millhouse 0.3.9 → 1.0.1

package/dist/core/orchestrator.d.ts

@@ -1,7 +1,6 @@
-import type { Config, GitHubIssue, AnalyzedIssue, RunState } from '../types.js';
+import type { GitHubIssue, AnalyzedIssue, RunState } from '../types.js';
 import type { JsonStore } from '../storage/json-store.js';
 import type { GitHubClient } from '../github/client.js';
-import type { LabelManager } from '../github/label-manager.js';
 import type { IssueDiscoverer } from '../github/issue-discoverer.js';
 import type { IssueAnalyzer } from '../analysis/issue-analyzer.js';
 import type { GraphBuilder } from '../analysis/graph-builder.js';
@@ -10,29 +9,23 @@ import type { ClaudeRunner } from '../execution/claude-runner.js';
 import type { Scheduler } from './scheduler.js';
 import type { ProgressDisplay } from '../cli/progress-display.js';
 interface OrchestratorOptions {
-    config: Config;
     store: JsonStore;
     graphBuilder: GraphBuilder;
     worktreeManager: WorktreeManager;
     claudeRunner: ClaudeRunner;
     scheduler: Scheduler;
     githubClient?: GitHubClient;
-    labelManager?: LabelManager;
     issueDiscoverer?: IssueDiscoverer;
     issueAnalyzer?: IssueAnalyzer;
     progressDisplay?: ProgressDisplay;
-    scanProject?: boolean;
-    dangerouslySkipPermissions?: boolean;
 }
 export declare class Orchestrator {
-    private config;
     private store;
     private graphBuilder;
     private worktreeManager;
     private claudeRunner;
     private scheduler;
     private githubClient?;
-    private labelManager?;
     private issueDiscoverer?;
     private issueAnalyzer?;
     private progressDisplay?;
@@ -40,8 +33,6 @@ export declare class Orchestrator {
     private graph;
     private isShuttingDown;
     private originalBranch;
-    private shouldScanProject;
-    private dangerouslySkipPermissions;
     constructor(options: OrchestratorOptions);
     private setupShutdownHandlers;
     /**
@@ -54,6 +45,12 @@ export declare class Orchestrator {
      * Only available in GitHub mode.
      */
     analyzeIssues(issues: GitHubIssue[]): Promise<AnalyzedIssue[]>;
+    /**
+     * Check that the working directory is clean before starting a run.
+     * Only allows files that are gitignored - all other changes must be committed or stashed.
+     * Special case: if only CLAUDE.md is untracked, auto-commit it.
+     */
+    private checkWorkingDirectoryClean;
     /**
      * Run the full orchestration pipeline.
      */
@@ -75,9 +72,11 @@ export declare class Orchestrator {
      */
     private updateTaskStatus;
     /**
-     * Create the final pull request.
+     * Handle issues marked as noWorkNeeded (index/meta issues).
+     * Creates an empty commit to close the issue when merged.
+     * Uses a worktree to avoid polluting the main working directory.
      */
-    private createFinalPR;
+    private handleNoWorkNeededIssue;
 }
 export {};
 //# sourceMappingURL=orchestrator.d.ts.map

package/dist/core/orchestrator.d.ts.map

@@ -1 +1 @@
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package/dist/core/orchestrator.js

@@ -1,17 +1,14 @@
 import chalk from 'chalk';
 import { promises as fs } from 'node:fs';
 import path from 'node:path';
-import { scanProject } from '../execution/project-scanner.js';
 export class Orchestrator {
-    config;
     store;
     graphBuilder;
     worktreeManager;
     claudeRunner;
     scheduler;
-    // GitHub-specific (optional for local mode)
+    // GitHub-specific (optional for load command)
     githubClient;
-    labelManager;
     issueDiscoverer;
     issueAnalyzer;
     progressDisplay;
@@ -19,10 +16,7 @@ export class Orchestrator {
     graph = null;
     isShuttingDown = false;
     originalBranch = null;
-    shouldScanProject;
-    dangerouslySkipPermissions;
     constructor(options) {
-        this.config = options.config;
         this.store = options.store;
         this.graphBuilder = options.graphBuilder;
         this.worktreeManager = options.worktreeManager;
@@ -30,13 +24,9 @@ export class Orchestrator {
         this.scheduler = options.scheduler;
         // GitHub-specific
         this.githubClient = options.githubClient;
-        this.labelManager = options.labelManager;
         this.issueDiscoverer = options.issueDiscoverer;
         this.issueAnalyzer = options.issueAnalyzer;
         this.progressDisplay = options.progressDisplay;
-        // Project scanning
-        this.shouldScanProject = options.scanProject ?? true;
-        this.dangerouslySkipPermissions = options.dangerouslySkipPermissions ?? false;
         // Handle graceful shutdown
         this.setupShutdownHandlers();
     }
@@ -80,43 +70,101 @@ export class Orchestrator {
         if (!this.issueAnalyzer) {
             throw new Error('analyzeIssues is only available in GitHub mode');
         }
-        return this.issueAnalyzer.analyzeIssues(issues);
+        const result = await this.issueAnalyzer.analyzeIssues(issues);
+        return result.issues;
     }
     /**
-     * Run the full orchestration pipeline.
+     * Check that the working directory is clean before starting a run.
+     * Only allows files that are gitignored - all other changes must be committed or stashed.
+     * Special case: if only CLAUDE.md is untracked, auto-commit it.
      */
-    async run(analyzedIssues) {
-        // Save original branch to restore later
-        this.originalBranch = await this.worktreeManager.getCurrentBranch();
-        // Check for existing CLAUDE.md or run /init
-        if (this.shouldScanProject) {
-            const claudeMdPath = path.join(process.cwd(), 'CLAUDE.md');
+    async checkWorkingDirectoryClean() {
+        const { execSync } = await import('node:child_process');
+        const isGitIgnored = (filePath) => {
             try {
-                await fs.access(claudeMdPath);
-                // CLAUDE.md exists - workers will pick it up automatically from worktree
-                console.log(chalk.blue('\n📂 Using existing CLAUDE.md for project context'));
+                // git check-ignore exits 0 if ignored, 1 if not ignored
+                execSync(`git check-ignore -q "${filePath}"`, {
+                    cwd: process.cwd(),
+                    stdio: 'pipe',
+                });
+                return true;
             }
             catch {
-                // No CLAUDE.md - run /init to create one
-                console.log(chalk.blue('\n📂 No CLAUDE.md found, running /init...'));
-                const scanResult = await scanProject(process.cwd(), {
-                    dangerouslySkipPermissions: this.dangerouslySkipPermissions,
-                    onLog: (message) => {
-                        console.log(chalk.gray(`   ${message}`));
-                    },
+                return false;
+            }
+        };
+        try {
+            const status = execSync('git status --porcelain', {
+                cwd: process.cwd(),
+                encoding: 'utf-8',
+            }).trim();
+            if (status) {
+                const lines = status.split('\n');
+                // Filter out gitignored files
+                const unexpectedLines = lines.filter(line => {
+                    // Extract the file path (status is first 2 chars, then space, then path)
+                    const filePath = line.slice(3);
+                    return !isGitIgnored(filePath);
                 });
-                if (scanResult.success) {
-                    console.log(chalk.green('   ✓ CLAUDE.md created'));
-                }
-                else {
-                    console.log(chalk.yellow(`   ⚠ /init failed: ${scanResult.error}`));
-                    // Continue without - it's not critical
+                if (unexpectedLines.length > 0) {
+                    // Special case: if only CLAUDE.md is untracked, auto-commit it
+                    if (unexpectedLines.length === 1 && unexpectedLines[0] === '?? CLAUDE.md') {
+                        console.log(chalk.blue('   Auto-committing CLAUDE.md...'));
+                        execSync('git add CLAUDE.md && git commit -m "chore: add CLAUDE.md"', {
+                            cwd: process.cwd(),
+                            stdio: 'pipe',
+                        });
+                        return;
+                    }
+                    const untracked = unexpectedLines.filter(l => l.startsWith('??'));
+                    const modified = unexpectedLines.filter(l => !l.startsWith('??'));
+                    const issues = [];
+                    if (modified.length > 0) {
+                        issues.push(`${modified.length} uncommitted change(s)`);
+                    }
+                    if (untracked.length > 0) {
+                        issues.push(`${untracked.length} untracked file(s)`);
+                    }
+                    console.log(chalk.yellow(`\n⚠ Working directory is not clean: ${issues.join(', ')}`));
+                    console.log(chalk.gray('  These files may cause merge conflicts at the end of the run:'));
+                    for (const line of unexpectedLines.slice(0, 10)) {
+                        console.log(chalk.gray(`    ${line}`));
+                    }
+                    if (unexpectedLines.length > 10) {
+                        console.log(chalk.gray(`    ... and ${unexpectedLines.length - 10} more`));
+                    }
+                    console.log(chalk.gray('\n  Commit or stash these changes before running.\n'));
+                    throw new Error('Working directory is not clean. Commit or stash changes before running.');
                 }
             }
         }
+        catch (error) {
+            if (error instanceof Error && error.message.includes('Working directory is not clean')) {
+                throw error;
+            }
+            // If git status fails for some other reason, continue
+        }
+    }
+    /**
+     * Run the full orchestration pipeline.
+     */
+    async run(analyzedIssues) {
+        // Save original branch to restore later
+        this.originalBranch = await this.worktreeManager.getCurrentBranch();
+        // Check working directory is clean (allowing expected files)
+        await this.checkWorkingDirectoryClean();
+        // Check for CLAUDE.md
+        const claudeMdPath = path.join(process.cwd(), 'CLAUDE.md');
+        try {
+            await fs.access(claudeMdPath);
+        }
+        catch {
+            console.log(chalk.yellow('\n⚠ No CLAUDE.md found.'));
+            console.log(chalk.gray('  CLAUDE.md is highly recommended for best results.'));
+            console.log(chalk.gray('  Run /init inside Claude Code to create it.'));
+        }
         // Create run state
         const runId = this.store.generateRunId();
-        const baseBranch = this.config.execution.baseBranch;
         // Build dependency graph
         this.graph = this.graphBuilder.build(analyzedIssues);
         // Check for cycles
@@ -124,9 +172,9 @@ export class Orchestrator {
             const cycles = this.graph.getCycles();
             throw new Error(`Circular dependencies detected: ${cycles.map(c => c.map(n => `#${n}`).join(' → ')).join('; ')}`);
         }
-        // Create run branch
+        // Create run branch from current branch
         console.log(chalk.blue(`   Creating run branch: millhouse/run-${runId}`));
-        const runBranch = await this.worktreeManager.createRunBranch(runId, baseBranch);
+        const runBranch = await this.worktreeManager.createRunBranch(runId, this.originalBranch);
         // Initialize run state
         this.runState = {
             id: runId,
@@ -134,7 +182,7 @@ export class Orchestrator {
             updatedAt: new Date().toISOString(),
             status: 'running',
             mode: this.githubClient ? 'github' : 'plan',
-            baseBranch,
+            baseBranch: this.originalBranch,
             runBranch,
             issues: analyzedIssues,
             tasks: analyzedIssues.map(issue => ({
@@ -145,11 +193,6 @@ export class Orchestrator {
             failedIssues: [],
         };
         await this.store.saveRun(this.runState);
-        // GitHub-specific: manage labels
-        if (this.labelManager) {
-            await this.labelManager.ensureLabelsExist();
-            await this.labelManager.setStatusBatch(analyzedIssues.map(i => i.number), 'queued');
-        }
         // Initialize progress display
         if (this.progressDisplay) {
             this.progressDisplay.initialize(analyzedIssues);
@@ -175,6 +218,8 @@ export class Orchestrator {
     async resume(runState) {
         // Save original branch to restore later
         this.originalBranch = await this.worktreeManager.getCurrentBranch();
+        // Check working directory is clean (allowing expected files)
+        await this.checkWorkingDirectoryClean();
         this.runState = runState;
         // Rebuild graph from issues
         this.graph = this.graphBuilder.build(runState.issues);
@@ -221,6 +266,10 @@ export class Orchestrator {
             if (!issue) {
                 return { success: false, commits: [], error: 'Issue not found' };
             }
+            // Handle noWorkNeeded issues - just create a closing commit
+            if (issue.noWorkNeeded) {
+                return await this.handleNoWorkNeededIssue(issue, runId, runBranch);
+            }
             try {
                 // Create worktree
                 if (this.progressDisplay) {
@@ -306,35 +355,16 @@ export class Orchestrator {
         this.runState.completedIssues = completed;
         this.runState.failedIssues = failed;
         this.runState.updatedAt = new Date().toISOString();
-        // Create PR if all completed (GitHub mode only)
+        // Merge run branch into current branch if any items completed
         if (failed.length === 0 && completed.length > 0) {
-            if (this.githubClient) {
-                try {
-                    // Push run branch
-                    console.log(chalk.blue('   Pushing changes...'));
-                    await this.worktreeManager.pushRunBranch(runBranch);
-                    // Create PR
-                    console.log(chalk.blue('   Creating pull request...'));
-                    const prUrl = await this.createFinalPR(runId, runBranch, issues, completed);
-                    this.runState.pullRequestUrl = prUrl;
-                    this.runState.status = 'completed';
-                }
-                catch (error) {
-                    this.runState.error = error instanceof Error ? error.message : String(error);
-                    this.runState.status = 'failed';
-                }
+            try {
+                console.log(chalk.blue('   Merging changes into current branch...'));
+                await this.worktreeManager.mergeRunBranch(runBranch, this.originalBranch);
+                this.runState.status = 'completed';
             }
-            else {
-                // Local mode - merge run branch into original branch
-                try {
-                    console.log(chalk.blue('   Merging changes into current branch...'));
-                    await this.worktreeManager.mergeRunBranch(runBranch, this.originalBranch);
-                    this.runState.status = 'completed';
-                }
-                catch (error) {
-                    this.runState.error = error instanceof Error ? error.message : String(error);
-                    this.runState.status = 'failed';
-                }
+            catch (error) {
+                this.runState.error = error instanceof Error ? error.message : String(error);
+                this.runState.status = 'failed';
             }
         }
         else if (failed.length > 0) {
@@ -361,9 +391,6 @@ export class Orchestrator {
                 else {
                     console.log(chalk.cyan(`   ▶ Started: #${event.issueNumber}`));
                 }
-                if (this.labelManager) {
-                    await this.labelManager.markInProgress(event.issueNumber);
-                }
                 this.updateTaskStatus(event.issueNumber, 'in-progress');
                 break;
             case 'task-completed':
@@ -373,9 +400,6 @@ export class Orchestrator {
                 else {
                     console.log(chalk.green(`   ✓ Completed: #${event.issueNumber}`));
                 }
-                if (this.labelManager) {
-                    await this.labelManager.markDone(event.issueNumber);
-                }
                 this.updateTaskStatus(event.issueNumber, 'completed', event.commits);
                 break;
             case 'task-failed':
@@ -385,12 +409,6 @@ export class Orchestrator {
                 else {
                     console.log(chalk.red(`   ✗ Failed: #${event.issueNumber} - ${event.error}`));
                 }
-                if (this.labelManager) {
-                    await this.labelManager.markFailed(event.issueNumber);
-                }
-                if (this.githubClient) {
-                    await this.githubClient.addComment(event.issueNumber, `❌ Millhouse failed to implement this issue:\n\n\`\`\`\n${event.error}\n\`\`\``);
-                }
                 this.updateTaskStatus(event.issueNumber, 'failed', undefined, event.error);
                 break;
             case 'tasks-unblocked':
@@ -435,37 +453,56 @@ export class Orchestrator {
         }
     }
     /**
-     * Create the final pull request.
+     * Handle issues marked as noWorkNeeded (index/meta issues).
+     * Creates an empty commit to close the issue when merged.
+     * Uses a worktree to avoid polluting the main working directory.
      */
-    async createFinalPR(runId, runBranch, issues, completedIssues) {
-        const completedSet = new Set(completedIssues);
-        const completed = issues.filter(i => completedSet.has(i.number));
-        const title = completed.length === 1
-            ? `Fix #${completed[0].number}: ${completed[0].title}`
-            : `Millhouse: Implement ${completed.length} issues`;
-        const issueList = completed
-            .map(i => `- Fixes #${i.number}: ${i.title}`)
-            .join('\n');
-        const body = `## Summary
-
-This PR implements the following issues:
-
-${issueList}
-
-## Details
-
-Run ID: \`${runId}\`
-Branch: \`${runBranch}\`
-
----
-🤖 Generated by [Millhouse](https://github.com/dave/millhouse)`;
-        return this.githubClient.createPullRequest({
-            title,
-            body,
-            head: runBranch,
-            base: this.config.execution.baseBranch,
-            draft: this.config.pullRequests.createAsDraft,
-        });
+    async handleNoWorkNeededIssue(issue, runId, runBranch) {
+        const issueNumber = issue.number;
+        const githubIssueNumber = issue.githubIssueNumber || issueNumber;
+        if (this.progressDisplay) {
+            this.progressDisplay.logDetailed(issueNumber, 'No work needed - creating closing commit...');
+        }
+        else {
+            console.log(chalk.blue(`   #${issueNumber}: No work needed - creating closing commit...`));
+        }
+        try {
+            // Create worktree on its own branch (forked from run branch)
+            const worktree = await this.worktreeManager.createWorktree(runId, issueNumber, runBranch);
+            await this.store.saveWorktree(worktree);
+            // Create an empty commit with the closing message
+            const commitMessage = `chore: close #${githubIssueNumber} (no work needed)\n\nThis is a tracking/index issue that requires no code changes.\n\nFixes #${githubIssueNumber}`;
+            const { execSync } = await import('node:child_process');
+            execSync(`git commit --allow-empty -m "${commitMessage.replace(/"/g, '\\"')}"`, {
+                cwd: worktree.path,
+                stdio: 'pipe',
+            });
+            // Get the commit hash
+            const commitHash = execSync('git rev-parse HEAD', {
+                cwd: worktree.path,
+                encoding: 'utf-8',
+            }).trim();
+            // Update the run branch to include this commit using git update-ref
+            // This avoids checking out in the main working directory
+            execSync(`git fetch "${worktree.path}" HEAD:${runBranch}`, {
+                cwd: process.cwd(),
+                stdio: 'pipe',
+            });
+            // Write MILLHOUSE_MERGE_COMMIT for consistency
+            const mergeCommitPath = path.join(worktree.path, 'MILLHOUSE_MERGE_COMMIT');
+            await fs.writeFile(mergeCommitPath, commitHash);
+            // Clean up
+            await this.worktreeManager.removeWorktree(worktree.path, worktree.branch);
+            await this.store.removeWorktree(worktree.path);
+            return { success: true, commits: [commitHash] };
+        }
+        catch (error) {
+            return {
+                success: false,
+                commits: [],
+                error: error instanceof Error ? error.message : String(error),
+            };
+        }
     }
 }
 //# sourceMappingURL=orchestrator.js.map

package/dist/core/orchestrator.js.map

@@ -1 +1 @@
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package/dist/core/scheduler.d.ts

@@ -18,6 +18,7 @@ export declare class Scheduler extends EventEmitter {
     private failed;
     private running;
     private blocked;
+    private aborted;
     constructor(options: SchedulerOptions);
     /**
      * Initialize the scheduler with a dependency graph.
@@ -27,12 +28,16 @@ export declare class Scheduler extends EventEmitter {
      * Get all tasks that are ready to run (dependencies satisfied, not running).
      */
     getReadyTasks(): number[];
+    /**
+     * Check if a task is blocked by a failed dependency (directly or transitively).
+     */
+    private isBlockedByFailure;
     /**
      * Get the number of available slots for new tasks.
      */
     getAvailableSlots(): number;
     /**
-     * Check if all tasks are complete (or failed if continueOnError is false).
+     * Check if all tasks are complete (or blocked by failures, or aborted).
      */
     isComplete(): boolean;
     /**

package/dist/core/scheduler.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"scheduler.d.ts","sourceRoot":"","sources":["../../src/core/scheduler.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAC3C,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,8BAA8B,CAAC;AACpE,OAAO,KAAK,EAAkB,UAAU,EAAE,MAAM,aAAa,CAAC;AAE9D,UAAU,gBAAgB;IACxB,WAAW,EAAE,MAAM,CAAC;IACpB,eAAe,EAAE,OAAO,CAAC;CAC1B;AAOD,KAAK,YAAY,GAAG,CAAC,WAAW,EAAE,MAAM,KAAK,OAAO,CAAC;IAAE,OAAO,EAAE,OAAO,CAAC;IAAC,OAAO,EAAE,MAAM,EAAE,CAAC;IAAC,KAAK,CAAC,EAAE,MAAM,CAAA;CAAE,CAAC,CAAC;AAE9G,qBAAa,SAAU,SAAQ,YAAY;IACzC,OAAO,CAAC,QAAQ,CAAC,WAAW,CAAS;IACrC,OAAO,CAAC,QAAQ,CAAC,eAAe,CAAU;IAE1C,OAAO,CAAC,KAAK,CAAgC;IAC7C,OAAO,CAAC,SAAS,CAA0B;IAC3C,OAAO,CAAC,MAAM,CAA0B;IACxC,OAAO,CAAC,OAAO,CAAyC;IACxD,OAAO,CAAC,OAAO,CAA0B;IACzC,OAAO,CAAC,OAAO,CAAkB;gBAErB,OAAO,EAAE,gBAAgB;IAMrC;;OAEG;IACH,UAAU,CAAC,KAAK,EAAE,eAAe,EAAE,SAAS,GAAE,MAAM,EAAO,EAAE,MAAM,GAAE,MAAM,EAAO,GAAG,IAAI;IAsBzF;;OAEG;IACH,aAAa,IAAI,MAAM,EAAE;IAsBzB;;OAEG;IACH,OAAO,CAAC,kBAAkB;IAyB1B;;OAEG;IACH,iBAAiB,IAAI,MAAM;IAI3B;;OAEG;IACH,UAAU,IAAI,OAAO;IA+BrB;;;OAGG;IACG,GAAG,CAAC,QAAQ,EAAE,YAAY,GAAG,OAAO,CAAC;QAAE,SAAS,EAAE,MAAM,EAAE,CAAC;QAAC,MAAM,EAAE,MAAM,EAAE,CAAA;KAAE,CAAC;IAgCrF;;OAEG;IACH,OAAO,CAAC,SAAS;IAoBjB;;OAEG;IACH,OAAO,CAAC,kBAAkB;IAkC1B;;OAEG;IACH,OAAO,CAAC,mBAAmB;IAkB3B;;OAEG;YACW,UAAU;IAaxB;;OAEG;IACH,eAAe,IAAI,GAAG,CAAC,MAAM,EAAE,UAAU,CAAC;IAyB1C;;OAEG;IACH,eAAe,IAAI,MAAM,CAAC,UAAU,EAAE,MAAM,CAAC;CAe9C"}