mindlore 0.1.0 → 0.2.1

package/dist/scripts/mindlore-fts5-index.js

@@ -0,0 +1,89 @@
+#!/usr/bin/env node
+"use strict";
+/**
+ * mindlore-fts5-index — Full re-index of .mindlore/ into FTS5 database.
+ *
+ * Scans all .md files, computes SHA256 content-hash, skips unchanged files.
+ * Usage: node dist/scripts/mindlore-fts5-index.js [path-to-mindlore-dir]
+ */
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const fs_1 = __importDefault(require("fs"));
+const path_1 = __importDefault(require("path"));
+const constants_js_1 = require("./lib/constants.js");
+const { sha256, getAllMdFiles, openDatabase, parseFrontmatter, extractFtsMetadata, SQL_FTS_INSERT, } = require((0, constants_js_1.resolveHookCommon)(__dirname));
+// ── Main ───────────────────────────────────────────────────────────────
+function main() {
+    const baseDir = process.argv[2] ?? path_1.default.join(process.cwd(), '.mindlore');
+    const dbPath = path_1.default.join(baseDir, constants_js_1.DB_NAME);
+    if (!fs_1.default.existsSync(dbPath)) {
+        console.error('  Database not found. Run: npx mindlore init');
+        process.exit(1);
+    }
+    const db = openDatabase(dbPath);
+    if (!db) {
+        console.error('  better-sqlite3 not installed. Run: npm install better-sqlite3');
+        process.exit(1);
+    }
+    const getHash = db.prepare('SELECT content_hash FROM file_hashes WHERE path = ?');
+    const upsertHash = db.prepare(`
+    INSERT INTO file_hashes (path, content_hash, last_indexed)
+    VALUES (?, ?, ?)
+    ON CONFLICT(path) DO UPDATE SET
+      content_hash = excluded.content_hash,
+      last_indexed = excluded.last_indexed
+  `);
+    const deleteFts = db.prepare('DELETE FROM mindlore_fts WHERE path = ?');
+    const insertFts = db.prepare(SQL_FTS_INSERT);
+    const mdFiles = getAllMdFiles(baseDir);
+    let indexed = 0;
+    let skipped = 0;
+    let errors = 0;
+    const now = new Date().toISOString();
+    const transaction = db.transaction(() => {
+        for (const filePath of mdFiles) {
+            try {
+                const content = fs_1.default.readFileSync(filePath, 'utf8').replace(/\r\n/g, '\n');
+                const hash = sha256(content);
+                const existing = getHash.get(filePath);
+                if (existing && existing.content_hash === hash) {
+                    skipped++;
+                    continue;
+                }
+                const { meta, body } = parseFrontmatter(content);
+                const { slug, description, type, category, title, tags, quality } = extractFtsMetadata(meta, body, filePath, baseDir);
+                deleteFts.run(filePath);
+                insertFts.run(filePath, slug, description, type, category, title, body, tags, quality);
+                upsertHash.run(filePath, hash, now);
+                indexed++;
+            }
+            catch (err) {
+                const message = err instanceof Error ? err.message : String(err);
+                console.error(`  Error indexing ${path_1.default.basename(filePath)}: ${message}`);
+                errors++;
+            }
+        }
+    });
+    transaction();
+    const allIndexed = db.prepare('SELECT path FROM file_hashes').all();
+    const existingPaths = new Set(mdFiles);
+    let removed = 0;
+    const deleteHash = db.prepare('DELETE FROM file_hashes WHERE path = ?');
+    const cleanupTransaction = db.transaction(() => {
+        for (const row of allIndexed) {
+            if (!existingPaths.has(row.path)) {
+                deleteFts.run(row.path);
+                deleteHash.run(row.path);
+                removed++;
+            }
+        }
+    });
+    cleanupTransaction();
+    db.close();
+    console.log(`\n  FTS5 Index: ${indexed} indexed, ${skipped} unchanged, ${removed} removed, ${errors} errors\n`);
+    process.exit(errors > 0 ? 1 : 0);
+}
+main();
+//# sourceMappingURL=mindlore-fts5-index.js.map

package/dist/scripts/mindlore-fts5-index.js.map

@@ -0,0 +1 @@
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package/dist/scripts/mindlore-fts5-search.d.ts

@@ -0,0 +1,10 @@
+#!/usr/bin/env node
+/**
+ * mindlore-fts5-search — Search .mindlore/ knowledge base via FTS5.
+ *
+ * Usage: node dist/scripts/mindlore-fts5-search.js "query" [path-to-mindlore-dir]
+ *
+ * Returns top 3 results ranked by BM25 with file path and snippet.
+ */
+export {};
+//# sourceMappingURL=mindlore-fts5-search.d.ts.map

package/dist/scripts/mindlore-fts5-search.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"mindlore-fts5-search.d.ts","sourceRoot":"","sources":["../../scripts/mindlore-fts5-search.ts"],"names":[],"mappings":";AAEA;;;;;;GAMG"}

package/dist/scripts/mindlore-fts5-search.js

@@ -0,0 +1,108 @@
+#!/usr/bin/env node
+"use strict";
+/**
+ * mindlore-fts5-search — Search .mindlore/ knowledge base via FTS5.
+ *
+ * Usage: node dist/scripts/mindlore-fts5-search.js "query" [path-to-mindlore-dir]
+ *
+ * Returns top 3 results ranked by BM25 with file path and snippet.
+ */
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const fs_1 = __importDefault(require("fs"));
+const path_1 = __importDefault(require("path"));
+const constants_js_1 = require("./lib/constants.js");
+const { openDatabase } = require((0, constants_js_1.resolveHookCommon)(__dirname));
+const MAX_RESULTS = 3;
+// ── Helpers ────────────────────────────────────────────────────────────
+function extractHeadings(content, maxHeadings) {
+    const lines = content.split('\n');
+    const headings = [];
+    for (const line of lines) {
+        if (line.startsWith('#')) {
+            headings.push(line.replace(/^#+\s*/, '').trim());
+            if (headings.length >= maxHeadings)
+                break;
+        }
+    }
+    return headings;
+}
+function main() {
+    const query = process.argv[2];
+    if (!query) {
+        console.error('Usage: node mindlore-fts5-search.js "query" [mindlore-dir]');
+        process.exit(1);
+    }
+    const baseDir = process.argv[3] ?? path_1.default.join(process.cwd(), '.mindlore');
+    const dbPath = path_1.default.join(baseDir, constants_js_1.DB_NAME);
+    if (!fs_1.default.existsSync(dbPath)) {
+        console.error('  Database not found. Run: npx mindlore init && npm run index');
+        process.exit(1);
+    }
+    const db = openDatabase(dbPath, { readonly: true });
+    if (!db) {
+        console.error('  better-sqlite3 not installed.');
+        process.exit(1);
+    }
+    try {
+        const sanitized = query.replace(/['"(){}[\]*:^~!]/g, ' ').trim();
+        if (!sanitized) {
+            console.log('  No valid search terms.');
+            process.exit(0);
+        }
+        const results = db
+            .prepare(`SELECT path, snippet(mindlore_fts, 1, '>>>', '<<<', '...', 40) as snippet,
+                rank
+         FROM mindlore_fts
+         WHERE mindlore_fts MATCH ?
+         ORDER BY rank
+         LIMIT ?`)
+            .all(sanitized, MAX_RESULTS);
+        if (results.length === 0) {
+            console.log(`  No results for: "${query}"`);
+            process.exit(0);
+        }
+        console.log(`\n  Mindlore Search: "${query}" (${results.length} results)\n`);
+        for (let i = 0; i < results.length; i++) {
+            const r = results[i];
+            if (!r)
+                continue;
+            const relativePath = path_1.default.relative(baseDir, r.path);
+            const fileName = path_1.default.basename(r.path, '.md');
+            let headings = [];
+            if (fs_1.default.existsSync(r.path)) {
+                const content = fs_1.default.readFileSync(r.path, 'utf8');
+                headings = extractHeadings(content, 2);
+            }
+            console.log(`  ${i + 1}. ${relativePath}`);
+            if (headings.length > 0) {
+                console.log(`     ${headings.join(' > ')}`);
+            }
+            console.log(`     ${r.snippet || fileName}`);
+            console.log('');
+        }
+    }
+    catch (err) {
+        const message = err instanceof Error ? err.message : String(err);
+        if (message.includes('fts5')) {
+            const words = query.split(/\s+/).filter((w) => w.length >= 2);
+            if (words.length > 0) {
+                console.error(`  Search syntax error. Try simpler terms: ${words.join(' ')}`);
+            }
+            else {
+                console.error(`  Search error: ${message}`);
+            }
+        }
+        else {
+            console.error(`  Error: ${message}`);
+        }
+        process.exit(1);
+    }
+    finally {
+        db.close();
+    }
+}
+main();
+//# sourceMappingURL=mindlore-fts5-search.js.map

package/dist/scripts/mindlore-fts5-search.js.map

@@ -0,0 +1 @@
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package/dist/scripts/mindlore-health-check.d.ts

@@ -0,0 +1,10 @@
+#!/usr/bin/env node
+/**
+ * mindlore-health-check — 18-point structural health check for .mindlore/
+ *
+ * Usage: node dist/scripts/mindlore-health-check.js [path-to-mindlore-dir]
+ *
+ * Exit codes: 0 = healthy, 1 = issues found
+ */
+export {};
+//# sourceMappingURL=mindlore-health-check.d.ts.map

package/dist/scripts/mindlore-health-check.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"mindlore-health-check.d.ts","sourceRoot":"","sources":["../../scripts/mindlore-health-check.ts"],"names":[],"mappings":";AAEA;;;;;;GAMG"}

package/dist/scripts/mindlore-health-check.js

@@ -0,0 +1,337 @@
+#!/usr/bin/env node
+"use strict";
+/**
+ * mindlore-health-check — 18-point structural health check for .mindlore/
+ *
+ * Usage: node dist/scripts/mindlore-health-check.js [path-to-mindlore-dir]
+ *
+ * Exit codes: 0 = healthy, 1 = issues found
+ */
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const fs_1 = __importDefault(require("fs"));
+const path_1 = __importDefault(require("path"));
+const constants_js_1 = require("./lib/constants.js");
+const { parseFrontmatter: _parseFm, getAllMdFiles: _getAllMd, } = require((0, constants_js_1.resolveHookCommon)(__dirname));
+function parseFrontmatter(content) {
+    const { meta } = _parseFm(content);
+    return Object.keys(meta).length > 0 ? meta : null;
+}
+function getAllMdFiles(dir) {
+    return _getAllMd(dir, new Set());
+}
+class HealthChecker {
+    baseDir;
+    results = [];
+    passed = 0;
+    failed = 0;
+    warnings = 0;
+    constructor(baseDir) {
+        this.baseDir = baseDir;
+    }
+    check(name, fn) {
+        try {
+            const result = fn();
+            if (result.ok) {
+                this.passed++;
+                this.results.push({ name, status: 'PASS', detail: result.detail });
+            }
+            else if (result.warn) {
+                this.warnings++;
+                this.results.push({ name, status: 'WARN', detail: result.detail });
+            }
+            else {
+                this.failed++;
+                this.results.push({ name, status: 'FAIL', detail: result.detail });
+            }
+        }
+        catch (err) {
+            this.failed++;
+            const message = err instanceof Error ? err.message : String(err);
+            this.results.push({ name, status: 'FAIL', detail: message });
+        }
+    }
+    checkDirectories() {
+        for (const dir of constants_js_1.DIRECTORIES) {
+            this.check(`Directory: ${dir}/`, () => {
+                const dirPath = path_1.default.join(this.baseDir, dir);
+                if (fs_1.default.existsSync(dirPath)) {
+                    return { ok: true, detail: 'exists' };
+                }
+                return { ok: false, detail: 'missing' };
+            });
+        }
+    }
+    checkSchema() {
+        this.check('SCHEMA.md', () => {
+            const schemaPath = path_1.default.join(this.baseDir, 'SCHEMA.md');
+            if (!fs_1.default.existsSync(schemaPath)) {
+                return { ok: false, detail: 'missing' };
+            }
+            const content = fs_1.default.readFileSync(schemaPath, 'utf8');
+            if (content.length < 100) {
+                return { ok: false, detail: 'too short (corrupted?)' };
+            }
+            if (!content.includes('## 1. Identity')) {
+                return { warn: true, detail: 'may be outdated (missing Identity section)' };
+            }
+            return { ok: true, detail: `${content.split('\n').length} lines` };
+        });
+    }
+    checkIndex() {
+        this.check('INDEX.md format', () => {
+            const indexPath = path_1.default.join(this.baseDir, 'INDEX.md');
+            if (!fs_1.default.existsSync(indexPath)) {
+                return { ok: false, detail: 'missing' };
+            }
+            const content = fs_1.default.readFileSync(indexPath, 'utf8');
+            const lines = content.trim().split('\n');
+            if (lines.length > 60) {
+                return {
+                    warn: true,
+                    detail: `${lines.length} lines (should be ~15-60, consider trimming)`,
+                };
+            }
+            return { ok: true, detail: `${lines.length} lines` };
+        });
+    }
+    checkDatabase() {
+        this.check('mindlore.db FTS5', () => {
+            const dbPath = path_1.default.join(this.baseDir, constants_js_1.DB_NAME);
+            if (!fs_1.default.existsSync(dbPath)) {
+                return { ok: false, detail: 'database missing' };
+            }
+            let Database;
+            try {
+                Database = require('better-sqlite3');
+            }
+            catch (_err) {
+                return { warn: true, detail: 'better-sqlite3 not available, cannot verify' };
+            }
+            const db = new Database(dbPath, { readonly: true });
+            try {
+                const result = db.prepare('SELECT count(*) as cnt FROM mindlore_fts').get();
+                const hashResult = db
+                    .prepare('SELECT count(*) as cnt FROM file_hashes')
+                    .get();
+                let schemaVersion = 0;
+                try {
+                    db.prepare('SELECT tags, quality FROM mindlore_fts LIMIT 0').run();
+                    schemaVersion = 9;
+                }
+                catch (_err) {
+                    try {
+                        db.prepare('SELECT slug, description, category, title FROM mindlore_fts LIMIT 0').run();
+                        schemaVersion = 7;
+                    }
+                    catch (_err2) {
+                        schemaVersion = 2;
+                    }
+                }
+                if (schemaVersion < 9) {
+                    return {
+                        warn: true,
+                        detail: `${result.cnt} indexed, ${hashResult.cnt} hashes — ${schemaVersion}-col schema (run: npx mindlore init to upgrade to 9-col)`,
+                    };
+                }
+                return {
+                    ok: true,
+                    detail: `${result.cnt} indexed, ${hashResult.cnt} hashes, 9-col schema`,
+                };
+            }
+            catch (err) {
+                const message = err instanceof Error ? err.message : String(err);
+                return { ok: false, detail: `FTS5 error: ${message}` };
+            }
+            finally {
+                db.close();
+            }
+        });
+    }
+    checkOrphans() {
+        this.check('Orphan files', () => {
+            const dbPath = path_1.default.join(this.baseDir, constants_js_1.DB_NAME);
+            if (!fs_1.default.existsSync(dbPath)) {
+                return { warn: true, detail: 'no database, cannot check' };
+            }
+            let Database;
+            try {
+                Database = require('better-sqlite3');
+            }
+            catch (_err) {
+                return { warn: true, detail: 'better-sqlite3 not available' };
+            }
+            const mdFiles = getAllMdFiles(this.baseDir).filter(constants_js_1.isContentFile);
+            const db = new Database(dbPath, { readonly: true });
+            try {
+                const indexed = new Set();
+                const rows = db.prepare('SELECT path FROM file_hashes').all();
+                for (const row of rows) {
+                    indexed.add(path_1.default.resolve(row.path));
+                }
+                const orphans = mdFiles.filter((f) => !indexed.has(path_1.default.resolve(f)));
+                if (orphans.length === 0) {
+                    return { ok: true, detail: 'no orphans' };
+                }
+                if (orphans.length <= 3) {
+                    return {
+                        warn: true,
+                        detail: `${orphans.length} unindexed: ${orphans.map((f) => path_1.default.basename(f)).join(', ')}`,
+                    };
+                }
+                return {
+                    ok: false,
+                    detail: `${orphans.length} unindexed files — run: npm run index`,
+                };
+            }
+            finally {
+                db.close();
+            }
+        });
+    }
+    checkFrontmatter() {
+        this.check('Frontmatter: slug + type', () => {
+            const mdFiles = getAllMdFiles(this.baseDir).filter(constants_js_1.isContentFile);
+            let missingSlug = 0;
+            let missingType = 0;
+            let wrongDir = 0;
+            for (const file of mdFiles) {
+                const content = fs_1.default.readFileSync(file, 'utf8').replace(/\r\n/g, '\n');
+                const fm = parseFrontmatter(content);
+                if (!fm) {
+                    missingSlug++;
+                    missingType++;
+                    continue;
+                }
+                if (!fm.slug)
+                    missingSlug++;
+                if (!fm.type) {
+                    missingType++;
+                    continue;
+                }
+                const expectedDir = constants_js_1.TYPE_TO_DIR[fm.type];
+                if (expectedDir) {
+                    const parentDir = path_1.default.basename(path_1.default.dirname(file));
+                    if (parentDir !== expectedDir) {
+                        wrongDir++;
+                    }
+                }
+            }
+            const issues = [];
+            if (missingSlug > 0)
+                issues.push(`${missingSlug} missing slug`);
+            if (missingType > 0)
+                issues.push(`${missingType} missing type`);
+            if (wrongDir > 0)
+                issues.push(`${wrongDir} type-dir mismatch`);
+            if (issues.length === 0) {
+                return {
+                    ok: true,
+                    detail: `${mdFiles.length} files validated`,
+                };
+            }
+            if (wrongDir > 0) {
+                return { ok: false, detail: issues.join(', ') };
+            }
+            return { warn: true, detail: issues.join(', ') };
+        });
+    }
+    checkStaleDeltas() {
+        this.check('Stale deltas', () => {
+            const diaryDir = path_1.default.join(this.baseDir, 'diary');
+            if (!fs_1.default.existsSync(diaryDir))
+                return { ok: true, detail: 'no diary dir' };
+            const now = Date.now();
+            const thirtyDays = 30 * 24 * 60 * 60 * 1000;
+            let stale = 0;
+            const files = fs_1.default.readdirSync(diaryDir).filter((f) => f.startsWith('delta-') && f.endsWith('.md'));
+            for (const file of files) {
+                const fullPath = path_1.default.join(diaryDir, file);
+                const content = fs_1.default.readFileSync(fullPath, 'utf8').replace(/\r\n/g, '\n');
+                const fm = parseFrontmatter(content);
+                if (fm && fm.archived === 'true')
+                    continue;
+                const stat = fs_1.default.statSync(fullPath);
+                if (now - stat.mtimeMs > thirtyDays)
+                    stale++;
+            }
+            if (stale === 0)
+                return { ok: true, detail: `${files.length} deltas, none stale` };
+            return { warn: true, detail: `${stale} deltas older than 30 days without archived flag — run /mindlore-log reflect` };
+        });
+    }
+    checkConflictingAnalyses() {
+        this.check('Conflicting analyses', () => {
+            const analysesDir = path_1.default.join(this.baseDir, 'analyses');
+            if (!fs_1.default.existsSync(analysesDir))
+                return { ok: true, detail: 'no analyses dir' };
+            const files = fs_1.default.readdirSync(analysesDir).filter((f) => f.endsWith('.md'));
+            if (files.length < 2)
+                return { ok: true, detail: `${files.length} analyses, no conflict possible` };
+            const tagMap = {};
+            for (const file of files) {
+                const content = fs_1.default.readFileSync(path_1.default.join(analysesDir, file), 'utf8').replace(/\r\n/g, '\n');
+                const fm = parseFrontmatter(content);
+                if (!fm?.tags || !fm.confidence)
+                    continue;
+                const tags = Array.isArray(fm.tags) ? fm.tags : String(fm.tags).split(',').map((t) => t.trim());
+                for (const tag of tags) {
+                    if (!tagMap[tag])
+                        tagMap[tag] = [];
+                    const entries = tagMap[tag];
+                    if (entries)
+                        entries.push({ file, confidence: String(fm.confidence) });
+                }
+            }
+            const conflicts = [];
+            for (const [tag, entries] of Object.entries(tagMap)) {
+                if (!entries || entries.length < 2)
+                    continue;
+                const confidences = new Set(entries.map((e) => e.confidence));
+                if (confidences.size > 1) {
+                    conflicts.push(`${tag}: ${entries.map((e) => `${e.file}(${e.confidence})`).join(' vs ')}`);
+                }
+            }
+            if (conflicts.length === 0)
+                return { ok: true, detail: `${files.length} analyses, no conflicts` };
+            return { warn: true, detail: `${conflicts.length} tag conflicts: ${conflicts.slice(0, 2).join('; ')}` };
+        });
+    }
+    run() {
+        this.checkDirectories();
+        this.checkSchema();
+        this.checkIndex();
+        this.checkDatabase();
+        this.checkOrphans();
+        this.checkFrontmatter();
+        this.checkStaleDeltas();
+        this.checkConflictingAnalyses();
+        return this;
+    }
+    report() {
+        console.log('\n  Mindlore Health Check\n');
+        for (const r of this.results) {
+            const icon = r.status === 'PASS' ? '+' : r.status === 'WARN' ? '~' : '-';
+            console.log(`  [${icon}] ${r.name}: ${r.detail}`);
+        }
+        const total = this.passed + this.failed + this.warnings;
+        console.log(`\n  Score: ${this.passed}/${total} passed, ${this.warnings} warnings, ${this.failed} failed\n`);
+        return this.failed === 0;
+    }
+}
+// ── Main ───────────────────────────────────────────────────────────────
+function main() {
+    const baseDir = process.argv[2] ?? path_1.default.join(process.cwd(), '.mindlore');
+    if (!fs_1.default.existsSync(baseDir)) {
+        console.error(`  .mindlore/ not found at: ${baseDir}`);
+        console.error('  Run: npx mindlore init');
+        process.exit(1);
+    }
+    const checker = new HealthChecker(baseDir);
+    const healthy = checker.run().report();
+    process.exit(healthy ? 0 : 1);
+}
+main();
+//# sourceMappingURL=mindlore-health-check.js.map

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package/dist/scripts/uninstall.d.ts

@@ -0,0 +1,10 @@
+#!/usr/bin/env node
+/**
+ * mindlore uninstall — Remove Mindlore hooks, skills, and optionally project data.
+ *
+ * Usage: npx mindlore uninstall [--all]
+ *
+ * --all: also remove .mindlore/ project data (without flag, only hooks + skills)
+ */
+export {};
+//# sourceMappingURL=uninstall.d.ts.map

package/dist/scripts/uninstall.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"uninstall.d.ts","sourceRoot":"","sources":["../../scripts/uninstall.ts"],"names":[],"mappings":";AAEA;;;;;;GAMG"}