mindlore 0.2.0 → 0.3.0

package/dist/scripts/mindlore-health-check.js

@@ -0,0 +1,337 @@
+#!/usr/bin/env node
+"use strict";
+/**
+ * mindlore-health-check — 18-point structural health check for .mindlore/
+ *
+ * Usage: node dist/scripts/mindlore-health-check.js [path-to-mindlore-dir]
+ *
+ * Exit codes: 0 = healthy, 1 = issues found
+ */
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const fs_1 = __importDefault(require("fs"));
+const path_1 = __importDefault(require("path"));
+const constants_js_1 = require("./lib/constants.js");
+const { parseFrontmatter: _parseFm, getAllMdFiles: _getAllMd, } = require((0, constants_js_1.resolveHookCommon)(__dirname));
+function parseFrontmatter(content) {
+    const { meta } = _parseFm(content);
+    return Object.keys(meta).length > 0 ? meta : null;
+}
+function getAllMdFiles(dir) {
+    return _getAllMd(dir, new Set());
+}
+class HealthChecker {
+    baseDir;
+    results = [];
+    passed = 0;
+    failed = 0;
+    warnings = 0;
+    constructor(baseDir) {
+        this.baseDir = baseDir;
+    }
+    check(name, fn) {
+        try {
+            const result = fn();
+            if (result.ok) {
+                this.passed++;
+                this.results.push({ name, status: 'PASS', detail: result.detail });
+            }
+            else if (result.warn) {
+                this.warnings++;
+                this.results.push({ name, status: 'WARN', detail: result.detail });
+            }
+            else {
+                this.failed++;
+                this.results.push({ name, status: 'FAIL', detail: result.detail });
+            }
+        }
+        catch (err) {
+            this.failed++;
+            const message = err instanceof Error ? err.message : String(err);
+            this.results.push({ name, status: 'FAIL', detail: message });
+        }
+    }
+    checkDirectories() {
+        for (const dir of constants_js_1.DIRECTORIES) {
+            this.check(`Directory: ${dir}/`, () => {
+                const dirPath = path_1.default.join(this.baseDir, dir);
+                if (fs_1.default.existsSync(dirPath)) {
+                    return { ok: true, detail: 'exists' };
+                }
+                return { ok: false, detail: 'missing' };
+            });
+        }
+    }
+    checkSchema() {
+        this.check('SCHEMA.md', () => {
+            const schemaPath = path_1.default.join(this.baseDir, 'SCHEMA.md');
+            if (!fs_1.default.existsSync(schemaPath)) {
+                return { ok: false, detail: 'missing' };
+            }
+            const content = fs_1.default.readFileSync(schemaPath, 'utf8');
+            if (content.length < 100) {
+                return { ok: false, detail: 'too short (corrupted?)' };
+            }
+            if (!content.includes('## 1. Identity')) {
+                return { warn: true, detail: 'may be outdated (missing Identity section)' };
+            }
+            return { ok: true, detail: `${content.split('\n').length} lines` };
+        });
+    }
+    checkIndex() {
+        this.check('INDEX.md format', () => {
+            const indexPath = path_1.default.join(this.baseDir, 'INDEX.md');
+            if (!fs_1.default.existsSync(indexPath)) {
+                return { ok: false, detail: 'missing' };
+            }
+            const content = fs_1.default.readFileSync(indexPath, 'utf8');
+            const lines = content.trim().split('\n');
+            if (lines.length > 60) {
+                return {
+                    warn: true,
+                    detail: `${lines.length} lines (should be ~15-60, consider trimming)`,
+                };
+            }
+            return { ok: true, detail: `${lines.length} lines` };
+        });
+    }
+    checkDatabase() {
+        this.check('mindlore.db FTS5', () => {
+            const dbPath = path_1.default.join(this.baseDir, constants_js_1.DB_NAME);
+            if (!fs_1.default.existsSync(dbPath)) {
+                return { ok: false, detail: 'database missing' };
+            }
+            let Database;
+            try {
+                Database = require('better-sqlite3');
+            }
+            catch (_err) {
+                return { warn: true, detail: 'better-sqlite3 not available, cannot verify' };
+            }
+            const db = new Database(dbPath, { readonly: true });
+            try {
+                const result = db.prepare('SELECT count(*) as cnt FROM mindlore_fts').get();
+                const hashResult = db
+                    .prepare('SELECT count(*) as cnt FROM file_hashes')
+                    .get();
+                let schemaVersion = 0;
+                try {
+                    db.prepare('SELECT tags, quality FROM mindlore_fts LIMIT 0').run();
+                    schemaVersion = 9;
+                }
+                catch (_err) {
+                    try {
+                        db.prepare('SELECT slug, description, category, title FROM mindlore_fts LIMIT 0').run();
+                        schemaVersion = 7;
+                    }
+                    catch (_err2) {
+                        schemaVersion = 2;
+                    }
+                }
+                if (schemaVersion < 9) {
+                    return {
+                        warn: true,
+                        detail: `${result.cnt} indexed, ${hashResult.cnt} hashes — ${schemaVersion}-col schema (run: npx mindlore init to upgrade to 9-col)`,
+                    };
+                }
+                return {
+                    ok: true,
+                    detail: `${result.cnt} indexed, ${hashResult.cnt} hashes, 9-col schema`,
+                };
+            }
+            catch (err) {
+                const message = err instanceof Error ? err.message : String(err);
+                return { ok: false, detail: `FTS5 error: ${message}` };
+            }
+            finally {
+                db.close();
+            }
+        });
+    }
+    checkOrphans() {
+        this.check('Orphan files', () => {
+            const dbPath = path_1.default.join(this.baseDir, constants_js_1.DB_NAME);
+            if (!fs_1.default.existsSync(dbPath)) {
+                return { warn: true, detail: 'no database, cannot check' };
+            }
+            let Database;
+            try {
+                Database = require('better-sqlite3');
+            }
+            catch (_err) {
+                return { warn: true, detail: 'better-sqlite3 not available' };
+            }
+            const mdFiles = getAllMdFiles(this.baseDir).filter(constants_js_1.isContentFile);
+            const db = new Database(dbPath, { readonly: true });
+            try {
+                const indexed = new Set();
+                const rows = db.prepare('SELECT path FROM file_hashes').all();
+                for (const row of rows) {
+                    indexed.add(path_1.default.resolve(row.path));
+                }
+                const orphans = mdFiles.filter((f) => !indexed.has(path_1.default.resolve(f)));
+                if (orphans.length === 0) {
+                    return { ok: true, detail: 'no orphans' };
+                }
+                if (orphans.length <= 3) {
+                    return {
+                        warn: true,
+                        detail: `${orphans.length} unindexed: ${orphans.map((f) => path_1.default.basename(f)).join(', ')}`,
+                    };
+                }
+                return {
+                    ok: false,
+                    detail: `${orphans.length} unindexed files — run: npm run index`,
+                };
+            }
+            finally {
+                db.close();
+            }
+        });
+    }
+    checkFrontmatter() {
+        this.check('Frontmatter: slug + type', () => {
+            const mdFiles = getAllMdFiles(this.baseDir).filter(constants_js_1.isContentFile);
+            let missingSlug = 0;
+            let missingType = 0;
+            let wrongDir = 0;
+            for (const file of mdFiles) {
+                const content = fs_1.default.readFileSync(file, 'utf8').replace(/\r\n/g, '\n');
+                const fm = parseFrontmatter(content);
+                if (!fm) {
+                    missingSlug++;
+                    missingType++;
+                    continue;
+                }
+                if (!fm.slug)
+                    missingSlug++;
+                if (!fm.type) {
+                    missingType++;
+                    continue;
+                }
+                const expectedDir = constants_js_1.TYPE_TO_DIR[fm.type];
+                if (expectedDir) {
+                    const parentDir = path_1.default.basename(path_1.default.dirname(file));
+                    if (parentDir !== expectedDir) {
+                        wrongDir++;
+                    }
+                }
+            }
+            const issues = [];
+            if (missingSlug > 0)
+                issues.push(`${missingSlug} missing slug`);
+            if (missingType > 0)
+                issues.push(`${missingType} missing type`);
+            if (wrongDir > 0)
+                issues.push(`${wrongDir} type-dir mismatch`);
+            if (issues.length === 0) {
+                return {
+                    ok: true,
+                    detail: `${mdFiles.length} files validated`,
+                };
+            }
+            if (wrongDir > 0) {
+                return { ok: false, detail: issues.join(', ') };
+            }
+            return { warn: true, detail: issues.join(', ') };
+        });
+    }
+    checkStaleDeltas() {
+        this.check('Stale deltas', () => {
+            const diaryDir = path_1.default.join(this.baseDir, 'diary');
+            if (!fs_1.default.existsSync(diaryDir))
+                return { ok: true, detail: 'no diary dir' };
+            const now = Date.now();
+            const thirtyDays = 30 * 24 * 60 * 60 * 1000;
+            let stale = 0;
+            const files = fs_1.default.readdirSync(diaryDir).filter((f) => f.startsWith('delta-') && f.endsWith('.md'));
+            for (const file of files) {
+                const fullPath = path_1.default.join(diaryDir, file);
+                const content = fs_1.default.readFileSync(fullPath, 'utf8').replace(/\r\n/g, '\n');
+                const fm = parseFrontmatter(content);
+                if (fm && fm.archived === 'true')
+                    continue;
+                const stat = fs_1.default.statSync(fullPath);
+                if (now - stat.mtimeMs > thirtyDays)
+                    stale++;
+            }
+            if (stale === 0)
+                return { ok: true, detail: `${files.length} deltas, none stale` };
+            return { warn: true, detail: `${stale} deltas older than 30 days without archived flag — run /mindlore-log reflect` };
+        });
+    }
+    checkConflictingAnalyses() {
+        this.check('Conflicting analyses', () => {
+            const analysesDir = path_1.default.join(this.baseDir, 'analyses');
+            if (!fs_1.default.existsSync(analysesDir))
+                return { ok: true, detail: 'no analyses dir' };
+            const files = fs_1.default.readdirSync(analysesDir).filter((f) => f.endsWith('.md'));
+            if (files.length < 2)
+                return { ok: true, detail: `${files.length} analyses, no conflict possible` };
+            const tagMap = {};
+            for (const file of files) {
+                const content = fs_1.default.readFileSync(path_1.default.join(analysesDir, file), 'utf8').replace(/\r\n/g, '\n');
+                const fm = parseFrontmatter(content);
+                if (!fm?.tags || !fm.confidence)
+                    continue;
+                const tags = Array.isArray(fm.tags) ? fm.tags : String(fm.tags).split(',').map((t) => t.trim());
+                for (const tag of tags) {
+                    if (!tagMap[tag])
+                        tagMap[tag] = [];
+                    const entries = tagMap[tag];
+                    if (entries)
+                        entries.push({ file, confidence: String(fm.confidence) });
+                }
+            }
+            const conflicts = [];
+            for (const [tag, entries] of Object.entries(tagMap)) {
+                if (!entries || entries.length < 2)
+                    continue;
+                const confidences = new Set(entries.map((e) => e.confidence));
+                if (confidences.size > 1) {
+                    conflicts.push(`${tag}: ${entries.map((e) => `${e.file}(${e.confidence})`).join(' vs ')}`);
+                }
+            }
+            if (conflicts.length === 0)
+                return { ok: true, detail: `${files.length} analyses, no conflicts` };
+            return { warn: true, detail: `${conflicts.length} tag conflicts: ${conflicts.slice(0, 2).join('; ')}` };
+        });
+    }
+    run() {
+        this.checkDirectories();
+        this.checkSchema();
+        this.checkIndex();
+        this.checkDatabase();
+        this.checkOrphans();
+        this.checkFrontmatter();
+        this.checkStaleDeltas();
+        this.checkConflictingAnalyses();
+        return this;
+    }
+    report() {
+        console.log('\n  Mindlore Health Check\n');
+        for (const r of this.results) {
+            const icon = r.status === 'PASS' ? '+' : r.status === 'WARN' ? '~' : '-';
+            console.log(`  [${icon}] ${r.name}: ${r.detail}`);
+        }
+        const total = this.passed + this.failed + this.warnings;
+        console.log(`\n  Score: ${this.passed}/${total} passed, ${this.warnings} warnings, ${this.failed} failed\n`);
+        return this.failed === 0;
+    }
+}
+// ── Main ───────────────────────────────────────────────────────────────
+function main() {
+    const baseDir = process.argv[2] ?? path_1.default.join(process.cwd(), '.mindlore');
+    if (!fs_1.default.existsSync(baseDir)) {
+        console.error(`  .mindlore/ not found at: ${baseDir}`);
+        console.error('  Run: npx mindlore init');
+        process.exit(1);
+    }
+    const checker = new HealthChecker(baseDir);
+    const healthy = checker.run().report();
+    process.exit(healthy ? 0 : 1);
+}
+main();
+//# sourceMappingURL=mindlore-health-check.js.map

package/dist/scripts/mindlore-health-check.js.map

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package/dist/scripts/uninstall.d.ts

@@ -0,0 +1,10 @@
+#!/usr/bin/env node
+/**
+ * mindlore uninstall — Remove Mindlore hooks, skills, and optionally project data.
+ *
+ * Usage: npx mindlore uninstall [--all] [--global]
+ *
+ * --all: also remove .mindlore/ project data (without flag, only hooks + skills)
+ */
+export {};
+//# sourceMappingURL=uninstall.d.ts.map

package/dist/scripts/uninstall.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"uninstall.d.ts","sourceRoot":"","sources":["../../scripts/uninstall.ts"],"names":[],"mappings":";AAEA;;;;;;GAMG"}

package/dist/scripts/uninstall.js

@@ -0,0 +1,153 @@
+#!/usr/bin/env node
+"use strict";
+/**
+ * mindlore uninstall — Remove Mindlore hooks, skills, and optionally project data.
+ *
+ * Usage: npx mindlore uninstall [--all] [--global]
+ *
+ * --all: also remove .mindlore/ project data (without flag, only hooks + skills)
+ */
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const fs_1 = __importDefault(require("fs"));
+const path_1 = __importDefault(require("path"));
+const constants_js_1 = require("./lib/constants.js");
+// ── Remove hooks from settings.json ────────────────────────────────────
+function removeHooks() {
+    const settingsPath = path_1.default.join((0, constants_js_1.homedir)(), '.claude', 'settings.json');
+    if (!fs_1.default.existsSync(settingsPath)) {
+        (0, constants_js_1.log)('No settings.json found, skipping hooks');
+        return 0;
+    }
+    let settings;
+    try {
+        settings = JSON.parse(fs_1.default.readFileSync(settingsPath, 'utf8'));
+    }
+    catch (_err) {
+        (0, constants_js_1.log)('Could not parse settings.json, skipping hooks');
+        return 0;
+    }
+    if (!settings.hooks)
+        return 0;
+    let removed = 0;
+    for (const event of Object.keys(settings.hooks)) {
+        const entries = settings.hooks[event];
+        if (!Array.isArray(entries))
+            continue;
+        const filtered = entries.filter((entry) => {
+            const hooks = entry.hooks ?? [];
+            const hasMindlore = hooks.some((h) => (h.command ?? '').includes('mindlore-'));
+            const flatMindlore = (entry.command ?? '').includes('mindlore-');
+            if (hasMindlore || flatMindlore) {
+                removed++;
+                return false;
+            }
+            return true;
+        });
+        settings.hooks[event] = filtered;
+        if (settings.hooks[event].length === 0) {
+            delete settings.hooks[event];
+        }
+    }
+    if (removed > 0) {
+        fs_1.default.writeFileSync(settingsPath, JSON.stringify(settings, null, 2), 'utf8');
+    }
+    return removed;
+}
+// ── Remove skills from ~/.claude/skills/ ───────────────────────────────
+function removeSkills() {
+    const skillsDir = path_1.default.join((0, constants_js_1.homedir)(), '.claude', 'skills');
+    if (!fs_1.default.existsSync(skillsDir))
+        return 0;
+    const mindloreSkills = fs_1.default
+        .readdirSync(skillsDir)
+        .filter((d) => d.startsWith('mindlore-'));
+    let removed = 0;
+    for (const skill of mindloreSkills) {
+        const skillPath = path_1.default.join(skillsDir, skill);
+        fs_1.default.rmSync(skillPath, { recursive: true, force: true });
+        removed++;
+    }
+    return removed;
+}
+// ── Remove SCHEMA.md from projectDocFiles ──────────────────────────────
+function removeFromProjectDocs() {
+    const projectSettingsPath = path_1.default.join(process.cwd(), '.claude', 'settings.json');
+    if (!fs_1.default.existsSync(projectSettingsPath))
+        return false;
+    let settings;
+    try {
+        settings = JSON.parse(fs_1.default.readFileSync(projectSettingsPath, 'utf8'));
+    }
+    catch (_err) {
+        return false;
+    }
+    if (!settings.projectDocFiles)
+        return false;
+    const before = settings.projectDocFiles.length;
+    settings.projectDocFiles = settings.projectDocFiles.filter((p) => !p.includes('mindlore'));
+    if (settings.projectDocFiles.length < before) {
+        fs_1.default.writeFileSync(projectSettingsPath, JSON.stringify(settings, null, 2), 'utf8');
+        return true;
+    }
+    return false;
+}
+// ── Remove .mindlore/ project data ─────────────────────────────────────
+function removeProjectData() {
+    const mindloreDir = path_1.default.join(process.cwd(), '.mindlore');
+    if (!fs_1.default.existsSync(mindloreDir)) {
+        (0, constants_js_1.log)('No .mindlore/ directory in current project');
+        return false;
+    }
+    fs_1.default.rmSync(mindloreDir, { recursive: true, force: true });
+    return true;
+}
+// ── Main ───────────────────────────────────────────────────────────────
+function main() {
+    const args = process.argv.slice(2);
+    const removeAll = args.includes('--all');
+    const isGlobal = args.includes('--global');
+    const scopeLabel = isGlobal ? 'global (~/.mindlore/)' : 'project (.mindlore/)';
+    console.log(`\n  Mindlore — Uninstall [${scopeLabel}]\n`);
+    // Hooks
+    const hooksRemoved = removeHooks();
+    (0, constants_js_1.log)(hooksRemoved > 0
+        ? `Removed ${hooksRemoved} hooks from ~/.claude/settings.json`
+        : 'No hooks found');
+    // Skills
+    const skillsRemoved = removeSkills();
+    (0, constants_js_1.log)(skillsRemoved > 0
+        ? `Removed ${skillsRemoved} skills from ~/.claude/skills/`
+        : 'No skills found');
+    // Project doc files
+    const docsRemoved = removeFromProjectDocs();
+    (0, constants_js_1.log)(docsRemoved
+        ? 'Removed SCHEMA.md from project settings'
+        : 'No project doc references found');
+    // Data removal (only with --all)
+    if (removeAll) {
+        if (isGlobal) {
+            if (fs_1.default.existsSync(constants_js_1.GLOBAL_MINDLORE_DIR)) {
+                fs_1.default.rmSync(constants_js_1.GLOBAL_MINDLORE_DIR, { recursive: true, force: true });
+                (0, constants_js_1.log)('Removed ~/.mindlore/ global data');
+            }
+            else {
+                (0, constants_js_1.log)('No ~/.mindlore/ directory found');
+            }
+        }
+        else {
+            const dataRemoved = removeProjectData();
+            (0, constants_js_1.log)(dataRemoved
+                ? 'Removed .mindlore/ project data'
+                : 'No .mindlore/ directory found');
+        }
+    }
+    else {
+        (0, constants_js_1.log)(`${isGlobal ? '~/.mindlore/' : '.mindlore/'} data kept (use --all to remove)`);
+    }
+    console.log('\n  Done! Mindlore has been uninstalled.\n');
+}
+main();
+//# sourceMappingURL=uninstall.js.map

package/dist/scripts/uninstall.js.map

@@ -0,0 +1 @@
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package/dist/tests/compounding.test.d.ts

@@ -0,0 +1,8 @@
+/**
+ * Compounding test — v0.2 integration test
+ *
+ * Tests the full cycle: query → writeback → reindex → next query finds it.
+ * Skipped in v0.1 (configured in jest.config.cjs testPathIgnorePatterns).
+ */
+export {};
+//# sourceMappingURL=compounding.test.d.ts.map

package/dist/tests/compounding.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"compounding.test.d.ts","sourceRoot":"","sources":["../../tests/compounding.test.ts"],"names":[],"mappings":"AAAA;;;;;GAKG"}

package/dist/tests/compounding.test.js

@@ -0,0 +1,51 @@
+"use strict";
+/**
+ * Compounding test — v0.2 integration test
+ *
+ * Tests the full cycle: query → writeback → reindex → next query finds it.
+ * Skipped in v0.1 (configured in jest.config.cjs testPathIgnorePatterns).
+ */
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const fs_1 = __importDefault(require("fs"));
+const path_1 = __importDefault(require("path"));
+const db_js_1 = require("./helpers/db.js");
+const TEST_DIR = path_1.default.join(__dirname, '..', '.test-mindlore-compounding');
+const DB_PATH = path_1.default.join(TEST_DIR, 'mindlore.db');
+beforeEach(() => {
+    (0, db_js_1.setupTestDir)(TEST_DIR, ['sources', 'insights']);
+});
+afterEach(() => {
+    (0, db_js_1.teardownTestDir)(TEST_DIR);
+});
+describe('Knowledge Compounding', () => {
+    test('writeback → reindex → query should find the new content', () => {
+        const db = (0, db_js_1.createTestDb)(DB_PATH);
+        // Step 1: Index an existing source
+        const sourcePath = path_1.default.join(TEST_DIR, 'sources', 'react-hooks.md');
+        const sourceContent = '---\nslug: react-hooks\ntype: source\n---\n# React Hooks\n\nUseEffect cleanup patterns.';
+        fs_1.default.writeFileSync(sourcePath, sourceContent);
+        (0, db_js_1.insertFts)(db, { path: sourcePath, slug: 'react-hooks', description: 'UseEffect cleanup patterns', type: 'source', category: 'sources', title: 'React Hooks', content: sourceContent, tags: '', quality: null });
+        db.prepare('INSERT INTO file_hashes (path, content_hash, last_indexed) VALUES (?, ?, ?)').run(sourcePath, (0, db_js_1.sha256)(sourceContent), new Date().toISOString());
+        // Step 2: Simulate query → writeback (agent creates an insight)
+        const insightPath = path_1.default.join(TEST_DIR, 'insights', 'react-cleanup.md');
+        const insightContent = '---\nslug: react-cleanup\ntype: insight\n---\n# React Cleanup Pattern\n\nAlways return cleanup function from useEffect to avoid memory leaks.';
+        fs_1.default.writeFileSync(insightPath, insightContent);
+        // Step 3: Reindex (simulates the hook)
+        (0, db_js_1.insertFts)(db, { path: insightPath, slug: 'react-cleanup', description: 'Avoid memory leaks with useEffect cleanup', type: 'insight', category: 'insights', title: 'React Cleanup Pattern', content: insightContent, tags: '', quality: null });
+        db.prepare('INSERT INTO file_hashes (path, content_hash, last_indexed) VALUES (?, ?, ?)').run(insightPath, (0, db_js_1.sha256)(insightContent), new Date().toISOString());
+        // Step 4: Next query should find the writeback content
+        const results = db
+            .prepare(`SELECT path FROM mindlore_fts
+         WHERE mindlore_fts MATCH ?
+         ORDER BY rank
+         LIMIT 3`)
+            .all('memory leaks cleanup');
+        expect(results.length).toBeGreaterThan(0);
+        expect(results.some((r) => r.path.includes('react-cleanup'))).toBe(true);
+        db.close();
+    });
+});
+//# sourceMappingURL=compounding.test.js.map

package/dist/tests/compounding.test.js.map

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package/dist/tests/cwd-changed.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=cwd-changed.test.d.ts.map

package/dist/tests/cwd-changed.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"cwd-changed.test.d.ts","sourceRoot":"","sources":["../../tests/cwd-changed.test.ts"],"names":[],"mappings":""}