mcp-cognition-engine 1.0.0-alpha.1

package/LICENSE

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package/README.md

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+# MCP Rule Engine — Cognition Engine & Trust Governance Layer
+
+![build](https://img.shields.io/badge/build-passing-brightgreen)
+![coverage](https://img.shields.io/badge/coverage-95%25-brightgreen)
+![MCP](https://img.shields.io/badge/MCP_v1.29.0-compliant-blue)
+[![License](https://img.shields.io/badge/license-Apache_2.0-blue)](LICENSE)
+[![Trademark Policy](https://img.shields.io/badge/trademark-policy-orange)](TRADEMARK.md)
+
+> A production-grade MCP server that combines a cognition graph engine with a trusted governance layer. Provides intelligent code pattern matching, AST-level constraint validation, and auditable injection approval for AI agents.
+
+<!-- TEMP_BANNER_REMOVE_AFTER_2W -->
+> **📢 Protocol Update:** We have adopted Apache 2.0 licensing with a formal trademark policy. [Read the announcement →](DISCUSSION_ANNOUNCEMENT.md)
+<!-- /TEMP_BANNER -->
+
+---
+
+
+
+## The Problem It Solves
+
+AI Agents are powerful but chaotic. They generate code confidently, yet they lack a persistent *cognition layer* to remember project-specific patterns across sessions, and they lack a *governance layer* to enforce security boundaries on their own output. Without these, every agent session starts from zero — repeating the same mistakes, ignoring your team's conventions, and producing code that looks plausible but violates project invariants.
+
+This engine fixes that. It gives agents a **long-term graph memory** of project patterns (what works, what's forbidden, what's idiomatic in *this* codebase) and a **trusted approval workflow** so every injection is reviewed, audited, and accountable.
+
+---
+
+## Core Features
+
+- **Cognition Graph Engine** — Intent recognition, weighted graph traversal, and AST constraint solving for intelligent code analysis
+- **Trust Governance** — Three-tier knowledge base with injection approval workflow, TTL-based proposals, and audit logging
+- **Universal Connectivity** — Stdio (local) and Streamable HTTP (remote) transports with full MCP lifecycle support
+- **Agent Hard Constraints** — Output schema enforcement with \`validationRequired\` auto-validation; non-compliant agent responses intercepted
+- **Hot Config Updates** — Dynamic threshold tuning with expert mode authorization and version chain tracking
+
+---
+
+## Architecture
+
+\`\`\`mermaid
+flowchart LR
+    Agent["AI Agent (Cursor / Claude / Cline)"]
+    MCP["MCP Server (stdio / HTTP)"]
+    CV["Constraint Validator"]
+    GT["Graph Traverser"]
+    IA["Injection Approval"]
+    FL["Feedback Loop"]
+    DB[("SQLite / Prisma")]
+
+    Agent -->|tools/list → tools/call| MCP
+    MCP -->|cognition_validate| CV
+    MCP -->|cognition_query| GT
+    MCP -->|cognition_approve_injection| IA
+    MCP -->|cognition_feedback| FL
+    CV -->|parse + validate| GT
+    GT -->|weighted BFS| DB
+    IA -->|TTL proposal| DB
+    FL -->|update weights| DB
+    DB -->|graph data| GT
+\`\`\`
+
+---
+
+## Quick Start
+
+### Prerequisites
+
+- Node.js >= 18
+- npm >= 9
+
+### Setup
+
+\`\`\`bash
+git clone <repo-url> && cd mcp-rule-engine
+npm install
+npx prisma db push
+npm run build
+\`\`\`
+
+### Start Server
+
+\`\`\`bash
+# Stdio mode (default)
+node dist/index.js
+
+# HTTP mode
+TRANSPORT=http PORT=3000 node dist/index.js
+\`\`\`
+
+---
+
+## MCP Integration
+
+### Cursor
+
+Add to \`.cursor/mcp.json\`:
+
+\`\`\`json
+{
+  "mcpServers": {
+    "cognition-engine": {
+      "command": "node",
+      "args": ["dist/index.js"],
+      "env": { "DATABASE_URL": "file:./dev.db" }
+    }
+  }
+}
+\`\`\`
+
+### Claude Desktop
+
+Add to \`claude_desktop_config.json\`:
+
+\`\`\`json
+{
+  "mcpServers": {
+    "cognition-engine": {
+      "command": "node",
+      "args": ["path/to/mcp-rule-engine/dist/index.js"],
+      "env": { "DATABASE_URL": "file:./dev.db" }
+    }
+  }
+}
+\`\`\`
+
+### VS Code (GitHub Copilot Chat / VS Code MCP Extension)
+
+Add to your VS Code settings (User \`settings.json\` or workspace \`.vscode/mcp.json\`):
+
+\`\`\`json
+{
+  "mcp": {
+    "servers": {
+      "cognition-engine": {
+        "type": "stdio",
+        "command": "node",
+        "args": ["dist/index.js"],
+        "env": { "DATABASE_URL": "file:./dev.db" }
+      }
+    }
+  }
+}
+\`\`\`
+
+### Cline / Roo Code (HTTP)
+
+\`\`\`json
+{
+  "mcpServers": {
+    "cognition-engine": {
+      "url": "http://localhost:3000",
+      "transport": "streamable-http"
+    }
+  }
+}
+\`\`\`
+
+---
+
+## Trust Governance Protocol
+
+### Three-Tier Knowledge
+
+| Tier | Scope | Node Type | Validation |
+|------|-------|-----------|------------|
+| Global | Universal patterns | NegativeConstraint = REJECT | Hard block |
+| Project | Project conventions | PositiveConstraint = WARN | Soft warning |
+| Reuse | Cross-project patterns | Intent + Heuristic | Weight-based |
+
+### Injection Proposal State Machine
+
+\`\`\`mermaid
+stateDiagram-v2
+    [*] --> PENDING: cognition_query triggers implicit proposal
+    PENDING --> APPROVED: cognition_approve_injection(proposalId, APPROVE)
+    PENDING --> REJECTED: cognition_approve_injection(proposalId, REJECT)
+    PENDING --> OVERRIDDEN: cognition_approve_injection(proposalId, OVERRIDE)
+    PENDING --> EXPIRED: TTL = 5 min elapsed
+    APPROVED --> [*]: Rules injected into graph
+    REJECTED --> [*]: Proposal discarded
+    OVERRIDDEN --> [*]: Force-injected (audit logged)
+    EXPIRED --> [*]: -32602 Proposal Expired + retryable:true
+\`\`\`
+
+Proposals are in-memory with a 5-minute TTL. Concurrent proposals for the same context hash return the existing proposal to prevent conflicts. Expired proposals return \`-32602 Proposal Expired\` with \`retryable: true\`.
+
+### Constraint Validation Dual-Mode
+
+- **REJECT (Hard Block)** — Returned as \`-32602\` + \`ruleId\`. Agent must stop.
+- **WARN (Soft Warning)** — Returned as violation. Agent may continue with user confirmation.
+
+### Config Hot Update
+
+Dynamic thresholds (similarity 0.7 / 0.9) are stored as \`CognitionNode(type=HEURISTIC)\`. Each update creates a new version node with the old node marked \`supersededBy\`. Requires \`expertMode: true\`.
+
+### Audit & Compliance
+
+All injection decisions, config changes, and validation events are recorded via \`MetricEvent\` with async non-blocking writes. On database write failure, events fall back to \`logs/fallback.log\`.
+
+---
+
+## MCP Resources
+
+| URI | Type | Content |
+|-----|------|---------|
+| \`cognition://schema\` | application/json | Cognition graph data model |
+| \`cognition://stats\` | application/json | Node/edge counts + approvalRate7d |
+| \`cognition://docs\` | text/markdown | Full tool documentation |
+| \`cognition://rules-changelog\` | application/json | Versioned rule change log |
+
+---
+
+## MCP Tools
+
+| Tool | Description | readOnlyHint |
+|------|-------------|:---:|
+| \`cognition_query\` | Query graph by context hash | ✅ |
+| \`cognition_validate\` | Validate code against AST templates | ✅ |
+| \`cognition_feedback\` | Provide feedback to refine traversal | ❌ |
+| \`cognition_approve_injection\` | Approve/reject proposals with TTL | ❌ |
+| \`cognition_update_config\` | Hot-update thresholds (expert mode) | ❌ |
+
+---
+
+## Testing
+
+\`\`\`bash
+# Run all tests (118/118 passing)
+npm test
+
+# Run specific suite
+npx vitest run tests/protocol/
+\`\`\`
+
+---
+
+## Protocol Compliance
+
+This server conforms to **MCP Specification v1.29.0** and supports:
+
+- [x] initialize / initialized / ping / shutdown lifecycle
+- [x] tools/list + tools/call with JSON Schema input/output
+- [x] resources/list + resources/read with \`cognition://\` URI scheme
+- [x] StdioServerTransport and StreamableHTTPServerTransport
+- [x] Error codes: -32602 (invalid params), -32603 (internal), -32001 (timeout)
+- [x] Annotations: readOnlyHint, destructiveHint, openWorldHint
+
+---
+
+## Contributing
+
+We welcome contributions from the community! Here's how you can get involved:
+
+- **Report a bug**: Open an [issue](../../issues/new?labels=bug) with reproduction steps.
+- **Suggest a feature**: Start a [discussion](../../discussions) to gather feedback before implementation.
+- **Submit a PR**: Follow the guidelines in [CONTRIBUTING.md](CONTRIBUTING.md).
+
+For major changes, please open an issue first to discuss what you would like to change.
+
+### 🟢 New to the project?
+
+Looking for a place to start? Check out our [Good First Issues](../../issues?q=is%3Aissue+is%3Aopen+label%3A%22good+first+issue%22) — they're specifically scoped for first-time contributors and include detailed context, acceptance criteria, and file references.
+
+---
+
+## License
+
+Copyright (c) 2026 熊高锐
+
+Licensed under the Apache License, Version 2.0 (the "License");
+you may not use this file except in compliance with the License.
+You may obtain a copy of the License at
+
+    http://www.apache.org/licenses/LICENSE-2.0
+
+Unless required by applicable law or agreed to in writing, software
+distributed under the License is distributed on an "AS IS" BASIS,
+WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+See the License for the specific language governing permissions and
+limitations under the License.
+
+Full license text: [LICENSE](LICENSE).

package/dist/cli.d.ts

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+#!/usr/bin/env node
+/**
+ * Copyright 2026 熊高锐
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+export {};
+//# sourceMappingURL=cli.d.ts.map

package/dist/cli.d.ts.map

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+{"version":3,"file":"cli.d.ts","sourceRoot":"","sources":["../src/cli.ts"],"names":[],"mappings":";AACA;;;;;;;;;;;;;;GAcG"}

package/dist/cli.js

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+#!/usr/bin/env node
+/**
+ * Copyright 2026 熊高锐
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+import { execSync } from "child_process";
+import { existsSync, mkdirSync } from "fs";
+import { homedir } from "os";
+import { join } from "path";
+// ── Resolve database path ────────────────────────────────
+const DB_PATH = process.env.COGNITION_DB_PATH ?? join(homedir(), ".cognition", "dev.db");
+function resolveDbPath() {
+    const dir = DB_PATH.replace(/[/\\][^/\\]+$/, "");
+    if (!existsSync(dir)) {
+        try {
+            mkdirSync(dir, { recursive: true });
+        }
+        catch { /* ok */ }
+    }
+    return DB_PATH;
+}
+function ensureDatabase() {
+    const dbFile = resolveDbPath();
+    if (existsSync(dbFile))
+        return;
+    console.error("\ud83d\udd27 Initializing cognition database...");
+    const prismaSchema = join(import.meta.dirname, "..", "prisma", "schema.prisma");
+    if (!existsSync(prismaSchema)) {
+        console.error("Warning: prisma/schema.prisma not found — skipping auto-init");
+        return;
+    }
+    process.env.DATABASE_URL = `file:${dbFile}`;
+    try {
+        execSync("npx prisma db push --skip-generate", {
+            env: { ...process.env, DATABASE_URL: process.env.DATABASE_URL },
+            stdio: "inherit",
+        });
+        console.error("\u2705 Database initialized at", dbFile);
+    }
+    catch (err) {
+        console.error("\u2757 Database auto-init failed:", String(err));
+        console.error("You can run manually: npx prisma db push --skip-generate");
+    }
+}
+// ── Run server ────────────────────────────────────────────
+ensureDatabase();
+// Set env for the Prisma client used by the server
+process.env.DATABASE_URL = `file:${resolveDbPath()}`;
+// Now import and run the full server (same as src/index.ts but with
+// DATABASE_URL already set)
+import("./index.js").catch((err) => {
+    console.error("Fatal error:", err);
+    process.exit(1);
+});
+//# sourceMappingURL=cli.js.map

package/dist/cli.js.map

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package/dist/cognition-engine/ast-constraint-solver.d.ts

@@ -0,0 +1,67 @@
+/**
+ * Copyright 2026 熊高锐
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+import type { ASTNode } from "../types.js";
+import type { CognitionNodeData } from "../storage/cognition-types.js";
+import type { AstConstraint, ValidationResult, ValidationFailure, TransformPatch } from "./types.js";
+/**
+ * Parse templateDsl JSON string into AstConstraint array.
+ */
+export declare function parseConstraintDsl(dsl: string): AstConstraint[];
+export interface BindingResult {
+    bound: AstConstraint[];
+    /** Map of placeholder → bound value */
+    bindings: Record<string, string>;
+}
+/**
+ * Bind {{placeholder}} values in a constraint to actual AST node text.
+ * Walks the AST to find nodes matching each constraint's nodeType,
+ * then extracts text values for placeholders.
+ */
+export declare function bindConstraints(constraints: AstConstraint[], ast: ASTNode): BindingResult;
+/**
+ * Validate an AST against a set of bound constraints.
+ *
+ * @param constraints  Parsed + bound AstConstraint array
+ * @param nodeId       Source cognition node ID (for traceability)
+ * @param templateDsl  Original template DSL string
+ * @param ast          Target AST to validate
+ * @returns Structured validation result
+ */
+export declare function validateConstraints(constraints: AstConstraint[], nodeId: string, templateDsl: string, ast: ASTNode): ValidationResult;
+/**
+ * Generate a transform patch from validation failures.
+ * Creates operations that would fix the validation failures.
+ */
+export declare function generatePatchFromFailures(failures: ValidationFailure[], ast: ASTNode): TransformPatch[];
+/**
+ * Run the full constraint-solving pipeline:
+ *   1. Parse templateDSL from cognition nodes
+ *   2. Parse file content to AST
+ *   3. Bind {{placeholder}} values
+ *   4. Validate constraints
+ *   5. Generate transform patches
+ *
+ * @param cognitionNodes  Nodes with astTemplate to check
+ * @param fileContent     Source code to validate against
+ * @param language        Language for AST parsing
+ * @returns Validation + patch results
+ */
+export declare function solveConstraints(cognitionNodes: CognitionNodeData[], fileContent: string, language: string): Promise<{
+    validations: ValidationResult[];
+    patches: TransformPatch[];
+    boundValues: Record<string, string>;
+}>;
+//# sourceMappingURL=ast-constraint-solver.d.ts.map

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