mnemosyne-core 2.1.4 → 2.1.6

package/dist/cli/index.mjs

@@ -3641,7 +3641,7 @@ function getVersion() {
       const pkg = JSON.parse(readFileSync8(resolve14(process.cwd(), "package.json"), "utf-8"));
       return pkg.version;
     } catch {
-      return "2.1.4";
+      return "2.1.5";
     }
   }
 }
@@ -7602,7 +7602,7 @@ var require_package = __commonJS({
   "package.json"(exports, module2) {
     module2.exports = {
       name: "mnemosyne-core",
-      version: "2.1.4",
+      version: "2.1.6",
       description: "Unified memory engine for AI agents \u2014 graph atoms, semantic search, and collaborative memory",
       logo: "logo.png",
       author: "Arman Aslanyan <aslanyanarman88@gmail.com> (https://www.linkedin.com/in/arman-aslanyan/)",
@@ -8140,7 +8140,15 @@ var Store = class extends EventEmitter {
     vals.push(this.now());
     sets.push("version = version + 1");
     vals.push(id);
-    this.stmt(`UPDATE atoms SET ${sets.join(", ")} WHERE id = ?`).run(...vals);
+    const sql = `UPDATE atoms SET ${sets.join(", ")} WHERE id = ?`;
+    try {
+      this.stmt(sql).run(...vals);
+    } catch (err) {
+      if (err.message?.includes("malformed") || err.message?.includes("corrupt")) {
+        throw new Error(`Database appears corrupted. Run "mnemosyne doctor --data-dir ./data" or delete the data directory and run "mnemosyne init" again.`);
+      }
+      throw err;
+    }
     const updated = this.getAtom(id);
     this.emit("atom.updated", { atom: updated, projectId: atom.project_id, changes });
     this.logEvent("atom.updated", updatedBy, "assistant", atom.project_id, id, void 0, { fields: changes });
@@ -8395,7 +8403,6 @@ var Store = class extends EventEmitter {
   // ═══════════════════════════════════════════════════════════
   search(projectId, q, limit) {
     const results = [];
-    const seenAtoms = /* @__PURE__ */ new Set();
     const matchExpr = q.trim().split(/\s+/).filter(Boolean).map((t) => `"${t.replace(/"/g, "")}"`).join(" ");
     if (!matchExpr) return results;
     const projectFilter = projectId ? "AND a.project_id = ?" : "";
@@ -8410,26 +8417,9 @@ var Store = class extends EventEmitter {
     `).all(...paramsAtoms);
     for (const a of atoms) {
       if (results.length >= limit) break;
-      seenAtoms.add(a.id);
+      if (a.title === "__INDEX__") continue;
       results.push({ kind: "atom", ...a, metadata: this.parseMeta(a) });
     }
-    const paramsBlocks = projectId ? [matchExpr, projectId, limit] : [matchExpr, limit];
-    const blocks = this.stmt(`
-      SELECT b.*, a.title as atom_title, a.id as atom_id, bm25(search_blocks) as rank
-      FROM search_blocks
-      JOIN blocks b ON b.rowid = search_blocks.rowid
-      JOIN atoms a ON b.atom_id = a.id
-      WHERE search_blocks MATCH ? ${projectFilter}
-      ORDER BY rank
-      LIMIT ?
-    `).all(...paramsBlocks);
-    for (const b of blocks) {
-      if (results.length >= limit) break;
-      if (!seenAtoms.has(b.atom_id)) {
-        seenAtoms.add(b.atom_id);
-        results.push({ kind: "block", ...b, metadata: this.parseMeta(b) });
-      }
-    }
     return results;
   }
   // ─── Semantic Search ──────────────────────────────────────
@@ -8480,7 +8470,7 @@ var Store = class extends EventEmitter {
         ORDER BY v.distance
         LIMIT ${limit}
       `).all(...params);
-      return rows.map((r) => ({ kind: "atom", ...r, metadata: this.parseMeta(r) }));
+      return rows.filter((r) => r.title !== "__INDEX__").map((r) => ({ kind: "atom", ...r, metadata: this.parseMeta(r) }));
     } catch (err) {
       console.error("[Store] Semantic search failed:", err.message);
       return [];
@@ -8943,7 +8933,7 @@ function getVersion2() {
       const pkg = JSON.parse(readFileSync8(resolve14(process.cwd(), "package.json"), "utf-8"));
       return pkg.version;
     } catch {
-      return "2.1.4";
+      return "2.1.5";
     }
   }
 }
@@ -9182,7 +9172,7 @@ CREATE TRIGGER IF NOT EXISTS trig_search_atoms_insert AFTER INSERT ON atoms BEGI
 END;
 
 CREATE TRIGGER IF NOT EXISTS trig_search_atoms_update AFTER UPDATE ON atoms BEGIN
-    UPDATE search_atoms SET title = new.title, summary = COALESCE(new.summary, '') WHERE rowid = new.rowid;
+    INSERT OR REPLACE INTO search_atoms(rowid, title, summary) VALUES (new.rowid, new.title, COALESCE(new.summary, ''));
 END;
 
 CREATE TRIGGER IF NOT EXISTS trig_search_atoms_delete AFTER DELETE ON atoms BEGIN
@@ -9234,6 +9224,10 @@ var Mnemosyne = class {
     this.db.pragma("journal_mode = WAL");
     this.db.pragma("foreign_keys = ON");
     this.db.pragma("synchronous = NORMAL");
+    try {
+      this.db.pragma("wal_checkpoint(TRUNCATE)");
+    } catch {
+    }
     this.vecEnabled = false;
     try {
       let vecPath;
@@ -9541,7 +9535,7 @@ function getVersion3() {
       const pkg = JSON.parse(readFileSync8(resolve14(process.cwd(), "package.json"), "utf-8"));
       return pkg.version;
     } catch {
-      return "2.1.4";
+      return "2.1.5";
     }
   }
 }
@@ -10466,8 +10460,7 @@ async function handleSearch(store, pathname, method, res, searchParams) {
     } else {
       results = store.search(projectId, q, limit);
     }
-    const filtered = results.filter((r) => r.title !== "__INDEX__");
-    json(res, 200, { query: q, semantic, count: filtered.length, results: filtered });
+    json(res, 200, { query: q, semantic, count: results.length, results });
     return true;
   }
   return false;
@@ -10677,7 +10670,7 @@ var PKG_VERSION = (() => {
     const pkg = JSON.parse(__require("fs").readFileSync(__require("path").resolve(__dirname, "../../package.json"), "utf-8"));
     return pkg.version;
   } catch {
-    return "2.1.4";
+    return "2.1.5";
   }
 })();
 function handleHealth(store, pathname, method, res) {
@@ -10923,6 +10916,10 @@ function getDb() {
     db.pragma("journal_mode = WAL");
     db.pragma("foreign_keys = ON");
     db.pragma("synchronous = NORMAL");
+    try {
+      db.pragma("wal_checkpoint(TRUNCATE)");
+    } catch {
+    }
     try {
       const { getLoadablePath } = __require("sqlite-vec");
       db.loadExtension(getLoadablePath());
@@ -11001,7 +10998,7 @@ var MnemosyneServer = class {
       const wss = new import_websocket_server.default({ server: this.httpServer });
       this.wsHandler = new WebSocketHandler(wss, this.store);
     }
-    const version = cfg?.server?.version || "2.1.4";
+    const version = cfg?.server?.version || "2.1.5";
     this.httpServer.listen(port, () => {
       console.log(`Mnemosyne v${version} \u2014 port ${port}`);
       console.log(`Dashboard: http://${host}:${port}/dashboard`);
@@ -11059,7 +11056,7 @@ function getVersion4() {
     const { resolve: resolve14 } = __require("path");
     return JSON.parse(readFileSync8(resolve14(__dirname, "../../package.json"), "utf-8")).version;
   } catch {
-    return "2.1.4";
+    return "2.1.5";
   }
 }
 async function startCommand(options) {
@@ -11351,7 +11348,7 @@ program2.name("mnemosyne").description("Mnemosyne \u2014 Your exocortex").versio
   try {
     return require_package().version;
   } catch {
-    return "2.1.4";
+    return "2.1.5";
   }
 })());
 program2.command("init").description("Initialize a new Mnemosyne workspace").option("-d, --data-dir <path>", "Data directory", "./data").option("-c, --config <path>", "Config file path").action(initCommand);