mindlink 2.0.0 → 2.0.2

package/dist/cli.js

@@ -6,7 +6,7 @@ import { Command as Command20 } from "commander";
 import chalk20 from "chalk";
 
 // src/utils/version.ts
-var VERSION = "2.0.0";
+var VERSION = "2.0.2";
 
 // src/commands/init.ts
 import { Command } from "commander";
@@ -371,12 +371,19 @@ Examples:
             if (!existsSync2(hookDest)) {
               mkdirSync2(dirname2(hookDest), { recursive: true });
               const settings = JSON.parse(readFileSync2(join3(HOOKS_TEMPLATES_DIR, "claude-settings.json"), "utf8"));
-              settings.mcpServers = {
-                mindlink: { command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
-              };
               writeFileSync2(hookDest, JSON.stringify(settings, null, 2));
               restored.push(".claude/settings.json");
             }
+            const mcpJsonDest = join3(projectPath, ".mcp.json");
+            if (!existsSync2(mcpJsonDest)) {
+              const mcpJson = {
+                mcpServers: {
+                  mindlink: { type: "stdio", command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
+                }
+              };
+              writeFileSync2(mcpJsonDest, JSON.stringify(mcpJson, null, 2));
+              restored.push(".mcp.json");
+            }
           }
           const configPath = join3(brainDir, "config.json");
           if (!existsSync2(configPath)) {
@@ -580,18 +587,25 @@ Examples:
       if (!existsSync2(hookDest)) {
         mkdirSync2(dirname2(hookDest), { recursive: true });
         const settings = JSON.parse(readFileSync2(join3(HOOKS_TEMPLATES_DIR, "claude-settings.json"), "utf8"));
-        settings.mcpServers = {
-          mindlink: { command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
-        };
         writeFileSync2(hookDest, JSON.stringify(settings, null, 2));
-        created.push(`.claude/settings.json${" ".repeat(14)} ${chalk2.dim("Claude Code hooks + MCP server")}`);
+        created.push(`.claude/settings.json${" ".repeat(14)} ${chalk2.dim("Claude Code hooks")}`);
+      }
+      const mcpJsonDest = join3(projectPath, ".mcp.json");
+      if (!existsSync2(mcpJsonDest)) {
+        const mcpJson = {
+          mcpServers: {
+            mindlink: { type: "stdio", command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
+          }
+        };
+        writeFileSync2(mcpJsonDest, JSON.stringify(mcpJson, null, 2));
+        created.push(`.mcp.json${" ".repeat(24)} ${chalk2.dim("Claude Code MCP server")}`);
       }
     }
     if (selectedAgents.includes("cursor")) {
       const cursorMcpDest = join3(projectPath, ".cursor", "mcp.json");
       if (!existsSync2(cursorMcpDest)) {
         mkdirSync2(join3(projectPath, ".cursor"), { recursive: true });
-        const cursorMcp = { mcpServers: { mindlink: { command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } } } };
+        const cursorMcp = { mcpServers: { mindlink: { type: "stdio", command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } } } };
         writeFileSync2(cursorMcpDest, JSON.stringify(cursorMcp, null, 2));
         created.push(`.cursor/mcp.json${" ".repeat(20)} ${chalk2.dim("Cursor MCP server")}`);
       }
@@ -609,7 +623,7 @@ Examples:
       const copilotMcpDest = join3(projectPath, ".vscode", "mcp.json");
       if (!existsSync2(copilotMcpDest)) {
         mkdirSync2(join3(projectPath, ".vscode"), { recursive: true });
-        const copilotMcp = { mcpServers: { mindlink: { command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } } } };
+        const copilotMcp = { servers: { mindlink: { command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } } } };
         writeFileSync2(copilotMcpDest, JSON.stringify(copilotMcp, null, 2));
         created.push(`.vscode/mcp.json${" ".repeat(19)} ${chalk2.dim("GitHub Copilot MCP server")}`);
       }
@@ -1551,20 +1565,35 @@ Examples:
             } catch {
             }
           }
+          const { mcpServers: _removed, ...existingWithoutMcp } = existing;
+          void _removed;
           const merged = {
-            ...template,
-            ...existing,
-            // Always refresh hooks and permissions from template
+            ...existingWithoutMcp,
             hooks: template.hooks,
-            permissions: template.permissions,
-            // Merge mcpServers: keep user's other servers, update mindlink entry
+            permissions: template.permissions
+          };
+          writeFileSync6(hookDest, JSON.stringify(merged, null, 2));
+          refreshed.push(".claude/settings.json");
+        } catch {
+        }
+        const mcpJsonDest = join10(projectPath, ".mcp.json");
+        try {
+          let existing = {};
+          if (existsSync9(mcpJsonDest)) {
+            try {
+              existing = JSON.parse(readFileSync9(mcpJsonDest, "utf8"));
+            } catch {
+            }
+          }
+          const merged = {
+            ...existing,
             mcpServers: {
               ...typeof existing.mcpServers === "object" && existing.mcpServers !== null ? existing.mcpServers : {},
-              mindlink: { command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
+              mindlink: { type: "stdio", command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
             }
           };
-          writeFileSync6(hookDest, JSON.stringify(merged, null, 2));
-          refreshed.push(".claude/settings.json");
+          writeFileSync6(mcpJsonDest, JSON.stringify(merged, null, 2));
+          refreshed.push(".mcp.json");
         } catch {
         }
       }
@@ -1583,7 +1612,7 @@ Examples:
             ...existing,
             mcpServers: {
               ...typeof existing.mcpServers === "object" && existing.mcpServers !== null ? existing.mcpServers : {},
-              mindlink: { command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
+              mindlink: { type: "stdio", command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
             }
           };
           writeFileSync6(cursorMcpDest, JSON.stringify(merged, null, 2));
@@ -1614,8 +1643,8 @@ Examples:
           }
           const merged = {
             ...existing,
-            mcpServers: {
-              ...typeof existing.mcpServers === "object" && existing.mcpServers !== null ? existing.mcpServers : {},
+            servers: {
+              ...typeof existing.servers === "object" && existing.servers !== null ? existing.servers : {},
               mindlink: { command: "mindlink", args: ["mcp"], env: { MINDLINK_PROJECT_PATH: projectPath } }
             }
           };