milens 0.5.8 → 0.6.0

package/dist/store/db.js

@@ -21,42 +21,42 @@ export class Database {
     prepareStatements() {
         return {
             checkHash: this.db.prepare('SELECT hash FROM file_hashes WHERE path = ?'),
-            upsertHash: this.db.prepare(`INSERT INTO file_hashes (path, hash) VALUES (?, ?)
+            upsertHash: this.db.prepare(`INSERT INTO file_hashes (path, hash) VALUES (?, ?)
          ON CONFLICT(path) DO UPDATE SET hash = excluded.hash, analyzed_at = datetime('now')`),
-            insertSym: this.db.prepare(`INSERT OR REPLACE INTO symbols (id, name, kind, file_path, start_line, end_line, exported, parent_id, signature, role, heat)
+            insertSym: this.db.prepare(`INSERT OR REPLACE INTO symbols (id, name, kind, file_path, start_line, end_line, exported, parent_id, signature, role, heat)
          VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`),
             updateMeta: this.db.prepare(`UPDATE symbols SET role = ?, heat = ? WHERE id = ?`),
             upsertZone: this.db.prepare(`UPDATE file_hashes SET zone = ? WHERE path = ?`),
-            insertLink: this.db.prepare(`INSERT OR REPLACE INTO links (id, from_id, to_id, type, confidence, line_number)
+            insertLink: this.db.prepare(`INSERT OR REPLACE INTO links (id, from_id, to_id, type, confidence, line_number)
          VALUES (?, ?, ?, ?, ?, ?)`),
-            searchFts: this.db.prepare(`SELECT s.* FROM symbol_fts f
-         JOIN symbols s ON s.rowid = f.rowid
-         WHERE symbol_fts MATCH ?
+            searchFts: this.db.prepare(`SELECT s.* FROM symbol_fts f
+         JOIN symbols s ON s.rowid = f.rowid
+         WHERE symbol_fts MATCH ?
          ORDER BY rank LIMIT ?`),
             byName: this.db.prepare('SELECT * FROM symbols WHERE name = ?'),
             byId: this.db.prepare('SELECT * FROM symbols WHERE id = ?'),
             byFile: this.db.prepare('SELECT * FROM symbols WHERE file_path = ?'),
             linksIn: this.db.prepare('SELECT * FROM links WHERE to_id = ?'),
             linksOut: this.db.prepare('SELECT * FROM links WHERE from_id = ?'),
-            upstream: this.db.prepare(`
-        WITH RECURSIVE upstream(id, depth, via) AS (
-          SELECT from_id, 1, type FROM links WHERE to_id = ? AND type IN ('calls', 'imports', 'extends', 'implements')
-          UNION
-          SELECT l.from_id, u.depth + 1, l.type
-          FROM links l JOIN upstream u ON l.to_id = u.id
-          WHERE u.depth < ? AND l.type IN ('calls', 'imports', 'extends', 'implements')
-        )
-        SELECT DISTINCT s.*, u.depth, u.via FROM upstream u JOIN symbols s ON s.id = u.id ORDER BY u.depth
+            upstream: this.db.prepare(`
+        WITH RECURSIVE upstream(id, depth, via) AS (
+          SELECT from_id, 1, type FROM links WHERE to_id = ? AND type IN ('calls', 'imports', 'extends', 'implements')
+          UNION
+          SELECT l.from_id, u.depth + 1, l.type
+          FROM links l JOIN upstream u ON l.to_id = u.id
+          WHERE u.depth < ? AND l.type IN ('calls', 'imports', 'extends', 'implements')
+        )
+        SELECT DISTINCT s.*, u.depth, u.via FROM upstream u JOIN symbols s ON s.id = u.id ORDER BY u.depth
       `),
-            downstream: this.db.prepare(`
-        WITH RECURSIVE downstream(id, depth, via) AS (
-          SELECT to_id, 1, type FROM links WHERE from_id = ? AND type IN ('calls', 'imports', 'extends', 'implements')
-          UNION
-          SELECT l.to_id, d.depth + 1, l.type
-          FROM links l JOIN downstream d ON l.from_id = d.id
-          WHERE d.depth < ? AND l.type IN ('calls', 'imports', 'extends', 'implements')
-        )
-        SELECT DISTINCT s.*, d.depth, d.via FROM downstream d JOIN symbols s ON s.id = d.id ORDER BY d.depth
+            downstream: this.db.prepare(`
+        WITH RECURSIVE downstream(id, depth, via) AS (
+          SELECT to_id, 1, type FROM links WHERE from_id = ? AND type IN ('calls', 'imports', 'extends', 'implements')
+          UNION
+          SELECT l.to_id, d.depth + 1, l.type
+          FROM links l JOIN downstream d ON l.from_id = d.id
+          WHERE d.depth < ? AND l.type IN ('calls', 'imports', 'extends', 'implements')
+        )
+        SELECT DISTINCT s.*, d.depth, d.via FROM downstream d JOIN symbols s ON s.id = d.id ORDER BY d.depth
       `),
             countSymbols: this.db.prepare('SELECT COUNT(*) as c FROM symbols'),
             countLinks: this.db.prepare('SELECT COUNT(*) as c FROM links'),
@@ -176,14 +176,16 @@ export class Database {
         return rows.map(rowToLink);
     }
     findDeadCode(kind, limit = 50) {
+        // Exclude: section symbols (markdown headings), test fixtures (not real production code)
+        const excludeClause = `AND s.kind != 'section' AND s.file_path NOT LIKE 'test/fixtures/%'`;
         const sql = kind
-            ? `SELECT s.* FROM symbols s
-         LEFT JOIN links l ON l.to_id = s.id AND l.type != 'contains'
-         WHERE s.exported = 1 AND s.kind = ? AND l.id IS NULL
+            ? `SELECT s.* FROM symbols s
+         LEFT JOIN links l ON l.to_id = s.id AND l.type != 'contains'
+         WHERE s.exported = 1 AND s.kind = ? ${excludeClause} AND l.id IS NULL
          LIMIT ?`
-            : `SELECT s.* FROM symbols s
-         LEFT JOIN links l ON l.to_id = s.id AND l.type != 'contains'
-         WHERE s.exported = 1 AND l.id IS NULL
+            : `SELECT s.* FROM symbols s
+         LEFT JOIN links l ON l.to_id = s.id AND l.type != 'contains'
+         WHERE s.exported = 1 ${excludeClause} AND l.id IS NULL
          LIMIT ?`;
         const rows = kind
             ? this.db.prepare(sql).all(kind, limit)
@@ -191,25 +193,25 @@ export class Database {
         return rows.map(rowToSymbol);
     }
     getTypeHierarchy(symbolId) {
-        const ancestors = this.db.prepare(`
-      WITH RECURSIVE up(id, depth) AS (
-        SELECT to_id, 1 FROM links WHERE from_id = ? AND type IN ('extends', 'implements')
-        UNION
-        SELECT l.to_id, u.depth + 1
-        FROM links l JOIN up u ON l.from_id = u.id
-        WHERE l.type IN ('extends', 'implements') AND u.depth < 10
-      )
-      SELECT DISTINCT s.*, u.depth FROM up u JOIN symbols s ON s.id = u.id ORDER BY u.depth
+        const ancestors = this.db.prepare(`
+      WITH RECURSIVE up(id, depth) AS (
+        SELECT to_id, 1 FROM links WHERE from_id = ? AND type IN ('extends', 'implements')
+        UNION
+        SELECT l.to_id, u.depth + 1
+        FROM links l JOIN up u ON l.from_id = u.id
+        WHERE l.type IN ('extends', 'implements') AND u.depth < 10
+      )
+      SELECT DISTINCT s.*, u.depth FROM up u JOIN symbols s ON s.id = u.id ORDER BY u.depth
     `).all(symbolId);
-        const descendants = this.db.prepare(`
-      WITH RECURSIVE down(id, depth) AS (
-        SELECT from_id, 1 FROM links WHERE to_id = ? AND type IN ('extends', 'implements')
-        UNION
-        SELECT l.from_id, d.depth + 1
-        FROM links l JOIN down d ON l.to_id = d.id
-        WHERE l.type IN ('extends', 'implements') AND d.depth < 10
-      )
-      SELECT DISTINCT s.*, d.depth FROM down d JOIN symbols s ON s.id = d.id ORDER BY d.depth
+        const descendants = this.db.prepare(`
+      WITH RECURSIVE down(id, depth) AS (
+        SELECT from_id, 1 FROM links WHERE to_id = ? AND type IN ('extends', 'implements')
+        UNION
+        SELECT l.from_id, d.depth + 1
+        FROM links l JOIN down d ON l.to_id = d.id
+        WHERE l.type IN ('extends', 'implements') AND d.depth < 10
+      )
+      SELECT DISTINCT s.*, d.depth FROM down d JOIN symbols s ON s.id = d.id ORDER BY d.depth
     `).all(symbolId);
         return {
             ancestors: ancestors.map(r => ({ symbol: rowToSymbol(r), depth: r.depth })),
@@ -224,15 +226,15 @@ export class Database {
         const fromId = fromSyms[0].id;
         const toIds = new Set(toSyms.map(s => s.id));
         // BFS outgoing from source
-        const rows = this.db.prepare(`
-      WITH RECURSIVE path(id, depth, via) AS (
-        SELECT to_id, 1, type FROM links WHERE from_id = ? AND type != 'contains'
-        UNION
-        SELECT l.to_id, p.depth + 1, l.type
-        FROM links l JOIN path p ON l.from_id = p.id
-        WHERE l.type != 'contains' AND p.depth < ?
-      )
-      SELECT DISTINCT s.*, p.depth, p.via FROM path p JOIN symbols s ON s.id = p.id ORDER BY p.depth
+        const rows = this.db.prepare(`
+      WITH RECURSIVE path(id, depth, via) AS (
+        SELECT to_id, 1, type FROM links WHERE from_id = ? AND type != 'contains'
+        UNION
+        SELECT l.to_id, p.depth + 1, l.type
+        FROM links l JOIN path p ON l.from_id = p.id
+        WHERE l.type != 'contains' AND p.depth < ?
+      )
+      SELECT DISTINCT s.*, p.depth, p.via FROM path p JOIN symbols s ON s.id = p.id ORDER BY p.depth
     `).all(fromId, maxDepth);
         const result = [];
         for (const r of rows) {
@@ -285,14 +287,14 @@ export class Database {
         };
     }
     getConfidenceDistribution() {
-        const rows = this.db.prepare(`
-      SELECT
-        SUM(CASE WHEN confidence >= 0.9 THEN 1 ELSE 0 END) as high,
-        SUM(CASE WHEN confidence >= 0.7 AND confidence < 0.9 THEN 1 ELSE 0 END) as medium,
-        SUM(CASE WHEN confidence < 0.7 THEN 1 ELSE 0 END) as low,
-        COUNT(*) as total
-      FROM links
-      WHERE type != 'contains'
+        const rows = this.db.prepare(`
+      SELECT
+        SUM(CASE WHEN confidence >= 0.9 THEN 1 ELSE 0 END) as high,
+        SUM(CASE WHEN confidence >= 0.7 AND confidence < 0.9 THEN 1 ELSE 0 END) as medium,
+        SUM(CASE WHEN confidence < 0.7 THEN 1 ELSE 0 END) as low,
+        COUNT(*) as total
+      FROM links
+      WHERE type != 'contains'
     `).get();
         return {
             high: rows?.high ?? 0,
@@ -345,34 +347,34 @@ export class Database {
     // ── Route/endpoint detection via link patterns ──
     getEntrypoints() {
         // Symbols with role='entrypoint' OR exported + 0 incoming non-contains links
-        const rows = this.db.prepare(`
-      SELECT s.* FROM symbols s
-      WHERE s.exported = 1
-        AND s.role = 'entrypoint'
-      ORDER BY s.heat DESC
-      LIMIT 50
+        const rows = this.db.prepare(`
+      SELECT s.* FROM symbols s
+      WHERE s.exported = 1
+        AND s.role = 'entrypoint'
+      ORDER BY s.heat DESC
+      LIMIT 50
     `).all();
         return rows.map(rowToSymbol);
     }
     // ── Domain clustering stats ──
     getDomainStats() {
-        const rows = this.db.prepare(`
-      SELECT fh.zone AS domain, COUNT(DISTINCT fh.path) AS file_count,
-             COUNT(s.id) AS symbol_count
-      FROM file_hashes fh
-      LEFT JOIN symbols s ON s.file_path = fh.path
-      WHERE fh.zone IS NOT NULL
-      GROUP BY fh.zone
-      ORDER BY symbol_count DESC
+        const rows = this.db.prepare(`
+      SELECT fh.zone AS domain, COUNT(DISTINCT fh.path) AS file_count,
+             COUNT(s.id) AS symbol_count
+      FROM file_hashes fh
+      LEFT JOIN symbols s ON s.file_path = fh.path
+      WHERE fh.zone IS NOT NULL
+      GROUP BY fh.zone
+      ORDER BY symbol_count DESC
     `).all();
         return rows.map((r) => ({ domain: r.domain, files: r.file_count, symbols: r.symbol_count }));
     }
     // ── Staleness detection ──
     getStaleFiles(hoursOld = 24) {
-        const rows = this.db.prepare(`
-      SELECT path FROM file_hashes
-      WHERE analyzed_at < datetime('now', '-' || ? || ' hours')
-      ORDER BY analyzed_at ASC
+        const rows = this.db.prepare(`
+      SELECT path FROM file_hashes
+      WHERE analyzed_at < datetime('now', '-' || ? || ' hours')
+      ORDER BY analyzed_at ASC
     `).all(hoursOld);
         return rows.map((r) => r.path);
     }
@@ -395,39 +397,39 @@ export class Database {
     }
     // ── Tool usage tracking ──
     logToolUsage(tool, durationMs, tokensOut, tokensSaved, repo) {
-        this.db.prepare(`INSERT INTO tool_usage (tool, duration_ms, tokens_out, tokens_saved, repo)
+        this.db.prepare(`INSERT INTO tool_usage (tool, duration_ms, tokens_out, tokens_saved, repo)
        VALUES (?, ?, ?, ?, ?)`).run(tool, durationMs, tokensOut, tokensSaved, repo ?? null);
     }
     getToolUsageStats() {
-        const totals = this.db.prepare(`
-      SELECT COUNT(*) as total_calls,
-             COALESCE(SUM(tokens_saved), 0) as total_saved,
-             COALESCE(SUM(tokens_out), 0) as total_out,
-             COALESCE(SUM(duration_ms), 0) as total_ms
-      FROM tool_usage
+        const totals = this.db.prepare(`
+      SELECT COUNT(*) as total_calls,
+             COALESCE(SUM(tokens_saved), 0) as total_saved,
+             COALESCE(SUM(tokens_out), 0) as total_out,
+             COALESCE(SUM(duration_ms), 0) as total_ms
+      FROM tool_usage
     `).get();
-        const byTool = this.db.prepare(`
-      SELECT tool, COUNT(*) as calls,
-             COALESCE(SUM(tokens_saved), 0) as tokens_saved,
-             COALESCE(SUM(tokens_out), 0) as tokens_out,
-             CAST(COALESCE(AVG(duration_ms), 0) AS INTEGER) as avg_ms
-      FROM tool_usage
-      GROUP BY tool
-      ORDER BY calls DESC
+        const byTool = this.db.prepare(`
+      SELECT tool, COUNT(*) as calls,
+             COALESCE(SUM(tokens_saved), 0) as tokens_saved,
+             COALESCE(SUM(tokens_out), 0) as tokens_out,
+             CAST(COALESCE(AVG(duration_ms), 0) AS INTEGER) as avg_ms
+      FROM tool_usage
+      GROUP BY tool
+      ORDER BY calls DESC
     `).all();
-        const byDay = this.db.prepare(`
-      SELECT date(called_at) as date, COUNT(*) as calls,
-             COALESCE(SUM(tokens_saved), 0) as tokens_saved
-      FROM tool_usage
-      GROUP BY date(called_at)
-      ORDER BY date DESC
-      LIMIT 30
+        const byDay = this.db.prepare(`
+      SELECT date(called_at) as date, COUNT(*) as calls,
+             COALESCE(SUM(tokens_saved), 0) as tokens_saved
+      FROM tool_usage
+      GROUP BY date(called_at)
+      ORDER BY date DESC
+      LIMIT 30
     `).all();
-        const recentCalls = this.db.prepare(`
-      SELECT tool, called_at, duration_ms, tokens_saved
-      FROM tool_usage
-      ORDER BY id DESC
-      LIMIT 50
+        const recentCalls = this.db.prepare(`
+      SELECT tool, called_at, duration_ms, tokens_saved
+      FROM tool_usage
+      ORDER BY id DESC
+      LIMIT 50
     `).all();
         return {
             totalCalls: totals.total_calls,

package/dist/store/db.js.map

@@ -1 +1 @@
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package/dist/store/schema.sql

@@ -1,83 +1,83 @@
--- milens code intelligence database schema
-
-CREATE TABLE IF NOT EXISTS symbols (
-  id    TEXT PRIMARY KEY,
-  name  TEXT NOT NULL,
-  kind  TEXT NOT NULL,
-  file_path   TEXT NOT NULL,
-  start_line  INTEGER,
-  end_line    INTEGER,
-  exported    INTEGER DEFAULT 0,
-  parent_id   TEXT,
-  signature   TEXT,
-  role        TEXT,
-  heat        INTEGER DEFAULT 0
-);
-
-CREATE TABLE IF NOT EXISTS links (
-  id          TEXT PRIMARY KEY,
-  from_id     TEXT NOT NULL,
-  to_id       TEXT NOT NULL,
-  type        TEXT NOT NULL,
-  confidence  REAL DEFAULT 1.0,
-  line_number INTEGER
-);
-
-CREATE TABLE IF NOT EXISTS file_hashes (
-  path        TEXT PRIMARY KEY,
-  hash        TEXT NOT NULL,
-  analyzed_at TEXT NOT NULL DEFAULT (datetime('now')),
-  zone        TEXT
-);
-
-CREATE TABLE IF NOT EXISTS repo_meta (
-  key   TEXT PRIMARY KEY,
-  value TEXT NOT NULL
-);
-
-CREATE TABLE IF NOT EXISTS meta (
-  key   TEXT PRIMARY KEY,
-  value TEXT
-);
-
-CREATE INDEX IF NOT EXISTS idx_symbols_name ON symbols(name);
-CREATE INDEX IF NOT EXISTS idx_symbols_file ON symbols(file_path);
-CREATE INDEX IF NOT EXISTS idx_symbols_kind ON symbols(kind);
-CREATE INDEX IF NOT EXISTS idx_links_from   ON links(from_id);
-CREATE INDEX IF NOT EXISTS idx_links_to     ON links(to_id);
-CREATE INDEX IF NOT EXISTS idx_links_type   ON links(type);
-
--- FTS5 full-text search on symbol names and paths
-CREATE VIRTUAL TABLE IF NOT EXISTS symbol_fts USING fts5(
-  name,
-  file_path,
-  kind,
-  content='symbols',
-  content_rowid='rowid'
-);
-
--- Triggers to keep FTS in sync
-CREATE TRIGGER IF NOT EXISTS symbols_ai AFTER INSERT ON symbols BEGIN
-  INSERT INTO symbol_fts(rowid, name, file_path, kind)
-  VALUES (new.rowid, new.name, new.file_path, new.kind);
-END;
-
-CREATE TRIGGER IF NOT EXISTS symbols_ad AFTER DELETE ON symbols BEGIN
-  INSERT INTO symbol_fts(symbol_fts, rowid, name, file_path, kind)
-  VALUES ('delete', old.rowid, old.name, old.file_path, old.kind);
-END;
-
--- Tool usage tracking for dashboard analytics
-CREATE TABLE IF NOT EXISTS tool_usage (
-  id          INTEGER PRIMARY KEY AUTOINCREMENT,
-  tool        TEXT NOT NULL,
-  called_at   TEXT NOT NULL DEFAULT (datetime('now')),
-  duration_ms INTEGER DEFAULT 0,
-  tokens_in   INTEGER DEFAULT 0,
-  tokens_out  INTEGER DEFAULT 0,
-  tokens_saved INTEGER DEFAULT 0,
-  repo        TEXT
-);
-
-CREATE INDEX IF NOT EXISTS idx_tool_usage_tool ON tool_usage(tool);
-CREATE INDEX IF NOT EXISTS idx_tool_usage_at   ON tool_usage(called_at);
+-- milens code intelligence database schema
+
+CREATE TABLE IF NOT EXISTS symbols (
+  id    TEXT PRIMARY KEY,
+  name  TEXT NOT NULL,
+  kind  TEXT NOT NULL,
+  file_path   TEXT NOT NULL,
+  start_line  INTEGER,
+  end_line    INTEGER,
+  exported    INTEGER DEFAULT 0,
+  parent_id   TEXT,
+  signature   TEXT,
+  role        TEXT,
+  heat        INTEGER DEFAULT 0
+);
+
+CREATE TABLE IF NOT EXISTS links (
+  id          TEXT PRIMARY KEY,
+  from_id     TEXT NOT NULL,
+  to_id       TEXT NOT NULL,
+  type        TEXT NOT NULL,
+  confidence  REAL DEFAULT 1.0,
+  line_number INTEGER
+);
+
+CREATE TABLE IF NOT EXISTS file_hashes (
+  path        TEXT PRIMARY KEY,
+  hash        TEXT NOT NULL,
+  analyzed_at TEXT NOT NULL DEFAULT (datetime('now')),
+  zone        TEXT
+);
+
+CREATE TABLE IF NOT EXISTS repo_meta (
+  key   TEXT PRIMARY KEY,
+  value TEXT NOT NULL
+);
+
+CREATE TABLE IF NOT EXISTS meta (
+  key   TEXT PRIMARY KEY,
+  value TEXT
+);
+
+CREATE INDEX IF NOT EXISTS idx_symbols_name ON symbols(name);
+CREATE INDEX IF NOT EXISTS idx_symbols_file ON symbols(file_path);
+CREATE INDEX IF NOT EXISTS idx_symbols_kind ON symbols(kind);
+CREATE INDEX IF NOT EXISTS idx_links_from   ON links(from_id);
+CREATE INDEX IF NOT EXISTS idx_links_to     ON links(to_id);
+CREATE INDEX IF NOT EXISTS idx_links_type   ON links(type);
+
+-- FTS5 full-text search on symbol names and paths
+CREATE VIRTUAL TABLE IF NOT EXISTS symbol_fts USING fts5(
+  name,
+  file_path,
+  kind,
+  content='symbols',
+  content_rowid='rowid'
+);
+
+-- Triggers to keep FTS in sync
+CREATE TRIGGER IF NOT EXISTS symbols_ai AFTER INSERT ON symbols BEGIN
+  INSERT INTO symbol_fts(rowid, name, file_path, kind)
+  VALUES (new.rowid, new.name, new.file_path, new.kind);
+END;
+
+CREATE TRIGGER IF NOT EXISTS symbols_ad AFTER DELETE ON symbols BEGIN
+  INSERT INTO symbol_fts(symbol_fts, rowid, name, file_path, kind)
+  VALUES ('delete', old.rowid, old.name, old.file_path, old.kind);
+END;
+
+-- Tool usage tracking for dashboard analytics
+CREATE TABLE IF NOT EXISTS tool_usage (
+  id          INTEGER PRIMARY KEY AUTOINCREMENT,
+  tool        TEXT NOT NULL,
+  called_at   TEXT NOT NULL DEFAULT (datetime('now')),
+  duration_ms INTEGER DEFAULT 0,
+  tokens_in   INTEGER DEFAULT 0,
+  tokens_out  INTEGER DEFAULT 0,
+  tokens_saved INTEGER DEFAULT 0,
+  repo        TEXT
+);
+
+CREATE INDEX IF NOT EXISTS idx_tool_usage_tool ON tool_usage(tool);
+CREATE INDEX IF NOT EXISTS idx_tool_usage_at   ON tool_usage(called_at);