mcp-ai-agent-guidelines 0.16.0 → 0.18.0

package/CHANGELOG.md

@@ -8,6 +8,27 @@ and [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
 ## [Unreleased]
 
+## [0.18.0] - 2026-06-16
+
+### Changed
+- remove toon (#1517)
+
+## [0.17.0] - 2026-05-05
+### Added
+- implement workspace root anchoring for state storage and enhance ToonMemoryInterface
+- **mcp**: implement startup onboarding memory handling and enhance tool result summarization
+- **mcp**: allow workspace writes when uninitialized
+
+### Documentation
+- **mcp**: document local write behavior for .mcp-ai-agent-guidelines
+
+### Fixed
+- **pr**: address PR #1467 review feedback
+- **mcp**: make all state artifact writes atomic
+- **mcp**: use atomic writes for memory artifacts and snapshots
+
+### Changed
+- **mcp**: improve workspace directory handling and cleanup in tests
 ## [0.16.0] - 2026-04-28
 ### Fixed
 - update tool references and enhance memory tool tests for better context handling

package/README.md

@@ -57,8 +57,8 @@ npm install -g mcp-ai-agent-guidelines
 # MCP stdio server entrypoint
 mcp-ai-agent-guidelines
 
-# Interactive CLI
-mcp-cli info
+# IDE hook + skill-file installer
+mcp-cli --help
 ```
 
 ### Local install (monorepo / project dependency)
@@ -116,12 +116,19 @@ Add the server to your MCP host config. The entry-point is `dist/index.js` and c
 
 ### Claude Desktop (`~/Library/Application Support/Claude/claude_desktop_config.json`)
 
+> [!IMPORTANT]
+> Claude Desktop spawns the server with a different working directory than your project.
+> Set `MCP_WORKSPACE_ROOT` to the absolute path of the project you want the server to write state into.
+
 ```json
 {
   "mcpServers": {
     "ai-agent-guidelines": {
       "command": "npx",
-      "args": ["mcp-ai-agent-guidelines"]
+      "args": ["-y", "mcp-ai-agent-guidelines@latest"],
+      "env": {
+        "MCP_WORKSPACE_ROOT": "/absolute/path/to/your/project"
+      }
     }
   }
 }
@@ -135,7 +142,10 @@ Add the server to your MCP host config. The entry-point is `dist/index.js` and c
     "ai-agent-guidelines": {
       "type": "stdio",
       "command": "npx",
-      "args": ["mcp-ai-agent-guidelines"]
+      "args": ["-y", "mcp-ai-agent-guidelines@latest"],
+      "env": {
+        "MCP_WORKSPACE_ROOT": "${workspaceFolder}"
+      }
     }
   }
 }
@@ -158,24 +168,19 @@ Add the server to your MCP host config. The entry-point is `dist/index.js` and c
 
 ## CLI Usage
 
-An interactive CLI wizard is included for standalone use outside an MCP host. The
-published package exposes two entrypoints:
+The published package exposes two entrypoints:
 
-- `mcp-ai-agent-guidelines` — MCP stdio server entrypoint for editors and MCP hosts
-- `mcp-cli` — interactive CLI for onboarding, orchestration, and diagnostics
+- `mcp-ai-agent-guidelines` — MCP stdio server entrypoint for editors and MCP hosts (the primary surface; an agent reaches all functionality through this)
+- `mcp-cli` — a thin IDE-integration installer. It does not duplicate MCP server functionality; its only purpose is to wire up the hook scripts and per-IDE `SKILL.md` files that an agent itself cannot install.
 
 ```bash
-# Project onboarding
-mcp-cli onboard init
-
-# Re-open the orchestration editor
-mcp-cli orchestration edit
-
-# Quick re-entry for environment + model fleet only
-mcp-cli orchestration edit --quick
+# Install SessionStart / PreToolUse hooks for an IDE
+mcp-cli hooks setup --client vscode        # or copilot-cli / claude-code
+mcp-cli hooks print --client claude-code   # preview without writing
 
-# Direct skill invocation
-mcp-cli --skill core-prompt-engineering --request "Write a system prompt for a coding assistant"
+# Emit per-IDE skill files for every public instruction
+mcp-cli onboard skills --target all        # copilot + claude + codex
+mcp-cli onboard skills --target claude --global   # user-home install
 ```
 
 Instruction-tool input schema — the public instruction workflows share this shape:
@@ -192,10 +197,8 @@ Instruction-tool input schema — the public instruction workflows share this sh
 
 ## Configuration Files
 
-- `.mcp-ai-agent-guidelines/config/orchestration.toml` — primary orchestration authority (local, not tracked in git)
-- `src/config/orchestration-defaults.ts` — builtin bootstrap defaults used to auto-create the workspace config in advisory mode when `orchestration.toml` is absent
-
-First-time runs auto-create `orchestration.toml` from builtin advisory defaults, including semantic role placeholders so routing can proceed before model discovery. Run `mcp-cli onboard init` to customize the setup or `mcp-cli orchestration edit` to reopen the interactive editor.
+- `.mcp-ai-agent-guidelines/config/orchestration.toml` — optional orchestration overrides. The MCP server **no longer auto-writes** this file; defaults come from `src/config/orchestration-defaults.ts` in memory. Write the file explicitly (via `mcp-cli` is no longer available — edit by hand, or persist via the `model-discover` MCP tool's save action) if you need to override the advisory defaults.
+- `src/config/orchestration-defaults.ts` — builtin defaults used in memory whenever a workspace config is absent.
 
 ---
 
@@ -359,7 +362,21 @@ Published package note: the npm package ships `dist/`, `README.md`, and `LICENSE
 | `DISABLE_ADAPTIVE_ROUTING` | unset / `"false"` | Set to `true` to hide `routing-adapt` and block `adapt-*` skills; enabled by default (opt-out model) |
 | `ALLOW_INTENSIVE_SKILLS` | unset / `"false"` | Must be `true` to allow resource-intensive skills such as `bench-eval-suite`, `eval-prompt-bench`, `qm-path-integral-historian`, and `gr-spacetime-debt-metric` |
 | `ENABLE_PHYSICS_SKILLS` | unset / `"false"` | Required by input validation when physics skills are not otherwise authorized; physics skills also require conventional-evidence schema validation |
+| `MCP_WORKSPACE_ROOT` | unset | Absolute path to the project directory the server should write state into (`.mcp-ai-agent-guidelines/`). Required when using `npx` via Claude Desktop, Cursor, or Windsurf — these clients do not preserve the terminal's working directory. VS Code supports `${workspaceFolder}`. |
 | `MCP_SLIM_MODE` | unset / `"false"` | Set to `true` to expose only the minimal surface: `task-bootstrap`, `meta-routing`, and `project-onboard` (useful for low-context agents) |
+| `MCP_SERENA_COMMAND` | unset | Opt-in. When set, the server spawns Serena as a child MCP server over stdio and resolves Serena queries directly. When unset (default), the server emits structured **advisories** that the host model executes via its own Serena connection — recommended when the host (e.g. Claude Code) already runs Serena. |
+| `MCP_SERENA_ARGS` | unset | Space-separated args passed to `MCP_SERENA_COMMAND`. Example: `--from git+https://github.com/oraios/serena serena-mcp-server`. |
+| `MCP_SERENA_CWD` | unset | Working directory for the spawned Serena child. Defaults to the parent process cwd. |
+| `MCP_LOCAL_MEMORY` | unset / `"false"` | Set to `true` to restore the legacy per-tool-call TOON memory artifact write+read flow (writes under `.mcp-ai-agent-guidelines/memory/`). Off by default — the Serena advisory footer is the recommended cross-session memory channel. |
+
+### Symbol & memory backend (Serena)
+
+Tool responses can be enriched with Serena's LSP-backed symbol surface and per-project memories. Two modes:
+
+- **Advisory mode (default)** — no setup. Tool responses append a `🧭 Serena enrichment available` footer that names the exact Serena tool (`mcp__serena__find_symbol`, `mcp__serena__list_memories`, etc.) and arguments the host model should call. Use this when your MCP host already loads Serena as a sibling server (e.g. Claude Code with Serena configured).
+- **Child-spawn mode (opt-in)** — set `MCP_SERENA_COMMAND=uvx` and `MCP_SERENA_ARGS="--from git+https://github.com/oraios/serena serena start-mcp-server --project <your-project-path>"`. The server spawns Serena once on startup and resolves queries directly, embedding the data in the response footer. Pin `--project` explicitly because Serena's global registry won't auto-activate a fresh `cwd`. Use this mode when no host-level Serena is available. Verify the wiring with `npm run test:mcp:serena` (requires `MCP_SERENA_E2E=1` and `uvx` installed).
+
+Both modes go through the same internal seam (`src/serena/client.ts`), so tool code paths are identical regardless of mode.
 
 ### Skill gates
 
@@ -416,15 +433,15 @@ Copy the following JSON to `~/.copilot/hooks/mcp-ai-agent-guidelines-hooks.json`
 
 ### Routing guidance
 
-The `.agent/rules/` directory contains IDE-readable routing tables:
+The `.claude/rules/` directory contains IDE-readable routing tables:
 
-- `.agent/rules/default.md` — universal symptom → tool pipeline table and anti-patterns
-- `.agent/rules/copilot.md` — VS Code Copilot-specific quick reference and session-start checklist
+- `.claude/rules/default.md` — universal symptom → tool pipeline table and anti-patterns
+- `.claude/rules/copilot.md` — VS Code Copilot-specific quick reference and session-start checklist
 
-These files are automatically picked up by Copilot's custom instructions system and by Serena's hook integration layer.
+These files are automatically picked up by Claude Code, Copilot's custom instructions system, and Serena's hook integration layer.
 
 > [!NOTE]
-> The published npm package does **not** include `.agent/rules/`. If you install from npm and want these routing rules, copy them from the GitHub repository into your workspace.
+> The published npm package does **not** include `.claude/rules/`. If you install from npm and want these routing rules, copy them from the GitHub repository into your workspace.
 
 ---
 

package/dist/cli/skill-hook-emitter.d.ts

@@ -0,0 +1,39 @@
+/**
+ * Per-IDE skill-hook emitter.
+ *
+ * Writes one `SKILL.md` file per public instruction into a client-specific
+ * directory so target IDEs (Copilot, Claude Code, Codex) can auto-load them
+ * as skills.  Extracted from the old `OnboardingWizard.emitSkillHooks` so the
+ * wizard (and the rest of the TOON-based onboarding stack) can be deleted
+ * without losing this IDE-integration surface.
+ *
+ * Layout:
+ *
+ *   | Client   | Local                | Global                       |
+ *   |----------|----------------------|------------------------------|
+ *   | copilot  | .github/skills/      | ~/.copilot/skills/           |
+ *   | claude   | .claude/skills/      | ~/.claude/skills/            |
+ *   | codex    | .agents/skills/      | ~/.agents/skills/            |
+ *
+ * "Local" = workspace-relative; "global" = under the user's home directory.
+ */
+export type SkillHookClient = "copilot" | "claude" | "codex";
+export declare const SKILL_HOOK_CLIENTS: readonly SkillHookClient[];
+export interface EmitSkillHooksOptions {
+    /** When true, write to user-home paths instead of workspace-relative ones. */
+    global?: boolean;
+    /** Subset of clients to target.  Defaults to all three. */
+    clients?: readonly SkillHookClient[];
+    /** Override the workspace root used for "local" writes (defaults to cwd). */
+    cwd?: string;
+    /** Override `homedir()` (test seam). */
+    home?: string;
+    /** Disable the per-client console summary (test seam). */
+    quiet?: boolean;
+}
+/**
+ * Emit one SKILL.md per public instruction into the requested clients'
+ * skill-hook directories.  Returns the total file count.
+ */
+export declare function emitSkillHooks(options?: EmitSkillHooksOptions): Promise<number>;
+//# sourceMappingURL=skill-hook-emitter.d.ts.map

package/dist/cli/skill-hook-emitter.d.ts.map

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package/dist/cli/skill-hook-emitter.js

@@ -0,0 +1,83 @@
+/**
+ * Per-IDE skill-hook emitter.
+ *
+ * Writes one `SKILL.md` file per public instruction into a client-specific
+ * directory so target IDEs (Copilot, Claude Code, Codex) can auto-load them
+ * as skills.  Extracted from the old `OnboardingWizard.emitSkillHooks` so the
+ * wizard (and the rest of the TOON-based onboarding stack) can be deleted
+ * without losing this IDE-integration surface.
+ *
+ * Layout:
+ *
+ *   | Client   | Local                | Global                       |
+ *   |----------|----------------------|------------------------------|
+ *   | copilot  | .github/skills/      | ~/.copilot/skills/           |
+ *   | claude   | .claude/skills/      | ~/.claude/skills/            |
+ *   | codex    | .agents/skills/      | ~/.agents/skills/            |
+ *
+ * "Local" = workspace-relative; "global" = under the user's home directory.
+ */
+import { mkdir, writeFile } from "node:fs/promises";
+import { homedir } from "node:os";
+import { join } from "node:path";
+import chalk from "chalk";
+import { INSTRUCTION_SPECS } from "../instructions/instruction-specs.js";
+export const SKILL_HOOK_CLIENTS = [
+    "copilot",
+    "claude",
+    "codex",
+];
+const SKILL_HOOK_DIRS = {
+    copilot: {
+        local: [".github", "skills"],
+        global: [".copilot", "skills"],
+    },
+    claude: {
+        local: [".claude", "skills"],
+        global: [".claude", "skills"],
+    },
+    codex: {
+        local: [".agents", "skills"],
+        global: [".agents", "skills"],
+    },
+};
+/**
+ * Emit one SKILL.md per public instruction into the requested clients'
+ * skill-hook directories.  Returns the total file count.
+ */
+export async function emitSkillHooks(options = {}) {
+    const { global = false, clients = SKILL_HOOK_CLIENTS, cwd = process.cwd(), home = homedir(), quiet = false, } = options;
+    const publicSpecs = INSTRUCTION_SPECS.filter((spec) => spec.public);
+    let written = 0;
+    for (const client of clients) {
+        const segments = global
+            ? SKILL_HOOK_DIRS[client].global
+            : SKILL_HOOK_DIRS[client].local;
+        const rootDir = join(global ? home : cwd, ...segments);
+        for (const spec of publicSpecs) {
+            const skillDir = join(rootDir, spec.toolName);
+            await mkdir(skillDir, { recursive: true });
+            const content = [
+                "---",
+                `name: "${spec.toolName}"`,
+                "description: |",
+                ...spec.description.split("\n").map((line) => `  ${line}`),
+                "---",
+                "",
+                `<!-- Generated by mcp-cli onboard skills${global ? " --global" : ""} --client ${client} -->`,
+                `<!-- Source: ${spec.sourcePath} -->`,
+                "",
+            ].join("\n");
+            await writeFile(join(skillDir, "SKILL.md"), content, "utf8");
+            written++;
+        }
+        if (!quiet) {
+            const destLabel = global
+                ? `~/${segments.join("/")}/ `
+                : `${segments.join("/")}/ `;
+            console.log(chalk.cyan(`  📁 [${client}] Skill hooks → ${destLabel}(${publicSpecs.length} files)`));
+        }
+    }
+    return written;
+}
+//# sourceMappingURL=skill-hook-emitter.js.map

package/dist/cli/skill-hook-emitter.js.map

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package/dist/cli.d.ts

@@ -1,35 +1,26 @@
 /**
- * CLI foundation for MCP AI Agent Guidelines v2
- * Commander.js-based CLI tooling for configuration management and onboarding
- */
-import { ScriptRunner } from "./cli/script-runner.js";
-import { ToonMemoryInterface } from "./memory/toon-interface.js";
-import { ModelOrchestrationRunner } from "./models/model-orchestration-runner.js";
-import OnboardingWizard from "./onboarding/wizard.js";
-import { ReportingCliCommands } from "./presentation/cli-extensions.js";
-interface CliContext {
-    memoryInterface: ToonMemoryInterface;
-    onboardingWizard: OnboardingWizard;
-    orchestrationRunner: ModelOrchestrationRunner;
-    reportingCommands: ReportingCliCommands;
-    scriptRunner: ScriptRunner;
-    verbose: boolean;
-}
-/**
- * Main CLI application
+ * `mcp-cli` — slim companion CLI for the MCP server.
+ *
+ * Scope is intentionally tiny: the MCP server (and Serena, via the 🧭
+ * enrichment footer it emits) covers everything an agent needs at runtime.
+ * What an agent **cannot** do is wire up IDE-side hooks and per-IDE skill
+ * files — that's the only purpose this CLI still serves.
+ *
+ * Commands:
+ *   - `hooks setup --client <vscode|copilot-cli|claude-code>` — install
+ *     SessionStart / PreToolUse hook scripts so the IDE re-orients the
+ *     agent on session boundaries and drift.
+ *   - `hooks print --client <client>` — preview the hook JSON.
+ *   - `hooks remind-session` / `hooks remind-drift` — invoked **by** the
+ *     installed hook scripts at runtime; not user-facing.
+ *   - `onboard skills [--global] [--target copilot|claude|codex|all]` —
+ *     generate per-IDE `SKILL.md` hook files for every public instruction.
  */
 export declare class McpAgentCli {
     private program;
-    private context;
-    constructor(contextOverrides?: Partial<CliContext>);
-    private setupCommands;
-    private setupOnboardingCommands;
-    private setupOrchestrationCommands;
+    constructor();
+    private setupOnboardCommands;
     private setupHooksCommands;
-    private setupMemoryCommands;
-    private setupStatusCommands;
-    private setupReportingCommands;
-    private setupDevCommands;
     run(args?: string[]): Promise<void>;
 }
 export default McpAgentCli;

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