mcp-code-context 3.6.3 → 3.7.1

package/dist/src/operations/confirmationStore.js

@@ -1,17 +1,33 @@
 /**
- * Confirmation Store - v3.6.3
+ * Confirmation Store - v3.7.1
  * Two-phase write: dry-run preview → confirm with token
  * Stores pending write operations with auto-expiry
+ * NOW with SQLite persistence for crash recovery
  */
 import * as crypto from "node:crypto";
+import { PendingOperationStore } from "./pendingStore.js";
 const EXPIRY_MS = 5 * 60 * 1000; // 5 minutes
 const MAX_PENDING = 50;
-class ConfirmationStore {
+export class ConfirmationStore {
     pending = new Map();
+    persistentStore = null;
+    sessionId;
+    cleanupInterval = null;
+    constructor(sessionId = "default", projectRoot) {
+        this.sessionId = sessionId;
+        if (projectRoot) {
+            this.persistentStore = new PendingOperationStore(projectRoot);
+        }
+        this.cleanupInterval = setInterval(() => this.cleanup(), 60_000);
+        if (this.cleanupInterval.unref) {
+            this.cleanupInterval.unref();
+        }
+    }
     /**
      * Store a pending write operation and return a confirmation token.
      * Invalidates any existing pending token for the same file(s) —
      * prevents stale tokens from overwriting newer changes.
+     * NOW persists to SQLite for crash recovery.
      */
     storePending(params) {
         this.cleanup();
@@ -35,7 +51,7 @@ class ConfirmationStore {
         }
         const token = crypto.randomBytes(16).toString("hex");
         const now = Date.now();
-        this.pending.set(token, {
+        const pendingOp = {
             token,
             filePath: params.filePath,
             operation: params.operation,
@@ -46,6 +62,11 @@ class ConfirmationStore {
             expiresAt: now + EXPIRY_MS,
             originalHash: params.originalHash,
             pendingWrites: params.pendingWrites,
+        };
+        this.pending.set(token, pendingOp);
+        // Persist to SQLite if available (fire-and-forget for crash recovery)
+        this.persistentStore?.storePending(this.sessionId, token, params).catch(() => {
+            // Persistence failure is non-blocking — token still valid in memory
         });
         // Enforce max pending limit
         if (this.pending.size > MAX_PENDING) {
@@ -60,18 +81,58 @@ class ConfirmationStore {
     }
     /**
      * Retrieve and consume a pending operation by token
+     * Tries in-memory first, then falls back to SQLite for crash recovery
      */
-    consumePending(token) {
+    async consumePending(token) {
         this.cleanup();
+        // Check in-memory (primary path)
         const op = this.pending.get(token);
-        if (!op)
-            return null;
-        if (Date.now() > op.expiresAt) {
+        if (op) {
+            if (Date.now() > op.expiresAt) {
+                this.pending.delete(token);
+                return null;
+            }
             this.pending.delete(token);
-            return null;
+            // Fire-and-forget: remove from persistent store too
+            this.persistentStore?.consumePending(token).catch(() => {
+                // Best-effort cleanup of consumed token from SQLite
+            });
+            return op;
+        }
+        // SQLite fallback for crash recovery
+        if (this.persistentStore) {
+            try {
+                const dbOp = await this.persistentStore.consumePending(token);
+                if (dbOp) {
+                    let parsedPendingWrites;
+                    if (dbOp.pendingWrites) {
+                        try {
+                            parsedPendingWrites = JSON.parse(dbOp.pendingWrites);
+                        }
+                        catch {
+                            // Malformed pendingWrites JSON in SQLite — proceed without multi-file writes
+                        }
+                    }
+                    return {
+                        token: dbOp.token,
+                        filePath: dbOp.filePath,
+                        operation: dbOp.operation,
+                        symbolName: dbOp.symbolName,
+                        newContent: dbOp.newContent,
+                        diff: dbOp.diff,
+                        createdAt: dbOp.createdAt,
+                        expiresAt: dbOp.expiresAt,
+                        originalHash: dbOp.originalHash,
+                        pendingWrites: parsedPendingWrites,
+                    };
+                }
+            }
+            catch (err) {
+                // SQLite crash-recovery path failed — non-blocking, but worth observing
+                console.error('[ConfirmationStore] SQLite fallback failed:', err);
+            }
         }
-        this.pending.delete(token);
-        return op;
+        return null;
     }
     /**
      * Check if any pending token exists for the given file path (without consuming).
@@ -123,9 +184,46 @@ class ConfirmationStore {
     clearAll() {
         this.pending.clear();
     }
+    /**
+     * List all pending operations (for recovery/debugging)
+     */
+    listAll() {
+        this.cleanup();
+        return Array.from(this.pending.values()).map(op => ({
+            token: op.token,
+            filePath: op.filePath,
+            operation: op.operation,
+            createdAt: op.createdAt,
+            expiresAt: op.expiresAt,
+        }));
+    }
+    /**
+     * Returns true if SQLite persistence is active for this store
+     */
+    hasPersistentStore() {
+        return this.persistentStore !== null;
+    }
+    /**
+     * Activate SQLite persistence after construction.
+     * Called when projectRoot becomes known (first real tool call).
+     */
+    activatePersistence(sessionId, projectRoot) {
+        if (this.persistentStore)
+            return; // already active
+        this.sessionId = sessionId;
+        this.persistentStore = new PendingOperationStore(projectRoot);
+    }
+    /**
+     * Close the persistent store
+     */
+    close() {
+        if (this.cleanupInterval) {
+            clearInterval(this.cleanupInterval);
+            this.cleanupInterval = null;
+        }
+        this.persistentStore?.close().catch(() => {
+            // Teardown cleanup — cannot recover
+        });
+    }
 }
-/**
- * Global confirmation store instance
- */
-export const globalConfirmationStore = new ConfirmationStore();
 //# sourceMappingURL=confirmationStore.js.map

package/dist/src/operations/confirmationStore.js.map

@@ -1 +1 @@
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package/dist/src/operations/impactAnalysis.d.ts

@@ -0,0 +1,9 @@
+/**
+ * Impact analysis operation
+ */
+import type { ReadResult } from "./readCore.js";
+export declare function analyzeImpact(params: {
+    filePath: string;
+    rootDir: string;
+    projectRoot: string;
+}): Promise<ReadResult>;

package/dist/src/operations/impactAnalysis.js

@@ -0,0 +1,61 @@
+/**
+ * Impact analysis operation
+ */
+import * as fs from "node:fs/promises";
+import * as path from "node:path";
+import { EXCLUDE_DIRS, SUPPORTED_EXTENSIONS } from "../utils/constants.js";
+import { walkDir } from "../utils/fileWalker.js";
+import { IndexManager } from "../core/indexManager.js";
+import { safeRegexAnyTest } from "../utils/safeRegex.js";
+import { sanitizeRegexPattern } from "../utils/regexValidator.js";
+export async function analyzeImpact(params) {
+    try {
+        // ── Fast path: use persistent index if available ──────────────────────
+        const indexManager = new IndexManager(params.projectRoot);
+        if (await indexManager.hasIndex()) {
+            const dependents = await indexManager.getDependents(params.filePath);
+            return {
+                success: true,
+                content: JSON.stringify({ file: params.filePath, dependents, source: "index" }, null, 2),
+            };
+        }
+        // ── Slow path: regex scan (no index yet) ─────────────────────────────
+        const dependents = [];
+        const fileName = path.basename(params.filePath);
+        const baseName = sanitizeRegexPattern(fileName.replace(/\.[^.]+$/, ""));
+        const fullName = sanitizeRegexPattern(fileName);
+        const importPatterns = [
+            `import.*from.*['"].*${baseName}`,
+            `require\\(['"].*${fullName}`,
+            `from.*${baseName}.*import`,
+        ];
+        await walkDir(params.rootDir, {
+            extensions: SUPPORTED_EXTENSIONS,
+            excludeDirs: EXCLUDE_DIRS,
+            onFile: async (fullPath) => {
+                const content = await fs.readFile(fullPath, "utf-8");
+                const matchResult = await safeRegexAnyTest(importPatterns, content);
+                if (matchResult.timedOut) {
+                    throw new Error(matchResult.error ?? "Regex timed out during impact scan (ReDoS prevented)");
+                }
+                if (!matchResult.success) {
+                    throw new Error(matchResult.error ?? "Impact scan regex failed");
+                }
+                if (matchResult.matched) {
+                    dependents.push(fullPath);
+                }
+            },
+        });
+        return {
+            success: true,
+            content: JSON.stringify({ file: params.filePath, dependents, source: "regex scan — run get_semantic_repo_map to build index" }, null, 2),
+        };
+    }
+    catch (error) {
+        return {
+            success: false,
+            error: error instanceof Error ? error.message : String(error),
+        };
+    }
+}
+//# sourceMappingURL=impactAnalysis.js.map

package/dist/src/operations/impactAnalysis.js.map

@@ -0,0 +1 @@
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package/dist/src/operations/pendingStore.d.ts

@@ -0,0 +1,51 @@
+/** Pending Operation Store - SQLite crash recovery */
+export interface PendingOperation {
+    token: string;
+    sessionId: string;
+    filePath: string;
+    operation: string;
+    symbolName?: string;
+    newContent: string;
+    diff: string;
+    createdAt: number;
+    expiresAt: number;
+    originalHash?: string;
+    pendingWrites?: string;
+}
+/** SQLite-backed pending operation store */
+export declare class PendingOperationStore {
+    private db;
+    private projectRoot;
+    private dbPath;
+    private initialized;
+    constructor(projectRoot: string);
+    private init;
+    private persist;
+    storePending(sessionId: string, token: string, params: {
+        filePath: string;
+        operation: string;
+        symbolName?: string;
+        newContent: string;
+        diff: string;
+        originalHash?: string;
+        pendingWrites?: Array<{
+            filePath: string;
+            newContent: string;
+        }>;
+    }): Promise<void>;
+    consumePending(token: string): Promise<PendingOperation | null>;
+    listPendingForSession(sessionId: string): Promise<Array<{
+        token: string;
+        filePath: string;
+        operation: string;
+        createdAt: number;
+        expiresAt: number;
+    }>>;
+    hasConflictingPending(filePath: string): Promise<boolean>;
+    getPendingCount(sessionId: string): Promise<number>;
+    clearSession(sessionId: string): Promise<void>;
+    clearAll(): Promise<void>;
+    private cleanup;
+    private normalizePath;
+    close(): Promise<void>;
+}

package/dist/src/operations/pendingStore.js

@@ -0,0 +1,201 @@
+/** Pending Operation Store - SQLite crash recovery */
+import * as fs from "node:fs/promises";
+import * as path from "node:path";
+import * as crypto from "node:crypto";
+import { getAppDir } from "../utils/appDir.js";
+import { openPendingDatabase } from "./pendingStoreInit.js";
+const EXPIRY_MS = 5 * 60 * 1000;
+/** SQLite-backed pending operation store */
+export class PendingOperationStore {
+    db = null;
+    projectRoot;
+    dbPath;
+    initialized = false;
+    constructor(projectRoot) {
+        this.projectRoot = projectRoot;
+        const projectHash = crypto.createHash('sha256')
+            .update(projectRoot)
+            .digest('hex')
+            .substring(0, 8);
+        this.dbPath = path.join(getAppDir(`pending/${projectHash}`), 'pending.db');
+    }
+    async init() {
+        if (this.initialized)
+            return;
+        this.db = await openPendingDatabase(this.dbPath);
+        this.initialized = true;
+        this.cleanup();
+    }
+    async persist() {
+        if (!this.db)
+            return;
+        const data = this.db.export();
+        await fs.mkdir(path.dirname(this.dbPath), { recursive: true });
+        const tmpPath = `${this.dbPath}.tmp`;
+        await fs.writeFile(tmpPath, data);
+        await fs.rename(tmpPath, this.dbPath);
+    }
+    async storePending(sessionId, token, params) {
+        await this.init();
+        if (!this.db)
+            throw new Error("Database not initialized");
+        this.cleanup();
+        // Invalidate conflicting operations (same file)
+        const normalizedPath = this.normalizePath(params.filePath);
+        this.db.run(`
+      DELETE FROM pending_operations 
+      WHERE file_path = ? OR pending_writes LIKE ?
+    `, [normalizedPath, `%"${normalizedPath}"%`]);
+        const now = Date.now();
+        this.db.run(`
+      INSERT INTO pending_operations (
+        token, session_id, file_path, operation, symbol_name,
+        new_content, diff, created_at, expires_at, original_hash, pending_writes
+      ) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
+    `, [
+            token,
+            sessionId,
+            normalizedPath,
+            params.operation,
+            params.symbolName || null,
+            params.newContent,
+            params.diff,
+            now,
+            now + EXPIRY_MS,
+            params.originalHash || null,
+            params.pendingWrites ? JSON.stringify(params.pendingWrites) : null
+        ]);
+        await this.persist();
+    }
+    async consumePending(token) {
+        await this.init();
+        if (!this.db)
+            return null;
+        this.cleanup();
+        const stmt = this.db.prepare(`
+      SELECT * FROM pending_operations WHERE token = ?
+    `);
+        stmt.bind([token]);
+        let row = null;
+        if (stmt.step()) {
+            row = stmt.getAsObject();
+        }
+        stmt.free();
+        if (!row)
+            return null;
+        if (Date.now() > row.expires_at) {
+            this.db.run(`DELETE FROM pending_operations WHERE token = ?`, [token]);
+            await this.persist();
+            return null;
+        }
+        // Delete after retrieval (consume)
+        this.db.run(`DELETE FROM pending_operations WHERE token = ?`, [token]);
+        await this.persist();
+        return {
+            token: row.token,
+            sessionId: row.session_id,
+            filePath: row.file_path,
+            operation: row.operation,
+            symbolName: row.symbol_name || undefined,
+            newContent: row.new_content,
+            diff: row.diff,
+            createdAt: row.created_at,
+            expiresAt: row.expires_at,
+            originalHash: row.original_hash || undefined,
+            pendingWrites: row.pending_writes || undefined,
+        };
+    }
+    async listPendingForSession(sessionId) {
+        await this.init();
+        if (!this.db)
+            return [];
+        this.cleanup();
+        const stmt = this.db.prepare(`
+      SELECT token, file_path, operation, created_at, expires_at
+      FROM pending_operations
+      WHERE session_id = ? AND expires_at > ?
+      ORDER BY created_at DESC
+    `);
+        stmt.bind([sessionId, Date.now()]);
+        const results = [];
+        while (stmt.step()) {
+            results.push(stmt.getAsObject());
+        }
+        stmt.free();
+        return results.map((row) => ({
+            token: row.token,
+            filePath: row.file_path,
+            operation: row.operation,
+            createdAt: row.created_at,
+            expiresAt: row.expires_at,
+        }));
+    }
+    async hasConflictingPending(filePath) {
+        await this.init();
+        if (!this.db)
+            return false;
+        this.cleanup();
+        const normalizedPath = this.normalizePath(filePath);
+        const stmt = this.db.prepare(`
+      SELECT COUNT(*) as count FROM pending_operations
+      WHERE (file_path = ? OR pending_writes LIKE ?) AND expires_at > ?
+    `);
+        stmt.bind([normalizedPath, `%"${normalizedPath}"%`, Date.now()]);
+        let count = 0;
+        if (stmt.step()) {
+            const row = stmt.getAsObject();
+            count = row.count;
+        }
+        stmt.free();
+        return count > 0;
+    }
+    async getPendingCount(sessionId) {
+        await this.init();
+        if (!this.db)
+            return 0;
+        this.cleanup();
+        const stmt = this.db.prepare(`
+      SELECT COUNT(*) as count FROM pending_operations
+      WHERE session_id = ? AND expires_at > ?
+    `);
+        stmt.bind([sessionId, Date.now()]);
+        let count = 0;
+        if (stmt.step()) {
+            const row = stmt.getAsObject();
+            count = row.count;
+        }
+        stmt.free();
+        return count;
+    }
+    async clearSession(sessionId) {
+        await this.init();
+        if (!this.db)
+            return;
+        this.db.run(`DELETE FROM pending_operations WHERE session_id = ?`, [sessionId]);
+        await this.persist();
+    }
+    async clearAll() {
+        await this.init();
+        if (!this.db)
+            return;
+        this.db.run(`DELETE FROM pending_operations`);
+        await this.persist();
+    }
+    cleanup() {
+        if (!this.db)
+            return;
+        const now = Date.now();
+        this.db.run(`DELETE FROM pending_operations WHERE expires_at < ?`, [now]);
+    }
+    normalizePath(filePath) {
+        return filePath.replace(/\\/g, '/').toLowerCase();
+    }
+    async close() {
+        if (this.db) {
+            await this.persist();
+            this.db.close();
+            this.db = null;
+        }
+    }
+}
+//# sourceMappingURL=pendingStore.js.map

package/dist/src/operations/pendingStore.js.map

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package/dist/src/operations/pendingStoreInit.d.ts

@@ -0,0 +1,6 @@
+/**
+ * Pending store database initialization
+ */
+import { Database } from "sql.js";
+export declare function initPendingSchema(db: Database): void;
+export declare function openPendingDatabase(dbPath: string): Promise<Database>;

package/dist/src/operations/pendingStoreInit.js

@@ -0,0 +1,42 @@
+/**
+ * Pending store database initialization
+ */
+import initSqlJs from "sql.js";
+import * as fs from "node:fs/promises";
+import { existsSync } from "fs";
+import * as path from "node:path";
+export function initPendingSchema(db) {
+    db.run(`
+    CREATE TABLE IF NOT EXISTS pending_operations (
+      token TEXT PRIMARY KEY,
+      session_id TEXT NOT NULL,
+      file_path TEXT NOT NULL,
+      operation TEXT NOT NULL,
+      symbol_name TEXT,
+      new_content TEXT NOT NULL,
+      diff TEXT NOT NULL,
+      created_at INTEGER NOT NULL,
+      expires_at INTEGER NOT NULL,
+      original_hash TEXT,
+      pending_writes TEXT
+    )
+  `);
+    db.run(`CREATE INDEX IF NOT EXISTS idx_session_id ON pending_operations(session_id)`);
+    db.run(`CREATE INDEX IF NOT EXISTS idx_expires_at ON pending_operations(expires_at)`);
+    db.run(`CREATE INDEX IF NOT EXISTS idx_file_path ON pending_operations(file_path)`);
+}
+export async function openPendingDatabase(dbPath) {
+    const SQL = await initSqlJs();
+    let db;
+    if (existsSync(dbPath)) {
+        db = new SQL.Database(await fs.readFile(dbPath));
+    }
+    else {
+        db = new SQL.Database();
+    }
+    initPendingSchema(db);
+    await fs.mkdir(path.dirname(dbPath), { recursive: true });
+    await fs.writeFile(dbPath, db.export());
+    return db;
+}
+//# sourceMappingURL=pendingStoreInit.js.map

package/dist/src/operations/pendingStoreInit.js.map

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