npm - miclaw-app - Versions diffs - 0.1.0 - Mend

miclaw-app 0.1.0

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package/.next/standalone/.next/server/app/settings.html ADDED Viewed

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+<!DOCTYPE html><html lang="en" class="inter_fe8b9d92-module__LINzvG__variable geist_mono_8d43a2aa-module__8Li5zG__variable fira_code_d18ac710-module__OladcG__variable"><head><meta charSet="utf-8"/><meta name="viewport" content="width=device-width, initial-scale=1"/><link rel="preload" href="/_next/static/media/166ab60e98aadb0a-s.p.0mka4ru4_bj1d.woff2" as="font" crossorigin="" type="font/woff2"/><link rel="preload" href="/_next/static/media/797e433ab948586e-s.p.0.q-h669a_dqa.woff2" as="font" crossorigin="" type="font/woff2"/><link rel="preload" href="/_next/static/media/83afe278b6a6bb3c-s.p.0q-301v4kxxnr.woff2" as="font" crossorigin="" type="font/woff2"/><link rel="stylesheet" href="/_next/static/chunks/0iym2_f33sxs7.css" data-precedence="next"/><link rel="preload" as="script" fetchPriority="low" href="/_next/static/chunks/0bzupvr5gt3k9.js"/><script src="/_next/static/chunks/0y3~cortx~or~.js" async=""></script><script src="/_next/static/chunks/0bogtdbh.dcu1.js" async=""></script><script src="/_next/static/chunks/turbopack-06dy8k5p5cegf.js" async=""></script><script src="/_next/static/chunks/0mmpyn9fv2fjf.js" async=""></script><script src="/_next/static/chunks/0d3shmwh5_nmn.js" async=""></script><meta name="next-size-adjust" content=""/><title>MiClaw</title><meta name="description" content="Claude Code configuration visualizer"/><link rel="icon" href="/favicon.ico?favicon.0x3dzn~oxb6tn.ico" sizes="256x256" type="image/x-icon"/><script src="/_next/static/chunks/03~yq9q893hmn.js" noModule=""></script></head><body class="bg-surface text-text font-sans antialiased"><div hidden=""><!--$--><!--/$--></div><div class="flex h-screen overflow-hidden"><nav class="w-16 shrink-0 border-r border-border py-4 flex flex-col items-center gap-2 overflow-visible"><a class="mb-3" style="writing-mode:vertical-lr" href="/"><span class="text-sm font-bold tracking-wider" style="font-family:var(--font-fira-code), monospace"><span class="text-text-muted">Mi</span><span class="text-accent">Claw</span></span></a><a class="relative group w-10 h-10 flex items-center justify-center rounded-md transition-colors
+              text-text-dim hover:text-text hover:bg-surface-hover" href="/"><svg xmlns="http://www.w3.org/2000/svg" width="22" height="22" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-layout-dashboard" aria-hidden="true"><rect width="7" height="9" x="3" y="3" rx="1"></rect><rect width="7" height="5" x="14" y="3" rx="1"></rect><rect width="7" height="9" x="14" y="12" rx="1"></rect><rect width="7" height="5" x="3" y="16" rx="1"></rect></svg><span class="absolute left-full ml-3 px-2.5 py-1 rounded-md bg-surface-raised border border-border text-text text-xs font-medium whitespace-nowrap opacity-0 pointer-events-none group-hover:opacity-100 transition-opacity z-50 shadow-lg">Overview</span></a><a class="relative group w-10 h-10 flex items-center justify-center rounded-md transition-colors
+              text-text-dim hover:text-text hover:bg-surface-hover" href="/agents"><svg xmlns="http://www.w3.org/2000/svg" width="22" height="22" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-bot" aria-hidden="true"><path d="M12 8V4H8"></path><rect width="16" height="12" x="4" y="8" rx="2"></rect><path d="M2 14h2"></path><path d="M20 14h2"></path><path d="M15 13v2"></path><path d="M9 13v2"></path></svg><span class="absolute left-full ml-3 px-2.5 py-1 rounded-md bg-surface-raised border border-border text-text text-xs font-medium whitespace-nowrap opacity-0 pointer-events-none group-hover:opacity-100 transition-opacity z-50 shadow-lg">Agents</span></a><a class="relative group w-10 h-10 flex items-center justify-center rounded-md transition-colors
+              text-text-dim hover:text-text hover:bg-surface-hover" href="/skills"><svg xmlns="http://www.w3.org/2000/svg" width="22" height="22" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-zap" aria-hidden="true"><path d="M4 14a1 1 0 0 1-.78-1.63l9.9-10.2a.5.5 0 0 1 .86.46l-1.92 6.02A1 1 0 0 0 13 10h7a1 1 0 0 1 .78 1.63l-9.9 10.2a.5.5 0 0 1-.86-.46l1.92-6.02A1 1 0 0 0 11 14z"></path></svg><span class="absolute left-full ml-3 px-2.5 py-1 rounded-md bg-surface-raised border border-border text-text text-xs font-medium whitespace-nowrap opacity-0 pointer-events-none group-hover:opacity-100 transition-opacity z-50 shadow-lg">Skills</span></a><a class="relative group w-10 h-10 flex items-center justify-center rounded-md transition-colors
+              text-text-dim hover:text-text hover:bg-surface-hover" href="/commands"><svg xmlns="http://www.w3.org/2000/svg" width="22" height="22" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-terminal" aria-hidden="true"><path d="M12 19h8"></path><path d="m4 17 6-6-6-6"></path></svg><span class="absolute left-full ml-3 px-2.5 py-1 rounded-md bg-surface-raised border border-border text-text text-xs font-medium whitespace-nowrap opacity-0 pointer-events-none group-hover:opacity-100 transition-opacity z-50 shadow-lg">Commands</span></a><a class="relative group w-10 h-10 flex items-center justify-center rounded-md transition-colors
+              text-text-dim hover:text-text hover:bg-surface-hover" href="/mcp"><svg xmlns="http://www.w3.org/2000/svg" width="22" height="22" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-plug" aria-hidden="true"><path d="M12 22v-5"></path><path d="M15 8V2"></path><path d="M17 8a1 1 0 0 1 1 1v4a4 4 0 0 1-4 4h-4a4 4 0 0 1-4-4V9a1 1 0 0 1 1-1z"></path><path d="M9 8V2"></path></svg><span class="absolute left-full ml-3 px-2.5 py-1 rounded-md bg-surface-raised border border-border text-text text-xs font-medium whitespace-nowrap opacity-0 pointer-events-none group-hover:opacity-100 transition-opacity z-50 shadow-lg">MCP Servers</span></a><a class="relative group w-10 h-10 flex items-center justify-center rounded-md transition-colors
+              text-text-dim hover:text-text hover:bg-surface-hover" href="/hooks"><svg xmlns="http://www.w3.org/2000/svg" width="22" height="22" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-webhook" aria-hidden="true"><path d="M18 16.98h-5.99c-1.1 0-1.95.94-2.48 1.9A4 4 0 0 1 2 17c.01-.7.2-1.4.57-2"></path><path d="m6 17 3.13-5.78c.53-.97.1-2.18-.5-3.1a4 4 0 1 1 6.89-4.06"></path><path d="m12 6 3.13 5.73C15.66 12.7 16.9 13 18 13a4 4 0 0 1 0 8"></path></svg><span class="absolute left-full ml-3 px-2.5 py-1 rounded-md bg-surface-raised border border-border text-text text-xs font-medium whitespace-nowrap opacity-0 pointer-events-none group-hover:opacity-100 transition-opacity z-50 shadow-lg">Hooks</span></a><a class="relative group w-10 h-10 flex items-center justify-center rounded-md transition-colors
+              text-accent bg-surface-raised" href="/settings"><svg xmlns="http://www.w3.org/2000/svg" width="22" height="22" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-shield" aria-hidden="true"><path d="M20 13c0 5-3.5 7.5-7.66 8.95a1 1 0 0 1-.67-.01C7.5 20.5 4 18 4 13V6a1 1 0 0 1 1-1c2 0 4.5-1.2 6.24-2.72a1.17 1.17 0 0 1 1.52 0C14.51 3.81 17 5 19 5a1 1 0 0 1 1 1z"></path></svg><span class="absolute left-full ml-3 px-2.5 py-1 rounded-md bg-surface-raised border border-border text-text text-xs font-medium whitespace-nowrap opacity-0 pointer-events-none group-hover:opacity-100 transition-opacity z-50 shadow-lg">Settings</span></a><a class="relative group w-10 h-10 flex items-center justify-center rounded-md transition-colors
+              text-text-dim hover:text-text hover:bg-surface-hover" href="/rules"><svg xmlns="http://www.w3.org/2000/svg" width="22" height="22" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-file-text" aria-hidden="true"><path d="M6 22a2 2 0 0 1-2-2V4a2 2 0 0 1 2-2h8a2.4 2.4 0 0 1 1.704.706l3.588 3.588A2.4 2.4 0 0 1 20 8v12a2 2 0 0 1-2 2z"></path><path d="M14 2v5a1 1 0 0 0 1 1h5"></path><path d="M10 9H8"></path><path d="M16 13H8"></path><path d="M16 17H8"></path></svg><span class="absolute left-full ml-3 px-2.5 py-1 rounded-md bg-surface-raised border border-border text-text text-xs font-medium whitespace-nowrap opacity-0 pointer-events-none group-hover:opacity-100 transition-opacity z-50 shadow-lg">Rules</span></a></nav><main class="flex-1 overflow-y-auto bg-grid"><div class="mx-auto max-w-5xl px-8 py-10"><div class="mb-8"><div class="flex items-baseline gap-3"><h1 class="text-2xl font-medium tracking-tight">Settings</h1></div><p class="mt-1 text-sm text-text-muted">Global settings, keybindings, and per-project permissions</p></div><div class="mb-8"><h2 class="text-xs font-medium text-text-dim uppercase tracking-wide mb-3">Global Settings</h2><div class="border border-border rounded-sm p-5 "><div class="space-y-1"><div class="flex gap-3 text-sm"><span class="text-text-muted font-mono">autoUpdatesChannel</span><span class="text-text-dim font-mono break-all">latest</span></div></div></div></div><div><h2 class="text-xs font-medium text-text-dim uppercase tracking-wide mb-3">Project Permissions</h2><div class="space-y-6"><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">Desktop</h3><span class="text-xs text-text-dim">198<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(grep:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm exec nx run:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm exec nx:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(nx run:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run ruff check:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(find:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tree:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tofu fmt:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git checkout:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gfgp)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tofu validate:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git fetch:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git pull:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr view:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr diff:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx nx run-many:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run pytest:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(python3 -m py_compile:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npm run test-all:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run basedpyright:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(ls:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(xargs:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv sync)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(python3:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npm create:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npm install)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npm install:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx tsc:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npm run build:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(AWS_PROFILE=dev aws glue:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(AWS_PROFILE=dev aws s3 ls:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(AWS_PROFILE=dev aws s3tables:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(AWS_PROFILE=dev aws:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pip3 install:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(/Users/gabry/Desktop/.venv/bin/pip install:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(/Users/gabry/Desktop/.venv/bin/python:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh api:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run ruff format:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run pyright:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx pyright:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv sync:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(wc:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git reset:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git grep:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(python:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(poetry run pytest:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(poetry run basedpyright:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm exec basedpyright:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/ruff check packages/wgs_validations/src packages/wgs_validations/tests)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/basedpyright:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/pytest tests/validation/test_notebook_utils.py -v)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/pytest packages/wgs_validations/tests/validation/test_notebook_utils.py -v)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tofu init:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm lint:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm tsc:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr checkout:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(done)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(for:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(do echo &quot;=== $dir ===&quot; grep -l &quot;PatientEvent&quot; &quot;$dir/src&quot;/*/*.py)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(while read f)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(do echo &quot;File: $f&quot; grep -B2 -A15 &quot;handle_patient&quot; &quot;$f&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm --filter bioscope_types fmt:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm run fmt:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm run lint:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm run typecheck:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pdftotext:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(cat:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(do jq -r &#x27;.tiles[] | select\(.condition\) | .condition&#x27; &quot;$f&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pntml exec nx run patient-data-service:test:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(/tmp/pptx_venv/bin/python3:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.pptx_venv/bin/python3:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(source:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(chmod +x:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(cd ~/Desktop/wgs-ingestion-claude-bot &amp;&amp; bash run.sh 2&gt;&amp;1)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(file:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(printf:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(claude mcp:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(cd:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/python:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(/Users/gabry/Desktop/wgs-ingestion-claude-bot/.venv/bin/pip list 2&gt;/dev/null || /Users/gabry/Desktop/wgs-ingestion-claude-bot/.venv/bin/python -m pip list 2&gt;/dev/null)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh search:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools query:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tabix:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools view:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(grep ^##FILTER:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(head:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gzcat /Users/gabry/Desktop/DUL8334G.vcf.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools stats:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(zcat:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools index /Users/gabry/Desktop/DURU6786.vcf.gz 2&gt;&amp;1 &amp;&amp; bcftools query -f &#x27;%CHROM\\t%POS\\t%ID\\t%REF\\t%ALT\\t%FILTER\\t[%GT\\t%DP\\t%GQ]\\n&#x27; /Users/gabry/Desktop/DURU6786.vcf.gz -r chr19:44908684-44908684,chr19:44908822-44908822 2&gt;&amp;1)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tail:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx eslint:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(/tmp/dp_venv/bin/python3:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(for cmd:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm exec:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(which bcftools:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo &quot;=== HG00096 PASS at DP&gt;=10 ===&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo &quot;=== DURU6786 PASS at DP&gt;=10 ===&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(find /Users/gabry/Desktop/SNP_PANEL_PROJECT -type f \\\(-name *.py -o -name *.ts -o -name *.js -o -name *.json \\\))</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(du -sh /Users/gabry/Desktop/SNP_PANEL_PROJECT/*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/python3 -c &quot;
+import json
+path = &#x27;packages/genomics_wgs_query_service/src/genomics_wgs_query_service/genetic_features/data/snp_panels/methylation_b_vitamins.json&#x27;
+with open\(path\) as f:
+    data = json.load\(f\)
+for v in data[&#x27;variants&#x27;]:
+    v.pop\(&#x27;position_grch38&#x27;, None\)
+    v.pop\(&#x27;ref_alt_plus_strand&#x27;, None\)
+    gi = v.get\(&#x27;genotype_interpretations&#x27;, {}\)
+    for key in gi:
+        gi[key].pop\(&#x27;label&#x27;, None\)
+        gi[key].pop\(&#x27;enzyme_activity&#x27;, None\)
+with open\(path, &#x27;w&#x27;\) as f:
+    json.dump\(data, f, indent=2\)
+    f.write\(&#x27;\\n&#x27;\)
+print\(&#x27;Done - stripped fields from&#x27;, len\(data[&#x27;variants&#x27;]\), &#x27;variants&#x27;\)
+&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx nx:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gzcat /Users/gabry/Desktop/data_tecnica/Freeze_1-weights_and_variants/PGS000765_hmPOS_GRCh38.txt.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bash /Users/gabry/Desktop/prs-intermediate-analysis/extract_1kg_eur_af.sh)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/python3 -c &quot;
+for path in [
+    &#x27;packages/genomics_wgs_query_service/tests/test_handlers_get_genetic_features.py&#x27;,
+]:
+    with open\(path\) as f:
+        content = f.read\(\)
+    content = content.replace\(&#x27;_enrich_genetic_features&#x27;, &#x27;enrich_genetic_features&#x27;\)
+    content = content.replace\(&#x27;enrich_genetic_features,  # pyright: ignore[reportPrivateUsage]&#x27;, &#x27;enrich_genetic_features,&#x27;\)
+    with open\(path, &#x27;w&#x27;\) as f:
+        f.write\(content\)
+    print\(f&#x27;Fixed {path}&#x27;\)
+&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/python3 -c &quot;
+for path in [
+    &#x27;packages/genomics_wgs_query_service/src/genomics_wgs_query_service/handlers/get_genetic_features.py&#x27;,
+    &#x27;packages/genomics_wgs_query_service/tests/test_handlers_get_genetic_features.py&#x27;,
+]:
+    with open\(path\) as f:
+        content = f.read\(\)
+    content = content.replace\(&#x27;_enrich_variant&#x27;, &#x27;enrich_variant&#x27;\)
+    content = content.replace\(&#x27;enrich_variant,  # pyright: ignore[reportPrivateUsage]&#x27;, &#x27;enrich_variant,&#x27;\)
+    with open\(path, &#x27;w&#x27;\) as f:
+        f.write\(content\)
+    print\(f&#x27;Fixed {path}&#x27;\)
+&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(.venv/bin/python3 -c &quot;
+path = &#x27;packages/genomics_wgs_query_service/tests/test_handlers_get_genetic_features_for_patient.py&#x27;
+with open\(path\) as f:
+    content = f.read\(\)
+content = content.replace\(&#x27;_enrich_genetic_features&#x27;, &#x27;enrich_genetic_features&#x27;\)
+with open\(path, &#x27;w&#x27;\) as f:
+    f.write\(content\)
+print\(&#x27;Done&#x27;\)
+&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(export AWS_PROFILE=dev)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(aws lambda:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gzcat /Users/gabry/Desktop/PRS_INVESTIGATION/data_tecnica/Freeze_1-weights_and_variants/PGS000024_hmPOS_GRCh38.txt.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gzcat /Users/gabry/Desktop/PRS_INVESTIGATION/analysis/1kg_scores/036f110e-e8b8-4024-bbf4-2827a1aa1d6f/HG00343_prs_scores.json.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(grep -r .create\\\(/Users/gabry/Desktop/platform-services/packages/cmbio_sync_service/src --include=*.py -B 3 -A 3)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm lint:all)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm sync-schema:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gunzip -c ~/Desktop/DUL8334G_diagnostics/SAMPLE/match/SAMPLE_log.csv.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gunzip -c ~/Desktop/DUL8334G_diagnostics/SAMPLE/score/SAMPLE_pgs.txt.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gunzip -c ~/Desktop/DUL8334G_diagnostics/SAMPLE/score/SAMPLE_popsimilarity.txt.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gunzip -c ~/Desktop/DUL8334G_diagnostics/SAMPLE/score/SAMPLE_info.json.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gunzip -c ~/Desktop/DUL8334G_diagnostics/SAMPLE/match/SAMPLE_ALL_additive_0.scorefile.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gunzip -c ~/Desktop/DUL8334G_diagnostics/SAMPLE/match/SAMPLE_ALL_additive_1.scorefile.gz)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(AWS_PROFILE=prod-admin aws s3 ls --recursive s3://bioscope-prod-genomics-gxg-shared/8ecc523a-6232-4397-ad39-f6a92ba32ab8/)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo &quot;---EXIT:$?&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(AWS_PROFILE=prod-admin aws s3 ls --recursive s3://bioscope-prod-genomics-clinvar-xml-blocks/8ecc523a-6232-4397-ad39-f6a92ba32ab8/)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(AWS_PROFILE=prod-admin aws s3 ls --recursive s3://bioscope-prod-platform-files/8ecc523a-6232-4397-ad39-f6a92ba32ab8/)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(AWS_PROFILE=prod-admin aws s3 cp:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx create-next-app@latest MiClaw --typescript --tailwind --app --src-dir --eslint --no-turbopack --use-npm --import-alias &quot;@/*&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx create-next-app@latest miclaw --typescript --tailwind --app --src-dir --eslint --no-turbopack --use-npm --import-alias &quot;@/*&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bun --version)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s &quot;https://api.github.com/search/repositories?q=claude+code+config+manager&amp;sort=stars&amp;order=desc&amp;per_page=10&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(rm -rf node_modules package-lock.json)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bun install:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s &quot;https://api.github.com/search/repositories?q=claude+code+dashboard+UI&amp;sort=stars&amp;order=desc&amp;per_page=10&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s &quot;https://api.github.com/search/repositories?q=claude+code+settings+GUI&amp;sort=stars&amp;order=desc&amp;per_page=10&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s &quot;https://api.github.com/search/repositories?q=CLAUDE.md+manager&amp;sort=stars&amp;order=desc&amp;per_page=10&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s &quot;https://api.github.com/search/repositories?q=claude+code+admin+panel+web&amp;sort=stars&amp;order=desc&amp;per_page=10&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s &quot;https://api.github.com/search/repositories?q=claude+code+MCP+server+manager+visual&amp;sort=stars&amp;order=desc&amp;per_page=10&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s &quot;https://api.github.com/search/repositories?q=%22claude+code%22+configuration+web+interface&amp;sort=stars&amp;order=desc&amp;per_page=10&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s &quot;https://api.github.com/search/repositories?q=%22claude+code%22+hooks+skills+editor&amp;sort=stars&amp;order=desc&amp;per_page=10&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bun run:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bun add:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pkill -f &quot;next dev&quot;)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s http://localhost:3000)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s http://localhost:3000/mcp)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s http://localhost:3000/hooks)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(curl -s http://localhost:3000/agents)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx next:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bunx tsc:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(node -e &#x27;:*)</p></div></div><div><p class="text-xs text-text-dim mb-1">Read</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Read(//tmp/**)</p></div></div><div><p class="text-xs text-text-dim mb-1">Skill</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Skill(review)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Skill(fix-tests)</p></div></div><div><p class="text-xs text-text-dim mb-1">WebFetch</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:github.com)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:raw.githubusercontent.com)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:search.clinicalgenome.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:www.notion.so)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:boto3.amazonaws.com)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:api.crossref.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:uploads.linear.app)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:axiom.co)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:pgsc-calc.readthedocs.io)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:journals.plos.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:doi.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:aacrjournals.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:iovs.arvojournals.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:www.pgscatalog.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:pubmed.ncbi.nlm.nih.gov)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:discuss.gnomad.broadinstitute.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:storage.googleapis.com)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:ftp.1000genomes.ebi.ac.uk)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:zenodo.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:registry.opendata.aws)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:bioconductor.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:pmc.ncbi.nlm.nih.gov)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:pygscatalog.readthedocs.io)</p></div></div><div><p class="text-xs text-text-dim mb-1">WebSearch</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebSearch</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__axiom__checkMonitors</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__checkMonitors</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__axiom__listDashboards</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__listDashboards</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__axiom__queryDataset</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__queryDataset</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__claude_ai_Context7__resolve</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Context7__resolve-library-id</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__claude_ai_Linear_2__get_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Linear_2__get_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__create_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__create_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__create_issue_label</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__create_issue_label</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__create_project</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__create_project</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__get_attachment</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__get_attachment</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__get_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__get_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__get_project</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__get_project</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_issue_labels</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_issue_labels</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_issues</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_issues</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_projects</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_projects</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_teams</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_teams</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_users</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_users</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__save_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__save_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__update_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__update_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__notion__notion</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__notion__notion-fetch</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__notion__notion-update-page</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__notion__notion-search</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">dhl-visualizer</h3><span class="text-xs text-text-dim">2<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npm run build:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npm install:*)</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">ROADMAP_2026</h3><span class="text-xs text-text-dim">4<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(open:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(lsof:*)</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__axiom__getDashboard</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__getDashboard</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__get_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__get_issue</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">infrastructure</h3><span class="text-xs text-text-dim">10<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(find:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tofu fmt:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tofu validate:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(mkdir:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tofu init:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr view:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr diff:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(grep:*)</p></div></div><div><p class="text-xs text-text-dim mb-1">WebSearch</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebSearch</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__get_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__get_issue</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">blood_typing/results</h3><span class="text-xs text-text-dim">5<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools view:*)</p></div></div><div><p class="text-xs text-text-dim mb-1">WebFetch</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:www.ncbi.nlm.nih.gov)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:gnomad.broadinstitute.org)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:search.clinicalgenome.org)</p></div></div><div><p class="text-xs text-text-dim mb-1">WebSearch</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebSearch</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">platform-services</h3><span class="text-xs text-text-dim">34<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm exec nx run:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(cat:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gunzip:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(grep:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run ruff check:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run python:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(find:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(xargs:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr diff:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr list:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr view:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tree:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(claude mcp add:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run ruff:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(ruff format:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(python -m pytest:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git -C /Users/gabry/Desktop/platform-services status packages/microbiome_service/)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run pyright:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git checkout:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(terraform fmt:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(linear issue create:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(npx linear --help:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(done)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(cd:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(python3:*)</p></div></div><div><p class="text-xs text-text-dim mb-1">WebFetch</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:www.ncbi.nlm.nih.gov)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebFetch(domain:github.com)</p></div></div><div><p class="text-xs text-text-dim mb-1">WebSearch</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">WebSearch</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__axiom__queryDataset</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__queryDataset</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__create_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__create_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__get_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__get_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_issue_labels</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_issue_labels</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_teams</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_teams</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">wgs_validations</h3><span class="text-xs text-text-dim">14<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tail:)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo === filteredVcf stats ===:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo === processedVcf stats ===:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo === invalidVcf stats ===:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo === filteredVcf ===:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo === processedVcf ===:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo === invalidVcf ===:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools stats:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools view:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(echo === filteredVcf updated contigs ===:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools query:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tail:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(grep:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run:*)</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">platform-services</h3><span class="text-xs text-text-dim">13<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr view:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr diff:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm --version:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm exec nx run scripts:lint:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm exec nx run:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(unzip:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run ruff:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools query:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(bcftools view:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(zcat:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(head:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(python3:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(uv run:*)</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">web-app</h3><span class="text-xs text-text-dim">13<!-- --> allow</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Bash</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(ls:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm lint:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm tsc:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(find:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(pnpm lint:check:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git fetch:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git pull:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr view:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(gh pr diff:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(git checkout:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(python3:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(head:*)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash(tail:*)</p></div></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Project Shared</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">User Global</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">~/.claude/settings.json</p></div></div></div></div></div></div><div class="border border-border rounded-sm p-5 "><div class="flex items-baseline justify-between mb-4"><h3 class="text-sm font-medium">wgs-ingestion-bot</h3><span class="text-xs text-text-dim">31<!-- --> allow<!-- -->, 14 deny</span></div><div class="grid grid-cols-1 lg:grid-cols-3 gap-6"><div class="lg:col-span-2"><div class="space-y-3"><div><p class="text-xs text-text-dim mb-1">Edit</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Edit(path:/Users/gabry/Desktop/wgs-ingestion-bot/**)</p></div></div><div><p class="text-xs text-text-dim mb-1">Glob</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Glob(path:/Users/gabry/Desktop/platform-services/**)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Glob(path:/Users/gabry/Desktop/infrastructure/**)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Glob(path:/Users/gabry/Desktop/wgs-ingestion-bot/**)</p></div></div><div><p class="text-xs text-text-dim mb-1">Grep</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Grep(path:/Users/gabry/Desktop/platform-services/**)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Grep(path:/Users/gabry/Desktop/infrastructure/**)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Grep(path:/Users/gabry/Desktop/wgs-ingestion-bot/**)</p></div></div><div><p class="text-xs text-text-dim mb-1">Read</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Read(path:/Users/gabry/Desktop/platform-services/**)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Read(path:/Users/gabry/Desktop/infrastructure/**)</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Read(path:/Users/gabry/Desktop/wgs-ingestion-bot/**)</p></div></div><div><p class="text-xs text-text-dim mb-1">Write</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Write(path:/Users/gabry/Desktop/wgs-ingestion-bot/reports/**)</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__axiom__checkMonitors</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__checkMonitors</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__checkMonitors</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__axiom__getMonitorHistory</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__getMonitorHistory</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__getMonitorHistory</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__axiom__queryDataset</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__queryDataset</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__axiom__queryDataset</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__get_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__get_issue</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__get_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_issues</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_issues</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_issues</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_teams</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_teams</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_teams</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__list_users</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_users</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__list_users</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__linear__save_issue</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__save_issue</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__save_issue</p></div></div><div><p class="text-xs text-text-dim mb-1">mcp__slack</p><div class="space-y-0.5"><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__slack-wgs__slack_reply</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__slack-wgs__slack_upload_report</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__slack-wgs__slack_reply</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__slack-wgs__slack_upload_report</p></div></div><div class="mt-4 pt-3 border-t border-border"><p class="text-xs text-accent mb-1">Denied</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__save_comment</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_send_message</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_send_message_draft</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_schedule_message</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_create_canvas</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_update_canvas</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">Bash</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__linear__save_comment</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_send_message</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_send_message_draft</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_schedule_message</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_create_canvas</p><p class="text-xs font-mono text-text-muted pl-3 leading-relaxed">mcp__claude_ai_Slack__slack_update_canvas</p></div></div></div><div><p class="text-xs text-text-dim mb-2">Settings Priority</p><div class="flex flex-col gap-0"><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">Enterprise</span></div><p class="text-xs font-mono text-text-dim">managed-settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-surface-raised"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text-dim">CLI Flag</span></div><p class="text-xs font-mono text-text-dim">--settings</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Local</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.local.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div><div class="w-px flex-1 bg-border-strong"></div></div><div class="pb-3 pl-3"><div class="flex items-center gap-2"><span class="text-xs font-medium text-text">Project Shared</span><span class="inline-flex items-center px-2 py-0.5 text-xs font-medium rounded-sm bg-accent/15 text-accent">active</span></div><p class="text-xs font-mono text-text-dim">.claude/settings.json</p></div></div><div class="flex items-stretch"><div class="flex flex-col items-center w-5 shrink-0"><div class="w-2 h-2 rounded-full shrink-0 mt-2.5 bg-accent"></div></div><div class="pb-3 pl-3"><div class="flex items-center 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text-text-muted pl-3 leading-relaxed\",\"children\":\"Bash(npx nx:*)\"}]\n66:[\"$\",\"p\",\"104\",{\"className\":\"text-xs font-mono text-text-muted pl-3 leading-relaxed\",\"children\":\"Bash(gzcat /Users/gabry/"])</script><script>self.__next_f.push([1,"Desktop/data_tecnica/Freeze_1-weights_and_variants/PGS000765_hmPOS_GRCh38.txt.gz)\"}]\n67:[\"$\",\"p\",\"105\",{\"className\":\"text-xs font-mono text-text-muted pl-3 leading-relaxed\",\"children\":\"Bash(bash /Users/gabry/Desktop/prs-intermediate-analysis/extract_1kg_eur_af.sh)\"}]\n68:[\"$\",\"p\",\"106\",{\"className\":\"text-xs font-mono text-text-muted pl-3 leading-relaxed\",\"children\":\"Bash(.venv/bin/python3 -c \\\"\\nfor path in [\\n    'packages/genomics_wgs_query_service/tests/test_handlers_get_genetic_features.py',\\n]:\\n    with open\\\\(path\\\\) as f:\\n        content = f.read\\\\(\\\\)\\n    content = content.replace\\\\('_enrich_genetic_features', 'enrich_genetic_features'\\\\)\\n    content = content.replace\\\\('enrich_genetic_features,  # pyright: ignore[reportPrivateUsage]', 'enrich_genetic_features,'\\\\)\\n    with open\\\\(path, 'w'\\\\) as f:\\n        f.write\\\\(content\\\\)\\n    print\\\\(f'Fixed {path}'\\\\)\\n\\\")\"}]\n69:[\"$\",\"p\",\"107\",{\"className\":\"text-xs font-mono text-text-muted pl-3 leading-relaxed\",\"children\":\"Bash(.venv/bin/python3 -c \\\"\\nfor path in [\\n    'packages/genomics_wgs_query_service/src/genomics_wgs_query_service/handlers/get_genetic_features.py',\\n    'packages/genomics_wgs_query_service/tests/test_handlers_get_genetic_features.py',\\n]:\\n    with open\\\\(path\\\\) as f:\\n        content = f.read\\\\(\\\\)\\n    content = content.replace\\\\('_enrich_variant', 'enrich_variant'\\\\)\\n    content = content.replace\\\\('enrich_variant,  # pyright: ignore[reportPrivateUsage]', 'enrich_variant,'\\\\)\\n    with open\\\\(path, 'w'\\\\) as f:\\n        f.write\\\\(content\\\\)\\n    print\\\\(f'Fixed 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