mcp-store-db 0.1.0

package/README.md

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+# mcp-store-db
+
+A lightweight vector database and RAG storage layer for Node.js. Supports document ingestion, chunking, embedding, and semantic search — all file-based with zero external database dependencies.
+
+## Installation
+
+```bash
+npm install mcp-store-db
+```
+
+## Quick Start
+
+```typescript
+import MiniVectorDatabase from 'mcp-store-db';
+
+const db = new MiniVectorDatabase({
+  location: './data',
+  name: 'my-store',
+  chunkConfiguration: {
+    overlap: 0,
+    size: 500,
+    separators: ['\n\n', '\n', '. ', ' '],
+  },
+  vectorConfigurations: {
+    cacheDir: './models',
+    searchLimit: 5,
+    model: 'Xenova/all-MiniLM-L6-v2',
+  },
+});
+
+// Initialize (downloads model on first run)
+await db.init();
+
+// Ingest a document (supports .txt, .pdf, .csv)
+const docId = await db.ingest('./documents/example.txt');
+
+// Semantic search
+const results = await db.query('what is machine learning');
+console.log(results);
+// [{ content: '...', score: 0.82, chunkId: '...', documentId: '...' }]
+
+// List all documents
+const docs = await db.listDoc();
+
+// Get a specific document
+const doc = await db.getDoc('document-id');
+
+// Delete a document (cascades to chunks and vectors)
+await db.deleteDoc('document-id');
+```
+
+## How It Works
+
+```
+Ingest: File → Document Store → Chunk Store → Vector Store (embeddings)
+Query:  Text → Embed → Cosine Similarity Search → Return ranked chunks
+```
+
+The library runs a three-layer pipeline:
+
+1. **Document Store** — stores raw documents with metadata as JSON files
+2. **Chunk Store** — splits documents into smaller segments using recursive chunking
+3. **Vector Store** — generates embeddings using [Xenova/transformers](https://github.com/xenova/transformers.js) and performs cosine similarity search
+
+All data is stored as JSON files on disk. No database server required.
+
+## API
+
+### `new MiniVectorDatabase(props)`
+
+| Property | Type | Description |
+|----------|------|-------------|
+| `location` | `string` | Directory path for storing data |
+| `name` | `string` | Name of the database instance |
+| `chunkConfiguration.size` | `number` | Maximum chunk size in characters |
+| `chunkConfiguration.overlap` | `number` | Character overlap between chunks |
+| `chunkConfiguration.separators` | `string[]` | Split boundaries in priority order |
+| `vectorConfigurations.cacheDir` | `string` | Directory to cache the embedding model |
+| `vectorConfigurations.searchLimit` | `number` | Max results returned by `query()` |
+| `vectorConfigurations.model` | `SupportedModels` | Embedding model name |
+
+### Methods
+
+| Method | Returns | Description |
+|--------|---------|-------------|
+| `init()` | `Promise<void>` | Initialize stores and load embedding model |
+| `ingest(filePath)` | `Promise<string \| string[] \| null>` | Ingest a file (.txt, .pdf, .csv) and return document ID(s) |
+| `query(text)` | `Promise<QueryResult[]>` | Semantic search — returns ranked chunks with scores |
+| `listDoc()` | `Promise<DocumentType[]>` | List all documents |
+| `getDoc(id)` | `Promise<DocumentType \| undefined>` | Get a document by ID |
+| `deleteDoc(id)` | `Promise<void>` | Delete a document and its chunks/vectors |
+
+### Events
+
+The class extends `EventEmitter` and emits:
+
+| Event | Values | Description |
+|-------|--------|-------------|
+| `status` | `'in-progress'`, `'ready'` | Initialization status |
+| `ingest` | `'in-progress'`, `'done'` | Ingestion progress |
+| `query` | `'in-progress'`, `'done'` | Query progress |
+| `delete` | `'in-progress'`, `'done'` | Deletion progress |
+| `error` | `string` | Error message |
+
+### Exported Types
+
+```typescript
+import MiniVectorDatabase, {
+  type MiniVectorDatabaseProps,
+  type QueryResult,
+  type DocumentType,
+  type SupportedModels,
+} from 'mcp-store-db';
+```
+
+## Supported File Types
+
+- `.txt` — Plain text files
+- `.pdf` — PDF documents
+- `.csv` — CSV files (requires `content` and `metadata` columns)
+
+## Supported Models
+
+- `Xenova/all-MiniLM-L6-v2` — 384-dimensional embeddings, good balance of speed and quality
+
+## Requirements
+
+- Node.js >= 18
+- ESM project (`"type": "module"` in package.json)
+
+## License
+
+MIT

package/dist/index.d.ts

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+import { type DocumentType } from './storage/documentStore.js';
+import { EventEmitter } from 'node:events';
+export type SupportedModels = 'Xenova/all-MiniLM-L6-v2';
+export type QueryResult = {
+    content: string;
+    score: number;
+    chunkId: string;
+    documentId: string;
+};
+export type MiniVectorDatabaseProps = {
+    location: string;
+    name: string;
+    chunkConfiguration: {
+        overlap: number;
+        size: number;
+        separators: string[];
+    };
+    vectorConfigurations: {
+        cacheDir: string;
+        searchLimit: number;
+        model: SupportedModels;
+    };
+};
+declare class MiniVectorDatabase extends EventEmitter {
+    location: string;
+    name: string;
+    chunkConfiguration: {
+        overlap: number;
+        size: number;
+        separators: string[];
+    };
+    vectorConfigurations: {
+        cacheDir: string;
+        searchLimit: number;
+        model: SupportedModels;
+    };
+    private doc;
+    private chunk;
+    private vector;
+    isReady: boolean;
+    constructor({ location, name, chunkConfiguration, vectorConfigurations, }: MiniVectorDatabaseProps);
+    init(): Promise<void>;
+    ingest(filePath: string): Promise<string | string[] | null>;
+    query(text: string): Promise<QueryResult[]>;
+    deleteDoc(id: string): Promise<void>;
+    listDoc(): Promise<DocumentType[]>;
+    getDoc(id: string): Promise<DocumentType | undefined>;
+}
+export { type DocumentType };
+export default MiniVectorDatabase;
+//# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

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package/dist/index.js

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+import DocumentStore, {} from './storage/documentStore.js';
+import Chunkstore from './storage/chunkStore.js';
+import VectorStore from './storage/vectorStore.js';
+import { EventEmitter } from 'node:events';
+import { extractErrorMessage } from './utils/extract_error_message.js';
+import checkFileType from './utils/mime_check.js';
+class MiniVectorDatabase extends EventEmitter {
+    location;
+    name;
+    chunkConfiguration;
+    vectorConfigurations;
+    doc;
+    chunk;
+    vector;
+    isReady;
+    constructor({ location, name, chunkConfiguration, vectorConfigurations, }) {
+        super();
+        this.location = location;
+        this.name = name;
+        this.chunkConfiguration = chunkConfiguration;
+        this.vectorConfigurations = vectorConfigurations;
+        this.isReady = false;
+    }
+    async init() {
+        try {
+            this.emit('status', 'in-progress');
+            this.doc = new DocumentStore({
+                location: this.location,
+                name: this.name,
+            });
+            await this.doc.init();
+            this.chunk = new Chunkstore({
+                location: this.location,
+                document: this.doc,
+                name: this.name,
+                chunk_overlap: this.chunkConfiguration.overlap || 0,
+                chunk_size: this.chunkConfiguration.size || 500,
+                separators: this.chunkConfiguration.separators || [
+                    '\n\n',
+                    '\n',
+                    '. ',
+                    ' ',
+                ],
+            });
+            await this.chunk.init();
+            this.vector = new VectorStore({
+                location: this.location,
+                cacheDir: this.vectorConfigurations.cacheDir || './models',
+                name: this.name,
+                chunk: this.chunk,
+                searchlimit: this.vectorConfigurations.searchLimit || 5,
+            });
+            await this.vector.init(this.vectorConfigurations.model || 'Xenova/all-MiniLM-L6-v2');
+            this.emit('status', 'ready');
+            this.isReady = true;
+        }
+        catch (error) {
+            this.emit('error', extractErrorMessage(error));
+            console.error(error);
+            throw error;
+        }
+    }
+    async ingest(filePath) {
+        try {
+            if (!this.isReady)
+                throw new Error('Vector Db not ready');
+            this.emit('ingest', 'in-progress');
+            const file_type = checkFileType(filePath);
+            let dataid = null;
+            if (file_type === 'Text File') {
+                dataid = await this.doc.textInjector(filePath);
+            }
+            else if (file_type === 'PDF File') {
+                dataid = await this.doc.pdfInjector(filePath);
+            }
+            else if (file_type === 'CSV File') {
+                dataid = await this.doc.csvInjector(filePath);
+            }
+            else {
+                throw new Error('File type not supported');
+            }
+            if (!dataid)
+                throw new Error('Parser failed');
+            let chunks = [];
+            if (Array.isArray(dataid)) {
+                chunks = await this.chunk.addMultiple({ documentId: dataid });
+            }
+            else if (dataid) {
+                chunks = await this.chunk.add({ documentId: dataid });
+            }
+            if (chunks?.length) {
+                await this.vector.embeddIds({ chunkId: chunks });
+                this.emit('ingest', 'done');
+                return dataid;
+            }
+            return null;
+        }
+        catch (error) {
+            this.emit('error', extractErrorMessage(error));
+            console.error(error);
+            throw error;
+        }
+    }
+    async query(text) {
+        try {
+            if (!this.isReady)
+                throw new Error('Vector Db not ready');
+            this.emit('query', 'in-progress');
+            const data = await this.vector.searchVectors(text);
+            if (!data)
+                return [];
+            const result = await Promise.all(data.map(async (item) => {
+                const [chunkId, score] = item;
+                const chunk = await this.chunk.get(chunkId);
+                if (!chunk)
+                    throw new Error(`Data integrity error: chunk not found for id ${chunkId}`);
+                return {
+                    content: chunk.content,
+                    score,
+                    chunkId,
+                    documentId: chunk.documentId,
+                };
+            }));
+            this.emit('query', 'done');
+            return result;
+        }
+        catch (error) {
+            this.emit('error', extractErrorMessage(error));
+            console.error(error);
+            throw error;
+        }
+    }
+    async deleteDoc(id) {
+        try {
+            if (!this.isReady)
+                throw new Error('Vector Db not ready');
+            this.emit('delete', 'in-progress');
+            await this.doc.deleteItem(id);
+            const chunks = (await this.chunk.list()).filter((item) => item.documentId === id);
+            await this.chunk.deleteMultipleItem(chunks);
+            await this.vector.deleteMultipleItem(chunks);
+            this.emit('delete', 'done');
+        }
+        catch (error) {
+            this.emit('error', extractErrorMessage(error));
+            console.error(error);
+            throw error;
+        }
+    }
+    async listDoc() {
+        try {
+            if (!this.isReady)
+                throw new Error('Vector Db not ready');
+            const docs = this.doc.list();
+            return docs;
+        }
+        catch (error) {
+            this.emit('error', extractErrorMessage(error));
+            console.error(error);
+            throw error;
+        }
+    }
+    async getDoc(id) {
+        try {
+            if (!this.isReady)
+                throw new Error('Vector Db not ready');
+            const doc = this.doc.get(id);
+            return doc;
+        }
+        catch (error) {
+            this.emit('error', extractErrorMessage(error));
+            console.error(error);
+            throw error;
+        }
+    }
+}
+export {};
+export default MiniVectorDatabase;
+//# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -0,0 +1 @@
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package/dist/storage/chunkStore.d.ts

@@ -0,0 +1,44 @@
+import type DocumentStore from './documentStore.js';
+type Props = {
+    location: string;
+    name: string;
+    chunk_size: number;
+    chunk_overlap: number;
+    separators: string[];
+    document: DocumentStore;
+};
+export type ChunkType = {
+    id: string;
+    content: string;
+    documentId: string;
+    index: number;
+};
+type ChunkTypeRequest = {
+    documentId: string;
+};
+type ChunkTypeRequestMultiple = {
+    documentId: string[];
+};
+declare class Chunkstore {
+    location: string;
+    name: string;
+    path: string;
+    chunk_size: number;
+    chunk_overlap: number;
+    separators: string[];
+    document: DocumentStore;
+    constructor({ location, name, chunk_size, chunk_overlap, separators, document, }: Props);
+    private openFile;
+    init(): Promise<void>;
+    private readFile;
+    private createFile;
+    add(data: ChunkTypeRequest): Promise<string[]>;
+    addMultiple(data: ChunkTypeRequestMultiple): Promise<string[]>;
+    get(data: string): Promise<ChunkType | undefined>;
+    list(): Promise<ChunkType[]>;
+    deleteItem(data: string): Promise<void>;
+    deleteMultipleItem(data: ChunkType[]): Promise<void>;
+    delete(): Promise<void>;
+}
+export default Chunkstore;
+//# sourceMappingURL=chunkStore.d.ts.map

package/dist/storage/chunkStore.d.ts.map

@@ -0,0 +1 @@
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package/dist/storage/chunkStore.js

@@ -0,0 +1,138 @@
+import fs from 'node:fs/promises';
+import { extractErrorMessage } from '../utils/extract_error_message.js';
+import crypto from 'node:crypto';
+import recursiveChunker from '../utils/chunker/recursive_chunker.js';
+class Chunkstore {
+    location;
+    name;
+    path;
+    chunk_size;
+    chunk_overlap;
+    separators;
+    document;
+    constructor({ location, name, chunk_size, chunk_overlap, separators, document, }) {
+        this.location = location;
+        this.name = name;
+        this.path = `${this.location}/chunks/${this.name}.json`;
+        this.chunk_size = chunk_size;
+        this.chunk_overlap = chunk_overlap;
+        this.separators = separators;
+        this.document = document;
+    }
+    async openFile() {
+        try {
+            await fs.access(this.path);
+            return true;
+        }
+        catch {
+            return false;
+        }
+    }
+    async init() {
+        const exists = await this.openFile();
+        if (exists) {
+            return;
+        }
+        if (this.location && this.name) {
+            await this.createFile(null);
+        }
+        else {
+            throw new Error('Data locations not available');
+        }
+    }
+    async readFile() {
+        try {
+            const contents = await fs.readFile(this.path, { encoding: 'utf8' });
+            return JSON.parse(contents);
+        }
+        catch (error) {
+            console.error(extractErrorMessage(error));
+            throw error;
+        }
+    }
+    async createFile(data) {
+        try {
+            await fs.mkdir(`${this.location}/chunks`, { recursive: true });
+            await fs.writeFile(this.path, JSON.stringify(data ?? []), {
+                flag: data ? 'w' : 'wx',
+            });
+        }
+        catch (error) {
+            console.error(extractErrorMessage(error));
+            throw error;
+        }
+    }
+    async add(data) {
+        try {
+            const contents = await this.readFile();
+            if (data.documentId) {
+                const doc = await this.document.get(data.documentId);
+                if (doc?.content) {
+                    const chunks = recursiveChunker(doc.content, this.chunk_size, this.chunk_overlap, this.separators);
+                    const chunkData = chunks.map((item, inx) => {
+                        const id = crypto.randomUUID();
+                        return {
+                            id,
+                            content: item,
+                            documentId: data.documentId,
+                            index: inx,
+                        };
+                    });
+                    await this.createFile([...contents, ...chunkData]);
+                    return chunkData.map((c) => c.id);
+                }
+            }
+            return [];
+        }
+        catch (err) {
+            console.error(err);
+            throw err;
+        }
+    }
+    async addMultiple(data) {
+        try {
+            const allIds = [];
+            for (const docId of data.documentId) {
+                const ids = await this.add({ documentId: docId });
+                allIds.push(...ids);
+            }
+            return allIds;
+        }
+        catch (error) {
+            console.error(error);
+            throw error;
+        }
+    }
+    async get(data) {
+        const contents = await this.readFile();
+        const req = contents.find((item) => item.id === data);
+        return req;
+    }
+    async list() {
+        const contents = await this.readFile();
+        return contents;
+    }
+    async deleteItem(data) {
+        const contents = await this.readFile();
+        const req = contents.filter((item) => item.id !== data);
+        await this.createFile(req);
+    }
+    async deleteMultipleItem(data) {
+        const contents = await this.readFile();
+        const ids = new Set(data.map((d) => d.id));
+        const req = contents.filter((item) => !ids.has(item.id));
+        await this.createFile(req);
+    }
+    async delete() {
+        try {
+            await fs.unlink(this.path);
+            console.log(`Chunk deleted: ${this.name}`);
+        }
+        catch (err) {
+            console.error(err);
+            throw err;
+        }
+    }
+}
+export default Chunkstore;
+//# sourceMappingURL=chunkStore.js.map

package/dist/storage/chunkStore.js.map

@@ -0,0 +1 @@
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package/dist/storage/documentStore.d.ts

@@ -0,0 +1,33 @@
+type Props = {
+    location: string;
+    name: string;
+};
+export type DocumentType = {
+    id: string;
+    content: string;
+    metadata: Record<string, string>;
+};
+type DocumentTypeRequest = {
+    content: string;
+    metadata: Record<string, string>;
+};
+declare class DocumentStore {
+    location: string;
+    name: string;
+    path: string;
+    constructor({ location, name }: Props);
+    private openFile;
+    init(): Promise<void>;
+    private readFile;
+    private createFile;
+    add(data: DocumentTypeRequest): Promise<void>;
+    get(data: string): Promise<DocumentType | undefined>;
+    list(): Promise<DocumentType[]>;
+    deleteItem(data: string): Promise<void>;
+    delete(): Promise<void>;
+    csvInjector(source: string): Promise<string[]>;
+    textInjector(source: string): Promise<string | null>;
+    pdfInjector(source: string): Promise<string | null>;
+}
+export default DocumentStore;
+//# sourceMappingURL=documentStore.d.ts.map

package/dist/storage/documentStore.d.ts.map

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