mnemosyne-core 2.1.9 → 2.1.11

package/dist/dashboard/index.html

@@ -1534,14 +1534,23 @@
     border-left: 1px solid var(--border-subtle);
     display: flex;
     flex-direction: column;
+    overflow: hidden;
     z-index: 100;
     transition: transform 0.3s cubic-bezier(0.4, 0, 0.2, 1);
   }
   #sidebar-content {
     flex: 1;
     overflow-y: auto;
+    overflow-x: hidden;
     min-height: 0;
-  }
+    max-height: 100%;
+    scrollbar-width: thin;
+    scrollbar-color: rgba(99,116,155,0.35) transparent;
+  }
+  #sidebar-content::-webkit-scrollbar { width: 8px; }
+  #sidebar-content::-webkit-scrollbar-track { background: transparent; }
+  #sidebar-content::-webkit-scrollbar-thumb { background: rgba(99,116,155,0.35); border-radius: 4px; }
+  #sidebar-content::-webkit-scrollbar-thumb:hover { background: rgba(99,116,155,0.5); }
   #sidebar.collapsed {
     transform: translateX(100%);
   }
@@ -5724,23 +5733,24 @@ function updateGraph({ reheat = 0.3, newNodeIds = new Set() } = {}) {
   const viewCenterX = (width / 2 - transform.x) / transform.k;
   const viewCenterY = (height / 2 - transform.y) / transform.k;
 
-  simNodes = nodes.map(n => {
+  // Respect display cap: only sync nodes that are currently rendered
+  const displayNodeIds = new Set(simNodes.map(n => n.id));
+  simNodes = nodes.filter(n => displayNodeIds.has(n.id)).map(n => {
     const old = oldNodeMap.get(n.id);
     if (old) {
       return { ...n, x: old.x, y: old.y, vx: old.vx, vy: old.vy, fx: old.fx, fy: old.fy };
     }
     const saved = savedLayout[n.id];
     if (saved) return { ...n, x: saved.x, y: saved.y, vx: 0, vy: 0 };
-    // NEW NODE — smart positioning near parent or viewport center
-    if (n.parent_id && oldNodeMap.has(n.parent_id)) {
-      const parent = oldNodeMap.get(n.parent_id);
-      return { ...n, x: parent.x + (Math.random() - 0.5) * 100, y: parent.y + (Math.random() - 0.5) * 100, vx: 0, vy: 0 };
-    }
     return { ...n, x: viewCenterX + (Math.random() - 0.5) * 60, y: viewCenterY + (Math.random() - 0.5) * 60, vx: 0, vy: 0 };
   });
 
   const nodeMap = new Map(simNodes.map(n => [n.id, n]));
-  simLinks = links.map(l => {
+  simLinks = links.filter(l => {
+    const s = typeof l.source === "object" ? l.source.id : l.source;
+    const t = typeof l.target === "object" ? l.target.id : l.target;
+    return displayNodeIds.has(s) && displayNodeIds.has(t);
+  }).map(l => {
     const s = typeof l.source === "object" ? l.source.id : l.source;
     const t = typeof l.target === "object" ? l.target.id : l.target;
     const sourceNode = nodeMap.get(s);
@@ -5767,10 +5777,9 @@ function updateGraph({ reheat = 0.3, newNodeIds = new Set() } = {}) {
     .attr("class", d => `link-tree ${d.type === "root" ? "root-link" : "parent"}`)
     .attr("stroke", "#5eead4")
     .attr("stroke-opacity", 0)
-    .attr("stroke-width", d => d.type === "root" ? 1.5 : 2)
-    .attr("filter", "url(#tree-glow)");
+    .attr("stroke-width", d => d.type === "root" ? 2 : 3);
   treeEnter.transition().duration(400)
-    .attr("stroke-opacity", d => d.type === "root" ? 0.5 : 0.85);
+    .attr("stroke-opacity", d => d.type === "root" ? 0.7 : 1);
   linkTreeSel = treeEnter.merge(linkTreeSel);
 
   // Bond links (grouped with handles)
@@ -5991,7 +6000,7 @@ function select(d) {
           if (t === id && !visibleIds.has(s)) { visibleIds.add(s); queue.push(s); }
         });
       }
-      d3.selectAll(".atom-group").transition().duration(300).style("opacity", n => visibleIds.has(n.id) ? 1 : 0.08);
+      d3.selectAll(".atom-group").transition().duration(300).style("opacity", n => visibleIds.has(n.id) ? 1 : 0.35);
       d3.selectAll(".link-tree, .link-bond").transition().duration(300).style("opacity", l => {
         const s = typeof l.source === "object" ? l.source.id : l.source;
         const t = typeof l.target === "object" ? l.target.id : l.target;
@@ -6005,7 +6014,7 @@ function select(d) {
         if (s === d.id) visibleIds.add(t);
         if (t === d.id) visibleIds.add(s);
       });
-      d3.selectAll(".atom-group").transition().duration(300).style("opacity", n => visibleIds.has(n.id) ? 1 : 0.15);
+      d3.selectAll(".atom-group").transition().duration(300).style("opacity", n => visibleIds.has(n.id) ? 1 : 0.5);
       d3.selectAll(".link-tree, .link-bond").transition().duration(300).style("opacity", 1);
     }
   } else if (!currentSearchQuery) {
@@ -6107,6 +6116,7 @@ function bondLinkMouseOut(e, d) {
       return ls === s && lt === t;
     }).transition().duration(150).attr("opacity", 0);
   }
+}
 function bondLinkClick(e, d) {
   e.stopPropagation();
   showBondToolbar(e, d);

package/dist/index.js

@@ -201,7 +201,7 @@ function getVersion() {
       const pkg = JSON.parse(readFileSync6(resolve9(process.cwd(), "package.json"), "utf-8"));
       return pkg.version;
     } catch {
-      return "2.1.9";
+      return "2.1.11";
     }
   }
 }
@@ -5391,7 +5391,7 @@ function getVersion2() {
       const pkg = JSON.parse(readFileSync6(resolve9(process.cwd(), "package.json"), "utf-8"));
       return pkg.version;
     } catch {
-      return "2.1.9";
+      return "2.1.11";
     }
   }
 }
@@ -5978,7 +5978,7 @@ function getVersion3() {
       const pkg = JSON.parse(readFileSync6(resolve9(process.cwd(), "package.json"), "utf-8"));
       return pkg.version;
     } catch {
-      return "2.1.9";
+      return "2.1.11";
     }
   }
 }
@@ -7144,7 +7144,7 @@ var PKG_VERSION = (() => {
     const pkg = JSON.parse(require("fs").readFileSync(require("path").resolve(__dirname, "../../package.json"), "utf-8"));
     return pkg.version;
   } catch {
-    return "2.1.9";
+    return "2.1.11";
   }
 })();
 function handleHealth(store, pathname, method, res) {
@@ -7509,7 +7509,7 @@ var MnemosyneServer = class {
       const wss = new import_websocket_server.default({ server: this.httpServer });
       this.wsHandler = new WebSocketHandler(wss, this.store);
     }
-    const version = cfg?.server?.version || "2.1.9";
+    const version = cfg?.server?.version || "2.1.11";
     this.httpServer.listen(port, () => {
       console.log(`Mnemosyne v${version} \u2014 port ${port}`);
       console.log(`Dashboard: http://${host}:${port}/dashboard`);