moflo 4.3.1 → 4.6.0

package/bin/semantic-search.mjs

@@ -8,10 +8,10 @@
  *
  * Usage:
  *   node node_modules/moflo/bin/semantic-search.mjs "your search query"
- *   npx moflo-search "your search query"
- *   npx moflo-search "query" --limit 10
- *   npx moflo-search "query" --namespace guidance
- *   npx moflo-search "query" --threshold 0.3
+ *   npx flo-search "your search query"
+ *   npx flo-search "query" --limit 10
+ *   npx flo-search "query" --namespace guidance
+ *   npx flo-search "query" --threshold 0.3
  */
 
 import { existsSync, readFileSync } from 'fs';
@@ -45,7 +45,7 @@ const json = args.includes('--json');
 const debug = args.includes('--debug');
 
 if (!query) {
-  console.error('Usage: npx moflo-search "your query" [--limit N] [--namespace X] [--threshold N]');
+  console.error('Usage: npx flo-search "your query" [--limit N] [--namespace X] [--threshold N]');
   process.exit(1);
 }
 
@@ -262,7 +262,7 @@ async function generateQueryEmbedding(queryText, db) {
     // Neural failed — warn about model mismatch
     if (!json) {
       console.error('[semantic-search] WARNING: Stored embeddings use neural model but Transformers.js unavailable.');
-      console.error('[semantic-search] Results may be poor. Run: npx moflo-embeddings --force');
+      console.error('[semantic-search] Results may be poor. Run: npx flo-embeddings --force');
     }
   }
 

package/bin/setup-project.mjs

@@ -6,9 +6,9 @@
  * adds a CLAUDE.md section so subagents automatically follow the protocol.
  *
  * Usage:
- *   npx moflo-setup            # First-time setup
- *   npx moflo-setup --update   # Refresh bootstrap file after moflo upgrade
- *   npx moflo-setup --check    # Check if setup is current
+ *   npx flo-setup            # First-time setup
+ *   npx flo-setup --update   # Refresh bootstrap file after moflo upgrade
+ *   npx flo-setup --check    # Check if setup is current
  *
  * What it does:
  *   1. Copies .claude/guidance/agent-bootstrap.md → project's .claude/guidance/moflo-bootstrap.md
@@ -68,10 +68,10 @@ Load via ToolSearch first: \`+claude-flow memory\`
 
 ### Fallback: CLI Scripts
 \`\`\`bash
-npx moflo-search "[query]" --namespace guidance   # Semantic search
-npx moflo-embeddings                               # Rebuild embeddings
-npx moflo-index                                    # Re-index guidance docs
-npx moflo-codemap --force                          # Regenerate code-map
+npx flo-search "[query]" --namespace guidance   # Semantic search
+npx flo-embeddings                               # Rebuild embeddings
+npx flo-index                                    # Re-index guidance docs
+npx flo-codemap --force                          # Regenerate code-map
 \`\`\`
 
 ### Where Content Goes
@@ -93,7 +93,7 @@ If \`.claude/guidance/agent-bootstrap.md\` also exists, read it next for project
 ${MARKER_END}`;
 
 function log(msg) {
-  console.log(`[moflo-setup] ${msg}`);
+  console.log(`[flo-setup] ${msg}`);
 }
 
 function findProjectRoot() {
@@ -135,7 +135,7 @@ function copyBootstrap(projectRoot) {
 
   // Read source content and prepend auto-generated notice
   const content = readFileSync(source, 'utf-8');
-  const header = `<!-- AUTO-GENERATED by moflo-setup. Do not edit — changes will be overwritten. -->
+  const header = `<!-- AUTO-GENERATED by flo-setup. Do not edit — changes will be overwritten. -->
 <!-- Source: node_modules/moflo/.claude/guidance/agent-bootstrap.md -->
 <!-- To customize, create .claude/guidance/agent-bootstrap.md for project-specific rules. -->
 

package/package.json

@@ -1,17 +1,18 @@
 {
   "name": "moflo",
-  "version": "4.3.1",
+  "version": "4.6.0",
   "description": "MoFlo — AI agent orchestration for Claude Code. Forked from ruflo/claude-flow with patches applied to source, plus feature-level orchestration.",
   "main": "dist/index.js",
   "type": "module",
   "bin": {
+    "flo": "bin/cli.js",
+    "flo-setup": "bin/setup-project.mjs",
+    "flo-codemap": "bin/generate-code-map.mjs",
+    "flo-search": "bin/semantic-search.mjs",
+    "flo-embeddings": "bin/build-embeddings.mjs",
+    "flo-index": "bin/index-guidance.mjs",
+    "flo-learn": ".claude/helpers/learning-service.mjs",
     "moflo": "bin/cli.js",
-    "moflo-setup": "bin/setup-project.mjs",
-    "moflo-codemap": "bin/generate-code-map.mjs",
-    "moflo-search": "bin/semantic-search.mjs",
-    "moflo-embeddings": "bin/build-embeddings.mjs",
-    "moflo-index": "bin/index-guidance.mjs",
-    "moflo-learn": ".claude/helpers/learning-service.mjs",
     "claude-flow": "bin/cli.js"
   },
   "homepage": "https://github.com/eric-cielo/moflo#readme",

package/src/@claude-flow/cli/dist/src/commands/appliance.js

@@ -83,7 +83,7 @@ const buildCommand = {
             return { success: false, exitCode: 1 };
         const steps = [
             'Collecting kernel artifacts', 'Bundling runtime environment',
-            'Packaging ruflo CLI + MCP tools', 'Compressing sections',
+            'Packaging flo CLI + MCP tools', 'Compressing sections',
             'Computing SHA-256 checksums', 'Writing RVFA container',
         ];
         if (profile !== 'cloud' && models.length > 0)
@@ -365,19 +365,19 @@ export const applianceCommand = {
     aliases: ['rvfa'],
     subcommands: [buildCommand, inspectCommand, verifyCommand, extractCommand, runCommand, signCommand, publishCommand, updateAppCommand],
     examples: [
-        { command: 'ruflo appliance build -p cloud', description: 'Build a cloud appliance' },
-        { command: 'ruflo appliance inspect -f ruflo.rvf', description: 'Inspect appliance contents' },
-        { command: 'ruflo appliance verify -f ruflo.rvf', description: 'Verify integrity' },
-        { command: 'ruflo appliance extract -f ruflo.rvf', description: 'Extract sections' },
-        { command: 'ruflo appliance run -f ruflo.rvf', description: 'Boot and run appliance' },
-        { command: 'ruflo appliance sign -f ruflo.rvf --generate-keys', description: 'Generate keys and sign' },
-        { command: 'ruflo appliance publish -f ruflo.rvf', description: 'Publish to IPFS via Pinata' },
-        { command: 'ruflo appliance update -f ruflo.rvf -s ruflo -d ./new-ruflo.bin', description: 'Hot-patch a section' },
+        { command: 'flo appliance build -p cloud', description: 'Build a cloud appliance' },
+        { command: 'flo appliance inspect -f ruflo.rvf', description: 'Inspect appliance contents' },
+        { command: 'flo appliance verify -f ruflo.rvf', description: 'Verify integrity' },
+        { command: 'flo appliance extract -f ruflo.rvf', description: 'Extract sections' },
+        { command: 'flo appliance run -f ruflo.rvf', description: 'Boot and run appliance' },
+        { command: 'flo appliance sign -f ruflo.rvf --generate-keys', description: 'Generate keys and sign' },
+        { command: 'flo appliance publish -f ruflo.rvf', description: 'Publish to IPFS via Pinata' },
+        { command: 'flo appliance update -f ruflo.rvf -s ruflo -d ./new-ruflo.bin', description: 'Hot-patch a section' },
     ],
     action: async () => {
         output.writeln();
-        output.writeln(output.bold('Ruflo Appliance (RVFA)'));
-        output.writeln(output.dim('Self-contained deployment format for the full Ruflo platform.'));
+        output.writeln(output.bold('MoFlo Appliance (RVFA)'));
+        output.writeln(output.dim('Self-contained deployment format for the full MoFlo platform.'));
         output.writeln();
         output.writeln('Subcommands:');
         output.printList([
@@ -398,7 +398,7 @@ export const applianceCommand = {
             `${output.bold('offline')}  - Fully air-gapped with bundled models (~4 GB)`,
         ]);
         output.writeln();
-        output.writeln(output.dim('Use "ruflo appliance <subcommand> --help" for details.'));
+        output.writeln(output.dim('Use "flo appliance <subcommand> --help" for details.'));
         return { success: true };
     },
 };

package/src/@claude-flow/cli/dist/src/commands/benchmark.js

@@ -371,7 +371,7 @@ const allCommand = {
     action: async (ctx) => {
         output.writeln();
         output.writeln(output.bold(output.highlight('═'.repeat(65))));
-        output.writeln(output.bold('  RuFlo V3 - Full Benchmark Suite'));
+        output.writeln(output.bold('  MoFlo V4 - Full Benchmark Suite'));
         output.writeln(output.bold(output.highlight('═'.repeat(65))));
         const startTime = Date.now();
         const allResults = {};
@@ -439,7 +439,7 @@ export const benchmarkCommand = {
     ],
     action: async (_ctx) => {
         output.writeln();
-        output.writeln(output.bold('RuFlo V3 Benchmark Suite'));
+        output.writeln(output.bold('MoFlo V4 Benchmark Suite'));
         output.writeln(output.dim('─'.repeat(50)));
         output.writeln();
         output.writeln('Available subcommands:');

package/src/@claude-flow/cli/dist/src/commands/claims.js

@@ -344,7 +344,7 @@ export const claimsCommand = {
     ],
     action: async () => {
         output.writeln();
-        output.writeln(output.bold('RuFlo Claims System'));
+        output.writeln(output.bold('MoFlo Claims System'));
         output.writeln(output.dim('Fine-grained authorization and access control'));
         output.writeln();
         output.writeln('Subcommands:');

package/src/@claude-flow/cli/dist/src/commands/config.js

@@ -33,7 +33,7 @@ const initCommand = {
         const sparc = ctx.flags.sparc;
         const v3 = ctx.flags.v3;
         output.writeln();
-        output.printInfo('Initializing RuFlo configuration...');
+        output.printInfo('Initializing MoFlo configuration...');
         output.writeln();
         // Create default configuration
         const config = {
@@ -380,7 +380,7 @@ const showCommand = {
         { name: 'format', short: 'f', description: 'Output format (json or yaml)', type: 'string', default: 'json' },
     ],
     examples: [
-        { command: 'moflo config show', description: 'Show merged config as JSON' },
+        { command: 'flo config show', description: 'Show merged config as JSON' },
     ],
     action: async (ctx) => {
         const { loadMofloConfig } = await import('../config/moflo-config.js');
@@ -395,7 +395,7 @@ const generateCommand = {
     description: 'Generate moflo.yaml config file',
     options: [],
     examples: [
-        { command: 'moflo config generate', description: 'Auto-detect and write moflo.yaml' },
+        { command: 'flo config generate', description: 'Auto-detect and write moflo.yaml' },
     ],
     action: async (_ctx) => {
         const { writeMofloConfig } = await import('../config/moflo-config.js');

package/src/@claude-flow/cli/dist/src/commands/daemon.js

@@ -86,6 +86,28 @@ const startCommand = {
             if (!fs.existsSync(stateDir)) {
                 fs.mkdirSync(stateDir, { recursive: true });
             }
+            // Check if another foreground daemon is already running (prevents duplicate daemons)
+            if (fs.existsSync(pidFile)) {
+                try {
+                    const existingPid = parseInt(fs.readFileSync(pidFile, 'utf-8').trim(), 10);
+                    if (!isNaN(existingPid) && existingPid !== process.pid) {
+                        try {
+                            process.kill(existingPid, 0); // Check if alive
+                            // Another daemon is running — exit silently
+                            if (!quiet) {
+                                output.printWarning(`Daemon already running (PID: ${existingPid})`);
+                            }
+                            return { success: true };
+                        }
+                        catch {
+                            // Process not running — stale PID file, continue startup
+                        }
+                    }
+                }
+                catch {
+                    // Can't read PID file — continue startup
+                }
+            }
             // Write PID file for foreground mode
             fs.writeFileSync(pidFile, String(process.pid));
             // Clean up PID file on exit
@@ -418,7 +440,7 @@ const statusCommand = {
                 `Max Concurrent: ${status.config.maxConcurrent}`,
                 `Max CPU Load: ${status.config.resourceThresholds.maxCpuLoad}`,
                 `Min Free Memory: ${status.config.resourceThresholds.minFreeMemoryPercent}%`,
-            ].filter(Boolean).join('\n'), 'RuFlo Daemon');
+            ].filter(Boolean).join('\n'), 'MoFlo Daemon');
             output.writeln();
             output.writeln(output.bold('Worker Status'));
             const workerData = status.config.workers.map(w => {
@@ -489,7 +511,7 @@ const statusCommand = {
                 `Status: ${output.error('○')} ${output.error('NOT INITIALIZED')}`,
                 '',
                 'Run "claude-flow daemon start" to start the daemon',
-            ].join('\n'), 'RuFlo Daemon');
+            ].join('\n'), 'MoFlo Daemon');
             return { success: true };
         }
     },
@@ -614,7 +636,7 @@ export const daemonCommand = {
     ],
     action: async () => {
         output.writeln();
-        output.writeln(output.bold('RuFlo Daemon - Background Task Management'));
+        output.writeln(output.bold('MoFlo Daemon - Background Task Management'));
         output.writeln();
         output.writeln('Node.js-based background worker system that auto-runs like shell daemons.');
         output.writeln('Manages 12 specialized workers for continuous optimization and monitoring.');

package/src/@claude-flow/cli/dist/src/commands/deployment.js

@@ -260,7 +260,7 @@ export const deploymentCommand = {
     ],
     action: async () => {
         output.writeln();
-        output.writeln(output.bold('RuFlo Deployment'));
+        output.writeln(output.bold('MoFlo Deployment'));
         output.writeln(output.dim('Multi-environment deployment management'));
         output.writeln();
         output.writeln('Subcommands:');

package/src/@claude-flow/cli/dist/src/commands/doctor.js

@@ -59,12 +59,13 @@ async function checkNpmVersion() {
 }
 // Check config file
 async function checkConfigFile() {
-    const configPaths = [
+    // JSON configs (parse-validated)
+    const jsonPaths = [
         '.claude-flow/config.json',
         'claude-flow.config.json',
         '.claude-flow.json'
     ];
-    for (const configPath of configPaths) {
+    for (const configPath of jsonPaths) {
         if (existsSync(configPath)) {
             try {
                 const content = readFileSync(configPath, 'utf8');
@@ -76,6 +77,17 @@ async function checkConfigFile() {
             }
         }
     }
+    // YAML configs (existence-checked only — no heavy yaml parser dependency)
+    const yamlPaths = [
+        '.claude-flow/config.yaml',
+        '.claude-flow/config.yml',
+        'claude-flow.config.yaml'
+    ];
+    for (const configPath of yamlPaths) {
+        if (existsSync(configPath)) {
+            return { name: 'Config File', status: 'pass', message: `Found: ${configPath}` };
+        }
+    }
     return { name: 'Config File', status: 'warn', message: 'No config file (using defaults)', fix: 'claude-flow config init' };
 }
 // Check daemon status
@@ -128,9 +140,14 @@ async function checkApiKeys() {
             found.push(key);
         }
     }
+    // Detect Claude Code environment — API keys are managed internally
+    const inClaudeCode = !!(process.env.CLAUDE_CODE || process.env.CLAUDE_PROJECT_DIR || process.env.MCP_SESSION_ID);
     if (found.includes('ANTHROPIC_API_KEY') || found.includes('CLAUDE_API_KEY')) {
         return { name: 'API Keys', status: 'pass', message: `Found: ${found.join(', ')}` };
     }
+    else if (inClaudeCode) {
+        return { name: 'API Keys', status: 'pass', message: 'Claude Code (managed internally)' };
+    }
     else if (found.length > 0) {
         return { name: 'API Keys', status: 'warn', message: `Found: ${found.join(', ')} (no Claude key)`, fix: 'export ANTHROPIC_API_KEY=your_key' };
     }
@@ -171,12 +188,12 @@ async function checkMcpServers() {
                 const content = JSON.parse(readFileSync(configPath, 'utf8'));
                 const servers = content.mcpServers || content.servers || {};
                 const count = Object.keys(servers).length;
-                const hasClaudeFlow = 'claude-flow' in servers || 'claude-flow_alpha' in servers;
+                const hasClaudeFlow = 'claude-flow' in servers || 'claude-flow_alpha' in servers || 'ruflo' in servers || 'ruflo_alpha' in servers;
                 if (hasClaudeFlow) {
-                    return { name: 'MCP Servers', status: 'pass', message: `${count} servers (claude-flow configured)` };
+                    return { name: 'MCP Servers', status: 'pass', message: `${count} servers (flo configured)` };
                 }
                 else {
-                    return { name: 'MCP Servers', status: 'warn', message: `${count} servers (claude-flow not found)`, fix: 'claude mcp add claude-flow npx @claude-flow/cli@v3alpha mcp start' };
+                    return { name: 'MCP Servers', status: 'warn', message: `${count} servers (flo not found)`, fix: 'claude mcp add ruflo -- npx -y ruflo@latest mcp start' };
                 }
             }
             catch {
@@ -460,7 +477,7 @@ export const doctorCommand = {
         const component = ctx.flags.component;
         const verbose = ctx.flags.verbose;
         output.writeln();
-        output.writeln(output.bold('RuFlo Doctor'));
+        output.writeln(output.bold('MoFlo Doctor'));
         output.writeln(output.dim('System diagnostics and health check'));
         output.writeln(output.dim('─'.repeat(50)));
         output.writeln();

package/src/@claude-flow/cli/dist/src/commands/embeddings.js

@@ -1536,7 +1536,7 @@ export const embeddingsCommand = {
     ],
     action: async () => {
         output.writeln();
-        output.writeln(output.bold('RuFlo Embeddings'));
+        output.writeln(output.bold('MoFlo Embeddings'));
         output.writeln(output.dim('Vector embeddings and semantic search'));
         output.writeln();
         output.writeln('Core Commands:');

package/src/@claude-flow/cli/dist/src/commands/gate.d.ts

@@ -8,14 +8,14 @@
  * - Context bracket tracking (FRESH/MODERATE/DEPLETED/CRITICAL)
  *
  * Usage from hooks:
- *   npx moflo gate check-before-scan
- *   npx moflo gate check-before-read
- *   npx moflo gate check-before-agent
- *   npx moflo gate record-task-created
- *   npx moflo gate record-memory-searched
- *   npx moflo gate check-bash-memory
- *   npx moflo gate prompt-reminder
- *   npx moflo gate session-reset
+ *   npx flo gate check-before-scan
+ *   npx flo gate check-before-read
+ *   npx flo gate check-before-agent
+ *   npx flo gate record-task-created
+ *   npx flo gate record-memory-searched
+ *   npx flo gate check-bash-memory
+ *   npx flo gate prompt-reminder
+ *   npx flo gate session-reset
  */
 import type { Command } from '../types.js';
 declare const gateCommand: Command;

package/src/@claude-flow/cli/dist/src/commands/gate.js

@@ -8,14 +8,14 @@
  * - Context bracket tracking (FRESH/MODERATE/DEPLETED/CRITICAL)
  *
  * Usage from hooks:
- *   npx moflo gate check-before-scan
- *   npx moflo gate check-before-read
- *   npx moflo gate check-before-agent
- *   npx moflo gate record-task-created
- *   npx moflo gate record-memory-searched
- *   npx moflo gate check-bash-memory
- *   npx moflo gate prompt-reminder
- *   npx moflo gate session-reset
+ *   npx flo gate check-before-scan
+ *   npx flo gate check-before-read
+ *   npx flo gate check-before-agent
+ *   npx flo gate record-task-created
+ *   npx flo gate record-memory-searched
+ *   npx flo gate check-bash-memory
+ *   npx flo gate prompt-reminder
+ *   npx flo gate session-reset
  */
 import { processGateCommand } from '../services/workflow-gate.js';
 const gateCommand = {
@@ -23,15 +23,15 @@ const gateCommand = {
     description: 'Workflow gate enforcement for Claude Code hooks',
     options: [],
     examples: [
-        { command: 'moflo gate check-before-scan', description: 'Check memory-first before Glob/Grep' },
-        { command: 'moflo gate check-before-agent', description: 'Check TaskCreate before Agent tool' },
-        { command: 'moflo gate prompt-reminder', description: 'Reset per-prompt state, show context bracket' },
-        { command: 'moflo gate session-reset', description: 'Reset all workflow state' },
+        { command: 'flo gate check-before-scan', description: 'Check memory-first before Glob/Grep' },
+        { command: 'flo gate check-before-agent', description: 'Check TaskCreate before Agent tool' },
+        { command: 'flo gate prompt-reminder', description: 'Reset per-prompt state, show context bracket' },
+        { command: 'flo gate session-reset', description: 'Reset all workflow state' },
     ],
     action: async (ctx) => {
         const subcommand = ctx.args?.[0];
         if (!subcommand) {
-            console.log('Usage: moflo gate <command>');
+            console.log('Usage: flo gate <command>');
             console.log('');
             console.log('Commands:');
             console.log('  check-before-scan      Check memory searched before Glob/Grep');

package/src/@claude-flow/cli/dist/src/commands/hooks.js

@@ -2790,7 +2790,7 @@ const statuslineCommand = {
             return '[' + '●'.repeat(filled) + '○'.repeat(empty) + ']';
         };
         // Generate lines
-        let header = `${c.bold}${c.brightPurple}▊ RuFlo V3 ${c.reset}`;
+        let header = `${c.bold}${c.brightPurple}▊ MoFlo V4${c.reset}`;
         header += `${swarm.coordinationActive ? c.brightCyan : c.dim}● ${c.brightCyan}${user.name}${c.reset}`;
         if (user.gitBranch) {
             header += `  ${c.dim}│${c.reset}  ${c.brightBlue}⎇ ${user.gitBranch}${c.reset}`;

package/src/@claude-flow/cli/dist/src/commands/init.js

@@ -11,7 +11,7 @@ import { executeInit, executeUpgrade, executeUpgradeWithMissing, DEFAULT_INIT_OP
 async function initCodexAction(ctx, options) {
     const { force, minimal, full, dualMode } = options;
     output.writeln();
-    output.writeln(output.bold('Initializing RuFlo V3 for OpenAI Codex'));
+    output.writeln(output.bold('Initializing MoFlo V4 for OpenAI Codex'));
     output.writeln();
     // Determine template
     const template = minimal ? 'minimal' : full ? 'full' : 'default';
@@ -21,9 +21,11 @@ async function initCodexAction(ctx, options) {
         // Dynamic import of the Codex initializer with lazy loading fallback
         let CodexInitializer;
         // Try multiple resolution strategies for the @claude-flow/codex package
+        // Use a variable to prevent TypeScript from statically resolving the optional module
+        const codexModuleId = '@claude-flow/codex';
         const resolutionStrategies = [
             // Strategy 1: Direct import (works if installed as CLI dependency)
-            async () => (await import('@claude-flow/codex')).CodexInitializer,
+            async () => (await import(codexModuleId)).CodexInitializer,
             // Strategy 2: Project node_modules (works if installed in user's project)
             async () => {
                 const projectPath = path.join(ctx.cwd, 'node_modules', '@claude-flow', 'codex', 'dist', 'index.js');
@@ -180,7 +182,7 @@ const initAction = async (ctx) => {
     const initialized = isInitialized(cwd);
     const hasExisting = initialized.claude || initialized.claudeFlow;
     if (hasExisting && !force) {
-        output.printWarning('RuFlo appears to be already initialized');
+        output.printWarning('MoFlo appears to be already initialized');
         if (initialized.claude)
             output.printInfo('  Found: .claude/settings.json');
         if (initialized.claudeFlow)
@@ -200,7 +202,7 @@ const initAction = async (ctx) => {
         }
     }
     output.writeln();
-    output.writeln(output.bold('Initializing RuFlo V3'));
+    output.writeln(output.bold('Initializing MoFlo V4'));
     output.writeln();
     // Build init options based on flags
     let options;
@@ -240,7 +242,7 @@ const initAction = async (ctx) => {
             }
             return { success: false, exitCode: 1 };
         }
-        spinner.succeed('RuFlo V3 initialized successfully!');
+        spinner.succeed('MoFlo V4 initialized successfully!');
         output.writeln();
         // Display summary
         const summary = [];
@@ -391,7 +393,7 @@ const wizardCommand = {
     description: 'Interactive setup wizard for comprehensive configuration',
     action: async (ctx) => {
         output.writeln();
-        output.writeln(output.bold('RuFlo V3 Setup Wizard'));
+        output.writeln(output.bold('MoFlo V4 Setup Wizard'));
         output.writeln(output.dim('Answer questions to configure your project'));
         output.writeln();
         try {
@@ -625,7 +627,7 @@ const wizardCommand = {
 // Check subcommand
 const checkCommand = {
     name: 'check',
-    description: 'Check if RuFlo is initialized',
+    description: 'Check if MoFlo is initialized',
     action: async (ctx) => {
         const initialized = isInitialized(ctx.cwd);
         const result = {
@@ -642,7 +644,7 @@ const checkCommand = {
             return { success: true, data: result };
         }
         if (result.initialized) {
-            output.printSuccess('RuFlo is initialized');
+            output.printSuccess('MoFlo is initialized');
             if (initialized.claude) {
                 output.printInfo(`  Claude Code: .claude/settings.json`);
             }
@@ -651,8 +653,8 @@ const checkCommand = {
             }
         }
         else {
-            output.printWarning('RuFlo is not initialized in this directory');
-            output.printInfo('Run "ruflo init" to initialize');
+            output.printWarning('MoFlo is not initialized in this directory');
+            output.printInfo('Run "flo init" to initialize');
         }
         return { success: true, data: result };
     },
@@ -795,7 +797,7 @@ const upgradeCommand = {
         const addMissing = (ctx.flags['add-missing'] || ctx.flags.addMissing);
         const upgradeSettings = (ctx.flags.settings);
         output.writeln();
-        output.writeln(output.bold('Upgrading RuFlo'));
+        output.writeln(output.bold('Upgrading MoFlo'));
         if (addMissing && upgradeSettings) {
             output.writeln(output.dim('Updates helpers, settings, and adds any missing skills/agents/commands'));
         }
@@ -895,7 +897,7 @@ const upgradeCommand = {
 // Main init command
 export const initCommand = {
     name: 'init',
-    description: 'Initialize RuFlo in the current directory',
+    description: 'Initialize MoFlo in the current directory',
     subcommands: [wizardCommand, checkCommand, skillsCommand, hooksCommand, upgradeCommand],
     options: [
         {

package/src/@claude-flow/cli/dist/src/commands/neural.js

@@ -1435,7 +1435,7 @@ export const neuralCommand = {
     ],
     action: async () => {
         output.writeln();
-        output.writeln(output.bold('RuFlo Neural System'));
+        output.writeln(output.bold('MoFlo Neural System'));
         output.writeln(output.dim('Advanced AI pattern learning and inference'));
         output.writeln();
         output.writeln('Use --help with subcommands for more info');

package/src/@claude-flow/cli/dist/src/commands/orc.d.ts

@@ -1,15 +1,15 @@
 /**
  * MoFlo Orc Command
- * Feature orchestrator that sequences GitHub issues through /mf workflows.
+ * Feature orchestrator that sequences GitHub issues through /flo workflows.
  *
  * Loads a feature YAML definition, resolves story dependencies via topological
- * sort, then executes each story sequentially by spawning `claude -p "/mf ..."`.
+ * sort, then executes each story sequentially by spawning `claude -p "/flo ..."`.
  *
  * Usage:
- *   moflo orc run <feature.yaml>              Execute a feature
- *   moflo orc run <feature.yaml> --dry-run    Show execution plan
- *   moflo orc status <feature-id>             Check progress
- *   moflo orc reset <feature-id>              Reset for re-run
+ *   flo orc run <feature.yaml>              Execute a feature
+ *   flo orc run <feature.yaml> --dry-run    Show execution plan
+ *   flo orc status <feature-id>             Check progress
+ *   flo orc reset <feature-id>              Reset for re-run
  */
 import type { Command } from '../types.js';
 declare const orcCommand: Command;