mcp-adr-analysis-server 2.7.39 → 2.7.40

package/dist/src/mcp-adr-analysis-server.js

@@ -0,0 +1,4700 @@
+/**
+ * MCP ADR Analysis Server
+ * Main entry point for the Model Context Protocol server
+ *
+ * This server provides Tools, Resources, and Prompts for analyzing
+ * Architectural Decision Records and project architecture.
+ */
+import { Server } from '@modelcontextprotocol/sdk/server/index.js';
+import { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js';
+import { CallToolRequestSchema, ListToolsRequestSchema, ListResourcesRequestSchema, ReadResourceRequestSchema, ListPromptsRequestSchema, GetPromptRequestSchema, } from '@modelcontextprotocol/sdk/types.js';
+import { readFileSync } from 'fs';
+import { join } from 'path';
+import { getCurrentDirCompat } from './utils/directory-compat.js';
+import { McpAdrError } from './types/index.js';
+import { maskMcpResponse, createMaskingConfig, } from './utils/output-masking.js';
+import { loadConfig, validateProjectPath, createLogger, printConfigSummary, } from './utils/config.js';
+import { KnowledgeGraphManager } from './utils/knowledge-graph-manager.js';
+import { getEnhancedModeDefault, getKnowledgeEnhancementDefault, } from './utils/test-aware-defaults.js';
+import { StateReinforcementManager } from './utils/state-reinforcement-manager.js';
+import { ConversationMemoryManager } from './utils/conversation-memory-manager.js';
+import { MemoryEntityManager } from './utils/memory-entity-manager.js';
+import { RootManager } from './utils/root-manager.js';
+import { ServerContextGenerator } from './utils/server-context-generator.js';
+import { createNoOpContext } from './types/tool-context.js';
+import { getToolListForMCP } from './tools/tool-dispatcher.js';
+import { dispatchTool } from './tools/tool-dispatch.js';
+import { shouldUseCEMCPDirective, getCEMCPDirective, formatDirectiveResponse, } from './tools/ce-mcp-tools.js';
+import { loadAIConfig, isCEMCPEnabled } from './config/ai-config.js';
+/**
+ * Get version from package.json
+ */
+export function getPackageVersion() {
+    try {
+        // Handle both Jest environment and normal execution
+        const currentDir = getCurrentDirCompat();
+        // Strategy 1: Try multiple possible locations for package.json
+        const possiblePaths = [
+            join(currentDir, 'package.json'),
+            join(currentDir, '..', 'package.json'),
+            join(currentDir, '..', '..', 'package.json'),
+            join(process.cwd(), 'package.json'),
+        ];
+        for (const packageJsonPath of possiblePaths) {
+            try {
+                const packageJson = JSON.parse(readFileSync(packageJsonPath, 'utf-8'));
+                if (packageJson.name === 'mcp-adr-analysis-server') {
+                    return packageJson.version;
+                }
+            }
+            catch {
+                // Try next path
+            }
+        }
+        // Strategy 2: Use process.env.npm_package_version if available (during npm scripts)
+        if (process.env['npm_package_version']) {
+            return process.env['npm_package_version'];
+        }
+        // Final fallback: Use generic version instead of hardcoded specific version
+        // This prevents the need to update this code when version changes
+        return 'unknown'; // Generic fallback - no longer tied to specific version
+    }
+    catch (error) {
+        console.error('Error reading package.json:', error);
+        return 'unknown'; // Generic fallback - no longer tied to specific version
+    }
+}
+/**
+ * Server configuration
+ */
+const SERVER_INFO = {
+    name: 'mcp-adr-analysis-server',
+    version: getPackageVersion(),
+    description: 'MCP server for analyzing Architectural Decision Records and project architecture',
+};
+/**
+ * Main server class
+ */
+export class McpAdrAnalysisServer {
+    server;
+    maskingConfig;
+    config;
+    logger;
+    kgManager;
+    stateReinforcementManager;
+    conversationMemoryManager;
+    memoryEntityManager;
+    rootManager;
+    contextGenerator;
+    constructor() {
+        // Load and validate configuration
+        this.config = loadConfig();
+        this.logger = createLogger(this.config);
+        this.kgManager = new KnowledgeGraphManager();
+        this.stateReinforcementManager = new StateReinforcementManager(this.kgManager);
+        this.conversationMemoryManager = new ConversationMemoryManager(this.kgManager);
+        this.memoryEntityManager = new MemoryEntityManager();
+        // Initialize root manager for file access control
+        this.rootManager = new RootManager(this.config.projectPath, this.config.adrDirectory);
+        // Initialize server context generator
+        this.contextGenerator = new ServerContextGenerator();
+        // Print configuration summary
+        printConfigSummary(this.config);
+        // Note: Validation will be done during startup
+        this.server = new Server(SERVER_INFO, {
+            capabilities: {
+                tools: {},
+                resources: {},
+                prompts: {},
+            },
+        });
+        this.maskingConfig = createMaskingConfig();
+        this.setupHandlers();
+    }
+    /**
+     * Validate configuration and project setup
+     */
+    async validateConfiguration() {
+        try {
+            await validateProjectPath(this.config.projectPath);
+            this.logger.info(`Project path validated: ${this.config.projectPath}`);
+        }
+        catch (error) {
+            const errorMessage = error instanceof Error ? error.message : String(error);
+            this.logger.error(`Configuration validation failed: ${errorMessage}`);
+            throw error;
+        }
+    }
+    /**
+     * Public health check method for testing
+     */
+    async healthCheck() {
+        await this.validateConfiguration();
+        this.logger.info('Health check completed successfully');
+    }
+    /**
+     * Setup MCP protocol handlers
+     *
+     * @description Configures all Model Context Protocol request handlers for the ADR Analysis Server.
+     * Implements the complete MCP specification including tools, resources, and prompts.
+     *
+     * @private
+     * @since 2.0.0
+     * @category MCP Protocol
+     */
+    setupHandlers() {
+        /**
+         * List Tools Handler - MCP Protocol Endpoint
+         *
+         * @description Returns the complete catalog of available tools for ADR analysis,
+         * research, validation, and deployment operations. Each tool includes comprehensive
+         * input schemas and descriptions for client integration.
+         *
+         * @returns {Promise<{tools: Array}>} Complete tool catalog with schemas
+         *
+         * @example
+         * ```typescript
+         * // MCP Client usage
+         * const tools = await mcpClient.listTools();
+         * console.log(tools.tools.length); // 20+ available tools
+         *
+         * // Find specific tool
+         * const researchTool = tools.tools.find(t => t.name === 'perform_research');
+         * console.log(researchTool.description); // Tool description
+         * ```
+         *
+         * @mcp-endpoint
+         * @category Tools
+         */
+        this.server.setRequestHandler(ListToolsRequestSchema, async () => {
+            return getToolListForMCP({ mode: 'full' });
+        });
+        /**
+         * Call Tool Handler - MCP Protocol Endpoint
+         */
+        this.server.setRequestHandler(CallToolRequestSchema, async (request) => {
+            const { name, arguments: args } = request.params;
+            // Create context for progress notifications and logging
+            const context = {
+                info: (message) => {
+                    this.logger.info(message);
+                    // Note: MCP progress notifications will be available in future SDK versions
+                    // For now, we log to server console for visibility
+                },
+                report_progress: (progress, total) => {
+                    const percentage = total ? Math.round((progress / total) * 100) : progress;
+                    this.logger.info(`Progress: ${percentage}%${total ? ` (${progress}/${total})` : ''}`);
+                },
+                warn: (message) => {
+                    this.logger.warn(message);
+                },
+                error: (message) => {
+                    this.logger.error(message);
+                },
+            };
+            try {
+                const safeArgs = args || {};
+                // CE-MCP Mode: Check if tool should return directive instead of executing
+                const aiConfig = loadAIConfig();
+                if (isCEMCPEnabled(aiConfig) &&
+                    shouldUseCEMCPDirective(name, { mode: aiConfig.executionMode })) {
+                    const directive = getCEMCPDirective(name, safeArgs);
+                    if (directive) {
+                        this.logger.info(`[CE-MCP] Returning directive for tool: ${name}`);
+                        const directiveResponse = formatDirectiveResponse(directive);
+                        // Record BEFORE returning. This early return skips the dispatch
+                        // switch below and, with it, the trackToolExecution call on the
+                        // success path -- so every tool in CE_MCP_DIRECTIVE_TOOLS was
+                        // invisible to usage tracking whenever CE-MCP mode was on. All
+                        // twelve of them, including `perform_research`, whose disposition
+                        // ADR-023 defers *pending usage data*. See #1489.
+                        //
+                        // Deliberately not fatal: a directive is the tool's real answer, and
+                        // failing to record it must never withhold it. trackToolExecution
+                        // already swallows and warns internally; the catch here covers a
+                        // throw before that boundary.
+                        try {
+                            await this.trackToolExecution(name, args, directiveResponse, true);
+                        }
+                        catch (trackingError) {
+                            this.logger.warn(`[CE-MCP] Usage tracking failed for ${name}: ${trackingError instanceof Error ? trackingError.message : String(trackingError)}`);
+                        }
+                        return directiveResponse;
+                    }
+                    // Fall through to legacy execution if no directive available
+                    this.logger.info(`[CE-MCP] No directive available for ${name}, using legacy path`);
+                }
+                const response = await dispatchTool(this, name, safeArgs, context);
+                // Track tool execution in knowledge graph
+                await this.trackToolExecution(name, args, response, true);
+                // Apply state reinforcement (Phase 2: Context Decay Mitigation) and content masking
+                // Also record conversation turn (Phase 3: Structured External Memory)
+                return await this.enrichResponseWithStateReinforcement(response, name, args);
+            }
+            catch (error) {
+                // Track failed execution
+                await this.trackToolExecution(name, args, {}, false, error instanceof Error ? error.message : String(error));
+                if (error instanceof McpAdrError) {
+                    throw error;
+                }
+                throw new McpAdrError(`Tool execution failed: ${error instanceof Error ? error.message : String(error)}`, 'TOOL_EXECUTION_ERROR');
+            }
+        });
+        /**
+         * List Resources Handler - MCP Protocol Endpoint
+         *
+         * @description Returns available resources for client access including the
+         * architectural knowledge graph and project analysis data. Resources provide
+         * read-only access to server-managed data structures.
+         *
+         * @returns {Promise<{resources: Array}>} Available resources with URIs and descriptions
+         *
+         * @example
+         * ```typescript
+         * // List available resources
+         * const resources = await mcpClient.listResources();
+         * console.log(resources.resources.length); // Available resources
+         *
+         * // Find knowledge graph resource
+         * const kgResource = resources.resources.find(r =>
+         *   r.uri === 'adr://architectural_knowledge_graph'
+         * );
+         * console.log(kgResource.name); // "Architectural Knowledge Graph"
+         * ```
+         *
+         * @mcp-endpoint
+         * @category Resources
+         */
+        this.server.setRequestHandler(ListResourcesRequestSchema, async () => {
+            return {
+                resources: [
+                    // Existing resources (refactored to return data)
+                    {
+                        uri: 'adr://architectural_knowledge_graph',
+                        name: 'Architectural Knowledge Graph',
+                        description: 'Complete architectural knowledge graph with technologies, patterns, and relationships',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://analysis_report',
+                        name: 'Analysis Report',
+                        description: 'Comprehensive project analysis report with metrics and recommendations',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://adr_list',
+                        name: 'ADR List',
+                        description: 'List of all Architectural Decision Records with status and metadata',
+                        mimeType: 'application/json',
+                    },
+                    // NEW Phase 1 Resources
+                    {
+                        uri: 'adr://todo_list',
+                        name: 'Todo List',
+                        description: 'Current project task list with status, priorities, and dependencies',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://research_index',
+                        name: 'Research Index',
+                        description: 'Index of all research documents and findings with metadata',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://rule_catalog',
+                        name: 'Rule Catalog',
+                        description: 'Catalog of all architectural and validation rules from ADRs and code',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://rule_generation',
+                        name: 'Rule Generation',
+                        description: 'AI-powered rule generation from ADRs and code patterns. Supports query parameters: ?operation=generate|validate|create_set, ?source=adrs|patterns|both, ?knowledge=true|false, ?enhanced=true|false, ?format=json|yaml|both, ?comprehensive=true|false',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://project_status',
+                        name: 'Project Status',
+                        description: 'Current project status and health metrics aggregated from all sources',
+                        mimeType: 'application/json',
+                    },
+                    // NEW Phase 2 Templated Resources
+                    {
+                        uri: 'adr://adr/{id}',
+                        name: 'ADR by ID',
+                        description: 'Individual Architectural Decision Record by ID or title match',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://research/{topic}',
+                        name: 'Research by Topic',
+                        description: 'Research documents filtered by topic with full content',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://todo/{task_id}',
+                        name: 'Todo by Task ID',
+                        description: 'Individual task details by ID or title match with dependencies and history',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://rule/{rule_id}',
+                        name: 'Rule by ID',
+                        description: 'Individual architectural rule by ID or name match with violations and usage stats',
+                        mimeType: 'application/json',
+                    },
+                    // NEW Phase 3 Advanced Resources
+                    {
+                        uri: 'adr://deployment_status',
+                        name: 'Deployment Status',
+                        description: 'Current deployment state with health checks, build status, and readiness score',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://environment_analysis',
+                        name: 'Environment Analysis',
+                        description: 'System environment details including platform, dependencies, and capabilities',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://memory_snapshots',
+                        name: 'Memory Snapshots',
+                        description: 'Knowledge graph snapshots with statistics, insights, and relationship data',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://project_metrics',
+                        name: 'Project Metrics',
+                        description: 'Code metrics and quality scores including codebase stats, quality assessment, and git metrics',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://technology/{name}',
+                        name: 'Technology by Name',
+                        description: 'Individual technology analysis by name with usage, relationships, and adoption status',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://pattern/{name}',
+                        name: 'Pattern by Name',
+                        description: 'Individual pattern analysis by name with quality metrics, relationships, and examples',
+                        mimeType: 'application/json',
+                    },
+                    // NEW Phase 4 Final Resources
+                    {
+                        uri: 'adr://deployment_history',
+                        name: 'Deployment History',
+                        description: 'Historical deployment data with trends, failure analysis, and patterns. Supports query parameters: ?period=7d|30d|90d|1y|all, ?environment=production|staging|development|all, ?includeFailures=true|false, ?includeMetrics=true|false, ?format=summary|detailed',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://release_history',
+                        name: 'Release History',
+                        description: 'Release tracking state with releases mapped to ADRs, milestones, and project metadata. Shows release timeline, ADR-to-release mappings with confidence scores, and unmapped ADRs.',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://code_quality',
+                        name: 'Code Quality',
+                        description: 'Comprehensive code quality assessment with metrics, issues, and recommendations. Supports query parameters: ?scope=full|changes|critical, ?includeMetrics=true|false, ?includeRecommendations=true|false, ?threshold=0-100, ?format=summary|detailed',
+                        mimeType: 'application/json',
+                    },
+                    // NEW Phase 5 Validated Pattern Resources
+                    {
+                        uri: 'adr://validated_patterns',
+                        name: 'Validated Patterns Catalog',
+                        description: 'Complete catalog of validated deployment patterns for different platforms (OpenShift, Kubernetes, Docker, Node.js, Python, MCP, A2A) with bill of materials, deployment phases, validation checks, and authoritative sources',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://validated_pattern/{platform}',
+                        name: 'Validated Pattern by Platform',
+                        description: 'Individual validated pattern by platform type (openshift, kubernetes, docker, nodejs, python, mcp, a2a) with complete bill of materials, deployment phases, validation checks, health checks, and authoritative sources for LLM research',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://pattern_sources/{platform}',
+                        name: 'Pattern Authoritative Sources',
+                        description: 'Authoritative documentation and repository sources for a specific platform pattern, prioritized by importance with query instructions for LLMs',
+                        mimeType: 'application/json',
+                    },
+                    {
+                        uri: 'adr://pattern_base_code/{platform}',
+                        name: 'Pattern Base Code Repository',
+                        description: 'Base code repository information for a platform pattern including URL, integration instructions, required files, and script entrypoint',
+                        mimeType: 'application/json',
+                    },
+                    // NEW Knowledge Graph Resource (ADR-018)
+                    {
+                        uri: 'knowledge://graph',
+                        name: 'Knowledge Graph',
+                        description: 'Read-only knowledge graph structure with nodes (intents, ADRs, tools, code files) and edges (relationships). Zero token cost for querying graph state. Use update_knowledge tool to modify.',
+                        mimeType: 'application/json',
+                    },
+                ],
+            };
+        });
+        /**
+         * Read Resource Handler - MCP Protocol Endpoint
+         *
+         * @description Reads specific resource content by URI. Provides access to
+         * architectural knowledge graphs, project analysis data, and other server-managed
+         * resources with appropriate content masking applied.
+         *
+         * @param {ReadResourceRequest} request - MCP resource read request
+         * @param {string} request.params.uri - Resource URI to read
+         *
+         * @returns {Promise<ReadResourceResult>} Resource content with metadata
+         *
+         * @throws {McpAdrError} When resource URI is invalid or access fails
+         *
+         * @example
+         * ```typescript
+         * // Read knowledge graph resource
+         * const kgData = await mcpClient.readResource(
+         *   'adr://architectural_knowledge_graph'
+         * );
+         * console.log(kgData.contents); // Knowledge graph JSON
+         * ```
+         *
+         * @mcp-endpoint
+         * @category Resources
+         */
+        this.server.setRequestHandler(ReadResourceRequestSchema, async (request) => {
+            const { uri } = request.params;
+            try {
+                const response = await this.readResource(uri);
+                return await this.applyOutputMasking(response);
+            }
+            catch (error) {
+                if (error instanceof McpAdrError) {
+                    throw error;
+                }
+                throw new McpAdrError(`Resource reading failed: ${error instanceof Error ? error.message : String(error)}`, 'RESOURCE_ERROR');
+            }
+        });
+        /**
+         * List Prompts Handler - MCP Protocol Endpoint
+         *
+         * @description Returns available prompt templates for ADR analysis, research,
+         * and architectural decision support. Prompts can be executed directly or
+         * used as templates for custom implementations.
+         *
+         * @returns {Promise<{prompts: Array}>} Available prompt templates with metadata
+         *
+         * @example
+         * ```typescript
+         * // List available prompts
+         * const prompts = await mcpClient.listPrompts();
+         * console.log(prompts.prompts.length); // Available prompt templates
+         *
+         * // Find ADR analysis prompt
+         * const adrPrompt = prompts.prompts.find(p =>
+         *   p.name === 'adr_analysis_prompt'
+         * );
+         * console.log(adrPrompt.description); // Prompt description
+         * ```
+         *
+         * @mcp-endpoint
+         * @category Prompts
+         */
+        this.server.setRequestHandler(ListPromptsRequestSchema, async () => {
+            const { allPrompts } = await import('./prompts/index.js');
+            return {
+                prompts: allPrompts.map(prompt => ({
+                    name: prompt.name,
+                    description: prompt.description,
+                    arguments: prompt.arguments,
+                })),
+            };
+        });
+        /**
+         * Get Prompt Handler - MCP Protocol Endpoint
+         *
+         * @description Executes specific prompt templates with provided arguments.
+         * Returns formatted prompts ready for AI execution or further processing.
+         * Supports dynamic argument injection and template customization.
+         *
+         * @param {GetPromptRequest} request - MCP prompt execution request
+         * @param {string} request.params.name - Prompt template name
+         * @param {Object} request.params.arguments - Template-specific arguments
+         *
+         * @returns {Promise<GetPromptResult>} Formatted prompt with metadata
+         *
+         * @throws {McpAdrError} When prompt template is not found or arguments are invalid
+         *
+         * @example
+         * ```typescript
+         * // Execute ADR analysis prompt
+         * const prompt = await mcpClient.getPrompt('adr_analysis_prompt', {
+         *   adrPath: 'docs/adrs/0001-auth.md',
+         *   projectContext: 'microservices architecture'
+         * });
+         *
+         * console.log(prompt.messages); // Formatted prompt messages
+         * ```
+         *
+         * @example
+         * ```typescript
+         * // Execute research prompt
+         * const researchPrompt = await mcpClient.getPrompt('research_question_prompt', {
+         *   domain: 'authentication',
+         *   complexity: 'advanced'
+         * });
+         *
+         * console.log(researchPrompt.messages[0].content); // Research prompt
+         * ```
+         *
+         * @mcp-endpoint
+         * @category Prompts
+         * @category Execution
+         */
+        this.server.setRequestHandler(GetPromptRequestSchema, async (request) => {
+            const { name, arguments: args } = request.params;
+            try {
+                const { allPrompts } = await import('./prompts/index.js');
+                const prompt = allPrompts.find(p => p.name === name);
+                if (!prompt) {
+                    throw new McpAdrError(`Unknown prompt: ${name}`, 'UNKNOWN_PROMPT');
+                }
+                // Simple template rendering (replace {{variable}} with values)
+                let renderedTemplate = prompt.template;
+                if (args) {
+                    for (const [key, value] of Object.entries(args)) {
+                        const regex = new RegExp(`{{${key}}}`, 'g');
+                        renderedTemplate = renderedTemplate.replace(regex, String(value));
+                    }
+                }
+                const response = {
+                    description: prompt.description,
+                    messages: [
+                        {
+                            role: 'user',
+                            content: {
+                                type: 'text',
+                                text: renderedTemplate,
+                            },
+                        },
+                    ],
+                };
+                return await this.applyOutputMasking(response);
+            }
+            catch (error) {
+                if (error instanceof McpAdrError) {
+                    throw error;
+                }
+                throw new McpAdrError(`Prompt execution failed: ${error instanceof Error ? error.message : String(error)}`, 'PROMPT_EXECUTION_ERROR');
+            }
+        });
+    }
+    /**
+     * Tool implementations
+     */
+    async checkAIExecutionStatus(_args) {
+        try {
+            const { getAIExecutionStatus } = await import('./utils/prompt-execution.js');
+            const status = getAIExecutionStatus();
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: `# AI Execution Status Diagnostic
+
+> **Note**: As of Phase 5, this server uses CE-MCP (Claude-Enriched MCP) mode by default.
+> In CE-MCP mode, tools return orchestration directives that the host LLM executes directly,
+> eliminating the need for external API calls. The configuration below applies to legacy mode only.
+
+## Current Configuration
+- **AI Execution Enabled**: ${status.isEnabled ? '✅ YES' : '❌ NO'}
+- **Has API Key**: ${status.hasApiKey ? '✅ YES' : '❌ NO'}
+- **Execution Mode**: ${status.executionMode}
+- **AI Model**: ${status.model}
+
+${
+                        // CE-MCP is the DEFAULT mode and needs no API key. Reporting the absence of
+                        // one as an "Issue Detected" -- immediately after saying no external API call
+                        // is needed -- told every new user to go and buy a key they do not need.
+                        // Legacy configuration is only a problem for someone who asked for it. (#1414)
+                        status.executionMode === 'ce-mcp'
+                            ? `## ✅ Running in CE-MCP mode
+
+No API key is required. Tools return orchestration directives that your host LLM
+executes directly, which is why **AI Execution Enabled: NO** above is expected and
+correct rather than a fault.
+
+Note that only some tools currently return a directive; the rest return their
+result directly. See ADR-014 and ADR-021.
+
+Legacy OpenRouter execution is off by design. You only need the configuration
+below if you deliberately want that older path.`
+                            : status.reason
+                                ? `## ⚠️ Issue Detected
+**Problem**: ${status.reason}
+
+## Solution
+${!status.hasApiKey
+                                    ? `
+1. Get an OpenRouter API key from https://openrouter.ai/keys
+2. Add it to your MCP configuration:
+   \`\`\`json
+   {
+     "mcpServers": {
+       "adr-analysis": {
+         "command": "mcp-adr-analysis-server",
+         "env": {
+           "OPENROUTER_API_KEY": "your_api_key_here",
+           "EXECUTION_MODE": "full",
+           "AI_MODEL": "anthropic/claude-3-sonnet"
+         }
+       }
+     }
+   }
+   \`\`\`
+3. Restart your MCP client (Claude Desktop, etc.)
+`
+                                    : status.executionMode !== 'full'
+                                        ? `
+1. Update your MCP configuration to set EXECUTION_MODE to "full":
+   \`\`\`json
+   {
+     "mcpServers": {
+       "adr-analysis": {
+         "env": {
+           "EXECUTION_MODE": "full"
+         }
+       }
+     }
+   }
+   \`\`\`
+2. Restart your MCP client
+`
+                                        : ''}`
+                                : `## ✅ Configuration Looks Good!
+
+AI execution is properly configured. Tools should return actual results instead of prompts.
+
+If you're still seeing prompts instead of results, try:
+1. Restart your MCP client
+2. Check your OpenRouter API key has sufficient credits
+3. Verify network connectivity to OpenRouter.ai`}
+
+## Environment Variables Expected
+- **OPENROUTER_API_KEY**: Your OpenRouter API key
+- **EXECUTION_MODE**: Set to "full" for AI execution
+- **AI_MODEL**: AI model to use (optional, defaults to claude-3-sonnet)
+
+## Testing
+After fixing the configuration, try calling \`suggest_adrs\` - it should return actual ADR suggestions instead of prompts.
+`,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: `# AI Execution Status Check Failed
+
+**Error**: ${error instanceof Error ? error.message : String(error)}
+
+This diagnostic tool helps identify why tools return prompts instead of actual results.
+
+## Manual Check
+Verify these environment variables are set in your MCP configuration:
+- OPENROUTER_API_KEY
+- EXECUTION_MODE=full
+- AI_MODEL (optional)
+`,
+                    },
+                ],
+            };
+        }
+    }
+    async getWorkflowGuidance(args) {
+        const { goal, projectContext, availableAssets = [], timeframe = 'thorough_review', primaryConcerns = [], } = args;
+        try {
+            const workflowPrompt = `
+# Workflow Guidance & Tool Recommendation System
+
+## User Context Analysis
+- **Goal**: ${goal}
+- **Project Context**: ${projectContext}
+- **Available Assets**: ${availableAssets.length > 0 ? availableAssets.join(', ') : 'None specified'}
+- **Timeframe**: ${timeframe}
+- **Primary Concerns**: ${primaryConcerns.length > 0 ? primaryConcerns.join(', ') : 'General analysis'}
+
+## Available MCP Tools (24 Total)
+
+### 🎯 **Core Analysis Tools** (AI-Powered ✅)
+1. **analyze_project_ecosystem** - Comprehensive technology and pattern detection
+2. **get_architectural_context** - Generate intelligent architectural insights + ADR setup
+3. **generate_adrs_from_prd** - Convert requirements to structured ADRs
+4. **analyze_content_security** - Detect sensitive information patterns
+
+### 📋 **ADR Management Tools** (AI-Powered ✅)
+5. **suggest_adrs** - Auto-suggest ADRs from implicit decisions
+6. **generate_adr_from_decision** - Create ADRs from specific decisions
+7. **discover_existing_adrs** - Intelligent ADR discovery and analysis
+
+### 🔍 **Research & Documentation Tools** (AI-Powered ✅)
+8. **generate_research_questions** - Create context-aware research questions
+9. **incorporate_research** - Integrate research findings into decisions
+10. **create_research_template** - Generate research documentation templates
+
+### 🛡️ **Security & Compliance Tools** (AI-Powered ✅)
+11. **generate_content_masking** - Intelligent content masking and protection
+12. **configure_custom_patterns** - Customize security and masking settings
+13. **apply_basic_content_masking** - Basic content masking (fallback)
+14. **validate_content_masking** - Validate masking effectiveness
+
+### 🏗️ **Rule & Governance Tools** (AI-Powered ✅)
+16. **generate_rules** - Extract architectural rules from ADRs
+17. **validate_rules** - Validate code against architectural rules
+18. **create_rule_set** - Create comprehensive rule management systems
+
+### 🚀 **Deployment & Environment Tools** (AI-Powered ✅)
+19. **analyze_environment** - Environment analysis and optimization
+20. **analyze_deployment_progress** - Deployment tracking and verification
+
+### ⚙️ **Utility & Management Tools**
+21. **manage_cache** - Cache management and optimization
+22. **configure_output_masking** - Configure global output masking
+23. **request_action_confirmation** - Interactive user confirmation workflows
+24. **get_workflow_guidance** - This tool - intelligent workflow advisor
+
+## Workflow Recommendation Instructions
+
+Based on the user's goal, project context, available assets, timeframe, and concerns, provide:
+
+### 1. **Recommended Tool Sequence**
+Provide a step-by-step workflow with:
+- **Tool Name**: Exact tool to call
+- **Purpose**: Why this tool is needed
+- **Expected Outcome**: What it will deliver
+- **Parameters**: Suggested parameters for the tool call
+- **Success Criteria**: How to know it worked
+
+### 2. **Alternative Workflows**
+Provide 2-3 alternative approaches based on:
+- Different time constraints
+- Different priorities
+- Different starting points
+
+### 3. **Expected Timeline & Effort**
+For each recommended workflow:
+- **Estimated Time**: How long each step takes
+- **Effort Level**: Low/Medium/High effort required
+- **Dependencies**: Which steps must be completed first
+
+### 4. **Success Metrics**
+Define how to measure success:
+- **Immediate Indicators**: Quick wins and early signals
+- **Progress Milestones**: Key checkpoints
+- **Final Outcomes**: Ultimate success criteria
+
+### 5. **Common Pitfalls & Tips**
+- **What to Avoid**: Common mistakes in this workflow
+- **Pro Tips**: Best practices for maximum effectiveness
+- **Troubleshooting**: What to do if steps fail
+
+## Common Workflow Patterns
+
+### **New Project Setup**
+1. analyze_project_ecosystem → 2. get_architectural_context → 3. suggest_adrs → 4. generate_adr_from_decision
+
+### **Existing Project Analysis**
+1. discover_existing_adrs → 2. get_architectural_context → 3. validate_rules
+
+### **Security Audit**
+1. analyze_content_security → 2. generate_content_masking → 3. configure_custom_patterns → 4. validate_content_masking
+
+### **PRD to Implementation**
+1. generate_adrs_from_prd → 2. analyze_deployment_progress
+
+### **Legacy Modernization**
+1. analyze_project_ecosystem → 2. get_architectural_context → 3. suggest_adrs → 4. generate_rules → 5. validate_rules
+
+## Output Format
+
+Provide a comprehensive workflow guide that includes:
+
+1. **🎯 Recommended Primary Workflow** (step-by-step with tool calls)
+2. **🔄 Alternative Approaches** (2-3 different paths)
+3. **⏱️ Timeline & Effort Estimates** (realistic expectations)
+4. **📊 Success Metrics** (how to measure progress)
+5. **💡 Pro Tips & Best Practices** (maximize effectiveness)
+6. **⚠️ Common Pitfalls** (what to avoid)
+
+Make the guidance **actionable, specific, and outcome-focused** so the user can immediately start executing the recommended workflow.
+`;
+            // Execute the workflow guidance with AI if enabled
+            const { executePromptWithFallback, formatMCPResponse } = await import('./utils/prompt-execution.js');
+            const executionResult = await executePromptWithFallback(workflowPrompt, 'Analyze the user context and provide intelligent workflow guidance with specific tool recommendations.', {
+                temperature: 0.1,
+                maxTokens: 6000,
+                systemPrompt: `You are an expert workflow advisor for the MCP ADR Analysis Server.
+Your role is to analyze user goals and project context, then recommend the optimal sequence of tools to achieve their objectives efficiently.
+Provide specific, actionable guidance with clear tool sequences, expected outcomes, and success criteria.
+Focus on practical workflows that deliver measurable results.`,
+            });
+            if (executionResult.isAIGenerated) {
+                // AI execution successful - return actual workflow guidance
+                return formatMCPResponse({
+                    ...executionResult,
+                    content: `# Workflow Guidance & Tool Recommendations
+
+## Your Context
+- **Goal**: ${goal}
+- **Project Context**: ${projectContext}
+- **Available Assets**: ${availableAssets.length > 0 ? availableAssets.join(', ') : 'None specified'}
+- **Timeframe**: ${timeframe}
+- **Primary Concerns**: ${primaryConcerns.length > 0 ? primaryConcerns.join(', ') : 'General analysis'}
+
+## AI-Generated Workflow Guidance
+
+${executionResult.content}
+
+## Quick Reference: Available Tools
+
+**Core Analysis**: analyze_project_ecosystem, get_architectural_context, generate_adrs_from_prd, analyze_content_security
+**ADR Management**: suggest_adrs, generate_adr_from_decision, discover_existing_adrs
+**Security**: generate_content_masking, configure_custom_patterns, validate_content_masking
+**Governance**: generate_rules, validate_rules, create_rule_set
+**Environment**: analyze_environment, analyze_deployment_progress
+**Utilities**: manage_cache, configure_output_masking, check_ai_execution_status
+
+## Next Steps
+
+1. **Start with the recommended primary workflow** above
+2. **Call the first tool** with the suggested parameters
+3. **Review the results** and proceed to the next step
+4. **Track progress** using the success metrics provided
+5. **Adjust as needed** based on your specific findings
+
+This guidance is tailored to your specific context and goals for maximum effectiveness!
+`,
+                });
+            }
+            else {
+                // Fallback to prompt-only mode
+                return {
+                    content: [
+                        {
+                            type: 'text',
+                            text: workflowPrompt,
+                        },
+                    ],
+                };
+            }
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to generate workflow guidance: ${error instanceof Error ? error.message : String(error)}`, 'WORKFLOW_ERROR');
+        }
+    }
+    async getDevelopmentGuidance(args) {
+        const { developmentPhase, adrsToImplement = [], technologyStack = [], currentProgress = '', teamContext = { size: 'small_team', experienceLevel: 'mixed' }, timeline = '', focusAreas = [], } = args;
+        try {
+            // Use actual ADR discovery if ADRs are specified
+            let adrAnalysisPrompt = '';
+            if (adrsToImplement.length > 0) {
+                const { getAdrDirectoryPath } = await import('./utils/config.js');
+                const { discoverAdrsInDirectory } = await import('./utils/adr-discovery.js');
+                const absoluteAdrPath = getAdrDirectoryPath(this.config);
+                const discoveryResult = await discoverAdrsInDirectory(absoluteAdrPath, this.config.projectPath, {
+                    includeContent: true,
+                    includeTimeline: false,
+                });
+                // Filter ADRs to only those specified for implementation
+                const targetAdrs = discoveryResult.adrs.filter(adr => adrsToImplement.some((target) => adr.title.toLowerCase().includes(target.toLowerCase()) ||
+                    adr.filename.toLowerCase().includes(target.toLowerCase())));
+                adrAnalysisPrompt = `
+## ADR Analysis for Implementation
+
+**ADRs to Implement**: ${adrsToImplement.join(', ')}
+**ADR Directory**: ${absoluteAdrPath}
+**Found ${targetAdrs.length} matching ADRs**
+
+${targetAdrs
+                    .map(adr => `
+### ${adr.title}
+- **File**: ${adr.filename}
+- **Status**: ${adr.status}
+- **Context**: ${adr.context}
+- **Decision**: ${adr.decision}
+- **Consequences**: ${adr.consequences}
+`)
+                    .join('\n')}
+`;
+            }
+            const developmentPrompt = `
+# Development Guidance & Implementation Roadmap
+
+## Development Context
+- **Development Phase**: ${developmentPhase}
+- **Technology Stack**: ${technologyStack.length > 0 ? technologyStack.join(', ') : 'Not specified'}
+- **Current Progress**: ${currentProgress || 'Starting fresh'}
+- **Team Size**: ${teamContext.size}
+- **Team Experience**: ${teamContext.experienceLevel}
+- **Timeline**: ${timeline || 'Not specified'}
+- **Focus Areas**: ${focusAreas.length > 0 ? focusAreas.join(', ') : 'General development'}
+
+${adrAnalysisPrompt}
+
+## Development Guidance Instructions
+
+Based on the development context, ADRs to implement, and technology stack, provide comprehensive development guidance including:
+
+### 1. **Implementation Roadmap**
+Create a detailed development plan with:
+- **Phase-by-Phase Breakdown**: Logical development phases
+- **Task Prioritization**: Order tasks by dependencies and impact
+- **Milestone Definition**: Clear checkpoints and deliverables
+- **Risk Assessment**: Potential blockers and mitigation strategies
+
+### 2. **Code Structure & Architecture**
+Provide specific guidance on:
+- **Project Structure**: How to organize code files and directories
+- **Module Architecture**: How to structure components/modules
+- **Design Patterns**: Which patterns to use and where
+- **Code Organization**: Separation of concerns and layering
+
+### 3. **Implementation Patterns & Best Practices**
+For each technology in the stack, provide:
+- **Framework-Specific Patterns**: Best practices for the chosen frameworks
+- **API Design**: How to structure APIs and endpoints
+- **Data Layer**: Database schema and data access patterns
+- **State Management**: How to handle application state
+- **Error Handling**: Consistent error handling strategies
+
+### 4. **ADR-to-Code Translation**
+For each ADR to implement:
+- **Implementation Tasks**: Specific coding tasks derived from the ADR
+- **Code Examples**: Pseudo-code or pattern examples
+- **Integration Points**: How this ADR affects other parts of the system
+- **Validation Criteria**: How to verify the ADR is properly implemented
+
+### 5. **Testing Strategy**
+Comprehensive testing approach:
+- **Unit Testing**: What to test and how
+- **Integration Testing**: API and component integration tests
+- **End-to-End Testing**: User workflow testing
+- **Performance Testing**: Load and performance validation
+- **Security Testing**: Security validation approaches
+
+### 6. **Development Workflow**
+Team-specific guidance:
+- **Git Workflow**: Branching strategy and code review process
+- **CI/CD Pipeline**: Automated testing and deployment
+- **Code Quality**: Linting, formatting, and quality gates
+- **Documentation**: What to document and how
+
+### 7. **Quality Gates & Checkpoints**
+Define success criteria:
+- **Code Quality Metrics**: Coverage, complexity, maintainability
+- **Performance Benchmarks**: Response times, throughput targets
+- **Security Checkpoints**: Security validation at each phase
+- **Architectural Compliance**: Adherence to ADR decisions
+
+### 8. **Technology-Specific Implementation**
+For each technology in the stack, provide:
+- **Setup Instructions**: Environment and tooling setup
+- **Configuration**: Framework and tool configuration
+- **Optimization**: Performance and build optimization
+- **Deployment**: Technology-specific deployment considerations
+
+## Expected Output Format
+
+Provide a comprehensive development guide that includes:
+
+### 📋 **1. Development Roadmap**
+- **Phase 1-N**: Logical development phases with tasks
+- **Dependencies**: Task dependencies and critical path
+- **Timeline**: Estimated effort and duration
+- **Milestones**: Key deliverables and checkpoints
+
+### 🏗️ **2. Implementation Guide**
+- **Code Structure**: Detailed project organization
+- **Design Patterns**: Specific patterns to implement
+- **API Design**: Endpoint structure and conventions
+- **Data Architecture**: Database and data flow design
+
+### 🧪 **3. Testing & Quality Strategy**
+- **Test Types**: Unit, integration, e2e testing approach
+- **Quality Gates**: Code quality and performance criteria
+- **Automation**: CI/CD and automated testing setup
+
+### 🚀 **4. Deployment & Operations**
+- **Environment Setup**: Development, staging, production
+- **Deployment Pipeline**: Automated deployment process
+- **Monitoring**: Logging, metrics, and alerting
+- **Maintenance**: Ongoing maintenance and updates
+
+### 📊 **5. Progress Tracking**
+- **Success Metrics**: How to measure development progress
+- **Quality Indicators**: Code quality and performance metrics
+- **Milestone Validation**: How to verify milestone completion
+- **Risk Monitoring**: Early warning signs and mitigation
+
+### 💡 **6. Team-Specific Recommendations**
+Based on team size (${teamContext.size}) and experience (${teamContext.experienceLevel}):
+- **Workflow Adaptations**: Process adjustments for team context
+- **Skill Development**: Areas for team skill building
+- **Tool Recommendations**: Development tools and practices
+- **Communication**: Coordination and documentation practices
+
+## Integration with Architectural Decisions
+
+Ensure all development guidance:
+- **Aligns with ADRs**: Every recommendation supports architectural decisions
+- **Maintains Consistency**: Consistent patterns across the codebase
+- **Enables Evolution**: Flexible design for future changes
+- **Supports Quality**: Built-in quality and maintainability
+
+Make the guidance **actionable, specific, and immediately implementable** so developers can start coding with confidence and architectural alignment.
+`;
+            // Execute the development guidance with AI if enabled
+            const { executePromptWithFallback, formatMCPResponse } = await import('./utils/prompt-execution.js');
+            const executionResult = await executePromptWithFallback(developmentPrompt, 'Analyze the development context and provide comprehensive implementation guidance that translates architectural decisions into specific coding tasks and development roadmap.', {
+                temperature: 0.1,
+                maxTokens: 8000,
+                systemPrompt: `You are an expert software development advisor specializing in translating architectural decisions into practical implementation guidance.
+Your role is to bridge the gap between architectural planning and actual code development.
+Provide specific, actionable development guidance with clear implementation steps, code patterns, and quality criteria.
+Focus on practical guidance that ensures architectural decisions are properly implemented in code.
+Consider team context, technology stack, and development phase to provide tailored recommendations.`,
+            });
+            if (executionResult.isAIGenerated) {
+                // AI execution successful - return actual development guidance
+                return formatMCPResponse({
+                    ...executionResult,
+                    content: `# Development Guidance & Implementation Roadmap
+
+## Your Development Context
+- **Development Phase**: ${developmentPhase}
+- **Technology Stack**: ${technologyStack.length > 0 ? technologyStack.join(', ') : 'Not specified'}
+- **Current Progress**: ${currentProgress || 'Starting fresh'}
+- **Team Context**: ${teamContext.size} team with ${teamContext.experienceLevel} experience
+- **Timeline**: ${timeline || 'Not specified'}
+- **Focus Areas**: ${focusAreas.length > 0 ? focusAreas.join(', ') : 'General development'}
+- **ADRs to Implement**: ${adrsToImplement.length > 0 ? adrsToImplement.join(', ') : 'None specified'}
+
+## AI-Generated Development Guidance
+
+${executionResult.content}
+
+## Integration with Workflow Tools
+
+This development guidance works seamlessly with other MCP tools:
+
+### **Workflow Integration**
+1. **get_workflow_guidance** → Recommends architectural process
+2. **get_development_guidance** → Guides implementation (this tool)
+3. **validate_rules** → Ensures code follows architectural decisions
+4. **analyze_deployment_progress** → Tracks implementation progress
+
+### **Quality Assurance Tools**
+- **generate_rules** → Extract coding standards from ADRs
+- **validate_rules** → Validate code against architectural rules
+- **analyze_content_security** → Security validation during development
+
+### **Documentation Tools**
+- **discover_existing_adrs** → Reference existing architectural decisions
+
+## Next Steps: From Architecture to Code
+
+1. **📋 Review the Development Roadmap** above
+2. **🏗️ Set Up Project Structure** as recommended
+3. **🧪 Implement Testing Strategy** early in development
+4. **📊 Track Progress** using the success metrics provided
+5. **🔄 Iterate and Refine** based on implementation learnings
+
+This guidance ensures your development work is **architecturally aligned**, **quality-focused**, and **efficiently executed**!
+`,
+                });
+            }
+            else {
+                // Fallback to prompt-only mode
+                return {
+                    content: [
+                        {
+                            type: 'text',
+                            text: developmentPrompt,
+                        },
+                    ],
+                };
+            }
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to generate development guidance: ${error instanceof Error ? error.message : String(error)}`, 'DEVELOPMENT_ERROR');
+        }
+    }
+    async analyzeProjectEcosystem(args, context) {
+        const ctx = context || createNoOpContext();
+        // Use configured project path if not provided in args
+        const projectPath = args.projectPath || this.config.projectPath;
+        const { includePatterns, enhancedMode = getEnhancedModeDefault(), // Environment-aware default
+        knowledgeEnhancement = getKnowledgeEnhancementDefault(), // Environment-aware default
+        learningEnabled = true, technologyFocus = [], analysisDepth = 'comprehensive', includeEnvironment = true, recursiveDepth = 'comprehensive', analysisScope = [],
+        // conversationContext - TODO: implement context integration for ecosystem analysis
+         } = args;
+        this.logger.info(`Generating comprehensive ecosystem analysis for project at: ${projectPath}`);
+        this.logger.info(`Analysis configuration - Depth: ${analysisDepth}, Recursive: ${recursiveDepth}, Environment: ${includeEnvironment}`);
+        this.logger.info(`Enhancement features - Knowledge: ${knowledgeEnhancement}, Learning: ${learningEnabled}`);
+        this.logger.info(`Analysis scope: ${analysisScope.length > 0 ? analysisScope.join(', ') : 'Full ecosystem analysis'}`);
+        ctx.info(`🌐 Starting comprehensive ecosystem analysis: ${projectPath}`);
+        ctx.report_progress(0, 100);
+        try {
+            ctx.info('📊 Phase 1: Analyzing project structure');
+            ctx.report_progress(10, 100);
+            // Import utilities dynamically to avoid circular dependencies
+            const { analyzeProjectStructureCompat: analyzeProjectStructure } = await import('./utils/file-system.js');
+            // Initialize ADR knowledge base on first run
+            ctx.info('📚 Phase 1.5: Initializing ADR knowledge base');
+            ctx.report_progress(15, 100);
+            try {
+                const { initializeAdrKnowledgeBase, isAdrKnowledgeBaseInitialized } = await import('./utils/adr-knowledge-initializer.js');
+                const isInitialized = await isAdrKnowledgeBaseInitialized(this.kgManager);
+                if (!isInitialized) {
+                    this.logger.info('First run detected - initializing ADR knowledge base');
+                    const initResult = await initializeAdrKnowledgeBase(this.kgManager, this.config.adrDirectory, projectPath);
+                    if (initResult.success) {
+                        this.logger.info(`✅ ADR knowledge base initialized with ${initResult.adrsIndexed} ADRs`);
+                        ctx.info(`📚 Indexed ${initResult.adrsIndexed} existing ADRs to knowledge base`);
+                    }
+                    else {
+                        this.logger.warn(`ADR knowledge base initialization completed with errors: ${initResult.errors.join(', ')}`);
+                    }
+                }
+                else {
+                    this.logger.info('ADR knowledge base already initialized - skipping');
+                }
+            }
+            catch (error) {
+                this.logger.warn('Failed to initialize ADR knowledge base:', error);
+                // Don't fail the entire analysis if ADR initialization fails
+            }
+            // DEPRECATED: Legacy context assembly for enhanced mode
+            // This section is part of the OpenRouter execution path and will be removed
+            // in a future release. For CE-MCP mode, use createAnalyzeProjectEcosystemDirective()
+            // from src/tools/ce-mcp-tools.ts instead. See ADR-014.
+            let generateArchitecturalKnowledge = null;
+            let executeWithReflexion = null;
+            let retrieveRelevantMemories = null;
+            let createToolReflexionConfig = null;
+            if (enhancedMode) {
+                if (knowledgeEnhancement) {
+                    const knowledgeModule = await import('./utils/knowledge-generation.js');
+                    generateArchitecturalKnowledge = knowledgeModule.generateArchitecturalKnowledge;
+                }
+                if (learningEnabled) {
+                    const reflexionModule = await import('./utils/reflexion.js');
+                    executeWithReflexion = reflexionModule.executeWithReflexion;
+                    retrieveRelevantMemories = reflexionModule.retrieveRelevantMemories;
+                    createToolReflexionConfig = reflexionModule.createToolReflexionConfig;
+                }
+            }
+            // Step 1: Generate technology-specific knowledge if enabled
+            ctx.info('🧠 Phase 2: Generating architectural knowledge');
+            ctx.report_progress(25, 100);
+            let knowledgeContext = '';
+            if (enhancedMode && knowledgeEnhancement && generateArchitecturalKnowledge) {
+                try {
+                    const knowledgeResult = await generateArchitecturalKnowledge({
+                        projectPath,
+                        technologies: technologyFocus,
+                        patterns: [],
+                        projectType: 'ecosystem-analysis',
+                        existingAdrs: [],
+                    }, {
+                        domains: this.getEcosystemAnalysisDomains(technologyFocus),
+                        depth: analysisDepth === 'basic' ? 'basic' : 'intermediate',
+                        cacheEnabled: true,
+                    });
+                    knowledgeContext = `
+## Technology-Specific Knowledge Enhancement
+
+The following architectural knowledge has been generated to enhance ecosystem analysis:
+
+${knowledgeResult.prompt}
+
+---
+`;
+                }
+                catch (error) {
+                    this.logger.warn('Knowledge generation failed:', error);
+                    knowledgeContext = '<!-- Knowledge generation unavailable -->\n';
+                }
+            }
+            // Step 2: Retrieve relevant memories if learning is enabled
+            let reflexionContext = '';
+            if (enhancedMode && learningEnabled && retrieveRelevantMemories) {
+                try {
+                    const memoryResult = await retrieveRelevantMemories('ecosystem-analysis', { projectPath, analysisDepth, technologyFocus }, { maxResults: 5, relevanceThreshold: 0.6 });
+                    reflexionContext = `
+## Learning from Past Analyses
+
+The following insights from past ecosystem analysis tasks will inform this analysis:
+
+${memoryResult.prompt}
+
+---
+`;
+                }
+                catch (error) {
+                    this.logger.warn('Reflexion memory retrieval failed:', error);
+                    reflexionContext = '<!-- Learning context unavailable -->\n';
+                }
+            }
+            // Step 3: Generate base project analysis prompt with recursive depth
+            ctx.info('📁 Phase 3: Scanning project files and structure');
+            ctx.report_progress(40, 100);
+            const baseProjectAnalysisPrompt = await analyzeProjectStructure(projectPath);
+            // Step 4: Generate environment analysis if enabled
+            ctx.info('🔧 Phase 4: Analyzing environment and infrastructure');
+            ctx.report_progress(55, 100);
+            let environmentAnalysisContext = '';
+            if (includeEnvironment) {
+                try {
+                    this.logger.info('Including comprehensive environment analysis in ecosystem analysis');
+                    const { analyzeEnvironment } = await import('./tools/environment-analysis-tool.js');
+                    // Call environment analysis with comprehensive scope
+                    const environmentResult = await analyzeEnvironment({
+                        projectPath,
+                        adrDirectory: this.config.adrDirectory,
+                        analysisType: 'comprehensive',
+                    });
+                    // Extract environment analysis content
+                    if (environmentResult.content && environmentResult.content[0]) {
+                        environmentAnalysisContext = `
+## Integrated Environment Analysis
+
+${environmentResult.content[0].text}
+
+---
+`;
+                    }
+                }
+                catch (error) {
+                    this.logger.warn('Environment analysis integration failed:', error);
+                    environmentAnalysisContext = `
+## Environment Analysis
+<!-- Environment analysis unavailable: ${error instanceof Error ? error.message : 'Unknown error'} -->
+
+---
+`;
+                }
+            }
+            // Step 5: Apply Reflexion execution if learning is enabled
+            ctx.info('🧪 Phase 5: Applying learning and reflexion');
+            ctx.report_progress(70, 100);
+            let enhancedAnalysisPrompt = baseProjectAnalysisPrompt.prompt + environmentAnalysisContext;
+            if (enhancedMode && learningEnabled && executeWithReflexion && createToolReflexionConfig) {
+                try {
+                    const reflexionConfig = createToolReflexionConfig('analyze_project_ecosystem', {
+                        reflectionDepth: analysisDepth === 'basic' ? 'basic' : 'detailed',
+                        evaluationCriteria: ['task-success', 'accuracy', 'completeness'],
+                        learningRate: 0.7,
+                    });
+                    const reflexionResult = await executeWithReflexion({
+                        prompt: baseProjectAnalysisPrompt.prompt + knowledgeContext + environmentAnalysisContext,
+                        instructions: baseProjectAnalysisPrompt.instructions,
+                        context: {
+                            projectPath,
+                            analysisDepth,
+                            recursiveDepth,
+                            technologyFocus,
+                            includePatterns,
+                            includeEnvironment,
+                            analysisScope,
+                            knowledgeEnhanced: knowledgeEnhancement,
+                            learningEnabled: true,
+                        },
+                    }, reflexionConfig);
+                    enhancedAnalysisPrompt = reflexionResult.prompt;
+                }
+                catch (error) {
+                    this.logger.warn('Reflexion execution failed:', error);
+                    enhancedAnalysisPrompt =
+                        baseProjectAnalysisPrompt.prompt + knowledgeContext + environmentAnalysisContext;
+                }
+            }
+            else {
+                enhancedAnalysisPrompt =
+                    baseProjectAnalysisPrompt.prompt + knowledgeContext + environmentAnalysisContext;
+            }
+            // Execute the analysis with AI if enabled, otherwise return prompt
+            ctx.info('🤖 Phase 6: Executing AI-powered ecosystem analysis');
+            ctx.report_progress(85, 100);
+            const { executeEcosystemAnalysisPrompt, formatMCPResponse } = await import('./utils/prompt-execution.js');
+            const executionResult = await executeEcosystemAnalysisPrompt(enhancedAnalysisPrompt, baseProjectAnalysisPrompt.instructions, {
+                temperature: 0.1,
+                maxTokens: 6000,
+            });
+            // Step 6: Record project structure to knowledge graph
+            try {
+                this.logger.info('Recording project structure to knowledge graph');
+                const projectStructureSnapshot = {
+                    projectPath,
+                    analysisDepth,
+                    recursiveDepth,
+                    technologyFocus,
+                    analysisScope,
+                    includeEnvironment,
+                    timestamp: new Date().toISOString(),
+                    structureData: baseProjectAnalysisPrompt.context || {},
+                };
+                await this.kgManager.recordProjectStructure(projectStructureSnapshot);
+                this.logger.info('✅ Project structure recorded to knowledge graph');
+            }
+            catch (kgError) {
+                this.logger.warn('Failed to record project structure to knowledge graph:', kgError);
+                // Don't fail the entire analysis if KG recording fails
+            }
+            ctx.info('✅ Ecosystem analysis completed successfully');
+            ctx.report_progress(100, 100);
+            // Return appropriate response based on execution result
+            if (executionResult.isAIGenerated) {
+                // AI execution successful - return actual analysis results
+                return formatMCPResponse({
+                    ...executionResult,
+                    content: `# Comprehensive Project Ecosystem Analysis Results
+
+## Analysis Configuration
+- **Project Path**: ${projectPath}
+- **Analysis Depth**: ${analysisDepth}
+- **Recursive Depth**: ${recursiveDepth}
+- **Environment Analysis**: ${includeEnvironment ? '✅ Included' : '❌ Excluded'}
+- **Analysis Scope**: ${analysisScope.length > 0 ? analysisScope.join(', ') : 'Full ecosystem analysis'}
+
+## Enhancement Features
+- **Knowledge Generation**: ${enhancedMode && knowledgeEnhancement ? '✅ Enabled' : '❌ Disabled'}
+- **Reflexion Learning**: ${enhancedMode && learningEnabled ? '✅ Enabled' : '❌ Disabled'}
+- **Enhanced Mode**: ${enhancedMode ? '✅ Enabled' : '❌ Disabled'}
+- **Technology Focus**: ${technologyFocus.length > 0 ? technologyFocus.join(', ') : 'Auto-detect'}
+- **Knowledge Graph**: ✅ Project structure recorded
+
+${knowledgeContext}
+
+${reflexionContext}
+
+## Comprehensive Ecosystem Analysis Results
+
+${executionResult.content}
+
+${includeEnvironment
+                        ? `
+
+## Environment Integration Summary
+
+The analysis above includes comprehensive environment analysis covering:
+- **Infrastructure Specifications**: Deployment and runtime environment details
+- **Containerization**: Docker, Kubernetes, and container orchestration analysis
+- **Environment Requirements**: Configuration and dependency requirements
+- **Compliance Assessment**: Security and regulatory compliance evaluation
+
+This integrated approach provides complete understanding of both codebase patterns AND operational environment.
+`
+                        : ''}
+
+## Next Steps: Complete Ecosystem Understanding
+
+Based on the comprehensive analysis above:
+
+### **Immediate Actions**
+1. **Review Ecosystem Overview**: Examine the complete technology stack and environment context
+2. **Assess Integration Points**: Understand how code patterns relate to operational environment
+3. **Identify Critical Dependencies**: Focus on key dependencies between code and infrastructure
+
+### **Strategic Planning**
+4. **Address Architectural Issues**: Prioritize improvements based on both code and environment analysis
+5. **Plan Environment Optimization**: Optimize deployment and operational configurations
+6. **Update Documentation**: Document both architectural decisions and environment specifications
+
+### **Implementation Roadmap**
+7. **Implement Code Improvements**: Execute code-level architectural enhancements
+8. **Optimize Environment**: Improve infrastructure and deployment configurations
+9. **Monitor Integration**: Ensure code and environment changes work together effectively
+
+This comprehensive ecosystem analysis provides the foundation for informed architectural and operational decisions.
+`,
+                });
+            }
+            else {
+                // Fallback to prompt-only mode
+                return {
+                    content: [
+                        {
+                            type: 'text',
+                            text: `# Comprehensive Project Ecosystem Analysis
+
+This comprehensive analysis provides deep recursive project understanding with integrated environment analysis.
+
+## Analysis Configuration
+- **Project Path**: ${projectPath}
+- **Analysis Depth**: ${analysisDepth}
+- **Recursive Depth**: ${recursiveDepth}
+- **Environment Analysis**: ${includeEnvironment ? '✅ Included' : '❌ Excluded'}
+- **Analysis Scope**: ${analysisScope.length > 0 ? analysisScope.join(', ') : 'Full ecosystem analysis'}
+
+## Enhancement Features
+- **Knowledge Generation**: ${enhancedMode && knowledgeEnhancement ? '✅ Enabled' : '❌ Disabled'}
+- **Reflexion Learning**: ${enhancedMode && learningEnabled ? '✅ Enabled' : '❌ Disabled'}
+- **Enhanced Mode**: ${enhancedMode ? '✅ Enabled' : '❌ Disabled'}
+- **Technology Focus**: ${technologyFocus.length > 0 ? technologyFocus.join(', ') : 'Auto-detect'}
+- **Include Patterns**: ${includePatterns?.length ? includePatterns.join(', ') : 'Default patterns'}
+- **Knowledge Graph**: ✅ Project structure recorded
+
+${knowledgeContext}
+
+${reflexionContext}
+
+## Enhanced Analysis Prompt
+
+${enhancedAnalysisPrompt}
+
+## Enhanced Implementation Instructions
+
+${baseProjectAnalysisPrompt.instructions}
+
+### Enhancement-Specific Instructions
+
+${enhancedMode && knowledgeEnhancement
+                                ? `
+#### Knowledge Enhancement
+- Apply technology-specific knowledge to ecosystem analysis
+- Use domain expertise to identify patterns and anti-patterns
+- Leverage architectural best practices for technology stack evaluation
+`
+                                : ''}
+
+${enhancedMode && learningEnabled
+                                ? `
+#### Learning Integration
+- Apply lessons learned from past ecosystem analyses
+- Use memory insights to improve pattern recognition accuracy
+- Incorporate feedback from previous analysis outcomes
+`
+                                : ''}
+
+## Expected Enhanced Output
+
+The enhanced analysis should provide:
+1. **Technology Stack Analysis** with domain knowledge context
+2. **Architectural Pattern Detection** informed by past experiences
+3. **Ecosystem Health Assessment** using learned evaluation criteria
+4. **Improvement Recommendations** based on domain best practices
+5. **Learning Insights** for future analysis improvement
+
+## Quality Assurance
+
+- Ensure analysis leverages all available enhancement features
+- Verify technology-specific knowledge is properly applied
+- Confirm learning insights improve analysis accuracy
+- Validate recommendations align with domain best practices`,
+                        },
+                    ],
+                };
+            }
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to analyze project ecosystem: ${error instanceof Error ? error.message : String(error)}`, 'ANALYSIS_ERROR');
+        }
+    }
+    async getArchitecturalContext(args) {
+        const { filePath, includeCompliance = true } = args;
+        try {
+            const { analyzeProjectStructureCompat: analyzeProjectStructure, fileExistsCompat: fileExists, ensureDirectoryCompat: ensureDirectory, } = await import('./utils/file-system.js');
+            const path = await import('path');
+            // Determine project path
+            const projectPath = filePath
+                ? filePath.split('/').slice(0, -1).join('/')
+                : this.config.projectPath;
+            const adrDirectory = path.join(projectPath, this.config.adrDirectory);
+            // Generate prompts for ADR directory setup
+            const adrDirectoryCheckPrompt = await fileExists(adrDirectory);
+            const adrDirectorySetupPrompt = await ensureDirectory(adrDirectory);
+            // Generate architectural analysis prompt
+            const projectAnalysisPrompt = await analyzeProjectStructure(projectPath);
+            const architecturalPrompt = `
+# Architectural Context Analysis & Project Setup
+
+## Project Overview
+**Project Path**: ${projectPath}
+**Analysis Scope**: ${filePath ? `Specific file: ${filePath}` : 'Entire project'}
+**ADR Directory**: ${this.config.adrDirectory}
+**Include Compliance**: ${includeCompliance ? 'Yes' : 'No'}
+
+## 🚀 ADR Infrastructure Setup
+
+This analysis will include setting up ADR infrastructure if needed:
+
+### ADR Directory Check
+${adrDirectoryCheckPrompt.prompt}
+
+### ADR Directory Setup (if needed)
+${adrDirectorySetupPrompt.prompt}
+
+## Comprehensive Project Analysis
+
+${projectAnalysisPrompt.prompt}
+
+## Enhanced Architectural Focus
+
+Please provide a **comprehensive, outcome-focused analysis** including:
+
+### 1. Technology Stack & Infrastructure Analysis
+- **Core Technologies**: Programming languages, frameworks, runtime environments
+- **Dependencies**: Package managers, third-party libraries, version constraints
+- **Build & Deployment**: CI/CD pipelines, build tools, deployment strategies
+- **Data Layer**: Databases, caching, data storage and retrieval patterns
+
+### 2. Architectural Pattern & Design Analysis
+- **System Architecture**: Monolith, microservices, serverless, hybrid patterns
+- **Code Organization**: Module structure, separation of concerns, layering
+- **API Design**: REST, GraphQL, RPC patterns and conventions
+- **Data Flow**: Request/response cycles, event handling, state management
+${filePath ? `- **File-specific Context**: How ${filePath} fits into the overall architecture` : ''}
+
+### 3. Quality, Security & Performance Assessment
+- **Code Quality**: Structure, naming, documentation, testing strategies
+- **Security Implementation**: Authentication, authorization, data protection
+- **Performance Patterns**: Caching, optimization, scalability considerations
+- **Monitoring & Observability**: Logging, metrics, error tracking
+
+### 4. Architectural Decision Discovery & Documentation
+- **Explicit Decisions**: Find existing documentation and decision records
+- **Implicit Decisions**: Identify significant undocumented architectural choices
+- **Technology Rationale**: Understand selection criteria and trade-offs
+- **Evolution Path**: How the architecture has changed over time
+
+${includeCompliance
+                ? `### 5. Compliance & Standards Assessment
+- **Industry Standards**: Adherence to relevant industry standards and best practices
+- **Security Compliance**: Security standards compliance (OWASP, SOC2, etc.)
+- **Code Standards**: Coding standards and style guide compliance
+- **Architectural Compliance**: Adherence to established architectural principles
+- **Regulatory Requirements**: Any regulatory compliance requirements (GDPR, HIPAA, etc.)`
+                : ''}
+
+## Expected Output: Outcome-Focused Architectural Context
+
+Provide a **comprehensive architectural context** with **clear project outcomes**:
+
+### 📋 **1. Executive Summary & Project Outcomes**
+- **Current State**: What the project is and what it does
+- **Architectural Maturity**: Assessment of current architectural practices
+- **Key Strengths**: What's working well architecturally
+- **Critical Gaps**: What needs immediate attention
+- **Success Metrics**: How to measure architectural improvements
+
+### 🔧 **2. Technology & Infrastructure Inventory**
+- **Technology Stack**: Complete inventory with versions and purposes
+- **Infrastructure Components**: Deployment, monitoring, data storage
+- **Dependencies**: Critical dependencies and potential risks
+- **Tool Chain**: Development, testing, and deployment tools
+
+### 🏗️ **3. Architectural Patterns & Design Decisions**
+- **System Design**: Overall architectural approach and patterns
+- **Component Architecture**: How major components interact
+- **Data Architecture**: How data flows and is managed
+- **Integration Patterns**: How external systems are integrated
+
+### 📊 **4. Quality & Compliance Assessment**
+- **Code Quality Score**: Assessment of current code quality
+- **Security Posture**: Security implementation and gaps
+- **Performance Profile**: Current performance characteristics
+- **Maintainability Index**: How easy the system is to maintain and evolve
+
+### 🎯 **5. Outcome-Focused Action Plan**
+Based on the analysis, provide a **clear workflow** with **projected outcomes**:
+
+#### **Immediate Actions (Next 1-2 weeks)**
+- **Priority 1**: Most critical architectural issues to address
+- **Quick Wins**: Low-effort, high-impact improvements
+- **Documentation**: Essential decisions that need immediate documentation
+
+#### **Short-term Goals (Next 1-3 months)**
+- **Architectural Improvements**: Planned enhancements with expected outcomes
+- **Technical Debt**: Priority technical debt to address
+- **Process Improvements**: Development workflow enhancements
+
+#### **Long-term Vision (3-12 months)**
+- **Strategic Architecture**: Long-term architectural evolution
+- **Scalability Roadmap**: How to scale the system effectively
+- **Innovation Opportunities**: Areas for architectural innovation
+
+### 📈 **6. Success Metrics & Outcomes**
+Define **measurable outcomes** for architectural improvements:
+
+- **Performance Metrics**: Response times, throughput, resource utilization
+- **Quality Metrics**: Code coverage, bug rates, maintainability scores
+- **Developer Experience**: Build times, deployment frequency, developer satisfaction
+- **Business Impact**: Feature delivery speed, system reliability, cost efficiency
+
+### 🏗️ **7. ADR Infrastructure & Documentation Plan**
+
+If ADR directory doesn't exist, also provide:
+
+1. **Create Directory Structure**:
+   \`\`\`
+   ${this.config.adrDirectory}/
+   ├── 0001-record-architecture-decisions.md (template)
+   ├── README.md (ADR process guide)
+   └── template.md (ADR template)
+   \`\`\`
+
+2. **Generate Initial ADRs** for discovered architectural decisions
+3. **Create ADR Process Guide** for the team
+4. **Establish ADR Workflow** for future decisions
+
+### 🔄 **8. Continuous Improvement Workflow**
+Establish ongoing architectural governance:
+
+- **Regular Reviews**: Monthly architectural health checks
+- **Decision Documentation**: Process for documenting new architectural decisions
+- **Compliance Monitoring**: Ongoing adherence to architectural standards
+- **Evolution Planning**: Quarterly architectural roadmap updates
+
+## Next Steps: Grounded Project Workflow
+
+After this analysis, follow this **outcome-focused workflow**:
+
+1. **📋 Review Analysis**: Examine the architectural context and recommendations
+2. **🎯 Set Priorities**: Choose 3-5 most impactful improvements based on outcomes
+3. **📝 Document Decisions**: Create ADRs for significant architectural choices
+4. **🔧 Implement Changes**: Execute improvements in priority order
+5. **📊 Measure Progress**: Track success metrics and outcomes
+6. **🔄 Iterate**: Regular reviews and continuous improvement
+
+This approach ensures that architectural work is **grounded in measurable outcomes** and **aligned with project success**.
+`;
+            // Execute the analysis with AI if enabled, otherwise return prompt
+            const { executeEcosystemAnalysisPrompt, formatMCPResponse } = await import('./utils/prompt-execution.js');
+            const executionResult = await executeEcosystemAnalysisPrompt(architecturalPrompt, projectAnalysisPrompt.instructions, {
+                temperature: 0.1,
+                maxTokens: 5000,
+                systemPrompt: `You are a senior software architect specializing in architectural context analysis.
+Analyze the provided project to understand its architectural patterns, design decisions, and structural organization.
+Focus on providing actionable insights about the architecture that can guide development decisions.`,
+            });
+            if (executionResult.isAIGenerated) {
+                // AI execution successful - return actual analysis results
+                return formatMCPResponse({
+                    ...executionResult,
+                    content: `# Architectural Context Analysis Results
+
+${filePath ? `## Target File: ${filePath}` : '## Project-wide Analysis'}
+
+## Project Information
+- **Project Path**: ${projectPath}
+- **Analysis Scope**: ${filePath ? 'File-specific' : 'Project-wide'}
+- **ADR Directory**: ${this.config.adrDirectory}
+
+## ADR Infrastructure Setup
+
+The analysis includes automatic ADR infrastructure setup:
+
+${adrDirectoryCheckPrompt.instructions}
+
+${adrDirectorySetupPrompt.instructions}
+
+## AI Analysis Results
+
+${executionResult.content}
+
+## Outcome-Focused Next Steps
+
+Based on the architectural analysis, follow this **grounded workflow**:
+
+### **Immediate Actions (This Week)**
+1. **Review Analysis**: Examine the architectural context and recommendations above
+2. **Set Up ADRs**: Ensure ADR directory structure is created and ready
+3. **Identify Quick Wins**: Focus on low-effort, high-impact improvements
+
+### **Short-term Goals (Next Month)**
+4. **Document Key Decisions**: Create ADRs for the most significant architectural choices
+5. **Address Critical Issues**: Tackle the highest-priority architectural concerns
+6. **Establish Metrics**: Set up measurement for the success metrics identified
+
+### **Long-term Vision (Next Quarter)**
+7. **Implement Roadmap**: Execute the architectural improvement plan
+8. **Monitor Progress**: Track success metrics and adjust approach as needed
+9. **Continuous Improvement**: Establish regular architectural reviews
+
+This **outcome-focused approach** ensures architectural work delivers **measurable value** and keeps the project **grounded in clear objectives**.
+`,
+                });
+            }
+            else {
+                // Fallback to prompt-only mode
+                return {
+                    content: [
+                        {
+                            type: 'text',
+                            text: architecturalPrompt,
+                        },
+                    ],
+                };
+            }
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to get architectural context: ${error instanceof Error ? error.message : String(error)}`, 'ANALYSIS_ERROR');
+        }
+    }
+    async generateAdrsFromPrd(args, context) {
+        const ctx = context || createNoOpContext();
+        const { prdPath, enhancedMode = getEnhancedModeDefault(), // Environment-aware default
+        promptOptimization = true, knowledgeEnhancement = getKnowledgeEnhancementDefault(), // Environment-aware default
+        prdType = 'general', } = args;
+        const outputDirectory = args['outputDirectory'] || this.config.adrDirectory;
+        this.logger.info(`Generating enhanced ADRs from PRD: ${prdPath} to ${outputDirectory}`);
+        this.logger.info(`Enhancement features - APE: ${promptOptimization}, Knowledge: ${knowledgeEnhancement}, Type: ${prdType}`);
+        ctx.info(`📝 Starting ADR generation from PRD: ${prdPath}`);
+        ctx.report_progress(0, 100);
+        try {
+            ctx.info('📂 Phase 1: Validating PRD file');
+            ctx.report_progress(10, 100);
+            const { readFileContentCompat: readFileContent, fileExistsCompat: fileExists } = await import('./utils/file-system.js');
+            // Import advanced prompting utilities if enhanced mode is enabled
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any
+            let generateArchitecturalKnowledge = null;
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any
+            let optimizePromptWithAPE = null;
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any
+            let createToolAPEConfig = null;
+            if (enhancedMode) {
+                if (knowledgeEnhancement) {
+                    const knowledgeModule = await import('./utils/knowledge-generation.js');
+                    generateArchitecturalKnowledge = knowledgeModule.generateArchitecturalKnowledge;
+                }
+                if (promptOptimization) {
+                    const apeModule = await import('./utils/automatic-prompt-engineering.js');
+                    optimizePromptWithAPE = apeModule.optimizePromptWithAPE;
+                    createToolAPEConfig = apeModule.createToolAPEConfig;
+                }
+            }
+            // Generate file existence check prompt
+            const fileExistsPrompt = await fileExists(prdPath);
+            // Generate file content reading prompt
+            const fileContentPrompt = await readFileContent(prdPath);
+            ctx.info('📚 Phase 2: Reading PRD content');
+            ctx.report_progress(25, 100);
+            // Step 1: Generate domain-specific knowledge if enabled
+            ctx.info('🧠 Phase 3: Generating domain knowledge');
+            ctx.report_progress(40, 100);
+            let knowledgeContext = '';
+            if (enhancedMode && knowledgeEnhancement && generateArchitecturalKnowledge) {
+                try {
+                    const knowledgeResult = await generateArchitecturalKnowledge({
+                        projectPath: outputDirectory,
+                        technologies: [],
+                        patterns: [],
+                        projectType: prdType,
+                        existingAdrs: [],
+                    }, {
+                        domains: this.getPrdTypeDomains(prdType),
+                        depth: 'intermediate',
+                        cacheEnabled: true,
+                    });
+                    knowledgeContext = `
+## Domain-Specific Knowledge Enhancement
+
+The following architectural knowledge has been generated to enhance PRD analysis and ADR creation:
+
+${knowledgeResult.prompt}
+
+---
+`;
+                }
+                catch (error) {
+                    this.logger.warn('Knowledge generation failed:', error);
+                    knowledgeContext = '<!-- Knowledge generation unavailable -->\n';
+                }
+            }
+            // Step 2: Create base ADR generation prompt
+            ctx.info('📋 Phase 4: Creating base ADR prompts');
+            ctx.report_progress(60, 100);
+            const baseAdrPrompt = this.createBaseAdrPrompt(prdPath, outputDirectory, knowledgeContext);
+            // Step 3: Apply APE optimization if enabled
+            ctx.info('⚡ Phase 5: Optimizing prompts with APE');
+            ctx.report_progress(75, 100);
+            let finalAdrPrompt = baseAdrPrompt;
+            if (enhancedMode && promptOptimization && optimizePromptWithAPE && createToolAPEConfig) {
+                try {
+                    const apeConfig = createToolAPEConfig('generate_adrs_from_prd', {
+                        candidateCount: 5,
+                        evaluationCriteria: ['task-completion', 'clarity', 'specificity'],
+                        optimizationRounds: 2,
+                        qualityThreshold: 0.75,
+                    });
+                    const apeResult = await optimizePromptWithAPE({
+                        prompt: baseAdrPrompt,
+                        instructions: 'Generate comprehensive ADRs from PRD analysis',
+                        context: {
+                            prdPath,
+                            outputDirectory,
+                            prdType,
+                            knowledgeEnhanced: knowledgeEnhancement,
+                        },
+                    }, apeConfig);
+                    finalAdrPrompt = apeResult.prompt;
+                }
+                catch (error) {
+                    this.logger.warn('APE optimization failed:', error);
+                    finalAdrPrompt = baseAdrPrompt;
+                }
+            }
+            // Generate comprehensive ADR creation prompt that includes file operations
+            const adrPrompt = `
+# Enhanced ADR Generation from PRD Request
+
+This is a comprehensive prompt-driven ADR generation process enhanced with advanced prompting techniques.
+
+## Enhancement Status
+- **APE Optimization**: ${enhancedMode && promptOptimization ? '✅ Enabled' : '❌ Disabled'}
+- **Knowledge Generation**: ${enhancedMode && knowledgeEnhancement ? '✅ Enabled' : '❌ Disabled'}
+- **PRD Type**: ${prdType}
+- **Enhanced Mode**: ${enhancedMode ? '✅ Enabled' : '❌ Disabled'}
+
+## Step 1: File Validation
+${fileExistsPrompt.prompt}
+
+**Instructions**: First, execute the file existence check above. If the file does not exist, stop the process and report the error. Only proceed to Step 2 if the file exists.
+
+## Step 2: PRD Content Reading
+${fileContentPrompt.prompt}
+
+**Instructions**: Execute the file reading operation above to obtain the PRD content. Use the content from this step for the enhanced ADR generation in Step 3.
+
+## Step 3: Enhanced ADR Generation
+
+${enhancedMode && promptOptimization
+                ? `
+### APE-Optimized Analysis
+This prompt has been optimized using Automatic Prompt Engineering for superior ADR generation quality.
+The optimization focused on task completion, clarity, and specificity for PRD analysis.
+
+`
+                : ''}
+
+${finalAdrPrompt}
+
+### File Creation Instructions
+
+For each generated ADR, create a file creation prompt using the following pattern:
+- **File Path**: ${outputDirectory}/[number]-[decision-title].md
+- **Content**: The complete enhanced ADR markdown content
+- **Action Confirmation**: Require user confirmation before creating files
+- **Security Validation**: Ensure output directory is safe and authorized
+
+### Enhanced Quality Assurance
+
+- Ensure each ADR leverages domain knowledge when available
+- Verify decisions align with PRD type best practices
+- Check that enhancement features are properly utilized
+- Validate that ADR content exceeds baseline quality expectations
+- Confirm all decisions are traceable back to PRD requirements with domain context
+`;
+            // Execute the ADR generation with AI if enabled, otherwise return prompt
+            ctx.info('🤖 Phase 6: Executing AI-powered ADR generation');
+            ctx.report_progress(90, 100);
+            const { executeADRGenerationPrompt, formatMCPResponse } = await import('./utils/prompt-execution.js');
+            const executionResult = await executeADRGenerationPrompt(adrPrompt, 'Generate comprehensive ADRs from PRD analysis with enhanced domain knowledge and optimization', {
+                temperature: 0.1,
+                maxTokens: 8000,
+                systemPrompt: `You are an expert software architect who creates comprehensive Architectural Decision Records (ADRs) from Product Requirements Documents (PRDs).
+Generate well-structured ADRs that follow best practices and include all necessary sections.
+Focus on extracting architectural decisions from the PRD and creating actionable ADRs with clear reasoning.`,
+            });
+            ctx.info('✅ ADR generation completed successfully');
+            ctx.report_progress(100, 100);
+            if (executionResult.isAIGenerated) {
+                // AI execution successful - return actual ADR generation results
+                return formatMCPResponse({
+                    ...executionResult,
+                    content: `# ADR Generation from PRD Results
+
+## Enhancement Features
+- **APE Optimization**: ${enhancedMode && promptOptimization ? '✅ Enabled' : '❌ Disabled'}
+- **Knowledge Generation**: ${enhancedMode && knowledgeEnhancement ? '✅ Enabled' : '❌ Disabled'}
+- **PRD Type Optimization**: ${prdType}
+- **Enhanced Mode**: ${enhancedMode ? '✅ Enabled' : '❌ Disabled'}
+
+## Source Information
+- **PRD Path**: ${prdPath}
+- **Output Directory**: ${outputDirectory}
+
+## Generated ADRs
+
+${executionResult.content}
+
+## Next Steps
+
+1. **Review Generated ADRs**: Examine each ADR for completeness and accuracy
+2. **Save ADR Files**: Create individual .md files for each ADR in ${outputDirectory}
+3. **Update ADR Index**: Add new ADRs to your project's ADR catalog
+4. **Stakeholder Review**: Share ADRs with team for feedback and approval
+5. **Implementation Planning**: Create tasks for implementing the architectural decisions
+
+## File Creation Commands
+
+To save the generated ADRs, create individual files in ${outputDirectory}:
+
+\`\`\`bash
+# Create ADR directory if it doesn't exist
+mkdir -p ${outputDirectory}
+
+# Save each ADR as a separate file (example)
+# Replace [NUMBER] and [TITLE] with actual values from generated ADRs
+# cat > "${outputDirectory}/001-example-decision.md" << 'EOF'
+# [ADR content here]
+# EOF
+\`\`\`
+`,
+                });
+            }
+            else {
+                // Fallback to prompt-only mode
+                return {
+                    content: [
+                        {
+                            type: 'text',
+                            text: `# Enhanced ADR Generation from PRD: ${prdPath}
+
+## Advanced Prompt-Driven ADR Generation Process
+
+This tool uses a 100% prompt-driven architecture enhanced with advanced prompting techniques:
+
+### Enhancement Features
+- **APE Optimization**: ${enhancedMode && promptOptimization ? '✅ Enabled - Prompts optimized for superior quality' : '❌ Disabled'}
+- **Knowledge Generation**: ${enhancedMode && knowledgeEnhancement ? '✅ Enabled - Domain knowledge enhanced analysis' : '❌ Disabled'}
+- **PRD Type Optimization**: ${prdType} - Tailored for specific domain requirements
+- **Enhanced Mode**: ${enhancedMode ? '✅ Enabled - All advanced features active' : '❌ Disabled - Basic mode'}
+
+### Enhanced AI Agent Workflow
+
+1. **Validate PRD file existence** using secure file system operations
+2. **Read PRD content** safely with proper security validation
+3. **Apply domain knowledge** to enhance understanding (if enabled)
+4. **Generate optimized ADRs** using APE-enhanced prompts (if enabled)
+5. **Create enhanced ADR files** in the specified output directory: ${outputDirectory}
+
+## Execution Instructions
+
+Please execute the following enhanced comprehensive prompt:
+
+${adrPrompt}
+
+## Advanced Features
+
+${enhancedMode && knowledgeEnhancement
+                                ? `
+### Knowledge Enhancement
+- Domain-specific architectural knowledge has been generated
+- PRD analysis is enhanced with ${prdType} domain expertise
+- ADR decisions leverage domain best practices and patterns
+`
+                                : ''}
+
+${enhancedMode && promptOptimization
+                                ? `
+### APE Optimization
+- Prompts have been automatically optimized for quality
+- Enhanced evaluation criteria ensure superior ADR generation
+- Optimization focused on task completion, clarity, and specificity
+`
+                                : ''}
+
+## Security and Validation
+
+- All file operations include security validation
+- Path traversal protection is enabled
+- System directory access is prevented
+- User confirmation is required for file creation
+- Content validation ensures safe enhanced ADR generation
+
+## Expected Enhanced Workflow
+
+1. Execute file existence check for: ${prdPath}
+2. If file exists, read PRD content securely
+3. Apply domain knowledge to enhance PRD understanding
+4. Analyze PRD content using optimized prompts
+5. Generate domain-enhanced individual ADRs for each decision
+6. Create file creation prompts for each enhanced ADR
+7. Confirm with user before writing files to: ${outputDirectory}
+
+The enhanced process maintains full traceability from PRD requirements to generated ADRs while providing superior quality through advanced prompting techniques and ensuring security and user control over file operations.`,
+                        },
+                    ],
+                };
+            }
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to generate ADR prompts from PRD: ${error instanceof Error ? error.message : String(error)}`, 'PROMPT_GENERATION_ERROR');
+        }
+    }
+    async compareAdrProgress(args) {
+        const { todoPath = 'TODO.md', adrDirectory = this.config.adrDirectory, projectPath = this.config.projectPath, environment = 'auto-detect', environmentConfig = {}, validationType = 'full', includeFileChecks = true, includeRuleValidation = true, deepCodeAnalysis = true, functionalValidation = true, strictMode = true, environmentValidation = true, } = args;
+        const { getAdrDirectoryPath } = await import('./utils/config.js');
+        const path = await import('path');
+        // Resolve paths
+        const absoluteTodoPath = path.resolve(projectPath, todoPath);
+        const absoluteAdrPath = adrDirectory
+            ? path.resolve(projectPath, adrDirectory)
+            : getAdrDirectoryPath(this.config);
+        this.logger.info(`Comparing ADR progress: TODO(${absoluteTodoPath}) vs ADRs(${absoluteAdrPath}) vs Environment(${projectPath}) [env: ${environment}]`);
+        // Environment validation and auto-detection
+        let detectedEnvironment = environment;
+        let finalEnvironmentConfig = { ...environmentConfig };
+        if (environmentValidation &&
+            (validationType === 'full' || validationType === 'environment-only')) {
+            try {
+                const envResult = await this.detectAndValidateEnvironment(projectPath, environment, environmentConfig);
+                detectedEnvironment = envResult.detectedEnvironment;
+                finalEnvironmentConfig = { ...finalEnvironmentConfig, ...envResult.environmentConfig };
+                this.logger.info(`Environment detection result: ${detectedEnvironment}`);
+            }
+            catch (error) {
+                this.logger.warn(`Environment detection failed: ${error instanceof Error ? error.message : String(error)}`);
+            }
+        }
+        try {
+            // Step 1: Read TODO.md file directly
+            let todoContent = '';
+            if (validationType === 'full' || validationType === 'todo-only') {
+                try {
+                    const fs = await import('fs/promises');
+                    todoContent = await fs.readFile(absoluteTodoPath, 'utf-8');
+                }
+                catch (error) {
+                    this.logger.warn(`Could not read TODO.md file: ${error instanceof Error ? error.message : String(error)}`);
+                }
+            }
+            // Step 2: Use actual project structure scanning
+            let projectStructure = null;
+            if (validationType === 'full' || validationType === 'environment-only') {
+                try {
+                    const { scanProjectStructure } = await import('./utils/actual-file-operations.js');
+                    const includeContent = deepCodeAnalysis || functionalValidation;
+                    projectStructure = await scanProjectStructure(projectPath, {
+                        readContent: includeContent,
+                        maxFileSize: includeContent ? 10000 : 0,
+                    });
+                }
+                catch (error) {
+                    this.logger.warn(`Could not scan project structure: ${error instanceof Error ? error.message : String(error)}`);
+                }
+            }
+            // Perform actual analysis locally instead of relying on AI execution
+            let discoveryResult = null;
+            if (validationType === 'full' || validationType === 'adr-only') {
+                const { discoverAdrsInDirectory } = await import('./utils/adr-discovery.js');
+                discoveryResult = await discoverAdrsInDirectory(absoluteAdrPath, projectPath, {
+                    includeContent: true,
+                    includeTimeline: false,
+                });
+            }
+            const analysis = await this.performLocalAdrProgressAnalysis({
+                todoContent,
+                todoPath: absoluteTodoPath,
+                discoveredAdrs: discoveryResult?.adrs || [],
+                adrDirectory: absoluteAdrPath,
+                projectStructure: projectStructure || null,
+                projectPath: projectPath,
+                validationType: validationType,
+                includeFileChecks: includeFileChecks,
+                includeRuleValidation: includeRuleValidation,
+                deepCodeAnalysis: deepCodeAnalysis,
+                functionalValidation: functionalValidation,
+                strictMode: strictMode,
+                environment: detectedEnvironment,
+                environmentConfig: finalEnvironmentConfig,
+                environmentValidation: environmentValidation,
+            });
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: analysis,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to compare ADR progress: ${error instanceof Error ? error.message : String(error)}`, 'VALIDATION_ERROR');
+        }
+    }
+    /**
+     * Detect and validate environment context
+     */
+    async detectAndValidateEnvironment(projectPath, environment, environmentConfig) {
+        const path = await import('path');
+        const fs = await import('fs/promises');
+        let detectedEnvironment = environment;
+        let finalConfig = { ...environmentConfig };
+        if (environment === 'auto-detect') {
+            // Auto-detect environment based on project structure
+            try {
+                // Check for environment indicator files
+                const envFiles = [
+                    '.env.development',
+                    '.env.staging',
+                    '.env.production',
+                    '.env.test',
+                    'package.json',
+                    'docker-compose.yml',
+                    'Dockerfile',
+                ];
+                const existingFiles = [];
+                for (const file of envFiles) {
+                    try {
+                        await fs.access(path.join(projectPath, file));
+                        existingFiles.push(file);
+                    }
+                    catch {
+                        // File doesn't exist, continue
+                    }
+                }
+                // Environment detection logic
+                if (existingFiles.includes('.env.production') || existingFiles.includes('Dockerfile')) {
+                    detectedEnvironment = 'production';
+                }
+                else if (existingFiles.includes('.env.staging')) {
+                    detectedEnvironment = 'staging';
+                }
+                else if (existingFiles.includes('.env.test')) {
+                    detectedEnvironment = 'testing';
+                }
+                else {
+                    detectedEnvironment = 'development';
+                }
+                // Set environment-specific default configurations
+                switch (detectedEnvironment) {
+                    case 'production':
+                        finalConfig = {
+                            securityLevel: 'critical',
+                            requiredFiles: ['package.json', 'README.md'],
+                            requiredServices: ['monitoring', 'logging'],
+                            performanceRequirements: { minUptime: 99.9 },
+                            ...finalConfig,
+                        };
+                        break;
+                    case 'staging':
+                        finalConfig = {
+                            securityLevel: 'high',
+                            requiredFiles: ['package.json'],
+                            requiredServices: ['testing', 'monitoring'],
+                            performanceRequirements: { minUptime: 95 },
+                            ...finalConfig,
+                        };
+                        break;
+                    case 'testing':
+                        finalConfig = {
+                            securityLevel: 'medium',
+                            requiredFiles: ['package.json'],
+                            requiredServices: ['testing'],
+                            performanceRequirements: {},
+                            ...finalConfig,
+                        };
+                        break;
+                    default: // development
+                        finalConfig = {
+                            securityLevel: 'medium',
+                            requiredFiles: ['package.json'],
+                            requiredServices: [],
+                            performanceRequirements: {},
+                            ...finalConfig,
+                        };
+                }
+            }
+            catch (error) {
+                this.logger.warn(`Environment auto-detection failed: ${error instanceof Error ? error.message : String(error)}`);
+                detectedEnvironment = 'development'; // fallback
+            }
+        }
+        return { detectedEnvironment, environmentConfig: finalConfig };
+    }
+    /**
+     * Perform local ADR progress analysis without relying on AI execution
+     */
+    async performLocalAdrProgressAnalysis(params) {
+        const { todoContent, todoPath, discoveredAdrs, adrDirectory, projectStructure, projectPath, validationType, includeFileChecks, includeRuleValidation, deepCodeAnalysis, functionalValidation, strictMode, environment, environmentConfig, environmentValidation, } = params;
+        const currentDate = new Date().toISOString().split('T')[0];
+        // Parse TODO content to extract tasks
+        const todoTasks = this.parseTodoTasks(todoContent);
+        // Basic analysis
+        const totalAdrs = discoveredAdrs.length;
+        const totalTasks = todoTasks.length;
+        const completedTasks = todoTasks.filter(task => task.completed).length;
+        // Calculate alignment score (simplified, now environment-aware)
+        const adrTaskMapping = this.mapTasksToAdrs(todoTasks, discoveredAdrs, environment, environmentConfig);
+        const alignedTasks = adrTaskMapping.aligned.length;
+        let alignmentScore = totalTasks > 0 ? Math.round((alignedTasks / totalTasks) * 100) : 0;
+        // Environment-aware scoring adjustments
+        if (environmentValidation && environmentConfig) {
+            const envScore = this.calculateEnvironmentScore(projectStructure, environment, environmentConfig);
+            alignmentScore = Math.round((alignmentScore + envScore) / 2); // Blend scores
+        }
+        // File existence checks
+        let fileCheckResults = '';
+        if (includeFileChecks && projectStructure) {
+            fileCheckResults = this.performFileExistenceChecks(todoTasks, projectStructure);
+        }
+        // Environment compliance checks
+        let environmentAnalysisResults = '';
+        if (environmentValidation && environmentConfig) {
+            environmentAnalysisResults = this.performEnvironmentComplianceAnalysis(projectStructure, environment, environmentConfig, strictMode);
+        }
+        // Mock vs Production analysis
+        let mockAnalysisResults = '';
+        if (deepCodeAnalysis && projectStructure) {
+            mockAnalysisResults = this.performMockVsProductionAnalysis(projectStructure, strictMode);
+        }
+        return `# ADR Progress Validation Report
+
+**Validation Date**: ${currentDate}
+**Validation Type**: ${validationType}
+**Project Path**: ${projectPath}
+**TODO Path**: ${todoPath}
+**ADR Directory**: ${adrDirectory}
+**Environment**: ${environment}${environmentValidation ? ` (validation enabled)` : ''}
+
+## Summary
+- **Total ADRs**: ${totalAdrs}
+- **Total TODO Tasks**: ${totalTasks}
+- **Completed Tasks**: ${completedTasks}
+- **Alignment Score**: ${alignmentScore}%
+- **Compliance Score**: ${Math.max(alignmentScore - 10, 0)}%
+- **Environment**: ${environment}
+
+## Configuration
+- **File Checks**: ${includeFileChecks ? 'Enabled' : 'Disabled'}
+- **Rule Validation**: ${includeRuleValidation ? 'Enabled' : 'Disabled'}
+- **Deep Code Analysis**: ${deepCodeAnalysis ? 'Enabled' : 'Disabled'}
+- **Functional Validation**: ${functionalValidation ? 'Enabled' : 'Disabled'}
+- **Strict Mode**: ${strictMode ? 'Enabled - High scrutiny for mock vs production' : 'Disabled'}
+- **Environment Validation**: ${environmentValidation ? 'Enabled' : 'Disabled'}
+
+## Environment Context
+- **Target Environment**: ${environment}
+- **Security Level**: ${environmentConfig?.['securityLevel'] || 'Not specified'}
+- **Required Files**: ${environmentConfig?.['requiredFiles']?.length || 0} files
+- **Required Services**: ${environmentConfig?.['requiredServices']?.length || 0} services
+
+## ADR Discovery Results
+${totalAdrs > 0
+            ? `Found ${totalAdrs} ADRs:\n${discoveredAdrs
+                .map((adr, i) => {
+                const adrRecord = adr;
+                return `${i + 1}. **${adrRecord['title']}** (${adrRecord['status']}) - ${adrRecord['filename']}`;
+            })
+                .join('\n')}`
+            : 'No ADRs found in the specified directory.'}
+
+## TODO Task Analysis
+${totalTasks > 0
+            ? `Found ${totalTasks} tasks:\n${todoTasks
+                .map((task, i) => `${i + 1}. ${task.completed ? '✅' : '⏳'} ${task.title}`)
+                .join('\n')}`
+            : 'No tasks found in TODO.md file.'}
+
+## Alignment Analysis
+
+### ✅ Properly Aligned Tasks
+${adrTaskMapping.aligned.length > 0
+            ? adrTaskMapping.aligned
+                .map(task => `- ${task.title}: Corresponds to ADR requirements`)
+                .join('\n')
+            : '- No aligned tasks identified'}
+
+### ⚠️ Misaligned Tasks
+${adrTaskMapping.misaligned.length > 0
+            ? adrTaskMapping.misaligned
+                .map(task => `- ${task.title}: May not fully align with ADR specifications`)
+                .join('\n')
+            : '- No misaligned tasks identified'}
+
+### ❌ Missing Tasks
+${adrTaskMapping.missing.length > 0
+            ? adrTaskMapping.missing.map(gap => `- ${gap}: Required by ADRs but not in TODO`).join('\n')
+            : '- No obvious missing tasks identified'}
+
+## Implementation Status
+
+${fileCheckResults || '### File Existence Validation\n- File checks disabled or no project structure available'}
+
+${environmentAnalysisResults || ''}
+
+${mockAnalysisResults || ''}
+
+## Recommendations
+
+### High Priority Actions
+${alignmentScore < 70
+            ? '1. **Improve ADR-TODO Alignment**: Review TODO tasks against ADR requirements\n2. **Add Missing Tasks**: Identify and add tasks required by ADRs'
+            : '1. **Maintain Current Alignment**: Continue following ADR specifications'}
+${completedTasks < totalTasks * 0.5
+            ? '\n3. **Accelerate Implementation**: Focus on completing pending tasks'
+            : ''}
+${environmentValidation && environment === 'production' && alignmentScore < 90
+            ? '\n4. **⚠️ Production Environment Warning**: Current alignment may not meet production requirements'
+            : ''}
+
+### Medium Priority Actions
+1. **Review Implementation Quality**: ${strictMode ? 'Strict mode analysis above shows' : 'Consider enabling strict mode for'} detailed quality assessment
+2. **Update Documentation**: Ensure TODO.md reflects current project state
+${environmentValidation
+            ? `3. **Environment Compliance**: Ensure ${environment} environment requirements are met`
+            : ''}
+
+### Low Priority Actions
+1. **Optimize Workflow**: Consider tools for automated ADR-TODO synchronization
+2. **Regular Validation**: Schedule periodic ADR progress reviews
+
+## Next Steps
+1. Address high-priority alignment issues identified above
+2. ${totalTasks === 0 ? 'Create initial TODO.md from ADR requirements' : 'Update TODO.md with missing tasks'}
+3. ${includeFileChecks ? 'Verify implementation of completed tasks' : 'Enable file checks for detailed implementation verification'}
+4. ${includeRuleValidation ? 'Resolve architectural rule compliance violations' : 'Enable rule validation for compliance checking'}
+\`\`\`
+
+To re-run this validation with strict mode:
+\`\`\`json
+{
+  "tool": "compare_adr_progress",
+  "args": {
+    "todoPath": "${todoPath}",
+    "adrDirectory": "${adrDirectory}",
+    "validationType": "full",
+    "deepCodeAnalysis": true,
+    "functionalValidation": true,
+    "strictMode": true
+  }
+}
+\`\`\`
+`;
+    }
+    /**
+     * Parse TODO.md content to extract tasks
+     */
+    parseTodoTasks(todoContent) {
+        if (!todoContent)
+            return [];
+        const lines = todoContent.split('\n');
+        const tasks = [];
+        for (const line of lines) {
+            let pos = 0;
+            while (pos < line.length && (line[pos] === ' ' || line[pos] === '\t'))
+                pos++;
+            if (pos >= line.length || (line[pos] !== '-' && line[pos] !== '*'))
+                continue;
+            pos++;
+            while (pos < line.length && (line[pos] === ' ' || line[pos] === '\t'))
+                pos++;
+            if (pos < line.length && line[pos] === '[') {
+                const checkbox = line[pos + 1];
+                if (checkbox &&
+                    (checkbox === 'x' || checkbox === 'X' || checkbox === ' ' || checkbox === '\t') &&
+                    line[pos + 2] === ']') {
+                    pos += 3;
+                    while (pos < line.length && (line[pos] === ' ' || line[pos] === '\t'))
+                        pos++;
+                    const title = line.slice(pos).trim();
+                    if (title.length > 0) {
+                        tasks.push({ title, completed: checkbox.toLowerCase() === 'x' });
+                    }
+                    continue;
+                }
+            }
+            const title = line.slice(pos).trim();
+            if (title.length > 3) {
+                tasks.push({ title, completed: false });
+            }
+        }
+        return tasks;
+    }
+    /**
+     * Map TODO tasks to ADRs to identify alignment (now environment-aware)
+     */
+    mapTasksToAdrs(tasks, adrs, environment, environmentConfig) {
+        const aligned = [];
+        const misaligned = [];
+        const missing = [];
+        // Simple keyword matching for alignment detection
+        const adrKeywords = adrs.flatMap(adr => {
+            const adrRecord = adr;
+            return [
+                String(adrRecord['title'] || '').toLowerCase(),
+                ...String(adrRecord['decision'] || '')
+                    .toLowerCase()
+                    .split(/\s+/)
+                    .filter((w) => w.length > 4),
+                ...String(adrRecord['context'] || '')
+                    .toLowerCase()
+                    .split(/\s+/)
+                    .filter((w) => w.length > 4),
+            ];
+        });
+        // Environment-specific keywords that should be prioritized
+        const envKeywords = [];
+        if (environment && environmentConfig) {
+            if (environment === 'production') {
+                envKeywords.push('deploy', 'production', 'monitoring', 'security', 'performance');
+            }
+            else if (environment === 'staging') {
+                envKeywords.push('test', 'staging', 'integration', 'validation');
+            }
+            else if (environment === 'development') {
+                envKeywords.push('setup', 'development', 'local', 'debug');
+            }
+        }
+        for (const task of tasks) {
+            const taskLower = task.title.toLowerCase();
+            const firstWord = taskLower.split(' ')[0] || '';
+            const hasKeywordMatch = adrKeywords.some(keyword => taskLower.includes(keyword) || keyword.includes(firstWord));
+            // Environment-aware alignment scoring
+            const hasEnvKeywordMatch = envKeywords.some(keyword => taskLower.includes(keyword));
+            if (hasKeywordMatch || hasEnvKeywordMatch) {
+                aligned.push(task);
+            }
+            else {
+                misaligned.push(task);
+            }
+        }
+        // Identify potential missing tasks based on ADR content
+        for (const adr of adrs) {
+            const adrRecord = adr;
+            if (adrRecord['status'] === 'accepted' && adrRecord['decision']) {
+                const decisionWords = String(adrRecord['decision']).toLowerCase().split(/\s+/);
+                const implementationWords = [
+                    'implement',
+                    'create',
+                    'build',
+                    'develop',
+                    'add',
+                    'setup',
+                    'configure',
+                ];
+                if (implementationWords.some(word => decisionWords.includes(word))) {
+                    const adrTitle = String(adrRecord['title'] || '');
+                    const adrFirstWord = adrTitle.toLowerCase().split(' ')[0] || '';
+                    const hasCorrespondingTask = tasks.some(task => task.title.toLowerCase().includes(adrFirstWord));
+                    if (!hasCorrespondingTask) {
+                        missing.push(`Implement ${adrTitle}`);
+                    }
+                }
+            }
+        }
+        // Environment-specific missing tasks
+        if (environment && environmentConfig) {
+            const envConfig = environmentConfig;
+            if (envConfig['requiredFiles']) {
+                for (const file of envConfig['requiredFiles']) {
+                    const hasFileTask = tasks.some(task => task.title.toLowerCase().includes(file.toLowerCase()));
+                    if (!hasFileTask) {
+                        missing.push(`Create ${file} for ${environment} environment`);
+                    }
+                }
+            }
+            if (envConfig['requiredServices']) {
+                for (const service of envConfig['requiredServices']) {
+                    const hasServiceTask = tasks.some(task => task.title.toLowerCase().includes(service.toLowerCase()));
+                    if (!hasServiceTask) {
+                        missing.push(`Setup ${service} service for ${environment}`);
+                    }
+                }
+            }
+        }
+        return { aligned, misaligned, missing };
+    }
+    /**
+     * Check file existence for completed tasks
+     */
+    performFileExistenceChecks(tasks, projectStructure) {
+        if (!projectStructure)
+            return '- Project structure not available';
+        const allFiles = [
+            ...(projectStructure.packageFiles || []),
+            ...(projectStructure.configFiles || []),
+            ...(projectStructure.buildFiles || []),
+            ...(projectStructure.dockerFiles || []),
+            ...(projectStructure.ciFiles || []),
+            ...(projectStructure.scriptFiles || []),
+        ];
+        let results = '### File Existence Validation\n';
+        let checkCount = 0;
+        for (const task of tasks) {
+            if (task.completed) {
+                // Simple heuristic: look for files mentioned in task title
+                const taskLower = task.title.toLowerCase();
+                const mentionedFiles = allFiles.filter(file => taskLower.includes(file.filename.toLowerCase()) ||
+                    taskLower.includes(file.filename.replace(/\.[^.]+$/, '').toLowerCase()));
+                if (mentionedFiles.length > 0) {
+                    results += `- ✅ **${task.title}**: Found related files (${mentionedFiles.map(f => f.filename).join(', ')})\n`;
+                    checkCount++;
+                }
+                else if (taskLower.includes('file') ||
+                    taskLower.includes('create') ||
+                    taskLower.includes('implement')) {
+                    results += `- ⚠️ **${task.title}**: No clearly related files found\n`;
+                    checkCount++;
+                }
+            }
+        }
+        if (checkCount === 0) {
+            results += '- No file-related completed tasks to validate\n';
+        }
+        return results;
+    }
+    /**
+     * Analyze code for mock vs production implementation
+     */
+    performMockVsProductionAnalysis(projectStructure, strictMode) {
+        if (!projectStructure)
+            return '';
+        const codeFiles = [
+            ...(projectStructure.buildFiles || []),
+            ...(projectStructure.configFiles || []),
+        ].filter(file => file.content && file.content !== '[Binary or unreadable file]');
+        if (codeFiles.length === 0)
+            return '';
+        let results = '\n### Mock vs Production Code Analysis\n';
+        let mockIndicators = 0;
+        let productionIndicators = 0;
+        const mockPatterns = [
+            /TODO:/gi,
+            /FIXME:/gi,
+            /NotImplementedException/gi,
+            /throw.*not.*implement/gi,
+            /return.*mock/gi,
+            /placeholder/gi,
+            /stub/gi,
+            /return\s+null;/gi,
+            /return\s+""/gi,
+            /return\s+\[\]/gi,
+            /return\s+{}/gi,
+        ];
+        const productionPatterns = [
+            /error\s+handling/gi,
+            /try\s*{/gi,
+            /catch\s*\(/gi,
+            /validate/gi,
+            /authentication/gi,
+            /authorization/gi,
+            /database/gi,
+            /api/gi,
+            /config/gi,
+        ];
+        for (const file of codeFiles.slice(0, 10)) {
+            // Limit analysis to prevent overwhelming output
+            const content = file.content;
+            const fileMockCount = mockPatterns.reduce((count, pattern) => count + (content.match(pattern) || []).length, 0);
+            const fileProdCount = productionPatterns.reduce((count, pattern) => count + (content.match(pattern) || []).length, 0);
+            mockIndicators += fileMockCount;
+            productionIndicators += fileProdCount;
+            if (fileMockCount > 0 || fileProdCount > 2) {
+                const status = fileMockCount > fileProdCount
+                    ? '❌ **Mock/Stub**'
+                    : fileProdCount > fileMockCount * 2
+                        ? '✅ **Production Ready**'
+                        : '⚠️ **Partial Implementation**';
+                results += `- ${status}: ${file.filename} `;
+                if (fileMockCount > 0) {
+                    results += `(${fileMockCount} mock indicators) `;
+                }
+                if (fileProdCount > 0) {
+                    results += `(${fileProdCount} production indicators)`;
+                }
+                results += '\n';
+            }
+        }
+        results += `\n#### Overall Code Quality Assessment\n`;
+        results += `- **Mock Indicators Found**: ${mockIndicators} instances\n`;
+        results += `- **Production Indicators Found**: ${productionIndicators} instances\n`;
+        if (strictMode) {
+            const qualityScore = productionIndicators > mockIndicators * 2
+                ? 'Good'
+                : productionIndicators > mockIndicators
+                    ? 'Fair'
+                    : 'Needs Improvement';
+            results += `- **Quality Assessment**: ${qualityScore}\n`;
+            if (mockIndicators > 0) {
+                results += `- **⚠️ Strict Mode Warning**: Found ${mockIndicators} potential mock/stub indicators\n`;
+            }
+        }
+        return results;
+    }
+    /**
+     * Calculate environment-specific compliance score
+     */
+    calculateEnvironmentScore(projectStructure, environment, environmentConfig) {
+        if (!projectStructure || !environmentConfig)
+            return 0;
+        let score = 100; // Start with perfect score
+        // Check required files
+        if (environmentConfig.requiredFiles) {
+            const allFiles = [
+                ...(projectStructure.packageFiles || []),
+                ...(projectStructure.configFiles || []),
+                ...(projectStructure.buildFiles || []),
+                ...(projectStructure.dockerFiles || []),
+                ...(projectStructure.ciFiles || []),
+                ...(projectStructure.scriptFiles || []),
+            ];
+            const existingFiles = allFiles.map(f => f.filename);
+            const missingFiles = environmentConfig.requiredFiles.filter((file) => !existingFiles.includes(file));
+            // Deduct 10 points per missing required file
+            score -= missingFiles.length * 10;
+        }
+        // Environment-specific penalties
+        if (environment === 'production') {
+            // Production requires higher standards
+            if (!projectStructure.dockerFiles?.length)
+                score -= 15;
+            if (!projectStructure.ciFiles?.length)
+                score -= 10;
+        }
+        return Math.max(score, 0);
+    }
+    /**
+     * Perform environment compliance analysis
+     */
+    performEnvironmentComplianceAnalysis(projectStructure, environment, environmentConfig, strictMode) {
+        if (!projectStructure || !environmentConfig) {
+            return '\n### Environment Compliance Analysis\n- Environment analysis disabled or no project structure available\n';
+        }
+        let results = '\n### Environment Compliance Analysis\n';
+        // Required files analysis
+        if (environmentConfig.requiredFiles) {
+            results += `#### Required Files for ${environment} Environment\n`;
+            const allFiles = [
+                ...(projectStructure.packageFiles || []),
+                ...(projectStructure.configFiles || []),
+                ...(projectStructure.buildFiles || []),
+                ...(projectStructure.dockerFiles || []),
+                ...(projectStructure.ciFiles || []),
+                ...(projectStructure.scriptFiles || []),
+            ];
+            const existingFiles = allFiles.map(f => f.filename);
+            for (const requiredFile of environmentConfig.requiredFiles) {
+                const exists = existingFiles.includes(requiredFile);
+                results += `- ${exists ? '✅' : '❌'} **${requiredFile}**: ${exists ? 'Found' : 'Missing'}\n`;
+            }
+        }
+        // Security level compliance
+        if (environmentConfig.securityLevel) {
+            results += `\n#### Security Level: ${environmentConfig.securityLevel}\n`;
+            const securityIndicators = this.analyzeSecurityCompliance(projectStructure, environmentConfig.securityLevel);
+            results += securityIndicators;
+        }
+        // Environment-specific recommendations
+        results += `\n#### ${environment} Environment Recommendations\n`;
+        switch (environment) {
+            case 'production':
+                results +=
+                    '- ⚠️ **Production Critical**: Ensure monitoring, logging, and backup strategies are implemented\n';
+                results += '- 🔒 **Security**: Implement comprehensive security measures\n';
+                results += '- 📊 **Performance**: Monitor and optimize for production workloads\n';
+                if (strictMode) {
+                    results +=
+                        '- 🔍 **Strict Mode**: Enhanced validation enabled for production environment\n';
+                }
+                break;
+            case 'staging':
+                results += '- 🧪 **Testing**: Ensure comprehensive test coverage and validation\n';
+                results += '- 📋 **Validation**: Implement environment parity checks\n';
+                break;
+            case 'development':
+                results += '- 🛠️ **Development**: Focus on developer experience and debugging tools\n';
+                results += '- 🔄 **Iteration**: Ensure fast feedback loops\n';
+                break;
+        }
+        return results;
+    }
+    /**
+     * Analyze security compliance based on security level
+     */
+    analyzeSecurityCompliance(projectStructure, securityLevel) {
+        let results = '';
+        const securityFiles = [
+            ...(projectStructure.configFiles || []),
+            ...(projectStructure.dockerFiles || []),
+        ].filter(file => file.filename.includes('security') ||
+            file.filename.includes('auth') ||
+            file.filename.includes('.env') ||
+            file.filename === 'Dockerfile');
+        const hasSecurityConfig = securityFiles.length > 0;
+        switch (securityLevel) {
+            case 'critical':
+                results += `- ${hasSecurityConfig ? '✅' : '❌'} **Critical Security**: ${hasSecurityConfig ? 'Security configuration found' : 'No security configuration detected'}\n`;
+                if (!hasSecurityConfig) {
+                    results += '  - **Action Required**: Implement comprehensive security measures\n';
+                }
+                break;
+            case 'high':
+                results += `- ${hasSecurityConfig ? '✅' : '⚠️'} **High Security**: ${hasSecurityConfig ? 'Some security configuration found' : 'Limited security configuration'}\n`;
+                break;
+            case 'medium':
+                results += `- ℹ️ **Medium Security**: Basic security measures recommended\n`;
+                break;
+            default:
+                results += `- ℹ️ **Security Level**: ${securityLevel} (consider increasing for production)\n`;
+        }
+        return results;
+    }
+    /**
+     * Content masking tool implementations
+     */
+    async analyzeContentSecurity(args) {
+        const { analyzeContentSecurity } = await import('./tools/content-masking-tool.js');
+        return await analyzeContentSecurity(args);
+    }
+    async generateContentMasking(args) {
+        const { generateContentMasking } = await import('./tools/content-masking-tool.js');
+        return await generateContentMasking(args);
+    }
+    async configureCustomPatterns(args) {
+        const { configureCustomPatterns } = await import('./tools/content-masking-tool.js');
+        return await configureCustomPatterns(args);
+    }
+    async applyBasicContentMasking(args) {
+        const { applyBasicContentMasking } = await import('./tools/content-masking-tool.js');
+        return await applyBasicContentMasking(args);
+    }
+    async validateContentMasking(args) {
+        const { validateContentMasking } = await import('./tools/content-masking-tool.js');
+        return await validateContentMasking(args);
+    }
+    async manageCache(args) {
+        const { action, key } = args;
+        try {
+            const { clearCache, getCacheStats, cleanupCache, invalidateCache } = await import('./utils/cache.js');
+            switch (action) {
+                case 'clear': {
+                    const clearPrompt = await clearCache();
+                    return {
+                        content: [
+                            {
+                                type: 'text',
+                                text: `# Cache Clear Operation
+
+## AI Delegation Required
+
+Please execute the following cache clearing operation:
+
+${clearPrompt.prompt}
+
+## Implementation Instructions
+
+${clearPrompt.instructions}
+
+## Expected Result
+
+After successful execution, all cache entries will be removed while preserving the cache directory structure and metadata.json file.`,
+                            },
+                        ],
+                    };
+                }
+                case 'stats': {
+                    const statsPrompt = await getCacheStats();
+                    return {
+                        content: [
+                            {
+                                type: 'text',
+                                text: `# Cache Statistics Collection
+
+## AI Delegation Required
+
+Please execute the following cache statistics collection operation:
+
+${statsPrompt.prompt}
+
+## Implementation Instructions
+
+${statsPrompt.instructions}
+
+## Expected Information
+
+The AI agent will provide:
+- **Total Entries**: Number of cache files
+- **Total Size**: Combined size of all cache files
+- **Oldest Entry**: Cache key of the oldest entry
+- **Newest Entry**: Cache key of the newest entry
+
+## Cache Directory
+\`.mcp-adr-cache/\`
+
+## Cache Types
+- **Knowledge Graph**: Architectural analysis results (TTL: 1 hour)
+- **Analysis Report**: Project analysis reports (TTL: 30 minutes)
+- **ADR List**: ADR inventory and metadata (TTL: 15 minutes)
+
+## Management
+Use \`manage_cache\` tool with different actions:
+- \`clear\`: Remove all cache entries
+- \`cleanup\`: Remove expired entries only
+- \`invalidate\`: Remove specific cache entry`,
+                            },
+                        ],
+                    };
+                }
+                case 'cleanup': {
+                    const cleanupPrompt = await cleanupCache();
+                    return {
+                        content: [
+                            {
+                                type: 'text',
+                                text: `# Cache Cleanup Operation
+
+## AI Delegation Required
+
+Please execute the following cache cleanup operation:
+
+${cleanupPrompt.prompt}
+
+## Implementation Instructions
+
+${cleanupPrompt.instructions}
+
+## Expected Result
+
+The AI agent will remove expired cache entries and provide a count of cleaned files.`,
+                            },
+                        ],
+                    };
+                }
+                case 'invalidate': {
+                    if (!key) {
+                        throw new McpAdrError('Cache key is required for invalidate action', 'INVALID_INPUT');
+                    }
+                    const invalidatePrompt = await invalidateCache(key);
+                    return {
+                        content: [
+                            {
+                                type: 'text',
+                                text: `# Cache Invalidation Operation
+
+## AI Delegation Required
+
+Please execute the following cache invalidation operation:
+
+${invalidatePrompt.prompt}
+
+## Implementation Instructions
+
+${invalidatePrompt.instructions}
+
+## Target Cache Entry
+
+**Cache Key**: ${key}
+
+The AI agent will safely remove the specified cache entry.`,
+                            },
+                        ],
+                    };
+                }
+                default:
+                    throw new McpAdrError(`Unknown cache action: ${action}`, 'INVALID_INPUT');
+            }
+        }
+        catch (error) {
+            throw new McpAdrError(`Cache management failed: ${error instanceof Error ? error.message : String(error)}`, 'CACHE_ERROR');
+        }
+    }
+    async configureOutputMasking(args) {
+        const { action = 'get', enabled, strategy, customPatterns } = args;
+        try {
+            const { validateMaskingConfig } = await import('./utils/output-masking.js');
+            switch (action) {
+                case 'get': {
+                    return {
+                        content: [
+                            {
+                                type: 'text',
+                                text: `# Current Output Masking Configuration
+
+## Settings
+- **Enabled**: ${this.maskingConfig.enabled}
+- **Strategy**: ${this.maskingConfig.strategy}
+- **Custom Patterns**: ${this.maskingConfig.customPatterns?.length || 0} patterns
+- **Skip Patterns**: ${this.maskingConfig.skipPatterns?.length || 0} patterns
+
+## Available Strategies
+- **full**: Replace entire sensitive content with [REDACTED]
+- **partial**: Show safe prefix/suffix, mask middle (e.g., sk-...****)
+- **placeholder**: Replace with descriptive placeholders (e.g., <YOUR_API_KEY>)
+- **environment**: Replace with environment variable references (e.g., \${API_KEY})
+
+## Configuration
+Use \`configure_output_masking\` tool with:
+- \`action: "set"\` to update configuration
+- \`action: "reset"\` to restore defaults
+
+## Current Status
+${this.maskingConfig.enabled ? '✅ Output masking is ACTIVE' : '⚠️ Output masking is DISABLED'}
+`,
+                            },
+                        ],
+                    };
+                }
+                case 'set': {
+                    const newConfig = { ...this.maskingConfig };
+                    if (typeof enabled === 'boolean') {
+                        newConfig.enabled = enabled;
+                    }
+                    if (strategy &&
+                        ['full', 'partial', 'placeholder', 'environment'].includes(strategy)) {
+                        newConfig.strategy = strategy;
+                    }
+                    if (Array.isArray(customPatterns)) {
+                        newConfig.customPatterns = customPatterns;
+                    }
+                    const validation = validateMaskingConfig(newConfig);
+                    if (!validation.isValid) {
+                        throw new McpAdrError(`Invalid masking configuration: ${validation.errors.join(', ')}`, 'INVALID_CONFIG');
+                    }
+                    this.maskingConfig = newConfig;
+                    return {
+                        content: [
+                            {
+                                type: 'text',
+                                text: `✅ Output masking configuration updated successfully!
+
+## New Settings
+- **Enabled**: ${newConfig.enabled}
+- **Strategy**: ${newConfig.strategy}
+- **Custom Patterns**: ${newConfig.customPatterns?.length || 0} patterns
+
+${newConfig.enabled
+                                    ? '🔒 All MCP tool and resource outputs will now be masked according to the new configuration.'
+                                    : '⚠️ Output masking is disabled. Sensitive information may be exposed in responses.'}
+`,
+                            },
+                        ],
+                    };
+                }
+                case 'reset': {
+                    const { createMaskingConfig } = await import('./utils/output-masking.js');
+                    this.maskingConfig = createMaskingConfig();
+                    return {
+                        content: [
+                            {
+                                type: 'text',
+                                text: `✅ Output masking configuration reset to defaults!
+
+## Default Settings
+- **Enabled**: ${this.maskingConfig.enabled}
+- **Strategy**: ${this.maskingConfig.strategy}
+- **Custom Patterns**: ${this.maskingConfig.customPatterns?.length || 0} patterns
+- **Skip Patterns**: ${this.maskingConfig.skipPatterns?.length || 0} patterns
+
+🔒 Default masking is now active for all outputs.
+`,
+                            },
+                        ],
+                    };
+                }
+                default:
+                    throw new McpAdrError(`Unknown masking action: ${action}`, 'INVALID_INPUT');
+            }
+        }
+        catch (error) {
+            throw new McpAdrError(`Output masking configuration failed: ${error instanceof Error ? error.message : String(error)}`, 'CONFIG_ERROR');
+        }
+    }
+    /**
+     * Helper method to get domains based on PRD type
+     */
+    getPrdTypeDomains(prdType) {
+        const domainMap = {
+            'web-application': ['api-design', 'frontend-architecture', 'database-design', 'security'],
+            'mobile-app': ['mobile-architecture', 'api-design', 'performance-optimization', 'security'],
+            microservices: ['microservices', 'api-design', 'distributed-systems', 'database-design'],
+            'data-platform': [
+                'database-design',
+                'data-architecture',
+                'performance-optimization',
+                'scalability',
+            ],
+            'api-service': ['api-design', 'microservices', 'security', 'performance-optimization'],
+            general: ['api-design', 'database-design', 'security'],
+        };
+        return (domainMap[prdType] || domainMap['general'] || ['api-design', 'database-design', 'security']);
+    }
+    /**
+     * Helper method to get domains for ecosystem analysis based on technology focus
+     */
+    getEcosystemAnalysisDomains(technologyFocus) {
+        // Base domains for ecosystem analysis
+        const baseDomains = ['api-design', 'database-design', 'security', 'performance-optimization'];
+        // Technology-specific domain mapping
+        const technologyDomainMap = {
+            react: ['frontend-architecture', 'web-applications'],
+            vue: ['frontend-architecture', 'web-applications'],
+            angular: ['frontend-architecture', 'web-applications'],
+            node: ['api-design', 'microservices'],
+            express: ['api-design', 'web-applications'],
+            fastify: ['api-design', 'performance-optimization'],
+            nestjs: ['api-design', 'microservices'],
+            spring: ['api-design', 'microservices'],
+            django: ['api-design', 'web-applications'],
+            flask: ['api-design', 'web-applications'],
+            rails: ['api-design', 'web-applications'],
+            laravel: ['api-design', 'web-applications'],
+            docker: ['containerization', 'microservices'],
+            kubernetes: ['containerization', 'distributed-systems'],
+            mongodb: ['database-design', 'data-architecture'],
+            postgresql: ['database-design', 'data-architecture'],
+            mysql: ['database-design', 'data-architecture'],
+            redis: ['database-design', 'performance-optimization'],
+            elasticsearch: ['database-design', 'data-architecture'],
+            kafka: ['distributed-systems', 'data-architecture'],
+            rabbitmq: ['distributed-systems', 'microservices'],
+            aws: ['cloud-architecture', 'scalability'],
+            azure: ['cloud-architecture', 'scalability'],
+            gcp: ['cloud-architecture', 'scalability'],
+            terraform: ['infrastructure-as-code', 'cloud-architecture'],
+            ansible: ['infrastructure-as-code', 'automation'],
+            jenkins: ['ci-cd', 'automation'],
+            'github-actions': ['ci-cd', 'automation'],
+            'gitlab-ci': ['ci-cd', 'automation'],
+        };
+        // Collect domains based on technology focus
+        const technologyDomains = new Set();
+        for (const tech of technologyFocus) {
+            const techLower = tech.toLowerCase();
+            const domains = technologyDomainMap[techLower];
+            if (domains) {
+                domains.forEach(domain => technologyDomains.add(domain));
+            }
+        }
+        // Combine base domains with technology-specific domains
+        const allDomains = [...baseDomains, ...Array.from(technologyDomains)];
+        // Remove duplicates and limit to reasonable number
+        const uniqueDomains = [...new Set(allDomains)];
+        // Return up to 6 most relevant domains
+        return uniqueDomains.slice(0, 6);
+    }
+    /**
+     * Helper method to create base ADR generation prompt
+     */
+    createBaseAdrPrompt(prdPath, outputDirectory, knowledgeContext) {
+        return `
+# Enhanced ADR Generation from PRD Request
+
+This is a comprehensive prompt-driven ADR generation process enhanced with domain knowledge and optimized prompting.
+
+${knowledgeContext}
+
+## Step 1: File Validation
+Please verify that the PRD file exists at: ${prdPath}
+
+## Step 2: PRD Content Reading
+Read and analyze the PRD content from: ${prdPath}
+
+## Step 3: Enhanced ADR Generation and Creation
+
+Once you have successfully read the PRD content, analyze it using the domain knowledge above and generate Architectural Decision Records (ADRs).
+
+### Enhanced Analysis Requirements
+
+1. **Extract Key Decisions**: Identify all architectural decisions implied or stated in the PRD
+2. **Apply Domain Knowledge**: Use the generated domain knowledge to enhance decision analysis
+3. **Decision Categorization**: Group decisions by:
+   - Technology stack choices (informed by domain best practices)
+   - Architectural patterns (leveraging domain-specific patterns)
+   - Infrastructure decisions (considering domain requirements)
+   - Security considerations (applying domain security knowledge)
+   - Performance requirements (using domain performance insights)
+   - Integration approaches (following domain integration patterns)
+
+### Enhanced ADR Generation Requirements
+
+1. **Follow ADR Format**: Use standard ADR template with domain-enhanced content
+2. **Number Sequentially**: Use format 001-decision-title.md, 002-next-decision.md, etc.
+3. **Output Directory**: Place ADRs in ${outputDirectory}/
+4. **Domain Context**: Include relevant domain knowledge in each ADR
+5. **File Creation**: Generate file creation prompts for each ADR
+
+### Enhanced ADR Template Format
+
+\`\`\`markdown
+# [Number]. [Title]
+
+**Status**: [Proposed/Accepted/Deprecated/Superseded]
+**Date**: [YYYY-MM-DD]
+**Domain**: [Relevant domain from knowledge enhancement]
+
+## Context
+[Describe the context and problem statement from PRD, enhanced with domain knowledge]
+
+## Decision
+[Describe the architectural decision, informed by domain best practices]
+
+## Consequences
+[Describe positive and negative consequences, considering domain-specific implications]
+
+## Domain Considerations
+[Specific considerations from the domain knowledge that influenced this decision]
+
+## Implementation Plan
+[Steps to implement this decision, leveraging domain expertise]
+
+## Related PRD Sections
+[Reference specific sections from the PRD that led to this decision]
+
+## Domain References
+[References to domain knowledge that informed this decision]
+\`\`\`
+
+### Expected Enhanced Output
+
+Please provide:
+1. **File Validation Results**: Confirmation that PRD file exists and is readable
+2. **PRD Content Summary**: Brief summary enhanced with domain context
+3. **Domain Analysis**: How domain knowledge applies to this PRD
+4. **Identified Decisions**: List of all architectural decisions with domain context
+5. **Generated ADRs**: Complete enhanced ADR content for each decision
+6. **File Creation Plan**: File names, directory structure, and creation order
+7. **Implementation Priority**: Recommended order considering domain best practices
+
+### Quality Assurance with Domain Enhancement
+
+- Ensure each ADR leverages relevant domain knowledge
+- Verify decisions align with domain best practices
+- Check that domain considerations are properly documented
+- Validate that ADR content is enhanced beyond basic analysis
+`;
+    }
+    /**
+     * ADR suggestion tool implementations
+     */
+    async suggestAdrs(args) {
+        const { suggestAdrs } = await import('./tools/adr-suggestion-tool.js');
+        return await suggestAdrs(args);
+    }
+    async generateAdrFromDecision(args) {
+        const { generateAdrFromDecision } = await import('./tools/adr-suggestion-tool.js');
+        return await generateAdrFromDecision(args);
+    }
+    async generateAdrBootstrap(args) {
+        const { default: generateAdrBootstrapScripts } = await import('./tools/adr-bootstrap-validation-tool.js');
+        return await generateAdrBootstrapScripts(args);
+    }
+    async bootstrapValidationLoop(args) {
+        const { default: bootstrapValidationLoop } = await import('./tools/bootstrap-validation-loop-tool.js');
+        return await bootstrapValidationLoop(args);
+    }
+    async discoverExistingAdrs(args, context) {
+        const ctx = context || createNoOpContext();
+        try {
+            ctx.info('🔍 Starting ADR discovery process...');
+            ctx.report_progress(0, 100);
+            ctx.info('📂 Phase 1: Scanning ADR directory');
+            ctx.report_progress(30, 100);
+            const { discoverExistingAdrs } = await import('./tools/adr-suggestion-tool.js');
+            ctx.info('📄 Phase 2: Analyzing ADR files');
+            ctx.report_progress(60, 100);
+            const result = await discoverExistingAdrs(args);
+            ctx.info('✅ ADR discovery completed successfully');
+            ctx.report_progress(100, 100);
+            return result;
+        }
+        catch (error) {
+            ctx.error?.(`❌ ADR discovery failed: ${error instanceof Error ? error.message : String(error)}`);
+            throw error;
+        }
+    }
+    async analyzeAdrTimeline(args) {
+        try {
+            const projectPath = args['projectPath'] || this.config.projectPath;
+            const adrDirectory = args['adrDirectory'] || 'docs/adrs';
+            const generateActions = args['generateActions'] ?? true;
+            const thresholdProfile = args['thresholdProfile'];
+            const autoDetectContext = args['autoDetectContext'] ?? true;
+            const includeContent = args['includeContent'] ?? true;
+            const forceExtract = args['forceExtract'] ?? false;
+            const { discoverAdrsInDirectory } = await import('./utils/adr-discovery.js');
+            const { formatActionReport } = await import('./utils/adr-action-analyzer.js');
+            // Discover ADRs with timeline analysis
+            const result = await discoverAdrsInDirectory(adrDirectory, projectPath, {
+                includeContent,
+                includeTimeline: true,
+                timelineOptions: {
+                    forceExtract,
+                    useCache: true,
+                    cacheTTL: 3600,
+                },
+                generateActions,
+                ...(thresholdProfile ? { thresholdProfile } : {}),
+                autoDetectContext,
+            });
+            // Format response
+            let responseText = `# ADR Timeline Analysis\n\n`;
+            responseText += `**Project:** ${projectPath}\n`;
+            responseText += `**ADR Directory:** ${adrDirectory}\n`;
+            responseText += `**Total ADRs:** ${result.totalAdrs}\n\n`;
+            // Add timeline summary
+            if (result.adrs.some(adr => adr.timeline)) {
+                const withTimeline = result.adrs.filter(adr => adr.timeline).length;
+                responseText += `## Timeline Data\n\n`;
+                responseText += `- **ADRs with Timeline:** ${withTimeline}/${result.totalAdrs}\n`;
+                const ages = result.adrs.filter(adr => adr.timeline).map(adr => adr.timeline.age_days);
+                if (ages.length > 0) {
+                    const avgAge = Math.floor(ages.reduce((a, b) => a + b, 0) / ages.length);
+                    const oldestAge = Math.max(...ages);
+                    responseText += `- **Average ADR Age:** ${avgAge} days\n`;
+                    responseText += `- **Oldest ADR:** ${oldestAge} days\n`;
+                }
+                responseText += `\n`;
+            }
+            // Add action queue report
+            if (result.actionQueue) {
+                responseText += `---\n\n`;
+                responseText += formatActionReport(result.actionQueue, {
+                    projectPath,
+                    thresholdProfile: thresholdProfile || 'auto-detected',
+                });
+            }
+            else if (generateActions) {
+                responseText += `## No Actions Required\n\n`;
+                responseText += `All ADRs are up to date and within acceptable thresholds.\n`;
+            }
+            // Add summary stats
+            if (result.summary.byStatus) {
+                responseText += `\n---\n\n## ADR Status Distribution\n\n`;
+                Object.entries(result.summary.byStatus).forEach(([status, count]) => {
+                    responseText += `- **${status}:** ${count}\n`;
+                });
+            }
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: responseText,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: `# ADR Timeline Analysis Failed\n\n**Error:** ${error instanceof Error ? error.message : String(error)}\n\nPlease check that the ADR directory exists and contains valid ADR files.`,
+                    },
+                ],
+                isError: true,
+            };
+        }
+    }
+    async reviewExistingAdrs(args) {
+        const { reviewExistingAdrs } = await import('./tools/review-existing-adrs-tool.js');
+        return await reviewExistingAdrs(args);
+    }
+    /**
+     * ADR validation tool implementations
+     */
+    async validateAdr(args) {
+        const { validateAdr } = await import('./tools/adr-validation-tool.js');
+        return await validateAdr(args);
+    }
+    async validateAllAdrs(args) {
+        const { validateAllAdrs } = await import('./tools/adr-validation-tool.js');
+        return await validateAllAdrs(args);
+    }
+    /**
+     * Research integration tool implementations
+     */
+    async incorporateResearch(args) {
+        const { incorporateResearch } = await import('./tools/research-integration-tool.js');
+        return await incorporateResearch(args);
+    }
+    async createResearchTemplate(args) {
+        const { createResearchTemplate } = await import('./tools/research-integration-tool.js');
+        return await createResearchTemplate(args);
+    }
+    async requestActionConfirmation(args) {
+        const { requestActionConfirmation } = await import('./tools/research-integration-tool.js');
+        return await requestActionConfirmation(args);
+    }
+    /**
+     * Rule generation and validation tool implementations
+     */
+    async generateRules(args) {
+        const { generateRules } = await import('./tools/rule-generation-tool.js');
+        return await generateRules(args);
+    }
+    async validateRules(args) {
+        const { validateRules } = await import('./tools/rule-generation-tool.js');
+        return await validateRules(args);
+    }
+    async createRuleSet(args) {
+        const { createRuleSet } = await import('./tools/rule-generation-tool.js');
+        return await createRuleSet(args);
+    }
+    /**
+     * Environment analysis tool implementation
+     */
+    async analyzeEnvironment(args) {
+        const { analyzeEnvironment } = await import('./tools/environment-analysis-tool.js');
+        return await analyzeEnvironment(args);
+    }
+    /**
+     * Research question generation tool implementation
+     */
+    async generateResearchQuestions(args) {
+        const { generateResearchQuestions } = await import('./tools/research-question-tool.js');
+        return await generateResearchQuestions(args);
+    }
+    /**
+     * Perform research tool implementation
+     */
+    async performResearch(args, context) {
+        const ctx = context || createNoOpContext();
+        if (!('question' in args) || typeof args['question'] !== 'string') {
+            throw new McpAdrError('Missing required parameter: question', 'INVALID_ARGUMENTS');
+        }
+        try {
+            ctx.info('🔍 Starting research process...');
+            ctx.report_progress(0, 100);
+            ctx.info('📊 Phase 1: Initializing research framework');
+            ctx.report_progress(10, 100);
+            const { performResearch } = await import('./tools/perform-research-tool.js');
+            ctx.info('📚 Phase 2: Executing research orchestration');
+            ctx.report_progress(20, 100);
+            const result = await performResearch(args, ctx // ✅ Pass context to tool function for progress updates
+            );
+            return result;
+        }
+        catch (error) {
+            ctx.error?.(`❌ Research execution failed: ${error instanceof Error ? error.message : String(error)}`);
+            throw new McpAdrError(`Failed to perform research: ${error instanceof Error ? error.message : String(error)}`, 'RESEARCH_EXECUTION_ERROR');
+        }
+    }
+    /**
+     * Search codebase tool implementation
+     */
+    async searchCodebase(args) {
+        if (!('query' in args) || typeof args['query'] !== 'string') {
+            throw new McpAdrError('Missing required parameter: query', 'INVALID_ARGUMENTS');
+        }
+        try {
+            const { searchCodebaseTool } = await import('./tools/search-codebase-tool.js');
+            return await searchCodebaseTool(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to search codebase: ${error instanceof Error ? error.message : String(error)}`, 'SEARCH_ERROR');
+        }
+    }
+    /**
+     * Deployment analysis tool implementation
+     */
+    async analyzeDeploymentProgress(args) {
+        const { analyzeDeploymentProgress } = await import('./tools/deployment-analysis-tool.js');
+        return await analyzeDeploymentProgress(args);
+    }
+    /**
+     * Apply content masking to MCP response
+     */
+    /**
+     * Track memory operations performed by tools
+     */
+    async trackMemoryOperations(toolName, parameters, result, success) {
+        try {
+            // Check if memory integration was enabled and used
+            if (parameters?.enableMemoryIntegration === false) {
+                return; // Memory integration was explicitly disabled
+            }
+            // Extract memory operation information from result
+            const memoryOps = this.extractMemoryOperations(toolName, parameters, result);
+            if (memoryOps.length > 0) {
+                // Store memory operation tracking in knowledge graph
+                for (const op of memoryOps) {
+                    await this.kgManager.addMemoryExecution(toolName, op.action, op.entityType, success && op.success, op.details);
+                }
+            }
+        }
+        catch (error) {
+            // Don't let memory tracking errors break execution
+            console.error('[WARN] Memory operation tracking failed:', error);
+        }
+    }
+    /**
+     * Extract memory operation details from tool execution
+     */
+    extractMemoryOperations(toolName, parameters, result) {
+        const operations = [];
+        // Define memory-enabled tools and their expected operations
+        const memoryEnabledTools = {
+            analyze_content_security: {
+                entityType: 'security_pattern',
+                actions: ['store_pattern', 'analyze_institutional_security', 'track_evolution'],
+            },
+            analyze_environment: {
+                entityType: 'environment_snapshot',
+                actions: ['store_snapshot', 'analyze_trends', 'compare_configurations'],
+            },
+            deployment_readiness: {
+                entityType: 'deployment_assessment',
+                actions: ['store_assessment', 'migrate_history', 'analyze_patterns'],
+            },
+            troubleshoot_guided_workflow: {
+                entityType: 'troubleshooting_session',
+                actions: ['store_session', 'pattern_recognition', 'suggest_adrs', 'generate_research'],
+            },
+        };
+        // Check if this tool supports memory operations
+        const toolConfig = memoryEnabledTools[toolName];
+        if (!toolConfig) {
+            return operations; // Tool doesn't support memory operations
+        }
+        // Extract memory operation details from result
+        if (result?.memoryIntegration) {
+            const memoryInfo = result.memoryIntegration;
+            // Pattern entity storage operation
+            if (memoryInfo.entityStored || memoryInfo.patternStored) {
+                operations.push({
+                    action: 'entity_storage',
+                    entityType: toolConfig.entityType,
+                    success: memoryInfo.storageSuccess !== false,
+                    details: {
+                        entityId: memoryInfo.entityId || memoryInfo.patternId,
+                        entityCount: memoryInfo.entityCount || 1,
+                        storageMethod: memoryInfo.storageMethod || 'standard',
+                    },
+                });
+            }
+            // Historical analysis operation
+            if (memoryInfo.historicalAnalysis || memoryInfo.trendAnalysis) {
+                operations.push({
+                    action: 'historical_analysis',
+                    entityType: toolConfig.entityType,
+                    success: memoryInfo.analysisSuccess !== false,
+                    details: {
+                        analysisType: memoryInfo.analysisType || 'trend_analysis',
+                        entitiesAnalyzed: memoryInfo.entitiesAnalyzed || 0,
+                        insights: memoryInfo.insights || [],
+                    },
+                });
+            }
+            // Evolution tracking operation
+            if (memoryInfo.evolutionTracking) {
+                operations.push({
+                    action: 'evolution_tracking',
+                    entityType: toolConfig.entityType,
+                    success: memoryInfo.evolutionSuccess !== false,
+                    details: {
+                        improvements: memoryInfo.improvements || [],
+                        degradations: memoryInfo.degradations || [],
+                        recommendations: memoryInfo.recommendations || [],
+                    },
+                });
+            }
+            // Migration operation (for deployment readiness)
+            if (memoryInfo.migrationCompleted) {
+                operations.push({
+                    action: 'data_migration',
+                    entityType: toolConfig.entityType,
+                    success: memoryInfo.migrationSuccess !== false,
+                    details: {
+                        migratedRecords: memoryInfo.migratedRecords || 0,
+                        migrationMethod: memoryInfo.migrationMethod || 'json_to_memory',
+                    },
+                });
+            }
+        }
+        // If no specific memory integration info, infer from parameters
+        if (operations.length === 0 && parameters?.enableMemoryIntegration !== false) {
+            // Default assumption: entity was stored
+            operations.push({
+                action: 'entity_storage',
+                entityType: toolConfig.entityType,
+                success: true, // Assume success if no explicit info
+                details: {
+                    entityCount: 1,
+                    storageMethod: 'inferred',
+                    note: 'Memory operation inferred from tool execution',
+                },
+            });
+        }
+        return operations;
+    }
+    /**
+     * Track tool execution in knowledge graph
+     */
+    async trackToolExecution(toolName, parameters, result, success, error) {
+        try {
+            // Extract intentId from metadata if available
+            let intentId;
+            if (result?.metadata?.intentId) {
+                intentId = result.metadata.intentId;
+            }
+            else {
+                // Check for active intents that might be related to this tool execution
+                const activeIntents = await this.kgManager.getActiveIntents();
+                if (activeIntents.length > 0) {
+                    // Use the most recent active intent
+                    const latestIntent = activeIntents[activeIntents.length - 1];
+                    if (latestIntent) {
+                        intentId = latestIntent.intentId;
+                    }
+                }
+            }
+            // If no intent found, create a standalone execution record
+            if (!intentId) {
+                // Extract human request from conversation context if available
+                let humanRequest = `Standalone tool execution: ${toolName}`;
+                if (parameters?.conversationContext?.humanRequest) {
+                    humanRequest = parameters.conversationContext.humanRequest;
+                }
+                intentId = await this.kgManager.createIntent(humanRequest, [`Execute ${toolName}`, 'Complete tool operation'], 'medium');
+            }
+            // Determine tasks created/modified from tool operation
+            const todoTasksCreated = [];
+            const todoTasksModified = [];
+            // Extract task information from result metadata
+            if (result?.metadata) {
+                if (result.metadata.tasksCreated) {
+                    todoTasksCreated.push(...result.metadata.tasksCreated);
+                }
+                if (result.metadata.tasksModified) {
+                    todoTasksModified.push(...result.metadata.tasksModified);
+                }
+                if (result.metadata.taskIds) {
+                    todoTasksModified.push(...result.metadata.taskIds);
+                }
+            }
+            // Track memory operations if present
+            await this.trackMemoryOperations(toolName, parameters, result, success);
+            // Store execution in knowledge graph
+            await this.kgManager.addToolExecution(intentId, toolName, parameters, result, success, todoTasksCreated, todoTasksModified, error);
+            // If execution completed successfully, update intent status
+            if (success && !error) {
+                // Check if this might be the final tool in a chain
+                const intent = await this.kgManager.getIntentById(intentId);
+                if (intent && intent.currentStatus === 'executing') {
+                    // Simple heuristic: if tool is a "completion" type tool, mark intent as completed
+                    const completionTools = ['smart_git_push', 'generate_deployment_guidance', 'smart_score'];
+                    if (completionTools.includes(toolName)) {
+                        await this.kgManager.updateIntentStatus(intentId, 'completed');
+                    }
+                }
+            }
+        }
+        catch (trackingError) {
+            // Don't let tracking errors break tool execution
+            console.error('[WARN] Knowledge graph tracking failed:', trackingError);
+        }
+    }
+    async applyOutputMasking(response) {
+        try {
+            return await maskMcpResponse(response, this.maskingConfig);
+        }
+        catch (error) {
+            // If masking fails, log warning and return original response
+            // Log to stderr to avoid corrupting MCP protocol
+            console.error('[WARN] Output masking failed:', error);
+            return response;
+        }
+    }
+    /**
+     * Enrich response with state reinforcement and apply masking
+     *
+     * Implements Phase 2 of context decay mitigation by injecting
+     * context reminders every N turns or when response exceeds token threshold.
+     *
+     * Phase 3 extension: Records conversation turns to structured external memory.
+     */
+    async enrichResponseWithStateReinforcement(response, toolName, toolArgs) {
+        const startTime = Date.now();
+        try {
+            // Extract text content from response
+            const textContent = response.content
+                .filter((item) => item.type === 'text')
+                .map(item => item.text)
+                .join('\n\n');
+            if (!textContent) {
+                // No text content to enrich, just apply masking
+                return await this.applyOutputMasking(response);
+            }
+            // Enrich with state reinforcement (Phase 2)
+            const enriched = await this.stateReinforcementManager.enrichResponseWithContext(textContent);
+            // Prepare final response
+            let finalResponse;
+            // Replace text content with enriched version if context was injected
+            if (enriched.contextInjected) {
+                finalResponse = {
+                    ...response,
+                    content: response.content.map(item => {
+                        if (item.type === 'text') {
+                            return {
+                                type: 'text',
+                                text: enriched.enrichedContent,
+                            };
+                        }
+                        return item;
+                    }),
+                };
+            }
+            else {
+                finalResponse = response;
+            }
+            // Record conversation turn (Phase 3: Structured External Memory)
+            if (toolName) {
+                const duration = Date.now() - startTime;
+                // Check if response has expandableId (from tiered response)
+                const expandableIdMatch = textContent.match(/expandableId:\s*(\S+)/);
+                const expandableId = expandableIdMatch ? expandableIdMatch[1] : undefined;
+                await this.conversationMemoryManager.recordTurn({
+                    type: 'tool_call',
+                    toolName,
+                    toolArgs,
+                }, {
+                    content: enriched.enrichedContent || textContent,
+                    tokenCount: enriched.tokenCount,
+                    contextInjected: enriched.contextInjected,
+                    ...(expandableId ? { expandableId } : {}),
+                }, {
+                    duration,
+                    cacheHit: false, // Could be enhanced to track cache hits
+                    errorOccurred: false,
+                });
+                this.logger.debug(`Conversation turn recorded for ${toolName}`, 'McpAdrAnalysisServer', {
+                    turnNumber: enriched.turnNumber,
+                });
+            }
+            // Apply masking to final response
+            return await this.applyOutputMasking(finalResponse);
+        }
+        catch (error) {
+            this.logger.error('State reinforcement or conversation recording failed, returning original response', 'McpAdrAnalysisServer', error instanceof Error ? error : undefined);
+            // Fallback to just masking if enrichment fails
+            return await this.applyOutputMasking(response);
+        }
+    }
+    /**
+     * Read MCP resource with prompt-driven caching
+     */
+    async readResource(uri) {
+        try {
+            // Import resource router and templated resources (ensures routes are registered)
+            const { resourceRouter } = await import('./resources/resource-router.js');
+            // Import templated resources to register routes
+            await import('./resources/adr-by-id-resource.js');
+            await import('./resources/research-by-topic-resource.js');
+            await import('./resources/todo-by-id-resource.js');
+            await import('./resources/rule-by-id-resource.js');
+            await import('./resources/technology-by-name-resource.js');
+            await import('./resources/pattern-by-name-resource.js');
+            await import('./resources/validated-pattern-by-platform-resource.js');
+            await import('./resources/pattern-sources-by-platform-resource.js');
+            await import('./resources/pattern-base-code-by-platform-resource.js');
+            // Phase 1 & 2 resources (PR #346)
+            await import('./resources/server-context-resource.js');
+            await import('./resources/memory-stats-resource.js');
+            await import('./resources/conversation-snapshot-resource.js');
+            await import('./resources/tool-catalog-resource.js');
+            await import('./resources/adrs-discovered-resource.js');
+            // Knowledge Graph Resource (ADR-018)
+            const { generateKnowledgeGraphResource } = await import('./resources/knowledge-graph-resource.js');
+            // Handle knowledge://graph specially to inject KnowledgeGraphManager
+            if (uri === 'knowledge://graph') {
+                const url = new globalThis.URL(uri);
+                const result = await generateKnowledgeGraphResource({}, url.searchParams, this.kgManager);
+                return {
+                    contents: [
+                        {
+                            uri,
+                            mimeType: result.contentType,
+                            text: JSON.stringify(result.data, null, 2),
+                        },
+                    ],
+                    _meta: {
+                        lastModified: result.lastModified,
+                        etag: result.etag,
+                        cacheKey: result.cacheKey,
+                    },
+                };
+            }
+            // Try routing first (handles templated resources)
+            if (resourceRouter.canRoute(uri)) {
+                const result = await resourceRouter.route(uri);
+                return {
+                    contents: [
+                        {
+                            uri,
+                            mimeType: result.contentType,
+                            text: JSON.stringify(result.data, null, 2),
+                        },
+                    ],
+                    _meta: {
+                        lastModified: result.lastModified,
+                        etag: result.etag,
+                        cacheKey: result.cacheKey,
+                    },
+                };
+            }
+            // Fall back to static resource handling
+            // Parse URI to determine resource type and parameters
+            const url = new globalThis.URL(uri);
+            // For a non-special scheme like `adr://adr_list`, WHATWG URL puts the name in
+            // `host`, not `pathname` -- pathname is ''. Reading pathname alone made every one
+            // of the 16 cases below unreachable: resourceType was always '', so the switch fell
+            // straight to `default` and threw "Unknown resource type: " with nothing after the
+            // colon. 16 of the 17 concrete resources advertised in resources/list were dead.
+            //
+            //   adr://adr_list  ->  host 'adr_list', pathname ''
+            //   adr://adr/{id}  ->  host 'adr',      pathname '/%7Bid%7D'
+            //
+            // Prefer the host; fall back to pathname so path-style URIs still resolve.
+            const resourceType = url.host || url.pathname.replace('/', '');
+            const params = Object.fromEntries(url.searchParams.entries());
+            switch (resourceType) {
+                case 'architectural_knowledge_graph': {
+                    const { generateArchitecturalKnowledgeGraph } = await import('./resources/index.js');
+                    const projectPath = params['projectPath'] || process.cwd();
+                    // Generate resource directly (caching is now handled through AI delegation)
+                    const result = await generateArchitecturalKnowledgeGraph(projectPath);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                    };
+                }
+                case 'analysis_report': {
+                    const { generateAnalysisReport } = await import('./resources/index.js');
+                    const projectPath = params['projectPath'] || process.cwd();
+                    const focusAreas = params['focusAreas'] ? params['focusAreas'].split(',') : undefined;
+                    // Generate resource directly (caching is now handled through AI delegation)
+                    const result = await generateAnalysisReport(projectPath, focusAreas);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                    };
+                }
+                case 'adr_list': {
+                    const { generateAdrList } = await import('./resources/index.js');
+                    const { getAdrDirectoryPath } = await import('./utils/config.js');
+                    const path = await import('path');
+                    // Use absolute ADR path relative to project
+                    const absoluteAdrPath = params['adrDirectory']
+                        ? path.resolve(this.config.projectPath, params['adrDirectory'])
+                        : getAdrDirectoryPath(this.config);
+                    // Generate resource directly (caching is now handled through AI delegation)
+                    const result = await generateAdrList(absoluteAdrPath, this.config.projectPath);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                    };
+                }
+                case 'todo_list': {
+                    const { generateTodoListResource } = await import('./resources/todo-list-resource.js');
+                    const result = await generateTodoListResource();
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'research_index': {
+                    const { generateResearchIndexResource } = await import('./resources/research-index-resource.js');
+                    const result = await generateResearchIndexResource();
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'rule_catalog': {
+                    const { generateRuleCatalogResource } = await import('./resources/rule-catalog-resource.js');
+                    const result = await generateRuleCatalogResource();
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'rule_generation': {
+                    const { generateRuleGenerationResource } = await import('./resources/rule-generation-resource.js');
+                    const result = await generateRuleGenerationResource(undefined, url.searchParams);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'project_status': {
+                    const { generateProjectStatusResource } = await import('./resources/project-status-resource.js');
+                    const result = await generateProjectStatusResource();
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'deployment_status': {
+                    const { generateDeploymentStatusResource } = await import('./resources/deployment-status-resource.js');
+                    const result = await generateDeploymentStatusResource(undefined, url.searchParams);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'environment_analysis': {
+                    const { generateEnvironmentAnalysisResource } = await import('./resources/environment-analysis-resource.js');
+                    const result = await generateEnvironmentAnalysisResource(undefined, url.searchParams);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'memory_snapshots': {
+                    const { generateMemorySnapshotsResource } = await import('./resources/memory-snapshots-resource.js');
+                    const result = await generateMemorySnapshotsResource(undefined, url.searchParams);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'project_metrics': {
+                    const { generateProjectMetricsResource } = await import('./resources/project-metrics-resource.js');
+                    const result = await generateProjectMetricsResource();
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'deployment_history': {
+                    const { generateDeploymentHistoryResource } = await import('./resources/deployment-history-resource.js');
+                    const result = await generateDeploymentHistoryResource(undefined, url.searchParams);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'release_history': {
+                    const { generateReleaseHistoryResource } = await import('./resources/release-history-resource.js');
+                    const releaseProjectPath = process.env['PROJECT_PATH'] || process.cwd();
+                    const result = await generateReleaseHistoryResource(releaseProjectPath, url.searchParams);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'code_quality': {
+                    const { generateCodeQualityResource } = await import('./resources/code-quality-resource.js');
+                    const result = await generateCodeQualityResource(undefined, url.searchParams);
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                case 'validated_patterns': {
+                    const { generateValidatedPatternsCatalogResource } = await import('./resources/validated-patterns-catalog-resource.js');
+                    const result = await generateValidatedPatternsCatalogResource();
+                    return {
+                        contents: [
+                            {
+                                uri,
+                                mimeType: result.contentType,
+                                text: JSON.stringify(result.data, null, 2),
+                            },
+                        ],
+                        _meta: {
+                            lastModified: result.lastModified,
+                            etag: result.etag,
+                            cacheKey: result.cacheKey,
+                        },
+                    };
+                }
+                default:
+                    throw new McpAdrError(`Unknown resource type: ${resourceType}`, 'UNKNOWN_RESOURCE');
+            }
+        }
+        catch (error) {
+            if (error instanceof McpAdrError) {
+                throw error;
+            }
+            throw new McpAdrError(`Failed to read resource: ${error instanceof Error ? error.message : String(error)}`, 'RESOURCE_ERROR');
+        }
+    }
+    /**
+     * Start the server
+     */
+    async start() {
+        // Validate configuration before starting
+        await this.validateConfiguration();
+        // Initialize memory entity manager
+        await this.memoryEntityManager.initialize();
+        this.logger.info('Memory Entity Manager initialized', 'McpAdrAnalysisServer');
+        // Initialize conversation memory manager (Phase 3: Structured External Memory)
+        await this.conversationMemoryManager.initialize();
+        this.logger.info('Phase 3 (Structured External Memory) initialized', 'McpAdrAnalysisServer');
+        // Generate initial server context file
+        try {
+            await this.contextGenerator.writeContextFile(this.kgManager, this.memoryEntityManager, this.conversationMemoryManager);
+            this.logger.info('Server context file generated at .mcp-server-context.md', 'McpAdrAnalysisServer');
+        }
+        catch (error) {
+            this.logger.warn('Failed to generate initial server context file', 'McpAdrAnalysisServer', {
+                error: error instanceof Error ? error.message : String(error),
+            });
+        }
+        const transport = new StdioServerTransport();
+        await this.server.connect(transport);
+        // Keep the process alive
+        process.on('SIGINT', async () => {
+            await this.server.close();
+            process.exit(0);
+        });
+    }
+    /**
+     * File system tool implementations
+     */
+    /**
+     * List accessible roots (MCP best practice)
+     */
+    async listRoots() {
+        const roots = this.rootManager.listRoots();
+        const rootsList = roots
+            .map(r => `### ${r.name}\n\n**Path**: \`${r.path}\`\n\n**Description**: ${r.description}\n`)
+            .join('\n');
+        return {
+            content: [
+                {
+                    type: 'text',
+                    text: `# Available File System Roots\n\nThese are the directories that can be accessed by this MCP server.\n\n${rootsList}\nUse these paths with \`read_directory\` and \`read_file\` tools to explore and access files.`,
+                },
+            ],
+        };
+    }
+    /**
+     * Read directory contents (MCP best practice for autonomous file discovery)
+     */
+    async readDirectory(args) {
+        const targetPath = args.path || this.config.projectPath;
+        try {
+            const path = await import('path');
+            const resolvedPath = path.resolve(targetPath);
+            // Security check: ensure path is within accessible roots
+            if (!this.rootManager.isPathAllowed(resolvedPath)) {
+                const roots = this.rootManager.listRoots();
+                const rootList = roots.map(r => `  - ${r.name}: ${r.path}`).join('\n');
+                throw new McpAdrError(`Access denied: Path '${targetPath}' is outside accessible roots.\n\nAccessible roots:\n${rootList}\n\nUse list_roots tool for more details.`, 'ACCESS_DENIED');
+            }
+            const { readdir } = await import('fs/promises');
+            const entries = await readdir(resolvedPath, { withFileTypes: true });
+            const files = entries.filter(e => e.isFile()).map(e => `📄 ${e.name}`);
+            const dirs = entries.filter(e => e.isDirectory()).map(e => `📁 ${e.name}/`);
+            const root = this.rootManager.getRootForPath(resolvedPath);
+            const relPath = this.rootManager.getRelativePathFromRoot(resolvedPath);
+            const filesList = files.length > 0 ? files.join('\n') : '(no files)';
+            const dirsList = dirs.length > 0 ? dirs.join('\n') : '(no directories)';
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: `# Directory: ${targetPath}\n\n**Root**: ${root?.name}\n**Relative Path**: ${relPath || '/'}\n**Full Path**: \`${resolvedPath}\`\n\n## Directories (${dirs.length})\n\n${dirsList}\n\n## Files (${files.length})\n\n${filesList}`,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to read directory: ${error instanceof Error ? error.message : String(error)}`, 'DIRECTORY_READ_ERROR');
+        }
+    }
+    async readFile(args) {
+        const { filePath } = args;
+        try {
+            const fs = await import('fs/promises');
+            const path = await import('path');
+            // Resolve path (handle both relative and absolute paths)
+            const safePath = path.resolve(filePath);
+            // Security check: ensure path is within accessible roots
+            if (!this.rootManager.isPathAllowed(safePath)) {
+                const roots = this.rootManager.listRoots();
+                const rootList = roots.map(r => `  - ${r.name}: ${r.path}`).join('\n');
+                throw new McpAdrError(`Access denied: Path '${filePath}' is outside accessible roots.\n\nAccessible roots:\n${rootList}\n\nUse list_roots tool for more details.`, 'ACCESS_DENIED');
+            }
+            const content = await fs.readFile(safePath, 'utf-8');
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: content,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to read file: ${error instanceof Error ? error.message : String(error)}`, 'FILE_READ_ERROR');
+        }
+    }
+    async writeFile(args) {
+        const { filePath, content } = args;
+        try {
+            const fs = await import('fs/promises');
+            const path = await import('path');
+            // Resolve path relative to project path for security
+            const safePath = path.resolve(this.config.projectPath, filePath);
+            // Security check: ensure path is within project directory
+            if (!safePath.startsWith(this.config.projectPath)) {
+                throw new McpAdrError('Access denied: Path is outside project directory', 'ACCESS_DENIED');
+            }
+            // Ensure directory exists
+            await fs.mkdir(path.dirname(safePath), { recursive: true });
+            // Write file
+            await fs.writeFile(safePath, content, 'utf-8');
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: `Successfully wrote to ${filePath}`,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to write file: ${error instanceof Error ? error.message : String(error)}`, 'FILE_WRITE_ERROR');
+        }
+    }
+    async listDirectory(args) {
+        const { path: dirPath } = args;
+        try {
+            const fs = await import('fs/promises');
+            const path = await import('path');
+            // Resolve path relative to project path for security
+            const safePath = path.resolve(this.config.projectPath, dirPath);
+            // Security check: ensure path is within project directory
+            if (!safePath.startsWith(this.config.projectPath)) {
+                throw new McpAdrError('Access denied: Path is outside project directory', 'ACCESS_DENIED');
+            }
+            const entries = await fs.readdir(safePath, { withFileTypes: true });
+            const fileList = entries.map(entry => ({
+                name: entry.name,
+                type: entry.isDirectory() ? 'directory' : 'file',
+                path: path.join(dirPath, entry.name),
+            }));
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: JSON.stringify(fileList, null, 2),
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to list directory: ${error instanceof Error ? error.message : String(error)}`, 'DIRECTORY_LIST_ERROR');
+        }
+    }
+    async generateDeploymentGuidance(args) {
+        try {
+            const { generateDeploymentGuidance } = await import('./tools/deployment-guidance-tool.js');
+            return await generateDeploymentGuidance(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Deployment guidance generation failed: ${error instanceof Error ? error.message : String(error)}`, 'DEPLOYMENT_GUIDANCE_ERROR');
+        }
+    }
+    async smartGitPush(args) {
+        try {
+            const { smartGitPush } = await import('./tools/smart-git-push-tool-v2.js');
+            return await smartGitPush(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Smart git push failed: ${error instanceof Error ? error.message : String(error)}`, 'SMART_GIT_PUSH_ERROR');
+        }
+    }
+    async deploymentReadiness(args) {
+        try {
+            const { deploymentReadiness } = await import('./tools/deployment-readiness-tool.js');
+            return await deploymentReadiness(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Deployment readiness check failed: ${error instanceof Error ? error.message : String(error)}`, 'DEPLOYMENT_READINESS_ERROR');
+        }
+    }
+    async releaseTracking(args) {
+        try {
+            const { releaseTracking } = await import('./tools/release-tracking-tool.js');
+            return await releaseTracking(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Release tracking failed: ${error instanceof Error ? error.message : String(error)}`, 'RELEASE_TRACKING_ERROR');
+        }
+    }
+    async generateAdrTodo(args) {
+        try {
+            const { generateAdrTodo } = await import('./tools/generate-adr-todo-tool.js');
+            return await generateAdrTodo(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`generate_adr_todo failed: ${error instanceof Error ? error.message : String(error)}`, 'GENERATE_ADR_TODO_ERROR');
+        }
+    }
+    async troubleshootGuidedWorkflow(args) {
+        try {
+            const { troubleshootGuidedWorkflow } = await import('./tools/troubleshoot-guided-workflow-tool.js');
+            return await troubleshootGuidedWorkflow(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Troubleshoot guided workflow failed: ${error instanceof Error ? error.message : String(error)}`, 'TROUBLESHOOT_GUIDED_WORKFLOW_ERROR');
+        }
+    }
+    async smartScore(_args) {
+        // Smart score tool was removed - return deprecation message
+        return {
+            content: [
+                {
+                    type: 'text',
+                    text: `⚠️ **Smart Score Tool Deprecated**
+
+This tool has been deprecated and replaced with memory-centric health scoring.
+
+**Replacement:** The new MemoryHealthScoring system tracks:
+- Memory quality and relevance
+- Retrieval performance
+- Entity relationship coherence
+- Context utilization
+- Decision alignment
+
+**Migration:** Health scoring is now integrated into the knowledge graph and automatically calculated based on memory usage patterns.`,
+                },
+            ],
+            isError: false,
+        };
+    }
+    async mcpPlanning(args) {
+        try {
+            const { mcpPlanning } = await import('./tools/mcp-planning-tool.js');
+            return await mcpPlanning(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`MCP planning failed: ${error instanceof Error ? error.message : String(error)}`, 'MCP_PLANNING_ERROR');
+        }
+    }
+    async memoryLoading(args) {
+        try {
+            const { MemoryLoadingTool } = await import('./tools/memory-loading-tool.js');
+            const memoryTool = new MemoryLoadingTool();
+            return await memoryTool.execute(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Memory loading failed: ${error instanceof Error ? error.message : String(error)}`, 'MEMORY_LOADING_ERROR');
+        }
+    }
+    async expandAnalysisSection(args) {
+        try {
+            const { expandAnalysisSection } = await import('./tools/expand-analysis-tool.js');
+            return await expandAnalysisSection(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to expand analysis: ${error instanceof Error ? error.message : String(error)}`, 'EXPAND_ANALYSIS_ERROR');
+        }
+    }
+    async interactiveAdrPlanning(args) {
+        try {
+            const { interactiveAdrPlanning } = await import('./tools/interactive-adr-planning-tool.js');
+            return await interactiveAdrPlanning(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Interactive ADR planning failed: ${error instanceof Error ? error.message : String(error)}`, 'INTERACTIVE_ADR_PLANNING_ERROR');
+        }
+    }
+    /**
+     * Tool chain orchestrator implementation
+     */
+    async toolChainOrchestrator(args) {
+        try {
+            const { toolChainOrchestrator } = await import('./tools/tool-chain-orchestrator.js');
+            return await toolChainOrchestrator(args);
+        }
+        catch (error) {
+            throw new McpAdrError(`Tool chain orchestration failed: ${error instanceof Error ? error.message : String(error)}`, 'TOOL_CHAIN_ORCHESTRATOR_ERROR');
+        }
+    }
+    /**
+     * Phase 3: Expand Memory Tool
+     * Retrieves and expands stored content from tiered responses
+     */
+    async expandMemory(args) {
+        try {
+            const { expandMemory } = await import('./tools/conversation-memory-tool.js');
+            return await expandMemory(args, this.conversationMemoryManager);
+        }
+        catch (error) {
+            throw new McpAdrError(`Memory expansion failed: ${error instanceof Error ? error.message : String(error)}`, 'MEMORY_EXPANSION_ERROR');
+        }
+    }
+    /**
+     * Phase 3: Query Conversation History Tool
+     * Searches and retrieves conversation sessions
+     */
+    async queryConversationHistory(args) {
+        try {
+            const { queryConversationHistory } = await import('./tools/conversation-memory-tool.js');
+            return await queryConversationHistory(args, this.conversationMemoryManager);
+        }
+        catch (error) {
+            throw new McpAdrError(`Conversation history query failed: ${error instanceof Error ? error.message : String(error)}`, 'CONVERSATION_QUERY_ERROR');
+        }
+    }
+    /**
+     * Phase 3: Get Conversation Snapshot Tool
+     * Retrieves current conversation context
+     */
+    async getConversationSnapshot(args) {
+        try {
+            const { getConversationSnapshot } = await import('./tools/conversation-memory-tool.js');
+            return await getConversationSnapshot(args, this.conversationMemoryManager);
+        }
+        catch (error) {
+            throw new McpAdrError(`Conversation snapshot retrieval failed: ${error instanceof Error ? error.message : String(error)}`, 'SNAPSHOT_ERROR');
+        }
+    }
+    /**
+     * Phase 3: Get Memory Statistics Tool
+     * Retrieves conversation memory statistics
+     */
+    async getMemoryStats() {
+        try {
+            const { getMemoryStats } = await import('./tools/conversation-memory-tool.js');
+            return await getMemoryStats(this.conversationMemoryManager);
+        }
+        catch (error) {
+            throw new McpAdrError(`Memory stats retrieval failed: ${error instanceof Error ? error.message : String(error)}`, 'MEMORY_STATS_ERROR');
+        }
+    }
+    /**
+     * Update Knowledge Tool (ADR-018)
+     * Simple CRUD operations for knowledge graph
+     */
+    async updateKnowledge(args) {
+        try {
+            const { updateKnowledge } = await import('./tools/update-knowledge-tool.js');
+            return await updateKnowledge(args, createNoOpContext(), this.kgManager);
+        }
+        catch (error) {
+            throw new McpAdrError(`Knowledge update failed: ${error instanceof Error ? error.message : String(error)}`, 'KNOWLEDGE_UPDATE_ERROR');
+        }
+    }
+    /**
+     * Get Server Context Tool
+     * Generates comprehensive server context file for LLM @ referencing
+     */
+    async getServerContext(args) {
+        try {
+            const { getServerContext } = await import('./tools/get-server-context-tool.js');
+            return await getServerContext(args, this.kgManager, this.memoryEntityManager, this.conversationMemoryManager);
+        }
+        catch (error) {
+            throw new McpAdrError(`Server context generation failed: ${error instanceof Error ? error.message : String(error)}`, 'SERVER_CONTEXT_ERROR');
+        }
+    }
+    /**
+     * Get Current Datetime Tool
+     * Returns the current date and time in various formats for ADR generation and timestamping
+     */
+    async getCurrentDatetime(args) {
+        const { timezone = 'UTC', format = 'all', includeTimestamp = true } = args;
+        try {
+            const now = new Date();
+            // Format date for different timezones
+            const formatOptions = {
+                timeZone: timezone,
+                year: 'numeric',
+                month: '2-digit',
+                day: '2-digit',
+                hour: '2-digit',
+                minute: '2-digit',
+                second: '2-digit',
+                hour12: false,
+            };
+            // Get date parts for the specified timezone
+            const formatter = new Intl.DateTimeFormat('en-CA', {
+                timeZone: timezone,
+                year: 'numeric',
+                month: '2-digit',
+                day: '2-digit',
+            });
+            const parts = formatter.formatToParts(now);
+            const year = parts.find(p => p.type === 'year')?.value || '';
+            const month = parts.find(p => p.type === 'month')?.value || '';
+            const day = parts.find(p => p.type === 'day')?.value || '';
+            // ADR date format: YYYY-MM-DD
+            const adrDate = `${year}-${month}-${day}`;
+            // ISO 8601 format
+            const isoDate = now.toISOString();
+            // Human-readable format
+            const humanFormatter = new Intl.DateTimeFormat('en-US', {
+                ...formatOptions,
+                weekday: 'long',
+                month: 'long',
+            });
+            const humanDate = humanFormatter.format(now);
+            // Build response based on requested format
+            let responseData = {};
+            switch (format) {
+                case 'iso':
+                    responseData = { iso: isoDate };
+                    break;
+                case 'human':
+                    responseData = { human: humanDate };
+                    break;
+                case 'adr':
+                    responseData = { adr: adrDate };
+                    break;
+                case 'all':
+                default:
+                    responseData = {
+                        iso: isoDate,
+                        human: humanDate,
+                        adr: adrDate,
+                        timezone: timezone,
+                    };
+            }
+            if (includeTimestamp) {
+                responseData['timestamp'] = now.getTime();
+            }
+            const responseText = `# Current Date and Time
+
+## Formats
+${format === 'all' || format === 'iso' ? `- **ISO 8601**: ${isoDate}` : ''}
+${format === 'all' || format === 'human' ? `- **Human Readable**: ${humanDate}` : ''}
+${format === 'all' || format === 'adr' ? `- **ADR Date (YYYY-MM-DD)**: ${adrDate}` : ''}
+${format === 'all' ? `- **Timezone**: ${timezone}` : ''}
+${includeTimestamp ? `- **Unix Timestamp (ms)**: ${now.getTime()}` : ''}
+
+## Usage for ADR Generation
+
+When generating ADRs, use the ADR date format (\`${adrDate}\`) in the Date field:
+
+\`\`\`markdown
+# ADR-XXXX: [Title]
+
+## Date
+${adrDate}
+
+## Status
+Proposed
+\`\`\`
+
+## Raw Data
+
+\`\`\`json
+${JSON.stringify(responseData, null, 2)}
+\`\`\`
+`;
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: responseText,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to get current datetime: ${error instanceof Error ? error.message : String(error)}`, 'DATETIME_ERROR');
+        }
+    }
+    /**
+     * Set Project Path Tool - Dynamic Session Configuration
+     *
+     * @description Dynamically sets the active project path for the current session.
+     * This allows switching between projects without restarting the server or modifying
+     * environment variables. Updates both the config and the RootManager.
+     *
+     * @param args - Set project path arguments
+     * @param args.path - Absolute path to the project directory
+     * @param args.validatePath - Whether to validate the path exists (default: true)
+     * @returns Promise<CallToolResult> - Confirmation of the path change
+     */
+    async setProjectPath(args) {
+        const { path: newPath, validatePath = true } = args;
+        const { resolve } = await import('path');
+        try {
+            // Resolve to absolute path
+            const absolutePath = resolve(newPath);
+            const previousPath = this.config.projectPath;
+            // Validate the path if requested
+            if (validatePath) {
+                await validateProjectPath(absolutePath);
+            }
+            // Update the server configuration
+            this.config.projectPath = absolutePath;
+            // Re-initialize the RootManager with the new path
+            this.rootManager = new RootManager(absolutePath, this.config.adrDirectory);
+            this.logger.info(`Project path changed: ${previousPath} -> ${absolutePath}`);
+            const responseText = `# Project Path Updated
+
+## Configuration
+- **Previous Path**: \`${previousPath}\`
+- **New Path**: \`${absolutePath}\`
+- **ADR Directory**: \`${this.config.adrDirectory}\`
+- **Full ADR Path**: \`${resolve(absolutePath, this.config.adrDirectory)}\`
+
+## Status
+✅ Project path successfully updated for this session.
+
+## Note
+All subsequent tool calls will use this path as the default project path.
+You can still override it per-tool by passing \`projectPath\` as an argument.
+
+To make this permanent, set the \`PROJECT_PATH\` environment variable.
+`;
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: responseText,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to set project path: ${error instanceof Error ? error.message : String(error)}`, 'SET_PROJECT_PATH_ERROR');
+        }
+    }
+    /**
+     * Load Prompt Tool - CE-MCP Phase 4 Lazy Loading
+     *
+     * @description Loads prompts on-demand instead of eagerly loading all prompts at startup.
+     * This reduces token usage by ~96% (from 28K tokens to ~1K on-demand).
+     *
+     * @param args - Load prompt arguments
+     * @param args.promptName - Name of the prompt to load
+     * @param args.section - Optional section within the prompt
+     * @param args.estimateOnly - If true, returns only token estimate
+     * @returns Promise<CallToolResult> - Loaded prompt content or estimate
+     */
+    async loadPrompt(args) {
+        const { promptName, section, estimateOnly = false } = args;
+        // Import the prompt catalog dynamically to enable lazy loading
+        const { getPromptLoader, getPromptMetadata, calculateTokenSavings } = await import('./prompts/prompt-catalog.js');
+        const metadata = getPromptMetadata(promptName);
+        if (!metadata) {
+            const availablePrompts = [
+                'adr-suggestion',
+                'deployment-analysis',
+                'environment-analysis',
+                'research-question',
+                'rule-generation',
+                'analysis',
+                'research-integration',
+                'validated-pattern',
+                'security',
+            ];
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: JSON.stringify({
+                            success: false,
+                            error: `Unknown prompt: ${promptName}`,
+                            availablePrompts,
+                            hint: 'Use one of the available prompt names listed above',
+                        }, null, 2),
+                    },
+                ],
+                isError: true,
+            };
+        }
+        // If estimate only, return token information without loading
+        if (estimateOnly) {
+            const loader = getPromptLoader();
+            const estimatedTokens = loader.getEstimatedTokens(promptName, section);
+            const savings = calculateTokenSavings([promptName]);
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: JSON.stringify({
+                            success: true,
+                            promptName,
+                            section: section || 'full',
+                            estimatedTokens,
+                            metadata: {
+                                file: metadata.file,
+                                category: metadata.category,
+                                totalTokens: metadata.tokens,
+                                availableSections: metadata.sections,
+                                loadOnDemand: metadata.loadOnDemand,
+                            },
+                            tokenSavings: {
+                                loaded: savings.loaded,
+                                total: savings.total,
+                                saved: savings.saved,
+                                percentage: `${savings.percentage}%`,
+                            },
+                        }, null, 2),
+                    },
+                ],
+            };
+        }
+        // Load the prompt content
+        try {
+            const loader = getPromptLoader();
+            const content = await loader.loadPrompt(promptName, section);
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: `# Loaded Prompt: ${promptName}${section ? ` (section: ${section})` : ''}
+
+## Metadata
+- **Category**: ${metadata.category}
+- **Estimated Tokens**: ${metadata.tokens}
+- **Available Sections**: ${metadata.sections.join(', ')}
+
+## Content
+
+${content}
+
+---
+
+*Loaded on-demand via CE-MCP lazy loading system. Token savings: ~96% compared to eager loading all prompts.*
+`,
+                    },
+                ],
+            };
+        }
+        catch (error) {
+            throw new McpAdrError(`Failed to load prompt '${promptName}'${section ? ` section '${section}'` : ''}: ${error instanceof Error ? error.message : String(error)}`, 'PROMPT_LOAD_ERROR');
+        }
+    }
+}
+//# sourceMappingURL=mcp-adr-analysis-server.js.map