moflo 4.6.3 → 4.6.5

package/bin/build-embeddings.mjs

@@ -282,7 +282,9 @@ function getEntriesNeedingEmbeddings(db, namespace = null, forceAll = false) {
   const params = [];
 
   if (!forceAll) {
-    sql += ` AND (embedding IS NULL OR embedding = '')`;
+    // Include entries with no embedding OR entries with hash/fallback embeddings
+    // that should be upgraded to Xenova when available
+    sql += ` AND (embedding IS NULL OR embedding = '' OR embedding_model IN ('domain-aware-hash-v1', 'hash-fallback', 'local'))`;
   }
 
   if (namespace) {
@@ -408,7 +410,22 @@ async function main() {
   const stats = getEmbeddingStats(db);
 
   // Write changes back to disk (sql.js operates in-memory)
-  if (embedded > 0) saveDb(db);
+  if (embedded > 0) {
+    saveDb(db);
+
+    // Delete stale HNSW index so the CLI rebuilds from fresh vectors
+    const hnswPaths = [
+      resolve(projectRoot, '.swarm/hnsw.index'),
+      resolve(projectRoot, '.swarm/hnsw.metadata.json'),
+    ];
+    for (const p of hnswPaths) {
+      if (existsSync(p)) {
+        const { unlinkSync } = await import('fs');
+        unlinkSync(p);
+        log(`Deleted stale HNSW index: ${p}`);
+      }
+    }
+  }
   db.close();
 
   console.log('');

package/bin/generate-code-map.mjs

@@ -665,20 +665,26 @@ async function main() {
   const elapsed = ((Date.now() - startTime) / 1000).toFixed(1);
   log(`Done in ${elapsed}s — ${allChunks.length} chunks written to code-map namespace`);
 
-  // 7. Trigger embedding generation in background
+  // 7. Generate embeddings inline (not detached — ensures Xenova runs reliably)
   if (!skipEmbeddings) {
-    // Look for build-embeddings script in project's .claude/scripts/
-    const embedScript = resolve(projectRoot, '.claude/scripts/build-embeddings.mjs');
-    if (existsSync(embedScript)) {
-      log('Starting background embedding generation...');
-      const proc = spawn('node', [embedScript, '--namespace', 'code-map'], {
-        cwd: projectRoot,
-        stdio: 'ignore',
-        detached: true,
-        shell: false,
-        windowsHide: true,
-      });
-      proc.unref();
+    // Prefer moflo's own bin script, fall back to project's .claude/scripts/
+    const embedCandidates = [
+      resolve(dirname(fileURLToPath(import.meta.url)), 'build-embeddings.mjs'),
+      resolve(projectRoot, '.claude/scripts/build-embeddings.mjs'),
+    ];
+    const embedScript = embedCandidates.find(p => existsSync(p));
+    if (embedScript) {
+      log('Generating embeddings for code-map...');
+      try {
+        execSync(`node "${embedScript}" --namespace code-map`, {
+          cwd: projectRoot,
+          stdio: 'inherit',
+          timeout: 120000,
+          windowsHide: true,
+        });
+      } catch (err) {
+        log(`Warning: embedding generation failed: ${err.message?.split('\n')[0]}`);
+      }
     }
   }
 }

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "moflo",
-  "version": "4.6.3",
+  "version": "4.6.5",
   "description": "MoFlo — AI agent orchestration for Claude Code. Forked from ruflo/claude-flow with patches applied to source, plus feature-level orchestration.",
   "main": "dist/index.js",
   "type": "module",

package/src/@claude-flow/cli/dist/src/commands/doctor.js

@@ -131,30 +131,6 @@ async function checkMemoryDatabase() {
     }
     return { name: 'Memory Database', status: 'warn', message: 'Not initialized', fix: 'claude-flow memory configure --backend hybrid' };
 }
-// Check API keys
-async function checkApiKeys() {
-    const keys = ['ANTHROPIC_API_KEY', 'CLAUDE_API_KEY', 'OPENAI_API_KEY'];
-    const found = [];
-    for (const key of keys) {
-        if (process.env[key]) {
-            found.push(key);
-        }
-    }
-    // Detect Claude Code environment — API keys are managed internally
-    const inClaudeCode = !!(process.env.CLAUDE_CODE || process.env.CLAUDE_PROJECT_DIR || process.env.MCP_SESSION_ID);
-    if (found.includes('ANTHROPIC_API_KEY') || found.includes('CLAUDE_API_KEY')) {
-        return { name: 'API Keys', status: 'pass', message: `Found: ${found.join(', ')}` };
-    }
-    else if (inClaudeCode) {
-        return { name: 'API Keys', status: 'pass', message: 'Claude Code (managed internally)' };
-    }
-    else if (found.length > 0) {
-        return { name: 'API Keys', status: 'warn', message: `Found: ${found.join(', ')} (no Claude key)`, fix: 'export ANTHROPIC_API_KEY=your_key' };
-    }
-    else {
-        return { name: 'API Keys', status: 'warn', message: 'No API keys found', fix: 'export ANTHROPIC_API_KEY=your_key' };
-    }
-}
 // Check git (async with proper env inheritance)
 async function checkGit() {
     try {
@@ -491,7 +467,6 @@ export const doctorCommand = {
             checkConfigFile,
             checkDaemonStatus,
             checkMemoryDatabase,
-            checkApiKeys,
             checkMcpServers,
             checkDiskSpace,
             checkBuildTools,
@@ -506,7 +481,6 @@ export const doctorCommand = {
             'config': checkConfigFile,
             'daemon': checkDaemonStatus,
             'memory': checkMemoryDatabase,
-            'api': checkApiKeys,
             'git': checkGit,
             'mcp': checkMcpServers,
             'disk': checkDiskSpace,

package/src/@claude-flow/cli/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@moflo/cli",
-  "version": "4.6.3",
+  "version": "4.6.5",
   "type": "module",
   "description": "MoFlo CLI — AI agent orchestration with specialized agents, swarm coordination, MCP server, self-learning hooks, and vector memory for Claude Code",
   "main": "dist/src/index.js",