milens 0.7.0 → 0.7.2

package/dist/server/tools/security.js

@@ -0,0 +1,232 @@
+import { z } from 'zod';
+import { resolve, relative, join, sep } from 'node:path';
+import { readFileSync, existsSync, mkdirSync, writeFileSync, readdirSync } from 'node:fs';
+import { loadRules } from '../../security/rules.js';
+import { globToRegex } from '../../utils.js';
+/** Resolve `file` under `root` and reject any path that escapes it (path traversal / symlink). */
+function resolveInsideRoot(root, file) {
+    const resolvedRoot = resolve(root);
+    const fullPath = resolve(resolvedRoot, file);
+    if (fullPath !== resolvedRoot && !fullPath.startsWith(resolvedRoot + sep))
+        return null;
+    return fullPath;
+}
+export function registerSecurityTools(server, deps) {
+    const { getDb } = deps;
+    server.tool('security_scan', 'Scan codebase for security vulnerabilities using 190+ built-in rules across 25 categories. Replaces multiple manual grep() calls. Categories: secrets, injection, rce, xss, deserialization, ssrf, xxe, path-traversal, file-upload, unicode, dangerous, config, data-leak, crypto, auth, jwt, cors-headers, dependency, cloud, docker, kubernetes, iac, business-logic, api-security, misc, file-access.', {
+        scope: z.enum(['all', 'secrets', 'injection', 'rce', 'xss', 'deserialization', 'ssrf', 'xxe', 'path-traversal', 'file-upload', 'unicode', 'dangerous', 'config', 'data-leak', 'crypto', 'auth', 'jwt', 'cors-headers', 'dependency', 'cloud', 'docker', 'kubernetes', 'iac', 'business-logic', 'api-security', 'misc', 'file-access']).optional().default('all').describe('Scan scope'),
+        repo: z.string().optional().describe('Repository root path'),
+        severity: z.enum(['CRITICAL', 'HIGH', 'MEDIUM', 'LOW']).optional().describe('Minimum severity filter'),
+        limit: z.number().optional().default(50).describe('Max findings'),
+    }, async ({ scope, repo, severity, limit }) => {
+        const { db, root } = getDb(repo);
+        const rules = loadRules();
+        // Filter rules by scope and severity
+        const filtered = rules.filter(r => {
+            if (scope !== 'all' && r.category !== scope)
+                return false;
+            if (severity) {
+                const sevOrder = { CRITICAL: 4, HIGH: 3, MEDIUM: 2, LOW: 1 };
+                if ((sevOrder[r.severity] || 0) < (sevOrder[severity] || 0))
+                    return false;
+            }
+            return r.enabled;
+        });
+        // Get all source files from the DB
+        const symbols = db.getAllSymbols();
+        const fileSet = new Set();
+        for (const s of symbols) {
+            if (s.filePath && !s.filePath.includes('node_modules') && !s.filePath.includes('.git')) {
+                fileSet.add(s.filePath);
+            }
+        }
+        // Also include non-code config files that may contain secrets
+        // (these typically have no indexed symbols but are critical for security scanning)
+        const SECRET_FILE_EXTS = new Set(['.env', '.yml', '.yaml', '.toml', '.ini', '.cfg', '.tf', '.json', '.npmrc', '.yarnrc']);
+        const SECRET_FILE_NAMES = new Set(['Dockerfile', 'docker-compose.yml', 'docker-compose.yaml', '.dockerignore', '.env.example']);
+        try {
+            const walkDir = (dir) => {
+                let entries;
+                try {
+                    entries = readdirSync(resolve(root, dir), { withFileTypes: true });
+                }
+                catch {
+                    return;
+                }
+                for (const entry of entries) {
+                    const relPath = join(dir, entry.name).replace(/\\/g, '/');
+                    if (entry.name.startsWith('.git') || entry.name === 'node_modules' || entry.name === '.milens')
+                        continue;
+                    if (entry.isDirectory()) {
+                        walkDir(relPath);
+                        continue;
+                    }
+                    const ext = entry.name.includes('.') ? entry.name.substring(entry.name.lastIndexOf('.')) : '';
+                    if (SECRET_FILE_EXTS.has(ext) || SECRET_FILE_NAMES.has(entry.name)) {
+                        fileSet.add(relPath);
+                    }
+                }
+            };
+            walkDir('.');
+        }
+        catch { /* ignore directory walk errors */ }
+        const files = [...fileSet].slice(0, 2000); // cap at 2000 files (upped from 1000 to accommodate config files)
+        const { readFileSync: rfs, existsSync: es } = await import('node:fs');
+        const { resolve: resolvePath } = await import('node:path');
+        const findings = [];
+        const byCategory = {};
+        const bySeverity = { CRITICAL: 0, HIGH: 0, MEDIUM: 0, LOW: 0 };
+        for (const file of files) {
+            const fullPath = resolvePath(root, file);
+            if (!es(fullPath))
+                continue;
+            // Apply excludeGlob from each rule's exclusion pattern
+            let shouldExclude = false;
+            for (const rule of filtered) {
+                if (rule.excludeGlob) {
+                    const excludePatterns = rule.excludeGlob.split(',');
+                    for (const pattern of excludePatterns) {
+                        const regex = globToRegex(pattern.trim());
+                        if (regex.test(file) || regex.test('/' + file)) {
+                            shouldExclude = true;
+                            break;
+                        }
+                    }
+                }
+                if (shouldExclude)
+                    break;
+            }
+            if (shouldExclude)
+                continue;
+            // Skip files that don't match rule fileGlobs (simple check)
+            const applicableRules = filtered.filter(r => {
+                if (!r.fileGlob)
+                    return true;
+                // Simple glob: just check extension
+                const ext = r.fileGlob.replace('**/*.', '').replace('**/*', '');
+                return file.endsWith(ext) || r.fileGlob === '**/*';
+            });
+            if (applicableRules.length === 0)
+                continue;
+            try {
+                const content = rfs(fullPath, 'utf-8');
+                const lines = content.split('\n');
+                for (const rule of applicableRules) {
+                    for (const pattern of rule.patterns) {
+                        let match;
+                        // Reset regex lastIndex for global patterns
+                        pattern.lastIndex = 0;
+                        while ((match = pattern.exec(content)) !== null) {
+                            const lineNum = content.substring(0, match.index).split('\n').length;
+                            const matchedLine = lines[lineNum - 1] || '';
+                            // Filter SEC-001 false positives in Vue/HTML template attributes:
+                            // - kebab-case event names (e.g., @generate-password="...")
+                            // - template attribute bindings (e.g., @toggle-password="...", :password="...")
+                            if (rule.id === 'SEC-001' && file.endsWith('.vue')) {
+                                const beforeMatch = matchedLine.substring(0, matchedLine.indexOf(match[0]));
+                                if (beforeMatch.includes('@') || beforeMatch.includes('v-on:') ||
+                                    beforeMatch.match(/(^|\s):(\w+-)*password/))
+                                    continue;
+                                // Check if 'password' preceded by hyphen (kebab-case compound)
+                                const keywordIdx = matchedLine.indexOf(match[0]);
+                                if (keywordIdx > 0 && matchedLine[keywordIdx - 1] === '-')
+                                    continue;
+                            }
+                            const ctxStart = Math.max(0, lineNum - 3);
+                            const ctxEnd = Math.min(lines.length, lineNum + 2);
+                            // Minified/bundled files can have a single line spanning hundreds of KB
+                            // (e.g. webpack bundles) — cap context length so one finding can't blow
+                            // past the tool's output size limit.
+                            const MAX_CONTEXT_LEN = 500;
+                            let context = lines.slice(ctxStart, ctxEnd).join('\n');
+                            if (context.length > MAX_CONTEXT_LEN) {
+                                context = context.slice(0, MAX_CONTEXT_LEN) + '... [truncated]';
+                            }
+                            findings.push({
+                                ruleId: rule.id,
+                                category: rule.category,
+                                severity: rule.severity,
+                                owasp: rule.owasp,
+                                file,
+                                line: lineNum,
+                                match: match[0].length > 100 ? match[0].slice(0, 97) + '...' : match[0],
+                                context,
+                                fix: rule.fix,
+                            });
+                            byCategory[rule.category] = (byCategory[rule.category] || 0) + 1;
+                            bySeverity[rule.severity] = (bySeverity[rule.severity] || 0) + 1;
+                        }
+                    }
+                }
+            }
+            catch {
+                // Skip unreadable files
+            }
+        }
+        // Calculate security score (100 - deductions)
+        const deduction = findings.filter((f) => f.severity === 'CRITICAL').length * 5 +
+            findings.filter((f) => f.severity === 'HIGH').length * 2 +
+            findings.filter((f) => f.severity === 'MEDIUM').length * 0.5;
+        const score = Math.max(0, Math.round(100 - deduction));
+        const limited = findings.slice(0, limit);
+        return {
+            content: [{
+                    type: 'text',
+                    text: JSON.stringify({
+                        summary: {
+                            totalScanned: files.length,
+                            findings: findings.length,
+                            byCategory,
+                            bySeverity,
+                            score,
+                        },
+                        findings: limited,
+                    }, null, 2),
+                }],
+        };
+    });
+    server.tool('fix_apply', 'Apply a security fix suggestion to a file. Creates a backup before modifying. CRITICAL rules require confirm: true.', {
+        ruleId: z.string().describe('Security rule ID (e.g. "hardcoded_secret")'),
+        file: z.string().describe('File path relative to repo root'),
+        line: z.number().describe('Line number where the issue was found'),
+        confirm: z.boolean().optional().default(false).describe('Confirmation required for CRITICAL rules'),
+        repo: z.string().optional(),
+    }, async ({ ruleId, file, line, confirm, repo }) => {
+        const { root } = getDb(repo);
+        const rules = loadRules();
+        const rule = rules.find(r => r.id === ruleId);
+        if (!rule)
+            return { content: [{ type: 'text', text: `Rule not found: "${ruleId}"` }] };
+        if (rule.severity === 'CRITICAL' && !confirm) {
+            return { content: [{ type: 'text', text: `CRITICAL rule "${ruleId}" requires confirmation. Set confirm: true to proceed.` }] };
+        }
+        const fullPath = resolveInsideRoot(root, file);
+        if (!fullPath)
+            return { content: [{ type: 'text', text: `Invalid file path: "${file}" resolves outside the repo root.` }] };
+        if (!existsSync(fullPath))
+            return { content: [{ type: 'text', text: `File not found: ${file}` }] };
+        const content = readFileSync(fullPath, 'utf-8');
+        const lines = content.split('\n');
+        if (line < 1 || line > lines.length)
+            return { content: [{ type: 'text', text: `Line ${line} out of range (file has ${lines.length} lines).` }] };
+        // Backup original
+        const backupDir = join(root, '.milens', 'backups');
+        mkdirSync(backupDir, { recursive: true });
+        const backupPath = join(backupDir, `${file.replace(/[\\/]/g, '_')}_${Date.now()}.bak`);
+        writeFileSync(backupPath, content, 'utf-8');
+        // Apply fix: add comment above the affected line with the fix suggestion
+        const targetLine = lines[line - 1];
+        const indent = targetLine.match(/^(\s*)/)?.[1] ?? '';
+        const ext = file.split('.').pop()?.toLowerCase() ?? '';
+        const isPythonStyle = /^(py|rb|sh|yaml|yml|toml|cfg|ini|env)$/.test(ext);
+        const isHtmlStyle = /^(html|htm|vue|xml)$/.test(ext);
+        const commentPrefix = isPythonStyle ? '#' : isHtmlStyle ? '<!--' : '//';
+        const commentSuffix = isHtmlStyle ? ' -->' : '';
+        const fixComment = `${indent}${commentPrefix} milens(fix): rule=${rule.id} — ${rule.fix ?? 'Review manually'}${commentSuffix}`;
+        lines.splice(line - 1, 0, fixComment);
+        const newContent = lines.join('\n');
+        writeFileSync(fullPath, newContent, 'utf-8');
+        return { content: [{ type: 'text', text: `Fix comment added for rule "${ruleId}" at ${file}:${line}\nSeverity: ${rule.severity}\nBackup: ${relative(root, backupPath)}\nSuggestion: ${rule.fix ?? 'Manual review needed'}\n\nAdded fix annotation above line ${line}. Original line is preserved below — replace manually following the suggestion.` }] };
+    });
+}
+//# sourceMappingURL=security.js.map

package/dist/server/tools/security.js.map

@@ -0,0 +1 @@
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package/dist/server/tools/session.d.ts

@@ -0,0 +1,3 @@
+import type { McpServer } from '@modelcontextprotocol/sdk/server/mcp.js';
+import type { Deps } from './deps.js';
+export declare function registerSessionTools(server: McpServer, deps: Deps): void;

package/dist/server/tools/session.js

@@ -0,0 +1,160 @@
+import { z } from 'zod';
+import { AnnotationStore } from '../../store/annotations.js';
+import { HookManager, defaultOnSessionStart, defaultOnSessionEnd, defaultOnPreCommit, defaultOnFileChange, defaultOnPreCompact, defaultOnPostCompact, } from '../hooks.js';
+import { BUILD_SHA, BUILT_AT } from '../../build-info.js';
+export function registerSessionTools(server, deps) {
+    const { getDb, guard, getToolCallCount } = deps;
+    server.tool('annotate', 'Record a note about a symbol for future sessions. Use after discovering bugs, patterns, or important caveats.', {
+        symbol: z.string(),
+        key: z.enum(['note', 'bug', 'security', 'architecture', 'workflow', 'test', 'dependency', 'refactor']),
+        value: z.string(),
+        agent: z.string().optional(),
+        session_id: z.string().optional(),
+        confidence: z.number().optional().default(0.5),
+        repo: z.string().optional().describe('Repository root path (for multi-repo workspaces)'),
+    }, async ({ symbol, key, value, agent, session_id, confidence, repo }) => {
+        const { db } = getDb(repo);
+        const store = new AnnotationStore(db.connection);
+        const symbolHash = store.getCurrentSymbolHash(symbol) ?? undefined;
+        const ann = store.annotate(symbol, key, value, { agent, sessionId: session_id, confidence, symbolHash });
+        return { content: [{ type: 'text', text: `Annotation saved: ${ann.id}\n  symbol: ${ann.symbol}\n  key: ${ann.key}\n  confidence: ${ann.confidence}` }] };
+    });
+    server.tool('recall', 'Retrieve annotations saved in previous sessions. Filter by symbol, key, or agent. Set history=true to include evolution log entries (previous values before overwrites).', {
+        symbol: z.string().optional(), key: z.enum(['note', 'bug', 'security', 'architecture', 'workflow', 'test', 'dependency', 'refactor']).optional(),
+        agent: z.string().optional(), limit: z.number().optional().default(50),
+        history: z.boolean().optional().default(false).describe('Include evolution log entries showing previous values before overwrites'),
+        repo: z.string().optional().describe('Repository root path (for multi-repo workspaces)'),
+    }, async ({ symbol, key, agent, limit, history, repo }) => {
+        const { db } = getDb(repo);
+        const store = new AnnotationStore(db.connection);
+        const results = store.recall({ symbol, key, agent, limit });
+        if (results.length === 0)
+            return { content: [{ type: 'text', text: 'No annotations found.' }] };
+        const lines = [`${results.length} annotation(s):\n`];
+        for (const a of results) {
+            lines.push(`[${a.key}] ${a.symbol} — ${a.value.slice(0, 120)}`);
+            lines.push(`  confidence: ${a.confidence.toFixed(1)} | agent: ${a.agent ?? '?'} | ${a.updatedAt}`);
+            if (history) {
+                const events = store.getHistory(a.id);
+                if (events.length > 0) {
+                    lines.push(`  evolution history (${events.length} event(s)):`);
+                    for (const e of events) {
+                        const oldVal = e.oldValue ? `"${e.oldValue.slice(0, 80)}"` : '(none)';
+                        const newVal = e.newValue ? `"${e.newValue.slice(0, 80)}"` : '(none)';
+                        lines.push(`    ${e.createdAt} | ${e.event}: ${oldVal} → ${newVal}`);
+                    }
+                }
+            }
+            lines.push('');
+        }
+        return { content: [{ type: 'text', text: lines.join('\n') }] };
+    });
+    server.tool('session_start', 'Start a new session. Returns a session ID to use with annotate, session_end, and handoff.', { agent: z.string().describe('Agent name (e.g. vibe-coder, reviewer)'),
+        repo: z.string().optional().describe('Repository root path (for multi-repo workspaces)') }, async ({ agent, repo }) => {
+        const { db, root, dbPath } = getDb(repo);
+        const store = new AnnotationStore(db.connection);
+        const sessionId = store.sessionStart(agent);
+        let hookOutput = '';
+        try {
+            const manager = new HookManager();
+            const config = manager.loadConfig(root);
+            if (config.enabled && config.onSessionStart) {
+                hookOutput = await defaultOnSessionStart({ agent, sessionId, rootPath: root }, dbPath);
+            }
+        }
+        catch { /* hooks are best-effort */ }
+        const text = `Session started: ${sessionId}\nAgent: ${agent}\nBuild: ${BUILD_SHA} (${BUILT_AT})\nUse this ID with annotate() and session_end().`;
+        return { content: [{ type: 'text', text: hookOutput ? `${hookOutput}\n\n${text}` : text }] };
+    });
+    server.tool('session_context', 'Get metadata about a session: annotations, tool calls, duration.', { session_id: z.string(),
+        repo: z.string().optional().describe('Repository root path (for multi-repo workspaces)') }, async ({ session_id, repo }) => {
+        const { db, root } = getDb(repo);
+        const store = new AnnotationStore(db.connection);
+        const ctx = store.sessionContext(session_id);
+        if (!ctx.session)
+            return { content: [{ type: 'text', text: `Session "${session_id}" not found.` }] };
+        const s = ctx.session;
+        const liveCalls = getToolCallCount(root);
+        const displayCalls = s.toolCallsCount > 0 ? s.toolCallsCount : liveCalls;
+        const lines = [
+            `Session: ${s.id}`,
+            `Agent: ${s.agent} | Status: ${s.status}`,
+            `Started: ${s.startedAt} | Ended: ${s.endedAt ?? 'in progress'}`,
+            `Tool calls: ${displayCalls}${s.toolCallsCount === 0 ? ' (live count, resets on restart)' : ''} | Annotations: ${ctx.annotations.length}`,
+        ];
+        if (s.context)
+            lines.push(`Context: ${s.context}`);
+        if (ctx.annotations.length > 0) {
+            lines.push(`\nAnnotations (${ctx.annotations.length}):`);
+            for (const a of ctx.annotations) {
+                lines.push(`  [${a.key}] ${a.symbol}: ${a.value.slice(0, 80)}`);
+            }
+        }
+        return { content: [{ type: 'text', text: lines.join('\n') }] };
+    });
+    server.tool('session_end', 'End a session and record its stats. Shows audit trail: which symbols were safety-checked vs total edit operations. Use at the end of every session.', { session_id: z.string(), status: z.enum(['completed', 'failed']).optional().default('completed'),
+        repo: z.string().optional().describe('Repository root path (for multi-repo workspaces)') }, async ({ session_id, status, repo }) => {
+        const { db, root, dbPath } = getDb(repo);
+        const store = new AnnotationStore(db.connection);
+        const summary = store.sessionEnd(session_id, status);
+        // Audit trail from SessionGuard
+        const audit = guard.getAudit(session_id);
+        guard.clear(session_id);
+        let hookOutput = '';
+        try {
+            const ctx = store.sessionContext(session_id);
+            const manager = new HookManager();
+            const config = manager.loadConfig(root);
+            if (config.enabled && config.onSessionEnd) {
+                hookOutput = await defaultOnSessionEnd({ agent: ctx.session.agent, sessionId: session_id, rootPath: root }, dbPath);
+            }
+        }
+        catch { /* hooks are best-effort */ }
+        const lines = [
+            `Session ended: ${session_id}`,
+            `Status: ${status}`,
+            `Annotations: ${summary.annotationCount}`,
+            `───`,
+            `Audit Trail:`,
+            `  safety checks performed: ${audit.checked.length}`,
+            audit.checked.length > 0 ? `  symbols checked: ${audit.checked.join(', ')}` : '  ⚠ no symbols were checked via guard_edit_check',
+            audit.editOps > 0 ? `  edit operations reported: ${audit.editOps}` : null,
+        ].filter(Boolean);
+        const text = lines.join('\n');
+        return { content: [{ type: 'text', text: hookOutput ? `${text}\n\n${hookOutput}` : text }] };
+    });
+    server.tool('handoff', 'Transfer context from one agent session to another. Ends the source session and creates a new one for the target agent.', {
+        from_session: z.string(), to_agent: z.string(),
+        context: z.string().describe('Summary of what was done, key decisions, and caveats for the next agent'),
+        repo: z.string().optional().describe('Repository root path (for multi-repo workspaces)'),
+    }, async ({ from_session, to_agent, context, repo }) => {
+        const { db } = getDb(repo);
+        const store = new AnnotationStore(db.connection);
+        const result = store.handoff(from_session, to_agent, context);
+        return { content: [{ type: 'text', text: `Handoff complete.\nNew session: ${result.newSessionId}\nAgent: ${to_agent}\nAnnotations recorded in prior session: ${result.annotationsCopied} (retrievable via recall())` }] };
+    });
+    server.tool('pre_commit_check', 'Run pre-commit risk analysis: detect_changes + review_pr + dead code + coverage gaps. Use before committing.', { repo: z.string().optional().describe('Repository root path') }, async ({ repo }) => {
+        const { root } = getDb(repo);
+        const report = await defaultOnPreCommit(root);
+        return { content: [{ type: 'text', text: report }] };
+    });
+    server.tool('hook_onFileChange', 'Trigger the onFileChange hook. Call this when files are modified to get impact summary.', {
+        files: z.array(z.string()).describe('List of changed file paths'),
+        repo: z.string().optional(),
+    }, async ({ files, repo }) => {
+        const { root } = getDb(repo);
+        const report = await defaultOnFileChange(files, root);
+        return { content: [{ type: 'text', text: report }] };
+    });
+    server.tool('hook_preCompact', 'Trigger pre-compaction hook. Saves a metrics snapshot before context window compaction.', { repo: z.string().optional() }, async ({ repo }) => {
+        const { root, dbPath } = getDb(repo);
+        const report = await defaultOnPreCompact(root, dbPath);
+        return { content: [{ type: 'text', text: report }] };
+    });
+    server.tool('hook_postCompact', 'Trigger post-compaction hook. Recalls annotations to restore context after compaction.', { repo: z.string().optional() }, async ({ repo }) => {
+        const { root } = getDb(repo);
+        const report = await defaultOnPostCompact(root);
+        return { content: [{ type: 'text', text: report }] };
+    });
+}
+//# sourceMappingURL=session.js.map

package/dist/server/tools/session.js.map

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package/dist/server/tools/testing.d.ts

@@ -0,0 +1,3 @@
+import type { McpServer } from '@modelcontextprotocol/sdk/server/mcp.js';
+import type { Deps } from './deps.js';
+export declare function registerTestingTools(server: McpServer, deps: Deps): void;