mne-docs-mcp 1.0.48 → 1.0.49

package/dist/tools/listMneVersions.d.ts

@@ -1,73 +1,16 @@
 import { z } from 'zod';
 import { MneVersion, RateLimitSummary, ToolContext } from '../types.js';
 export declare const definition: {
-    name: string;
-    title: string;
-    description: string;
     inputSchema: {
         limit: z.ZodOptional<z.ZodNumber>;
-        stableOnly: z.ZodOptional<z.ZodBoolean>;
+        stableOnly: z.ZodDefault<z.ZodOptional<z.ZodBoolean>>;
         package: z.ZodOptional<z.ZodEnum<[string, ...string[]]>>;
     };
-    annotations: {
-        readonly readOnlyHint: true;
-        readonly destructiveHint: false;
-        readonly idempotentHint: true;
-        readonly openWorldHint: true;
-    };
-    outputSchema: z.ZodObject<{
-        versions: z.ZodArray<z.ZodObject<{
-            version: z.ZodString;
-            tag: z.ZodString;
-            isLatest: z.ZodBoolean;
-        }, "strip", z.ZodTypeAny, {
-            version: string;
-            isLatest: boolean;
-            tag: string;
-        }, {
-            version: string;
-            isLatest: boolean;
-            tag: string;
-        }>, "many">;
-        package: z.ZodString;
-        rateLimit: z.ZodOptional<z.ZodObject<{
-            remaining: z.ZodNumber;
-            limit: z.ZodNumber;
-            resetInSeconds: z.ZodNumber;
-        }, "strip", z.ZodTypeAny, {
-            remaining: number;
-            limit: number;
-            resetInSeconds: number;
-        }, {
-            remaining: number;
-            limit: number;
-            resetInSeconds: number;
-        }>>;
-    }, "strip", z.ZodTypeAny, {
-        package: string;
-        versions: {
-            version: string;
-            isLatest: boolean;
-            tag: string;
-        }[];
-        rateLimit?: {
-            remaining: number;
-            limit: number;
-            resetInSeconds: number;
-        } | undefined;
-    }, {
-        package: string;
-        versions: {
-            version: string;
-            isLatest: boolean;
-            tag: string;
-        }[];
-        rateLimit?: {
-            remaining: number;
-            limit: number;
-            resetInSeconds: number;
-        } | undefined;
-    }>;
+    name: string;
+    title: string;
+    description: string;
+    annotations?: object;
+    outputSchema?: z.ZodTypeAny;
 };
 export interface ListMneVersionsResult {
     versions: MneVersion[];

package/dist/tools/listMneVersions.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"listMneVersions.d.ts","sourceRoot":"","sources":["../../src/tools/listMneVersions.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAAE,UAAU,EAAE,gBAAgB,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAUxE,eAAO,MAAM,UAAU;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CAetB,CAAC;AAEF,MAAM,WAAW,qBAAqB;IAClC,QAAQ,EAAE,UAAU,EAAE,CAAC;IACvB,OAAO,EAAE,MAAM,CAAC;IAChB,SAAS,CAAC,EAAE,gBAAgB,CAAC;CAChC;AAQD,wBAAsB,eAAe,CACjC,MAAM,EAAE,OAAO,EACf,OAAO,EAAE,WAAW,GACrB,OAAO,CAAC,qBAAqB,CAAC,CAiChC;AAED,OAAO,EAAE,eAAe,IAAI,OAAO,EAAE,CAAC"}
+{"version":3,"file":"listMneVersions.d.ts","sourceRoot":"","sources":["../../src/tools/listMneVersions.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAAE,UAAU,EAAE,gBAAgB,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAWxE,eAAO,MAAM,UAAU;;;;;;;;;;;CAWrB,CAAC;AAEH,MAAM,WAAW,qBAAqB;IAClC,QAAQ,EAAE,UAAU,EAAE,CAAC;IACvB,OAAO,EAAE,MAAM,CAAC;IAChB,SAAS,CAAC,EAAE,gBAAgB,CAAC;CAChC;AAQD,wBAAsB,eAAe,CACjC,MAAM,EAAE,OAAO,EACf,OAAO,EAAE,WAAW,GACrB,OAAO,CAAC,qBAAqB,CAAC,CAkChC;AAED,OAAO,EAAE,eAAe,IAAI,OAAO,EAAE,CAAC"}

package/dist/tools/listMneVersions.js

@@ -1,27 +1,24 @@
 import { z } from 'zod';
-import { MNE_PACKAGE_NAMES, packageSchema } from '../config.js';
+import { DEFAULT_PACKAGE, packageSchema } from '../config.js';
 import { READ_ONLY_TOOL_ANNOTATIONS } from './annotations.js';
+import { defineTool } from './defineTool.js';
 const ListMneVersionsParamsSchema = z.object({
-    limit: z.number().int().min(1).max(100).optional(),
-    stableOnly: z.boolean().optional().default(false),
-    package: z.enum(MNE_PACKAGE_NAMES).optional(),
+    limit: z.number().int().min(1).max(100).optional().describe('Max versions to return (default: 20)'),
+    stableOnly: z.boolean().optional().default(false).describe('Only return stable releases, excluding alpha/beta/rc/dev tags (default: false)'),
+    package: packageSchema,
 });
-export const definition = {
+export const definition = defineTool({
     name: 'list_mne_versions',
     title: 'List MNE Versions',
     description: 'List available release versions for MNE-Python or related packages (mne-bids, mne-connectivity, etc.). Use to find valid version numbers before querying docs or code.',
-    inputSchema: {
-        limit: z.number().int().min(1).max(100).optional().describe('Max versions to return (default: 20)'),
-        stableOnly: z.boolean().optional().describe('Only return stable releases, excluding alpha/beta/rc/dev tags (default: false)'),
-        package: packageSchema,
-    },
+    paramsSchema: ListMneVersionsParamsSchema,
     annotations: READ_ONLY_TOOL_ANNOTATIONS,
     outputSchema: z.object({
         versions: z.array(z.object({ version: z.string(), tag: z.string(), isLatest: z.boolean() })),
         package: z.string(),
-        rateLimit: z.object({ remaining: z.number(), limit: z.number(), resetInSeconds: z.number() }).optional(),
+        rateLimit: z.object({ remaining: z.number(), limit: z.number(), resetInSeconds: z.number(), bucket: z.string().optional() }).optional(),
     }),
-};
+});
 /** Returns true for semver tags that look like stable releases (no pre-release suffix). */
 function isStableVersion(version) {
     // Exclude tags with alpha/beta/rc/dev suffixes, e.g. "1.0.0a1", "0.24.0rc1", "0.18.dev0"
@@ -29,17 +26,17 @@ function isStableVersion(version) {
 }
 export async function listMneVersions(params, context) {
     const { limit = 20, stableOnly, package: packageName } = ListMneVersionsParamsSchema.parse(params);
-    const pkg = packageName || 'mne-python';
+    const pkg = packageName || context.repoContent.getDefaultPackageName?.() || DEFAULT_PACKAGE;
     // Check cache first (unfiltered lists only)
     if (!stableOnly) {
         const cachedVersions = context.cache.getVersions(pkg);
-        if (cachedVersions) {
+        if (cachedVersions && cachedVersions.length >= limit) {
             return { versions: cachedVersions.slice(0, limit), package: pkg };
         }
     }
     // Fetch from GitHub — fetch extra entries when filtering so we can still fill `limit`
     const fetchCount = stableOnly ? Math.min(limit * 3, 100) : limit;
-    const versions = await context.github.fetchVersions(fetchCount, packageName);
+    const versions = await context.github.fetchVersions(fetchCount, pkg);
     // Filter to stable releases if requested
     const filtered = stableOnly ? versions.filter(v => isStableVersion(v.version)) : versions;
     // Update cache (unfiltered lists only)
@@ -52,6 +49,7 @@ export async function listMneVersions(params, context) {
         remaining: rateLimitInfo.remaining,
         limit: rateLimitInfo.limit,
         resetInSeconds: rateLimitInfo.resetInSeconds,
+        bucket: 'core',
     } : undefined;
     return { versions: filtered.slice(0, limit), package: pkg, rateLimit };
 }

package/dist/tools/listMneVersions.js.map

@@ -1 +1 @@
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+{"version":3,"file":"listMneVersions.js","sourceRoot":"","sources":["../../src/tools/listMneVersions.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,eAAe,EAAE,aAAa,EAAE,MAAM,cAAc,CAAC;AAC9D,OAAO,EAAE,0BAA0B,EAAE,MAAM,kBAAkB,CAAC;AAC9D,OAAO,EAAE,UAAU,EAAE,MAAM,iBAAiB,CAAC;AAE7C,MAAM,2BAA2B,GAAG,CAAC,CAAC,MAAM,CAAC;IACzC,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,sCAAsC,CAAC;IACnG,UAAU,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,QAAQ,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,QAAQ,CAAC,gFAAgF,CAAC;IAC5I,OAAO,EAAE,aAAa;CACzB,CAAC,CAAC;AAEH,MAAM,CAAC,MAAM,UAAU,GAAG,UAAU,CAAC;IACjC,IAAI,EAAE,mBAAmB;IACzB,KAAK,EAAE,mBAAmB;IAC1B,WAAW,EAAE,wKAAwK;IACrL,YAAY,EAAE,2BAA2B;IACzC,WAAW,EAAE,0BAA0B;IACvC,YAAY,EAAE,CAAC,CAAC,MAAM,CAAC;QACnB,QAAQ,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,MAAM,EAAE,EAAE,GAAG,EAAE,CAAC,CAAC,MAAM,EAAE,EAAE,QAAQ,EAAE,CAAC,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC;QAC5F,OAAO,EAAE,CAAC,CAAC,MAAM,EAAE;QACnB,SAAS,EAAE,CAAC,CAAC,MAAM,CAAC,EAAE,SAAS,EAAE,CAAC,CAAC,MAAM,EAAE,EAAE,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,EAAE,cAAc,EAAE,CAAC,CAAC,MAAM,EAAE,EAAE,MAAM,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,EAAE,CAAC,CAAC,QAAQ,EAAE;KAC1I,CAAC;CACL,CAAC,CAAC;AAQH,2FAA2F;AAC3F,SAAS,eAAe,CAAC,OAAe;IACpC,yFAAyF;IACzF,OAAO,oBAAoB,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;AAC9C,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,eAAe,CACjC,MAAe,EACf,OAAoB;IAEpB,MAAM,EAAE,KAAK,GAAG,EAAE,EAAE,UAAU,EAAE,OAAO,EAAE,WAAW,EAAE,GAAG,2BAA2B,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;IACnG,MAAM,GAAG,GAAG,WAAW,IAAI,OAAO,CAAC,WAAW,CAAC,qBAAqB,EAAE,EAAE,IAAI,eAAe,CAAC;IAE5F,4CAA4C;IAC5C,IAAI,CAAC,UAAU,EAAE,CAAC;QACd,MAAM,cAAc,GAAG,OAAO,CAAC,KAAK,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC;QACtD,IAAI,cAAc,IAAI,cAAc,CAAC,MAAM,IAAI,KAAK,EAAE,CAAC;YACnD,OAAO,EAAE,QAAQ,EAAE,cAAc,CAAC,KAAK,CAAC,CAAC,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,GAAG,EAAE,CAAC;QACtE,CAAC;IACL,CAAC;IAED,sFAAsF;IACtF,MAAM,UAAU,GAAG,UAAU,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,EAAE,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;IACjE,MAAM,QAAQ,GAAG,MAAM,OAAO,CAAC,MAAM,CAAC,aAAa,CAAC,UAAU,EAAE,GAAG,CAAC,CAAC;IAErE,yCAAyC;IACzC,MAAM,QAAQ,GAAG,UAAU,CAAC,CAAC,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,eAAe,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC;IAE1F,uCAAuC;IACvC,IAAI,CAAC,UAAU,EAAE,CAAC;QACd,OAAO,CAAC,KAAK,CAAC,WAAW,CAAC,QAAQ,EAAE,GAAG,CAAC,CAAC;IAC7C,CAAC;IAED,0BAA0B;IAC1B,MAAM,aAAa,GAAG,OAAO,CAAC,MAAM,CAAC,gBAAgB,EAAE,CAAC;IACxD,MAAM,SAAS,GAAG,aAAa,CAAC,CAAC,CAAC;QAC9B,SAAS,EAAE,aAAa,CAAC,SAAS;QAClC,KAAK,EAAE,aAAa,CAAC,KAAK;QAC1B,cAAc,EAAE,aAAa,CAAC,cAAc;QAC5C,MAAM,EAAE,MAAM;KACjB,CAAC,CAAC,CAAC,SAAS,CAAC;IAEd,OAAO,EAAE,QAAQ,EAAE,QAAQ,CAAC,KAAK,CAAC,CAAC,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,GAAG,EAAE,SAAS,EAAE,CAAC;AAC3E,CAAC;AAED,OAAO,EAAE,eAAe,IAAI,OAAO,EAAE,CAAC"}

package/dist/tools/lookupMneError.d.ts

@@ -1,20 +1,16 @@
 import { z } from 'zod';
 import { ToolContext } from '../types.js';
 export declare const definition: {
-    name: string;
-    title: string;
-    description: string;
     inputSchema: {
         errorMessage: z.ZodString;
         context: z.ZodOptional<z.ZodString>;
-        brief: z.ZodOptional<z.ZodBoolean>;
-    };
-    annotations: {
-        readonly readOnlyHint: true;
-        readonly destructiveHint: false;
-        readonly idempotentHint: true;
-        readonly openWorldHint: true;
+        brief: z.ZodDefault<z.ZodOptional<z.ZodBoolean>>;
     };
+    name: string;
+    title: string;
+    description: string;
+    annotations?: object;
+    outputSchema?: z.ZodTypeAny;
 };
 /**
  * A suggested solution for an error.
@@ -22,6 +18,7 @@ export declare const definition: {
 interface Solution {
     description: string;
     codeExample?: string;
+    confidence?: 'high' | 'medium' | 'low';
 }
 /**
  * Brief solution (no code examples).
@@ -50,22 +47,29 @@ interface RelatedForumPost {
  */
 export interface ErrorLookupResult {
     errorType: string;
+    confidence: 'high' | 'medium' | 'low';
     commonCauses: string[];
     solutions: Solution[];
     relatedIssues: RelatedIssue[];
     relatedForumPosts: RelatedForumPost[];
     documentationLinks: string[];
+    nextTools: string[];
+    partial?: boolean;
+    partialReasons?: string[];
 }
 /**
  * Brief result of error lookup (reduced tokens).
  */
 export interface ErrorLookupBriefResult {
     errorType: string;
+    confidence: 'high' | 'medium' | 'low';
     commonCauses: string[];
     solutions: BriefSolution[];
     issueCount: number;
     forumPostCount: number;
     hint: string;
+    partial?: boolean;
+    partialReasons?: string[];
 }
 /**
  * Looks up common MNE errors and provides solutions.

package/dist/tools/lookupMneError.d.ts.map

@@ -1 +1 @@
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package/dist/tools/lookupMneError.js

@@ -1,23 +1,20 @@
 import { z } from 'zod';
 import { getLogger } from '../utils/logger.js';
 import { READ_ONLY_TOOL_ANNOTATIONS } from './annotations.js';
+import { defineTool } from './defineTool.js';
 const logger = getLogger();
 const LookupMneErrorParamsSchema = z.object({
-    errorMessage: z.string().trim().min(1, 'Error message is required'),
-    context: z.string().optional(),
-    brief: z.boolean().optional().default(false),
+    errorMessage: z.string().trim().min(1, 'Error message is required').describe('The error message or traceback, e.g. "ValueError: No events found"'),
+    context: z.string().optional().describe('Code that caused the error (helps find better solutions)'),
+    brief: z.boolean().optional().default(false).describe('Return only descriptions, no code examples (default: false)'),
 });
-export const definition = {
+export const definition = defineTool({
     name: 'lookup_mne_error',
     title: 'Lookup MNE Error',
     description: 'Diagnose MNE error messages and get solutions. Searches known issues, forum posts, and provides common fixes. Use when users paste an error traceback or ask why something failed.',
-    inputSchema: {
-        errorMessage: z.string().describe('The error message or traceback, e.g. "ValueError: No events found"'),
-        context: z.string().optional().describe('Code that caused the error (helps find better solutions)'),
-        brief: z.boolean().optional().describe('Return only descriptions, no code examples (default: false)'),
-    },
+    paramsSchema: LookupMneErrorParamsSchema,
     annotations: READ_ONLY_TOOL_ANNOTATIONS,
-};
+});
 /**
  * Looks up common MNE errors and provides solutions.
  * Searches GitHub issues and forum for related discussions.
@@ -26,7 +23,7 @@ export async function lookupMneError(params, context) {
     const { errorMessage, context: codeContext, brief } = LookupMneErrorParamsSchema.parse(params);
     logger.debug(`Looking up error: ${errorMessage.slice(0, 100)}`);
     // Extract error type from message
-    const errorType = extractErrorType(errorMessage);
+    const { errorType, confidence } = classifyError(errorMessage);
     // Build a targeted search query: prefer the specific error phrase over just the type.
     // Use key phrases from the message (strip traceback boilerplate first).
     const cleanMsg = errorMessage
@@ -37,11 +34,18 @@ export async function lookupMneError(params, context) {
     const issueQuery = cleanMsg.length > 20
         ? `"${cleanMsg.slice(0, 60)}"`
         : `"${errorType}"`;
-    // Search GitHub issues for this error (in parallel)
-    const [issues, forumResults] = await Promise.all([
+    // Search GitHub issues and forum in parallel, but keep local heuristic
+    // diagnosis useful if either external source is unavailable.
+    const [issuesSettled, forumSettled] = await Promise.allSettled([
         context.github.searchIssues(issueQuery, { perPage: 5 }),
         context.forum.search(cleanMsg.slice(0, 100), 5),
     ]);
+    const issues = issuesSettled.status === 'fulfilled' ? issuesSettled.value : [];
+    const forumResults = forumSettled.status === 'fulfilled' ? forumSettled.value : [];
+    const partialReasons = [
+        ...(issuesSettled.status === 'rejected' ? [`GitHub issue search failed: ${describeError(issuesSettled.reason)}`] : []),
+        ...(forumSettled.status === 'rejected' ? [`Forum search failed: ${describeError(forumSettled.reason)}`] : []),
+    ];
     // Build common causes based on error type and message
     const commonCauses = getCommonCauses(errorType, errorMessage);
     const solutions = getSolutions(errorType, errorMessage, codeContext);
@@ -49,15 +53,18 @@ export async function lookupMneError(params, context) {
     if (brief) {
         return {
             errorType,
+            confidence,
             commonCauses: commonCauses.slice(0, 3),
             solutions: solutions.map(s => ({ description: s.description })),
             issueCount: issues.length,
             forumPostCount: forumResults.length,
             hint: 'Use lookup_mne_error(errorMessage, brief=false) for code examples and links',
+            ...(partialReasons.length > 0 && { partial: true, partialReasons }),
         };
     }
     return {
         errorType,
+        confidence,
         commonCauses,
         solutions,
         relatedIssues: issues.map((i) => ({
@@ -71,8 +78,13 @@ export async function lookupMneError(params, context) {
             url: f.url,
         })),
         documentationLinks: getDocLinks(errorType, errorMessage),
+        nextTools: getNextTools(errorMessage),
+        ...(partialReasons.length > 0 && { partial: true, partialReasons }),
     };
 }
+function describeError(error) {
+    return error instanceof Error ? error.message : String(error);
+}
 /**
  * Extract error type from message.
  */
@@ -91,6 +103,26 @@ function extractErrorType(message) {
         return anyMatch[1];
     return 'Unknown';
 }
+function classifyError(message) {
+    const extracted = extractErrorType(message);
+    if (extracted !== 'Unknown') {
+        return { errorType: extracted, confidence: 'high' };
+    }
+    const lower = message.toLowerCase();
+    if (lower.includes('nyquist') || (lower.includes('filter') && lower.includes('frequency'))) {
+        return { errorType: 'ValueError', confidence: 'high' };
+    }
+    if (lower.includes('no events found')) {
+        return { errorType: 'ValueError', confidence: 'high' };
+    }
+    if (lower.includes('montage') || lower.includes('channel position') || lower.includes('digitization')) {
+        return { errorType: 'RuntimeError', confidence: 'medium' };
+    }
+    if (lower.includes('preload') || lower.includes('data not loaded')) {
+        return { errorType: 'RuntimeError', confidence: 'medium' };
+    }
+    return { errorType: 'Unknown', confidence: 'low' };
+}
 /**
  * Get common causes for specific error types.
  */
@@ -171,6 +203,7 @@ function getSolutions(errorType, message, codeContext) {
     if (lower.includes('no events found')) {
         solutions.push({
             description: 'The events array is empty. Check your event detection parameters.',
+            confidence: 'high',
             codeExample: `# Check available events in your data
 events = mne.find_events(raw, stim_channel='STI 014')
 print(f"Found {len(events)} events")
@@ -187,6 +220,7 @@ print(raw.info['ch_names'])  # Look for STI/STIM channels`,
     if (lower.includes('baseline period')) {
         solutions.push({
             description: 'Baseline period extends beyond epoch boundaries.',
+            confidence: 'high',
             codeExample: `# Ensure baseline is within tmin/tmax
 epochs = mne.Epochs(raw, events, 
                     tmin=-0.2, tmax=0.5,
@@ -199,6 +233,7 @@ epochs = mne.Epochs(raw, events, tmin=-0.2, tmax=0.5, baseline=None)`,
     if (lower.includes('data not loaded') || lower.includes('preload')) {
         solutions.push({
             description: 'Data needs to be loaded into memory before this operation; call raw.load_data() first or read with preload=True.',
+            confidence: 'high',
             codeExample: `# Load data into memory
 raw.load_data()
 
@@ -211,6 +246,7 @@ raw = mne.io.read_raw_fif('file.fif', preload=True)`,
     if (!isPositionError && lower.includes('channel') && (lower.includes('not found') || lower.includes('missing'))) {
         solutions.push({
             description: 'The specified channel was not found in the data.',
+            confidence: 'medium',
             codeExample: `# List available channels
 print(raw.ch_names)
 
@@ -224,6 +260,7 @@ raw.pick_channels(['EEG 001', 'EEG 002'])`,
     if (lower.includes('channel position') || lower.includes('montage') || lower.includes('digitization')) {
         solutions.push({
             description: 'Channel positions are missing. Apply a montage before operations that need sensor locations.',
+            confidence: 'high',
             codeExample: `# Apply a standard montage
 montage = mne.channels.make_standard_montage('standard_1020')
 raw.set_montage(montage)
@@ -236,9 +273,11 @@ montage = mne.channels.read_custom_montage('my_montage.sfp')
 raw.set_montage(montage)`,
         });
     }
-    if (lower.includes('filter') && (lower.includes('nyquist') || lower.includes('frequency'))) {
+    if (lower.includes('nyquist') || lower.includes('h_freq') || lower.includes('l_freq') ||
+        (lower.includes('filter') && lower.includes('frequency'))) {
         solutions.push({
             description: 'Filter frequency exceeds Nyquist frequency (half the sampling rate).',
+            confidence: 'high',
             codeExample: `# Check sampling rate
 print(f"Sampling rate: {raw.info['sfreq']} Hz")
 print(f"Nyquist frequency: {raw.info['sfreq'] / 2} Hz")
@@ -251,6 +290,7 @@ raw.filter(l_freq=1, h_freq=40)`,
     if (lower.includes('memory') || lower.includes('memoryerror')) {
         solutions.push({
             description: 'Not enough memory for the operation.',
+            confidence: 'medium',
             codeExample: `# Use preload=False to reduce memory
 raw = mne.io.read_raw_fif('file.fif', preload=False)
 
@@ -266,6 +306,7 @@ for start in range(0, len(raw.times), chunk_size):
     if (lower.includes('ica') && lower.includes('fit')) {
         solutions.push({
             description: 'ICA fitting issue - check data quality and parameters.',
+            confidence: 'medium',
             codeExample: `# Ensure data is filtered before ICA
 raw.filter(l_freq=1, h_freq=None)
 
@@ -281,6 +322,7 @@ ica.fit(raw)`,
         if (lowerContext.includes('epochs') && lower.includes('baseline')) {
             solutions.unshift({
                 description: 'Baseline error in Epochs - check tmin/tmax and baseline parameters match.',
+                confidence: 'high',
                 codeExample: `# Ensure baseline period is within epoch bounds
 # If tmin=-0.2, tmax=0.5, baseline must be within that range
 epochs = mne.Epochs(raw, events, tmin=-0.2, tmax=0.5, baseline=(-0.2, 0))`,
@@ -289,6 +331,7 @@ epochs = mne.Epochs(raw, events, tmin=-0.2, tmax=0.5, baseline=(-0.2, 0))`,
         if (lowerContext.includes('raw') && lower.includes('preload')) {
             solutions.unshift({
                 description: 'Raw data needs to be loaded before this operation.',
+                confidence: 'high',
                 codeExample: `# Load data into memory first
 raw.load_data()
 # Then perform your operation`,
@@ -299,10 +342,22 @@ raw.load_data()
     if (solutions.length === 0) {
         solutions.push({
             description: `Check the MNE documentation for ${errorType} handling.`,
+            confidence: 'low',
         });
     }
     return solutions;
 }
+function getNextTools(message) {
+    const lower = message.toLowerCase();
+    const tools = ['search_mne_docs', 'search_mne_forum'];
+    if (lower.includes('attribute') || lower.includes('method') || lower.includes('api')) {
+        tools.unshift('get_mne_doc');
+    }
+    else if (lower.includes('event') || lower.includes('filter') || lower.includes('montage')) {
+        tools.unshift('get_mne_doc');
+    }
+    return Array.from(new Set(tools));
+}
 /**
  * Get relevant documentation links.
  */

package/dist/tools/lookupMneError.js.map

@@ -1 +1 @@
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package/dist/tools/requestBudget.d.ts

@@ -0,0 +1,12 @@
+import { RequestBudgetSummary } from '../types.js';
+type GithubRateLimitBucket = 'core' | 'search' | 'code';
+interface GithubRateLimitLike {
+    getRateLimitInfo?: (bucket?: GithubRateLimitBucket) => {
+        remaining: number;
+        limit: number;
+        resetInSeconds: number;
+    } | null;
+}
+export declare function buildGithubRequestBudget(github: GithubRateLimitLike, buckets: GithubRateLimitBucket[]): RequestBudgetSummary | undefined;
+export {};
+//# sourceMappingURL=requestBudget.d.ts.map

package/dist/tools/requestBudget.d.ts.map

@@ -0,0 +1 @@
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package/dist/tools/requestBudget.js

@@ -0,0 +1,36 @@
+export function buildGithubRequestBudget(github, buckets) {
+    if (typeof github.getRateLimitInfo !== 'function')
+        return undefined;
+    const summaries = Array.from(new Set(buckets))
+        .map(bucket => {
+        const info = github.getRateLimitInfo?.(bucket);
+        if (!info)
+            return null;
+        return {
+            bucket,
+            remaining: info.remaining,
+            limit: info.limit,
+            resetInSeconds: info.resetInSeconds,
+        };
+    })
+        .filter((item) => item !== null);
+    if (summaries.length === 0)
+        return undefined;
+    const warnings = summaries.flatMap(summary => {
+        if (summary.remaining <= 0) {
+            return [`GitHub ${summary.bucket} request budget is exhausted.`];
+        }
+        if (summary.bucket === 'code' && summary.remaining <= 2) {
+            return [`GitHub code-search budget is low (${summary.remaining}/${summary.limit} remaining).`];
+        }
+        if (summary.limit > 0 && summary.remaining / summary.limit <= 0.1) {
+            return [`GitHub ${summary.bucket} request budget is low (${summary.remaining}/${summary.limit} remaining).`];
+        }
+        return [];
+    });
+    return {
+        buckets: summaries,
+        warnings,
+    };
+}
+//# sourceMappingURL=requestBudget.js.map

package/dist/tools/requestBudget.js.map

@@ -0,0 +1 @@
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package/dist/tools/searchMneDocs.d.ts

@@ -1,21 +1,17 @@
 import { z } from 'zod';
 import { SearchResult, ToolContext } from '../types.js';
 export declare const definition: {
-    name: string;
-    title: string;
-    description: string;
     inputSchema: {
         query: z.ZodString;
         version: z.ZodOptional<z.ZodString>;
         maxResultsPerSource: z.ZodOptional<z.ZodNumber>;
         package: z.ZodOptional<z.ZodEnum<[string, ...string[]]>>;
     };
-    annotations: {
-        readonly readOnlyHint: true;
-        readonly destructiveHint: false;
-        readonly idempotentHint: true;
-        readonly openWorldHint: true;
-    };
+    name: string;
+    title: string;
+    description: string;
+    annotations?: object;
+    outputSchema?: z.ZodTypeAny;
 };
 export declare function searchMneDocs(params: unknown, context: ToolContext): Promise<SearchResult>;
 export { searchMneDocs as handler };

package/dist/tools/searchMneDocs.d.ts.map

@@ -1 +1 @@
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