mates"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
@@ -152,14 +152,14 @@ export declare const BuiltInVolumeFormats: readonly [readonly ["ccp4", {
                 dynamicBonds: any;
             }>, "auto"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 dynamicBonds: any;
-                id: any;
-            }>, "assembly"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
+            }>, "model"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 dynamicBonds: any;
                 ijkMin: any;
                 ijkMax: any;
             }>, "symmetry"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 dynamicBonds: any;
-            }>, "model"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
+                id: any;
+            }>, "assembly"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 dynamicBonds: any;
                 radius: any;
             }>, "symmetry-mates"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{

package/lib/commonjs/mol-plugin-state/helpers/root-structure.d.ts

@@ -16,14 +16,14 @@ export declare namespace RootStructureDefinition {
             dynamicBonds: boolean | undefined;
         }>, "auto"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: boolean | undefined;
-            id: string | undefined;
-        }>, "assembly"> | PD.NamedParams<PD.Normalize<{
+        }>, "model"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: boolean | undefined;
             ijkMin: Vec3;
             ijkMax: Vec3;
         }>, "symmetry"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: boolean | undefined;
-        }>, "model"> | PD.NamedParams<PD.Normalize<{
+            id: string | undefined;
+        }>, "assembly"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: boolean | undefined;
             radius: number;
         }>, "symmetry-mates"> | PD.NamedParams<PD.Normalize<{

package/lib/commonjs/mol-plugin-state/helpers/structure-component.d.ts

@@ -13,7 +13,7 @@ import { Script } from '../../mol-script/script';
 export declare const StaticStructureComponentTypes: readonly ["all", "polymer", "protein", "nucleic", "water", "ion", "lipid", "branched", "ligand", "non-standard", "coarse"];
 export declare type StaticStructureComponentType = (typeof StaticStructureComponentTypes)[number];
 export declare const StructureComponentParams: () => {
-    type: PD.Mapped<PD.NamedParams<"all" | "polymer" | "water" | "branched" | "ligand" | "ion" | "lipid" | "coarse" | "protein" | "nucleic" | "non-standard", "static"> | PD.NamedParams<Script, "script"> | PD.NamedParams<StructureElement.Bundle, "bundle"> | PD.NamedParams<Expression, "expression">>;
+    type: PD.Mapped<PD.NamedParams<Script, "script"> | PD.NamedParams<"all" | "polymer" | "water" | "branched" | "ligand" | "protein" | "nucleic" | "non-standard" | "coarse" | "ion" | "lipid", "static"> | PD.NamedParams<Expression, "expression"> | PD.NamedParams<StructureElement.Bundle, "bundle">>;
     nullIfEmpty: PD.Base<boolean | undefined>;
     label: PD.Text<string>;
 };
@@ -21,7 +21,7 @@ export declare type StructureComponentParams = PD.ValuesFor<ReturnType<typeof St
 export declare function createStructureComponent(a: Structure, params: StructureComponentParams, cache: {
     source: Structure;
     entry?: StructureQueryHelper.CacheEntry;
-}): StateObject<any, any> | SO.Molecule.Structure;
+}): SO.Molecule.Structure | StateObject<any, any>;
 export declare function updateStructureComponent(a: Structure, b: SO.Molecule.Structure, oldParams: StructureComponentParams, newParams: StructureComponentParams, cache: {
     source: Structure;
     entry?: StructureQueryHelper.CacheEntry;

package/lib/commonjs/mol-plugin-state/manager/interactivity.d.ts

@@ -37,7 +37,7 @@ declare class InteractivityManager extends StatefulPluginComponent<Interactivity
 }
 declare namespace InteractivityManager {
     const Params: {
-        granularity: PD.Select<"element" | "operator" | "residue" | "entity" | "model" | "structure" | "chain" | "elementInstances" | "residueInstances" | "chainInstances">;
+        granularity: PD.Select<"model" | "structure" | "residue" | "entity" | "chain" | "element" | "operator" | "elementInstances" | "residueInstances" | "chainInstances">;
     };
     type Params = typeof Params;
     type Props = PD.Values<Params>;

package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts

@@ -57,7 +57,7 @@ declare class StructureComponentManager extends StatefulPluginComponent<Structur
 declare namespace StructureComponentManager {
     const OptionsParams: {
         showHydrogens: PD.BooleanParam;
-        visualQuality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
+        visualQuality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
         interactions: PD.Group<PD.Normalize<{
             providers: PD.Normalize<{
                 ionic: any;
@@ -100,11 +100,11 @@ declare namespace StructureComponentManager {
         selection: PD.Select<StructureSelectionQuery>;
         action: PD.Mapped<PD.NamedParams<PD.Normalize<{
             color: import("../../../mol-util/color").Color;
-        }>, "color"> | PD.NamedParams<PD.Normalize<unknown>, "reset"> | PD.NamedParams<PD.Normalize<{
+        }>, "color"> | PD.NamedParams<PD.Normalize<{
             value: number;
         }>, "transparency"> | PD.NamedParams<PD.Normalize<{
             excludeGroups: ("one" | "two" | "three" | "four" | "five" | "six")[];
-        }>, "clipping">>;
+        }>, "clipping"> | PD.NamedParams<PD.Normalize<unknown>, "reset">>;
         representations: PD.MultiSelect<string>;
     };
     type ThemeParams = PD.Values<ReturnType<typeof getThemeParams>>;

package/lib/commonjs/mol-plugin-state/manager/structure/selection.d.ts

@@ -50,9 +50,9 @@ export declare class StructureSelectionManager extends StatefulPluginComponent<S
     private onUpdate;
     /** Removes all selections and returns them */
     clear(): StructureElement.Loci[];
-    getLoci(structure: Structure): StructureElement.Loci | {
+    getLoci(structure: Structure): {
         kind: "empty-loci";
-    };
+    } | StructureElement.Loci;
     getStructure(structure: Structure): Structure | undefined;
     structureHasSelection(structure: StructureRef): boolean;
     has(loci: Loci): boolean;

package/lib/commonjs/mol-plugin-state/transforms/data.d.ts

@@ -42,7 +42,7 @@ declare const DownloadBlob: StateTransformer<SO.Root, SO.Data.Blob, PD.Normalize
 }>>;
 declare type RawData = typeof RawData;
 declare const RawData: StateTransformer<SO.Root, SO.Data.String | SO.Data.Binary, PD.Normalize<{
-    data: string | ArrayBuffer | Uint8Array | number[];
+    data: string | Uint8Array | number[] | ArrayBuffer;
     label: string | undefined;
 }>>;
 declare type ReadFile = typeof ReadFile;

package/lib/commonjs/mol-plugin-state/transforms/model.d.ts

@@ -86,14 +86,14 @@ declare const StructureFromModel: StateTransformer<SO.Molecule.Model, SO.Molecul
         dynamicBonds: any;
     }>, "auto"> | PD.NamedParams<PD.Normalize<{
         dynamicBonds: any;
-        id: any;
-    }>, "assembly"> | PD.NamedParams<PD.Normalize<{
+    }>, "model"> | PD.NamedParams<PD.Normalize<{
         dynamicBonds: any;
         ijkMin: any;
         ijkMax: any;
     }>, "symmetry"> | PD.NamedParams<PD.Normalize<{
         dynamicBonds: any;
-    }>, "model"> | PD.NamedParams<PD.Normalize<{
+        id: any;
+    }>, "assembly"> | PD.NamedParams<PD.Normalize<{
         dynamicBonds: any;
         radius: any;
     }>, "symmetry-mates"> | PD.NamedParams<PD.Normalize<{
@@ -154,11 +154,11 @@ export declare const StructureComplexElementTypes: {
 export declare type StructureComplexElementTypes = keyof typeof StructureComplexElementTypes;
 declare type StructureComplexElement = typeof StructureComplexElement;
 declare const StructureComplexElement: StateTransformer<SO.Molecule.Structure, SO.Molecule.Structure, PD.Normalize<{
-    type: "spheres" | "polymer" | "water" | "branched" | "ligand" | "coarse" | "protein" | "nucleic" | "non-standard" | "atomic-sequence" | "atomic-het";
+    type: "spheres" | "polymer" | "water" | "branched" | "ligand" | "protein" | "nucleic" | "non-standard" | "coarse" | "atomic-sequence" | "atomic-het";
 }>>;
 declare type StructureComponent = typeof StructureComponent;
 declare const StructureComponent: StateTransformer<SO.Molecule.Structure, SO.Molecule.Structure, PD.Normalize<{
-    type: PD.NamedParams<"all" | "polymer" | "water" | "branched" | "ligand" | "ion" | "lipid" | "coarse" | "protein" | "nucleic" | "non-standard", "static"> | PD.NamedParams<Script, "script"> | PD.NamedParams<StructureElement.Bundle, "bundle"> | PD.NamedParams<Expression, "expression">;
+    type: PD.NamedParams<Script, "script"> | PD.NamedParams<"all" | "polymer" | "water" | "branched" | "ligand" | "protein" | "nucleic" | "non-standard" | "coarse" | "ion" | "lipid", "static"> | PD.NamedParams<Expression, "expression"> | PD.NamedParams<StructureElement.Bundle, "bundle">;
     nullIfEmpty: boolean | undefined;
     label: string;
 }>>;

package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts

@@ -45,13 +45,13 @@ declare const ExplodeStructureRepresentation3D: StateTransformer<SO.Molecule.Str
 declare type SpinStructureRepresentation3D = typeof SpinStructureRepresentation3D;
 declare const SpinStructureRepresentation3D: StateTransformer<SO.Molecule.Structure.Representation3D, SO.Molecule.Structure.Representation3DState, PD.Normalize<{
     axis: PD.NamedParams<PD.Normalize<{
-        principalAxis: any;
-    }>, "structure"> | PD.NamedParams<PD.Normalize<{
         vector: any;
-    }>, "custom">;
-    origin: PD.NamedParams<PD.Normalize<unknown>, "structure"> | PD.NamedParams<PD.Normalize<{
+    }>, "custom"> | PD.NamedParams<PD.Normalize<{
+        principalAxis: any;
+    }>, "structure">;
+    origin: PD.NamedParams<PD.Normalize<{
         vector: any;
-    }>, "custom">;
+    }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "structure">;
     t: number;
 }>>;
 declare type OverpaintStructureRepresentation3DFromScript = typeof OverpaintStructureRepresentation3DFromScript;
@@ -118,14 +118,14 @@ declare const ModelUnitcell3D: StateTransformer<SO.Molecule.Model, SO.Shape.Repr
     cellColor: Color;
     cellScale: number;
     ref: "origin" | "model";
-    attachment: "center" | "corner";
+    attachment: "corner" | "center";
     doubleSided: boolean;
     flipSided: boolean;
     flatShaded: boolean;
     ignoreLight: boolean;
     xrayShaded: boolean;
     alpha: number;
-    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
 }>>;
 export { StructureBoundingBox3D };
 declare type StructureBoundingBox3D = typeof StructureBoundingBox3D;
@@ -136,7 +136,7 @@ declare const StructureBoundingBox3D: StateTransformer<SO.Molecule.Structure, SO
     ignoreLight: boolean;
     xrayShaded: boolean;
     alpha: number;
-    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
     radius: number;
     color: Color;
 }>>;
@@ -168,7 +168,7 @@ declare const StructureSelectionsDistance3D: StateTransformer<SO.Molecule.Struct
     fontVariant: import("../../mol-geo/geometry/text/font-atlas").FontVariant;
     fontWeight: import("../../mol-geo/geometry/text/font-atlas").FontWeight;
     alpha: number;
-    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
     lineSizeAttenuation: boolean;
     linesColor: Color;
     linesSize: number;
@@ -201,7 +201,7 @@ declare const StructureSelectionsAngle3D: StateTransformer<SO.Molecule.Structure
     fontVariant: import("../../mol-geo/geometry/text/font-atlas").FontVariant;
     fontWeight: import("../../mol-geo/geometry/text/font-atlas").FontWeight;
     alpha: number;
-    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
     ignoreLight: boolean;
     sectorOpacity: number;
     color: Color;
@@ -241,7 +241,7 @@ declare const StructureSelectionsDihedral3D: StateTransformer<SO.Molecule.Struct
     fontVariant: import("../../mol-geo/geometry/text/font-atlas").FontVariant;
     fontWeight: import("../../mol-geo/geometry/text/font-atlas").FontWeight;
     alpha: number;
-    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
     ignoreLight: boolean;
     sectorOpacity: number;
     color: Color;
@@ -282,12 +282,12 @@ declare const StructureSelectionsLabel3D: StateTransformer<SO.Molecule.Structure
     fontVariant: import("../../mol-geo/geometry/text/font-atlas").FontVariant;
     fontWeight: import("../../mol-geo/geometry/text/font-atlas").FontWeight;
     alpha: number;
-    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
 }>>;
 export { StructureSelectionsOrientation3D };
 declare type StructureSelectionsOrientation3D = typeof StructureSelectionsOrientation3D;
 declare const StructureSelectionsOrientation3D: StateTransformer<SO.Molecule.Structure.Selections, SO.Shape.Representation3D, PD.Normalize<{
-    visuals: ("box" | "axes" | "ellipsoid")[];
+    visuals: ("axes" | "ellipsoid" | "box")[];
     color: Color;
     scaleFactor: number;
     radiusScale: number;
@@ -297,7 +297,7 @@ declare const StructureSelectionsOrientation3D: StateTransformer<SO.Molecule.Str
     ignoreLight: boolean;
     xrayShaded: boolean;
     alpha: number;
-    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
 }>>;
 export { StructureSelectionsPlane3D };
 declare type StructureSelectionsPlane3D = typeof StructureSelectionsPlane3D;
@@ -311,5 +311,5 @@ declare const StructureSelectionsPlane3D: StateTransformer<SO.Molecule.Structure
     ignoreLight: boolean;
     xrayShaded: boolean;
     alpha: number;
-    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
+    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
 }>>;

package/lib/commonjs/mol-plugin-ui/controls/parameters.d.ts

@@ -186,7 +186,7 @@ export declare class ColorListControl extends React.PureComponent<ParamProps<PD.
 }> {
     state: {
         showHelp: boolean;
-        show: "edit" | "presets" | undefined;
+        show: "presets" | "edit" | undefined;
     };
     protected update(value: PD.ColorList['defaultValue']): void;
     toggleEdit: () => void;
@@ -205,7 +205,7 @@ export declare class OffsetColorListControl extends React.PureComponent<ParamPro
 }> {
     state: {
         showHelp: boolean;
-        show: "edit" | "presets" | undefined;
+        show: "presets" | "edit" | undefined;
     };
     protected update(value: PD.ColorList['defaultValue']): void;
     toggleEdit: () => void;

package/lib/commonjs/mol-plugin-ui/structure/measurements.d.ts

@@ -33,7 +33,7 @@ export declare class MeasurementControls extends PurePluginUIComponent<{}, {
 }> {
     state: {
         isBusy: boolean;
-        action: "add" | "options" | undefined;
+        action: "options" | "add" | undefined;
     };
     componentDidMount(): void;
     componentWillUnmount(): void;

package/lib/commonjs/mol-repr/shape/loci/angle.d.ts

@@ -34,7 +34,7 @@ export declare const AngleParams: {
     fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
     fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
     alpha: PD.Numeric;
-    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
+    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
     ignoreLight: PD.BooleanParam;
     sectorOpacity: PD.Numeric;
     color: PD.Color;

package/lib/commonjs/mol-repr/shape/loci/common.d.ts

@@ -34,6 +34,6 @@ export declare const LociLabelTextParams: {
     fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
     fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
     alpha: PD.Numeric;
-    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
+    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
 };
 export declare type LociLabelTextParams = typeof LociLabelTextParams;