mne-docs-mcp 1.0.26 → 1.0.27

package/dist/github/client.d.ts

@@ -10,7 +10,13 @@ export declare class GitHubClient {
     private inFlight;
     private codeQueue;
     private lastCodeSearchAt;
+    private searchTtlMs;
+    private codeSearchCache;
+    private issueSearchCache;
+    private static readonly SEARCH_CACHE_MAX_ENTRIES;
     constructor(config: Config);
+    private getRateLimitRetryLimit;
+    private getRateLimitWaitCapMs;
     private getRepo;
     private getBucketForUrl;
     getRateLimitInfo(bucket?: RateLimitBucket): RateLimitInfo | null;
@@ -25,8 +31,9 @@ export declare class GitHubClient {
      * effectively empty; normal throttling is handled by the code-search queue.
      */
     private guardRateLimit;
-    /** Schedule a /search/code request so we do at most ~1 every 2 seconds. */
+    /** Schedule a /search/code request so we do at most ~1 every ~7 seconds. */
     private scheduleCodeSearch;
+    private pruneSearchCaches;
     private request;
     fetchVersions(limit?: number, packageName?: string): Promise<MneVersion[]>;
     getLatestVersion(packageName?: string): Promise<string>;

package/dist/github/client.d.ts.map

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package/dist/github/client.js

@@ -20,8 +20,27 @@ export class GitHubClient {
     // enforce a minimum interval between them.
     codeQueue = Promise.resolve();
     lastCodeSearchAt = 0;
+    // Lightweight in-memory caches for GitHub search endpoints. These sit in
+    // front of the remote API to avoid repeating identical searches across
+    // tools and within a single MCP server process.
+    searchTtlMs;
+    codeSearchCache = new Map();
+    issueSearchCache = new Map();
+    static SEARCH_CACHE_MAX_ENTRIES = 200;
     constructor(config) {
         this.config = config;
+        // Fall back to 60 minutes if searchCacheTtlMinutes is missing on a
+        // partial Config (e.g. in tests that construct GitHubClient with `as any`).
+        const ttlMinutes = config.searchCacheTtlMinutes ?? 60;
+        this.searchTtlMs = ttlMinutes * 60 * 1000;
+    }
+    getRateLimitRetryLimit(bucket) {
+        // Code-search is typically optional and has a tiny quota, so fail fast
+        // instead of stalling end-user requests for several minutes.
+        return bucket === 'code' ? 1 : 3;
+    }
+    getRateLimitWaitCapMs(bucket) {
+        return bucket === 'code' ? 5_000 : 15_000;
     }
     getRepo(packageName) {
         return getPackageInfo(packageName).repo;
@@ -62,18 +81,19 @@ export class GitHubClient {
             }
         }
     }
-    async handleRateLimit(response) {
+    async handleRateLimit(response, bucket) {
         if (response.status === 403 || response.status === 429) {
             const reset = response.headers.get('x-ratelimit-reset');
             if (reset) {
                 const waitTime = parseInt(reset, 10) * 1000 - Date.now();
-                // Cap at 60 s so a far-future reset timestamp never hangs the server.
+                // Cap waits aggressively for user-facing MCP latency.
                 // Add ±10 % jitter to spread retries when multiple requests hit the limit.
-                const base = Math.min(Math.max(0, waitTime + 1000), 60_000);
+                const base = Math.min(Math.max(0, waitTime + 1000), this.getRateLimitWaitCapMs(bucket));
                 const jitter = base * (0.9 + Math.random() * 0.2);
                 const cappedWait = Math.round(jitter);
                 if (cappedWait > 0) {
                     this.logger.warn(`Rate limited. Waiting ${cappedWait}ms`, {
+                        bucket,
                         status: response.status,
                         resetInMs: waitTime,
                     });
@@ -102,7 +122,7 @@ export class GitHubClient {
         if (!info || bucket !== 'code' || info.remaining > 1)
             return;
         const waitMs = Math.max(0, info.resetAt.getTime() - Date.now() + 500);
-        const cappedWait = Math.min(waitMs, 60_000);
+        const cappedWait = Math.min(waitMs, this.getRateLimitWaitCapMs(bucket));
         if (cappedWait > 0) {
             this.logger.warn('Rate limit nearly exhausted — pausing before next request', {
                 bucket,
@@ -113,9 +133,12 @@ export class GitHubClient {
             await new Promise(resolve => setTimeout(resolve, cappedWait));
         }
     }
-    /** Schedule a /search/code request so we do at most ~1 every 2 seconds. */
+    /** Schedule a /search/code request so we do at most ~1 every ~7 seconds. */
     scheduleCodeSearch(fn) {
-        const MIN_INTERVAL_MS = 2000;
+        // GitHub's /search/code endpoint has a much lower quota than core
+        // REST APIs (≈10 requests/minute). We space out calls so that even
+        // under heavy interactive use we stay comfortably below that bucket.
+        const MIN_INTERVAL_MS = 7000;
         const now = Date.now();
         const delay = Math.max(0, this.lastCodeSearchAt + MIN_INTERVAL_MS - now);
         const run = async () => {
@@ -130,6 +153,40 @@ export class GitHubClient {
         this.codeQueue = queued.then(() => undefined, () => undefined);
         return queued;
     }
+    pruneSearchCaches() {
+        const now = Date.now();
+        // Drop expired entries first.
+        for (const [key, entry] of this.codeSearchCache.entries()) {
+            if (entry.expiresAt <= now)
+                this.codeSearchCache.delete(key);
+        }
+        for (const [key, entry] of this.issueSearchCache.entries()) {
+            if (entry.expiresAt <= now)
+                this.issueSearchCache.delete(key);
+        }
+        // If still above the soft limit, evict oldest entries by expiry time.
+        const total = this.codeSearchCache.size + this.issueSearchCache.size;
+        if (total <= GitHubClient.SEARCH_CACHE_MAX_ENTRIES)
+            return;
+        const all = [];
+        for (const [key, entry] of this.codeSearchCache.entries()) {
+            all.push({ key, expiresAt: entry.expiresAt, which: 'code' });
+        }
+        for (const [key, entry] of this.issueSearchCache.entries()) {
+            all.push({ key, expiresAt: entry.expiresAt, which: 'issue' });
+        }
+        all.sort((a, b) => a.expiresAt - b.expiresAt);
+        const toRemove = total - GitHubClient.SEARCH_CACHE_MAX_ENTRIES;
+        for (let i = 0; i < toRemove && i < all.length; i++) {
+            const victim = all[i];
+            if (victim.which === 'code') {
+                this.codeSearchCache.delete(victim.key);
+            }
+            else {
+                this.issueSearchCache.delete(victim.key);
+            }
+        }
+    }
     async request(url, options = {}, retryCount = 0) {
         const fullUrl = url.startsWith('http') ? url : `${this.config.githubApiBase}${url}`;
         const bucket = this.getBucketForUrl(url);
@@ -159,9 +216,15 @@ export class GitHubClient {
                 });
                 this.updateRateLimit(response, bucket);
                 if (!response.ok) {
-                    if ((response.status === 403 || response.status === 429) && retryCount < 3) {
-                        await this.handleRateLimit(response);
-                        return this.request(url, options, retryCount + 1);
+                    if (response.status === 403 || response.status === 429) {
+                        const retryLimit = this.getRateLimitRetryLimit(bucket);
+                        if (retryCount < retryLimit) {
+                            await this.handleRateLimit(response, bucket);
+                            return this.request(url, options, retryCount + 1);
+                        }
+                        if (bucket === 'code') {
+                            throw new Error(`GitHub code-search rate limit exceeded: ${response.status} ${response.statusText}`);
+                        }
                     }
                     // Retry transient GitHub server errors with exponential backoff.
                     if (response.status >= 500 && response.status < 600 && retryCount < 3) {
@@ -185,7 +248,10 @@ export class GitHubClient {
                 this.inFlight.delete(fullUrl);
             }
         };
-        const fetchPromise = bucket === 'code'
+        // Only the first /search/code attempt goes through the global queue.
+        // Retries run inline to avoid queue self-deadlocks (retry waiting on
+        // a queue item that itself is waiting for the retry to complete).
+        const fetchPromise = bucket === 'code' && retryCount === 0
             ? this.scheduleCodeSearch(doRequest)
             : doRequest();
         if (isIdempotent) {
@@ -248,13 +314,34 @@ export class GitHubClient {
         let q = `${query} repo:${repo}`;
         if (options.path)
             q += ` path:${options.path}`;
-        const url = `/search/code?q=${encodeURIComponent(q)}&per_page=${options.perPage || 10}`;
-        if (options.textMatches) {
-            return this.request(url, {
-                headers: { Accept: 'application/vnd.github.v3.text-match+json' },
-            });
+        const perPage = options.perPage || 10;
+        const textMatches = !!options.textMatches;
+        const versionKey = options.version ?? 'latest';
+        const cacheKey = [
+            repo,
+            versionKey,
+            options.path || '',
+            perPage,
+            textMatches ? 'tm1' : 'tm0',
+            query,
+        ].join('|');
+        const cached = this.codeSearchCache.get(cacheKey);
+        if (cached && cached.expiresAt > Date.now()) {
+            this.logger.debug('GitHub code-search cache hit', { repo, query, path: options.path, perPage });
+            return cached.data;
         }
-        return this.request(url);
+        const url = `/search/code?q=${encodeURIComponent(q)}&per_page=${perPage}`;
+        const result = options.textMatches
+            ? await this.request(url, {
+                headers: { Accept: 'application/vnd.github.v3.text-match+json' },
+            })
+            : await this.request(url);
+        this.codeSearchCache.set(cacheKey, {
+            data: result,
+            expiresAt: Date.now() + this.searchTtlMs,
+        });
+        this.pruneSearchCaches();
+        return result;
     }
     async searchIssues(query, options = {}) {
         const repo = this.getRepo(options.packageName);
@@ -264,8 +351,43 @@ export class GitHubClient {
         if (options.labels)
             options.labels.forEach(l => q += ` label:"${l}"`);
         const sortParam = options.sort ? `&sort=${options.sort}` : '&sort=relevance';
+        const perPage = options.perPage || 5;
+        const cacheKey = [
+            repo,
+            options.state || 'all',
+            (options.labels || []).join(','),
+            perPage,
+            options.sort || 'relevance',
+            query,
+        ].join('|');
         try {
-            const response = await this.request(`/search/issues?q=${encodeURIComponent(q)}&per_page=${options.perPage || 5}${sortParam}`);
+            const cached = this.issueSearchCache.get(cacheKey);
+            if (cached && cached.expiresAt > Date.now()) {
+                this.logger.debug('GitHub issue-search cache hit', {
+                    repo,
+                    query,
+                    state: options.state,
+                    labels: options.labels,
+                    perPage,
+                });
+                return cached.data.items.map(item => ({
+                    source: 'github-issue',
+                    title: item.title,
+                    number: item.number,
+                    state: item.state,
+                    url: item.html_url,
+                    createdAt: item.created_at,
+                    updatedAt: item.updated_at,
+                    commentsCount: item.comments,
+                    labels: item.labels.map(l => l.name),
+                }));
+            }
+            const response = await this.request(`/search/issues?q=${encodeURIComponent(q)}&per_page=${perPage}${sortParam}`);
+            this.issueSearchCache.set(cacheKey, {
+                data: response,
+                expiresAt: Date.now() + this.searchTtlMs,
+            });
+            this.pruneSearchCaches();
             return response.items.map(item => ({
                 source: 'github-issue',
                 title: item.title,

package/dist/github/client.js.map

@@ -1 +1 @@
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package/dist/tools/searchMneDocs.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"searchMneDocs.d.ts","sourceRoot":"","sources":["../../src/tools/searchMneDocs.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAAE,YAAY,EAAE,WAAW,EAAqC,MAAM,aAAa,CAAC;AAY3F,eAAO,MAAM,UAAU;;;;;;;;;;;;;;;;CAWtB,CAAC;AAEF,wBAAsB,aAAa,CAC/B,MAAM,EAAE,OAAO,EACf,OAAO,EAAE,WAAW,GACrB,OAAO,CAAC,YAAY,CAAC,CAqEvB;AAED,OAAO,EAAE,aAAa,IAAI,OAAO,EAAE,CAAC"}
+{"version":3,"file":"searchMneDocs.d.ts","sourceRoot":"","sources":["../../src/tools/searchMneDocs.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAAE,YAAY,EAAE,WAAW,EAAqC,MAAM,aAAa,CAAC;AAa3F,eAAO,MAAM,UAAU;;;;;;;;;;;;;;;;CAWtB,CAAC;AAIF,wBAAsB,aAAa,CAC/B,MAAM,EAAE,OAAO,EACf,OAAO,EAAE,WAAW,GACrB,OAAO,CAAC,YAAY,CAAC,CAoGvB;AAED,OAAO,EAAE,aAAa,IAAI,OAAO,EAAE,CAAC"}

package/dist/tools/searchMneDocs.js

@@ -2,6 +2,7 @@ import { z } from 'zod';
 import { MNE_PACKAGE_NAMES, getPackageInfo, packageSchema } from '../config.js';
 import { READ_ONLY_TOOL_ANNOTATIONS } from './annotations.js';
 import { resolveVersion } from '../utils/helpers.js';
+import { getLogger } from '../utils/logger.js';
 const SearchMneDocsParamsSchema = z.object({
     query: z.string().min(1, 'Query is required'),
     version: z.string().optional(),
@@ -20,6 +21,7 @@ export const definition = {
     },
     annotations: READ_ONLY_TOOL_ANNOTATIONS,
 };
+const logger = getLogger();
 export async function searchMneDocs(params, context) {
     const { query, version, maxResultsPerSource = 5, package: packageName } = SearchMneDocsParamsSchema.parse(params);
     const pkg = packageName || 'mne-python';
@@ -33,18 +35,37 @@ export async function searchMneDocs(params, context) {
             return cachedSearch;
         }
     }
+    const isRateLimitError = (error) => error instanceof Error && /rate limit|429|403/i.test(error.message);
+    let codeSearchUnavailable = false;
+    let codeItems = [];
     // 1. GitHub Code Search (source code) — request text_matches for snippets
-    const codeResults = await context.github.searchCode(`${query} path:${packageInfo.sourcePath}`, { version: resolvedVersion, perPage: maxResultsPerSource, packageName, textMatches: true });
-    const githubCode = codeResults.items.map(item => ({
+    try {
+        const codeResults = await context.github.searchCode(`${query} path:${packageInfo.sourcePath}`, { version: resolvedVersion, perPage: maxResultsPerSource, packageName, textMatches: true });
+        codeItems = codeResults.items;
+    }
+    catch (error) {
+        codeSearchUnavailable = isRateLimitError(error);
+        logger.warn('Code search failed in search_mne_docs', { query, package: pkg, error });
+    }
+    const githubCode = codeItems.map(item => ({
         source: 'github-code',
         file: item.name,
         path: item.path,
         htmlUrl: item.html_url,
         snippet: item.text_matches?.[0]?.fragment?.slice(0, 300).trim(),
     }));
+    let docItems = [];
     // 2. GitHub Docs Search (doc/ folder) — request text_matches for snippets
-    const docResults = await context.github.searchCode(`${query} path:doc/`, { version: resolvedVersion, perPage: maxResultsPerSource, packageName, textMatches: true });
-    const githubDocs = docResults.items.map(item => ({
+    if (!codeSearchUnavailable) {
+        try {
+            const docResults = await context.github.searchCode(`${query} path:doc/`, { version: resolvedVersion, perPage: maxResultsPerSource, packageName, textMatches: true });
+            docItems = docResults.items;
+        }
+        catch (error) {
+            logger.warn('Docs search failed in search_mne_docs', { query, package: pkg, error });
+        }
+    }
+    const githubDocs = docItems.map(item => ({
         source: 'github-doc',
         file: item.name,
         path: item.path,

package/dist/tools/searchMneDocs.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "mne-docs-mcp",
-  "version": "1.0.26",
+  "version": "1.0.27",
   "mcpName": "io.github.weiyongxu/mne-docs",
   "description": "MCP server providing access to MNE-Python documentation, source code, GitHub issues, and community forum",
   "type": "module",