matryoshka-rlm 0.2.31 → 0.2.33

package/README.md

@@ -1,6 +1,7 @@
 # Matryoshka
 
 [![Tests](https://github.com/yogthos/Matryoshka/actions/workflows/test.yml/badge.svg)](https://github.com/yogthos/Matryoshka/actions/workflows/test.yml)
+[![SafeSkill 88/100](https://img.shields.io/badge/SafeSkill-88%2F100_Passes%20with%20Notes-yellow)](https://safeskill.dev/scan/yogthos-matryoshka)
 
 Process documents 100x larger than your LLM's context window—without vector databases or chunking heuristics.
 
@@ -54,6 +55,103 @@ The LLM outputs commands in the Nucleus DSL—an S-expression language designed
 <<<FINAL>>>13000000<<<END>>>
 ```
 
+#### Feature availability by execution path
+
+Matryoshka has two execution paths and not every primitive works in both:
+
+| Feature | `runRLM` (CLI / programmatic) | `lattice-mcp` (MCP server) |
+|---|---|---|
+| `(grep …)`, `(filter …)`, `(map …)`, etc. | ✅ | ✅ |
+| `(llm_query …)`, `(llm_batch …)` | ✅ | ✅ via MCP sampling protocol |
+| `(rlm_query …)`, `(rlm_batch …)` | ✅ (concurrent rlm_batch) | ✅ — child Nucleus session spawns via the same MCP sampling bridge; M suspensions per `rlm_query` call. `rlm_batch` runs **sequentially** (children one at a time) because the multi-turn suspension protocol only carries one pending request at a time — concurrent children would lose suspensions. Round-trip count is the same; wall-clock is N×slower for non-sampling clients. |
+| `(context N)` selector | ✅ (multi-doc via `runRLMFromContent(query, string[])`) | partial — `(context 0)` works; multi-doc loading not exposed via `lattice_load` |
+| `(grep "X" haystack)` | ✅ | ✅ |
+| `(show_vars)` | ✅ | ✅ (internal `_<name>` bindings filtered out) |
+| `FINAL_VAR(name)` resolution | ✅ | N/A — MCP returns query results directly |
+| `maxTimeoutMs` / `maxTokens` / `maxErrors` | ✅ | ❌ — MCP has its own session timeout |
+| `compactionThresholdChars` | ✅ | ❌ — MCP doesn't have a multi-turn FSM history |
+
+The resource-limit features remain `runRLM`-only. The recursive primitives (`rlm_query`/`rlm_batch`) work in both paths — the MCP path spawns a child `runRLMFromContent` whose `llmClient` is the same sampling bridge as the parent, so each child turn flows through the existing MCP suspension/sampling protocol.
+
+#### Recursive Primitives
+
+`rlm_query` spawns a child Nucleus session with its own FSM loop. The child runs to FINAL and returns a string — useful when a sub-task needs multi-turn reasoning over a structured handle:
+
+```scheme
+; Child sees the resolved handle as its working document, NOT a
+; JSON-stringified prompt blob. Lets the child use grep/lines/
+; chunk_by_lines over arrays without JSON-syntax noise.
+(rlm_query "extract dates" (context RESULTS))
+
+; No (context …) → child's document is the prompt itself.
+(rlm_query "summarize each error type")
+```
+
+`rlm_batch` runs the same per-item recursion across a collection. Each item produces one entry in the returned array, in input order. Per-item failures surface as `"Error: rlm_batch item N failed — …"` strings without aborting the rest of the batch:
+
+```scheme
+(rlm_batch (chunk_by_lines 100)
+  (lambda c (rlm_query "extract metrics" (context c))))
+```
+
+- **`runRLM`**: children fan out concurrently via a worker pool capped at `maxConcurrentSubcalls` (default 4).
+- **`lattice-mcp`**: children run **sequentially** because the multi-turn suspension protocol can carry only one pending request at a time. Round-trip count is identical to the concurrent path (N children × M turns each); only wall-clock differs.
+
+#### Multi-Context Loading
+
+Pass `string[]` to `runRLMFromContent` to load multiple documents. Address them via `(context N)`; index 0 is the default for primitives that don't specify a haystack:
+
+```scheme
+(grep "DEPLOY" (context 0))   ; deploy.log
+(grep "OUTAGE" (context 2))   ; comms.log
+
+; (context N) is just a term — pipe it anywhere a string is expected
+(rlm_query "scan" (context (context 1)))   ; child sees doc 1
+```
+
+Per-doc line numbers come back, so the LLM can cite "doc 0 line 4, doc 2 line 2" with confidence rather than inventing absolute offsets across a concatenation.
+
+#### Introspection
+
+```scheme
+(show_vars)   ; Returns a string summary of every binding currently
+              ; in scope. Useful before a (filter RESULTS …) or a
+              ; FINAL_VAR(name) reference when the LLM lost track of
+              ; what's bound. Same surface as the `lattice_bindings`
+              ; MCP tool but reachable from inside a query.
+```
+
+Unknown FINAL_VAR markers surface a clear error rather than passing the literal text through:
+
+```
+<<<FINAL>>>FINAL_VAR(_99)<<<END>>>
+→ "[FINAL_VAR error: unknown binding "_99". Available: _1, RESULTS]"
+```
+
+#### Resource Limits
+
+All optional. With none set, behavior is unchanged:
+
+```typescript
+runRLM(query, file, {
+  maxTimeoutMs: 30_000,    // wall-clock cap, propagates to children
+  maxTokens: 100_000,      // cumulative chars sent + received
+  maxErrors: 5,            // consecutive parse/execution errors
+  compactionThresholdChars: 50_000,  // summarize history when prompt grows past this
+})
+```
+
+When a limit hits, the run terminates cleanly with a string of the form:
+
+```
+[aborted: timeout 32100ms of 30000ms]
+
+Best partial answer:
+<the most recent meaningful solver result>
+```
+
+The partial answer is always preserved when present — completed work is never silently lost on abort.
+
 ### The Lattice Engine
 
 The Lattice engine (`src/logic/`) processes Nucleus commands:
@@ -150,7 +248,7 @@ npm run build
 
 ## Configuration
 
-Copy `config.example.json` to `config.json` and configure your LLM provider:
+Copy `config.example.json` to `~/.config/matryoshka/config.json`:
 
 ```json
 {
@@ -159,23 +257,44 @@ Copy `config.example.json` to `config.json` and configure your LLM provider:
   },
   "providers": {
     "ollama": {
-      "baseUrl": "http://localhost:11434",
+      "url": "http://localhost:11434/api/generate",
       "model": "qwen3-coder:30b",
       "options": { "temperature": 0.2, "num_ctx": 8192 }
     },
     "deepseek": {
-      "baseUrl": "https://api.deepseek.com",
+      "url": "https://api.deepseek.com/chat/completions",
       "apiKey": "${DEEPSEEK_API_KEY}",
       "model": "deepseek-chat",
       "options": { "temperature": 0.2 }
+    },
+    "glm": {
+      "url": "https://open.bigmodel.cn/api/paas/v4/chat/completions",
+      "apiKey": "${ZHIPU_API_KEY}",
+      "model": "glm-4-plus",
+      "options": { "temperature": 0.2 }
     }
   },
   "rlm": {
     "maxTurns": 10
+  },
+  "grammars": {
+    "ocaml": {
+      "package": "tree-sitter-ocaml",
+      "extensions": [".ml", ".mli"],
+      "moduleExport": "ocaml",
+      "symbols": {
+        "value_definition": "function",
+        "type_definition": "type",
+        "module_definition": "module"
+      }
+    }
   }
 }
 ```
 
+- **`llm` / `providers` / `rlm`** — LLM provider selection and RLM tuning (shown above with example providers). Each provider takes a full `url` (the complete API endpoint), an optional `apiKey` (supports `${ENV_VAR}` interpolation), a `model` name, and `options`.
+- **`grammars`** — custom tree-sitter language mappings for symbol extraction (see [Adding Language Support](#adding-language-support) for the full list of built-in languages). Use the [tree-sitter playground](https://tree-sitter.github.io/tree-sitter/playground) to explore node types for your language.
+
 ## Usage
 
 ### CLI
@@ -344,7 +463,7 @@ import { runRLM } from "matryoshka-rlm/rlm";
 import { createLLMClient } from "matryoshka-rlm";
 
 const llmClient = createLLMClient("ollama", {
-  baseUrl: "http://localhost:11434",
+  url: "http://localhost:11434/api/generate",
   model: "qwen3-coder:30b",
   options: { temperature: 0.2 }
 });
@@ -464,26 +583,7 @@ Once a package is installed, the language is automatically available for symbol
 
 #### Custom Language Configuration
 
-For languages without built-in mappings, create `~/.matryoshka/config.json` mapping tree-sitter node types to symbol kinds (`function`, `method`, `class`, `interface`, `type`, `struct`, `enum`, `trait`, `module`, `variable`, `constant`, `property`):
-
-```json
-{
-  "grammars": {
-    "ocaml": {
-      "package": "tree-sitter-ocaml",
-      "extensions": [".ml", ".mli"],
-      "moduleExport": "ocaml",
-      "symbols": {
-        "value_definition": "function",
-        "type_definition": "type",
-        "module_definition": "module"
-      }
-    }
-  }
-}
-```
-
-Use the [tree-sitter playground](https://tree-sitter.github.io/tree-sitter/playground) to explore node types for your language.
+For languages without built-in mappings, add a `grammars` entry to your config — see the [Configuration](#configuration) section for the full example and details.
 
 ### Control Flow
 

package/config.example.json

@@ -4,7 +4,7 @@
   },
   "providers": {
     "ollama": {
-      "baseUrl": "http://localhost:11434",
+      "url": "http://localhost:11434/api/generate",
       "model": "qwen3-coder:30b",
       "options": {
         "temperature": 0.2,
@@ -12,12 +12,20 @@
       }
     },
     "deepseek": {
-      "baseUrl": "https://api.deepseek.com",
+      "url": "https://api.deepseek.com/chat/completions",
       "apiKey": "${DEEPSEEK_API_KEY}",
       "model": "deepseek-chat",
       "options": {
         "temperature": 0.2
       }
+    },
+    "glm": {
+      "url": "https://open.bigmodel.cn/api/paas/v4/chat/completions",
+      "apiKey": "${ZHIPU_API_KEY}",
+      "model": "glm-4-plus",
+      "options": {
+        "temperature": 0.2
+      }
     }
   },
   "rlm": {

package/dist/adapters/nucleus.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"nucleus.d.ts","sourceRoot":"","sources":["../../src/adapters/nucleus.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,OAAO,KAAK,EAAE,YAAY,EAAY,MAAM,YAAY,CAAC;AA6bzD;;GAEG;AACH,wBAAgB,oBAAoB,IAAI,YAAY,CAWnD"}
+{"version":3,"file":"nucleus.d.ts","sourceRoot":"","sources":["../../src/adapters/nucleus.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,OAAO,KAAK,EAAE,YAAY,EAAY,MAAM,YAAY,CAAC;AAkdzD;;GAEG;AACH,wBAAgB,oBAAoB,IAAI,YAAY,CAWnD"}

package/dist/adapters/nucleus.js

@@ -18,56 +18,50 @@ function buildSystemPrompt(contextLength, toolInterfaces, hints) {
     if (!Number.isFinite(contextLength) || contextLength < 0)
         contextLength = 0;
     const sizeCategory = contextLength < 2000 ? "SMALL" : "LARGE";
-    return `Analyze document. ONE command per turn.
+    return `ONE command per turn.
 
 SEARCH:
-(grep "pattern")              → matching lines w/ line numbers
-(lines START END)             → get line range (1-indexed)
+(grep "pat")              → matched lines + lineNums
+(lines START END)         → line range, 1-indexed
 
-CHUNK (slice document before mapping over it — for too-large docs):
-(chunk_by_size N)             → N-char slices
-(chunk_by_lines N)            → N-line slices
-(chunk_by_regex "pat")        → slices split on regex (e.g. "\\n\\n")
-  — feed to (map … (lambda c (llm_query "summarize: {chunk}" (chunk c))))
-    to fire a sub-LLM per chunk of a document too big for the root window
+CHUNK (slice big doc for map):
+(chunk_by_size N)         → N-char slices
+(chunk_by_lines N)        → N-line slices
+(chunk_by_regex "pat")    → split on regex
+  use w/ (map … (lambda c (llm_query "..." (chunk c))))
 
 TRANSFORM:
 (filter RESULTS (lambda x (match x "pat" 0)))
 (map RESULTS (lambda x (match x "pat" 1)))
 (count RESULTS)   (sum RESULTS)
 
-SUB-LLM (semantic work on what grep/filter can't express):
-(llm_query "Summarize the data below: {items}" (items RESULTS))
-  — one sub-LLM call over the whole binding
-(map RESULTS (lambda x (llm_query "classify: {item}" (item x))))
-  — one sub-LLM call PER ITEM, returns an array of strings
-(filter RESULTS (lambda x (match (llm_query "keep?: {item}" (item x)) "keep" 0)))
-  — semantic predicate, keep items whose sub-LLM response matches
+SUB-LLM (work grep can't do):
+(llm_query "...{items}" (items RESULTS))   → one call over binding
+(map RESULTS (lambda x (llm_query "..." (item x))))   → per-item
+(filter RESULTS (lambda x (match (llm_query "..." (item x)) "keep" 0)))
 Rules:
-  — prompt is a literal string with {name} placeholders
-  — each (name TERM) fills one placeholder with TERM's evaluated value
-  — use for open-ended semantic tasks (classification, summarization,
-    paraphrase) that don't reduce to regex patterns
+  prompt literal w/ {name} placeholders
+  each (name TERM) fills one placeholder
+  use for classify/summarize/paraphrase, not regex
 
-CODE (when analyzing code):
+CODE:
 (list_symbols)  (list_symbols "function")
 (get_symbol_body "name")  (find_references "name")
- (callers "name")  (callees "name")
- (ancestors "Class")  (descendants "Class")
- (implementations "IFace")  (dependents "name")
- (symbol_graph "name" depth)
- (communities)  (community_of "name")
- (god_nodes)  (god_nodes 5)
- (surprising_connections)  (bridge_nodes)
- (suggest_questions)  (graph_report)
+(callers "name")  (callees "name")
+(ancestors "Class")  (descendants "Class")
+(implementations "IFace")  (dependents "name")
+(symbol_graph "name" depth)
+(communities)  (community_of "name")
+(god_nodes)  (god_nodes 5)
+(surprising_connections)  (bridge_nodes)
+(suggest_questions)  (graph_report)
 
-MULTI-LINE: grep keyword → get lineNum → (lines N M)
-QUERY MAP: count→count, total/sum→sum, list→grep+FINAL
+MULTI-LINE: grep keyword → lineNum → (lines N M)
+QUERY: count→count, sum/total→sum, list→grep+FINAL
 ANSWER: <<<FINAL>>>answer<<<END>>>
-  — for large answers, use FINAL_VAR(name) to reference a binding:
-    <<<FINAL>>>FINAL_VAR(_2)<<<END>>>      — substitutes _2's full value
-    <<<FINAL>>>The matches: FINAL_VAR(RESULTS)<<<END>>>
-  — use this when inlining a large result would blow the context window
+  big answer: FINAL_VAR(name) refs binding
+    <<<FINAL>>>FINAL_VAR(_2)<<<END>>>
+    <<<FINAL>>>matches: FINAL_VAR(RESULTS)<<<END>>>
 
 ${hints?.hintsText || ""}${hints?.selfCorrectionText || ""}`;
 }
@@ -210,7 +204,31 @@ function extractCode(response) {
     }
     // Check for plain S-expression in raw text
     // Find opening paren and balance to closing
-    const KNOWN_COMMANDS = ["grep", "filter", "map", "reduce", "count", "sum", "lines", "fuzzy_search", "bm25", "semantic", "fuse", "dampen", "rerank", "text_stats", "match", "replace", "split", "parseInt", "parseFloat", "parseDate", "parseCurrency", "parseNumber", "coerce", "extract", "synthesize", "lambda", "if", "classify", "predicate", "define-fn", "apply-fn", "list_symbols", "get_symbol_body", "find_references", "callers", "callees", "ancestors", "descendants", "implementations", "dependents", "symbol_graph", "communities", "community_of", "god_nodes", "surprising_connections", "bridge_nodes", "suggest_questions", "graph_report", "llm_query", "chunk_by_size", "chunk_by_lines", "chunk_by_regex"];
+    const KNOWN_COMMANDS = [
+        // Search / retrieval
+        "grep", "fuzzy_search", "bm25", "semantic", "fuse", "dampen", "rerank",
+        "text_stats", "lines",
+        // Collection ops
+        "filter", "map", "reduce", "count", "sum",
+        // String / numeric ops
+        "match", "replace", "split", "parseInt", "parseFloat", "parseDate",
+        "parseCurrency", "parseNumber", "coerce",
+        // Synthesis / lambda
+        "extract", "synthesize", "lambda", "if", "classify", "predicate",
+        "define-fn", "apply-fn",
+        // Symbol / graph ops
+        "list_symbols", "get_symbol_body", "find_references", "callers", "callees",
+        "ancestors", "descendants", "implementations", "dependents",
+        "symbol_graph", "communities", "community_of", "god_nodes",
+        "surprising_connections", "bridge_nodes", "suggest_questions",
+        "graph_report",
+        // Sub-LLM / recursive
+        "llm_query", "llm_batch", "rlm_query", "rlm_batch",
+        // Context + introspection
+        "context", "show_vars",
+        // Chunking
+        "chunk_by_size", "chunk_by_lines", "chunk_by_regex",
+    ];
     const MAX_SEXP_ITERATIONS = 200;
     let sexpIterations = 0;
     let searchFrom = firstParen;
@@ -254,7 +272,13 @@ function extractCode(response) {
             const expr = response.slice(parenIdx, end);
             // Check the expression starts with a known command
             const exprContent = expr.slice(1).trim(); // remove leading (
-            const firstWord = exprContent.match(/^(\S+)/)?.[1];
+            // Match identifier characters only — terms like `(show_vars)`
+            // (no args) leave a `)` immediately after the head word, so a
+            // greedy `\S+` would capture "show_vars)" and miss the
+            // KNOWN_COMMANDS lookup. Constraining to identifier chars
+            // stops at the closing paren, the leading whitespace, or any
+            // non-identifier character.
+            const firstWord = exprContent.match(/^([A-Za-z_][A-Za-z0-9_-]*)/)?.[1];
             if (firstWord && KNOWN_COMMANDS.includes(firstWord)) {
                 return expr;
             }
@@ -377,14 +401,14 @@ function extractFinalAnswer(response) {
  * Feedback when no LC term found
  */
 function getNoCodeFeedback() {
-    return `Parse error: no valid command. Extract a keyword from the query and search:
+    return `No command. Extract keyword from query:
 
-(grep "KEYWORD")   <- extract keyword from query, e.g., "SALES", "ERROR", "stage"
+(grep "KEYWORD")   ← e.g., "ERROR", "SALES", "stage"
 
-Then based on query type:
-- "list/show/what": output items directly <<<FINAL>>>item1, item2<<<END>>>
-- "how many/count": (count RESULTS)
-- "total/sum": (sum RESULTS)
+Then by query type:
+list/show/what → <<<FINAL>>>item1, item2<<<END>>>
+count → (count RESULTS)
+total/sum → (sum RESULTS)
 
 Next:`;
 }
@@ -410,27 +434,25 @@ function getErrorFeedback(error, code) {
 function getSuccessFeedback(resultCount, previousCount, query) {
     const safeQuery = (query || "the query").slice(0, 200);
     if (resultCount === 0 && previousCount && previousCount > 0) {
-        return `Filter matched nothing. Try different pattern.
+        return `Filter matched 0. Try different pattern.
 
 Next:`;
     }
     if (resultCount === 0) {
-        return `No matches. Try different search terms.
+        return `No matches. Try different terms.
 
 Next:`;
     }
     if (resultCount && resultCount > 0) {
-        return `Found ${resultCount} matches.
-
-Check: Do these results answer "${safeQuery}"?
-- For "list/show/what": output the items directly <<<FINAL>>>item1, item2...<<<END>>>
-- For "how many/count": (count RESULTS)
-- For "total/sum": (sum RESULTS)
-- If too broad: (filter RESULTS (lambda x (match x "specific_term" 0)))
+        return `Found ${resultCount} matches. Answer "${safeQuery}"?
+list/show/what → <<<FINAL>>>item1, item2<<<END>>>
+count → (count RESULTS)
+total/sum → (sum RESULTS)
+too broad → (filter RESULTS (lambda x (match x "term" 0)))
 
 Next:`;
     }
-    return `Done. Output your answer.
+    return `Done. Output answer.
 
 Next:`;
 }
@@ -439,12 +461,11 @@ Next:`;
  */
 function getRepeatedCodeFeedback(resultCount) {
     if (resultCount === 0) {
-        return `Already tried. Use different keyword.
+        return `Already tried. Try different keyword.
 
 Next:`;
     }
     return `Already done. RESULTS has ${resultCount ?? "your"} data.
-
 Output: (sum RESULTS) or <<<FINAL>>>answer<<<END>>>
 
 Next:`;

package/dist/adapters/nucleus.js.map

@@ -1 +1 @@
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package/dist/config/grammar-config.d.ts

@@ -1,55 +1,14 @@
 /**
- * Grammar configuration loader
+ * Grammar configuration helpers
  *
- * Loads grammar configurations from ~/.matryoshka/config.json
+ * Reads grammar configurations from the unified config file
  * and merges with built-in grammars.
  */
-import type { SymbolKind } from "../treesitter/types.js";
-/**
- * Grammar configuration for a language
- */
-export interface GrammarConfig {
-    /** npm package name (e.g., "tree-sitter-rust") */
-    package: string;
-    /** File extensions (e.g., [".rs"]) */
-    extensions: string[];
-    /** Map of AST node types to symbol kinds */
-    symbols: Record<string, SymbolKind>;
-    /** Optional: how to extract the grammar from the module */
-    moduleExport?: string;
-}
-/**
- * Full configuration file structure
- */
-export interface MatryoshkaConfig {
-    /** Custom grammar configurations */
-    grammars?: Record<string, GrammarConfig>;
-}
-/**
- * Default config directory and file paths
- */
-export declare const CONFIG_DIR: string;
-export declare const CONFIG_FILE: string;
-export declare function loadConfig(): MatryoshkaConfig;
-/**
- * Ensure config directory exists
- */
-export declare function ensureConfigDir(): void;
-/**
- * Save configuration to ~/.matryoshka/config.json
- */
-export declare function saveConfig(config: MatryoshkaConfig): void;
-/**
- * Get custom grammars from config
- */
-export declare function getCustomGrammars(): Record<string, GrammarConfig>;
-export declare function addCustomGrammar(language: string, grammar: GrammarConfig): void;
-/**
- * Remove a custom grammar from config
- */
-export declare function removeCustomGrammar(language: string): boolean;
-/**
- * Example config for reference
- */
-export declare const EXAMPLE_CONFIG: MatryoshkaConfig;
+import { type Config, type GrammarConfig } from "../config.js";
+export type { GrammarConfig } from "../config.js";
+export { CONFIG_DIR, CONFIG_FILE } from "./paths.js";
+export declare function getCustomGrammars(): Promise<Record<string, GrammarConfig>>;
+export declare function addCustomGrammar(language: string, grammar: GrammarConfig): Promise<void>;
+export declare function removeCustomGrammar(language: string): Promise<boolean>;
+export declare const EXAMPLE_CONFIG: Config;
 //# sourceMappingURL=grammar-config.d.ts.map

package/dist/config/grammar-config.d.ts.map

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