marcattacks 2.5.1 → 2.7.0

package/README.md

@@ -57,6 +57,40 @@ Transform the MARC input using a [JSONata](https://docs.jsonata.org/overview.htm
 marcattacks --param fix=./demo/demo.jsonata ./data/sample.xml
 ```
 
+Or transform using a [Catmandu](https://github.com/LibreCat/Catmandu) **Fix** script — a declarative,
+line-based mapping language built for library metadata (and faster than JSONata):
+
+```
+marcattacks --to jsonl --map fix --param fix=./demo/marc2rdf.fix ./data/sample.xml
+```
+
+A Fix script is a list of `name(args)` statements, with `if/unless ... end`
+conditionals and `do ... end` binds:
+
+```
+marc_map('245ab', title, join: ' ')    # copy MARC 245$a$b into title
+upcase(title)                          # uppercase it
+add_field(type, Book)                  # add a constant field
+lookup(type, ./types.csv)              # map a value through a CSV table
+do marc_each()                         # loop over each MARC field
+  unless marc_match('500e', skip)
+    marc_map('500', note.$append)
+  end
+end
+remove_field(record)
+```
+
+See `./demo/marc2rdf.fix` and `./demo/example.fix` for complete examples.
+
+The `types.csv` is a two column lookup list in CSV format. E.g.
+
+```
+A,B
+Book,http://example.org/ns#Book
+```
+
+The `fix` mapper implements a subset of the most common Catmandu Fix builtins created by the [LibreCat project](https://librecat.org). A full reference for the Fix language can be found here:  https://librecat.org/assets/catmandu_cheat_sheet.pdf.
+
 ## Stdin
 
 Use a pseudo URL `stdin://` to read from the standard input
@@ -101,25 +135,43 @@ use `s3s://...` for using an SSL layer.
 - csv
 - tsv
 - xml (MARCXML)
+- fastxml (optimized parser for MARCXML)
 
 ### Output (--to)
 
 - alephseq (Aleph sequential)
+- csv
+  - opts:
+    - header: string
+    - delimiter: string
 - json
 - jsonl
+- multipart 
+  - opts: 
+    - header: string
+    - delimited: string
+    - noEndDelimited: true | false
+- null (output nothing, for benchmarking)
 - parquet
+  - opts:
+    - schema: string (path)
 - rdf
 - csv
 - tsv
+  - opts:
+    - header: string
+    - delimiter: string
 - xml (MARCXML)
 
 ### Transform (--map)
 
 - avram : A mapper from MARC to [Avram](https://format.gbv.de/schema/avram/specification) 
+- fix : A [Catmandu](https://librecat.org/) Fix-language mapper (`--param fix=<file>`). See `./demo/marc2rdf.fix`
 - jsonata : A jsonata fixer (_default_)
-- marcids : A mapper from MARC to a list of record ids
 - marc2rdf : A mapper from MARC to RDF (demonstrator)
-
+- marcids : A mapper from MARC to a list of record ids
+- marcinrdf : A naive mapper from MARC into RDF producing a list of lists (demonstrator)
+   
 Or, provide your own transformers using JavaScript plugins. See: ./plugin/demo.js for an example.
 
 ### Param (--param)
@@ -130,6 +182,34 @@ Provide a params to the mapper, input and output. See examples:
 - `npm run demo:n3`
 - `npm run biblio:one`
 
+### Parallelism (--workers)
+
+`--workers <n>` runs the map stage (`--map`) on `<n>` worker threads while the
+main thread handles I/O, parsing and serialization. Output order is preserved.
+Default is `1` (no workers; the normal pipeline).
+
+It only helps when **the map is the bottleneck** — i.e. a heavy, interpreted
+[JSONata](https://docs.jsonata.org/) transform (`--param fix=...jsonata`). There
+it scales to roughly 1.8× (capped by main-thread coordination, not the map).
+
+It does **not** help — and is usually a little slower — when the map is cheap,
+because the per-record cost of shipping records to/from threads then outweighs
+the work. In particular:
+
+- The **Fix** mapper (`--map fix`) is compiled and runs at ~100k+ rec/s, so it
+  is almost never the bottleneck. Do not use `--workers` with it.
+- Plain conversions with no real map (default identity) gain nothing.
+
+For those cases the bottleneck is the reader/writer, not the map. The biggest
+lever is the input reader: prefer **`--from fastxml`** over the default sax
+`xml` reader (roughly 2× on MARCXML). For example, instead of `--workers`:
+
+```
+marcattacks --from fastxml --to jsonl --map fix --param fix=./demo/marc2rdf.fix input.xml.gz
+```
+
+Rule of thumb: **heavy jsonata → `--workers`; everything else → `--from fastxml`.**
+
 ### Writable (--out)
 
 - _default_: stdout

package/dist/attacker.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"attacker.d.ts","sourceRoot":"","sources":["../src/attacker.ts"],"names":[],"mappings":"AAKA,OAAO,EAAE,QAAQ,EAAE,MAAM,QAAQ,CAAC;AAClC,OAAO,EAAE,KAAK,SAAS,EAAE,KAAK,QAAQ,EAAE,MAAM,aAAa,CAAC;AAgB5D,qBAAa,aAAc,SAAQ,KAAK;IACpC,SAAgB,UAAU,EAAE,MAAM,CAAC;gBAEvB,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM;CAUlD;AAED,wBAAsB,qBAAqB,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC;IAAE,MAAM,EAAE,QAAQ,CAAC;IAAC,WAAW,EAAE,GAAG,CAAA;CAAE,CAAC,CA4ChH;AAED,wBAAsB,wBAAwB,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE;IAAE,CAAC,CAAC,EAAE,OAAO,CAAA;CAAE,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAKzG;AAED,wBAAsB,gBAAgB,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE;IAAE,GAAG,CAAC,EAAE,OAAO,CAAA;CAAE,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAKnG;AAED,wBAAsB,yBAAyB,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE;IAAC,IAAI,EAAE,MAAM,CAAC;IAAC,KAAK,CAAC,EAAE,GAAG,CAAA;CAAC,GAAG,OAAO,CAAC,SAAS,CAAC,CAQ/G;AAED,wBAAsB,oBAAoB,CAAC,IAAI,EAAE;IAAC,KAAK,CAAC,EAAE,MAAM,CAAC;IAAC,IAAI,CAAC,EAAE,MAAM,CAAA;CAAC,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAK3G;AAED,wBAAsB,uBAAuB,CAAC,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAMlF;AAED,wBAAsB,uBAAuB,CAAC,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,QAAQ,CAAC,CAqD1E;AAED,wBAAsB,0BAA0B,CAAC,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAMrF;AAED,wBAAsB,MAAM,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,MAAM,CAAC,CAgEjE"}
+{"version":3,"file":"attacker.d.ts","sourceRoot":"","sources":["../src/attacker.ts"],"names":[],"mappings":"AAKA,OAAO,EAAE,QAAQ,EAAE,MAAM,QAAQ,CAAC;AAClC,OAAO,EAAE,KAAK,SAAS,EAAE,KAAK,QAAQ,EAAE,MAAM,aAAa,CAAC;AAiB5D,qBAAa,aAAc,SAAQ,KAAK;IACpC,SAAgB,UAAU,EAAE,MAAM,CAAC;gBAEvB,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM;CAUlD;AAED,wBAAsB,qBAAqB,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC;IAAE,MAAM,EAAE,QAAQ,CAAC;IAAC,WAAW,EAAE,GAAG,CAAA;CAAE,CAAC,CA4ChH;AAED,wBAAsB,wBAAwB,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE;IAAE,CAAC,CAAC,EAAE,OAAO,CAAA;CAAE,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAKzG;AAED,wBAAsB,gBAAgB,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE;IAAE,GAAG,CAAC,EAAE,OAAO,CAAA;CAAE,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAKnG;AAED,wBAAsB,yBAAyB,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE;IAAC,IAAI,EAAE,MAAM,CAAC;IAAC,KAAK,CAAC,EAAE,GAAG,CAAA;CAAC,GAAG,OAAO,CAAC,SAAS,CAAC,CAQ/G;AAED,wBAAsB,oBAAoB,CAAC,IAAI,EAAE;IAAC,KAAK,CAAC,EAAE,MAAM,CAAC;IAAC,IAAI,CAAC,EAAE,MAAM,CAAA;CAAC,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAK3G;AAED,wBAAsB,uBAAuB,CAAC,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAelF;AAED,wBAAsB,uBAAuB,CAAC,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,QAAQ,CAAC,CAqD1E;AAED,wBAAsB,0BAA0B,CAAC,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,SAAS,GAAG,IAAI,CAAC,CAMrF;AAED,wBAAsB,MAAM,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,MAAM,CAAC,CAgEjE"}

package/dist/attacker.js

@@ -11,6 +11,7 @@ import { s3LatestObject, s3ReadStream, s3WriteStream } from './stream/s3stream.j
 import { pipeline } from 'node:stream/promises';
 import { createCountableSkippedStream, createUntarredStream, createUncompressedStream, createVerboseStream, getCleanURL } from './util/stream_helpers.js';
 import { fileLatestFile, fileReadStream } from './stream/filestream.js';
+import { createWorkerPool } from './stream/worker-pool.js';
 const logger = log4js.getLogger();
 export class PipelineError extends Error {
     statusCode;
@@ -89,6 +90,15 @@ export async function createCountSkipStage(opts) {
 export async function createMapTransformStage(opts) {
     if (opts.map) {
         const mod = await loadPlugin(opts.map, 'transform');
+        const workers = parseInt(opts.workers ?? '1', 10) || 1;
+        // Run the map across worker threads when requested and supported. A map
+        // is parallelizable iff it exposes a pure per-record createMapper().
+        if (workers > 1) {
+            if (typeof mod.createMapper === 'function') {
+                return createWorkerPool({ map: opts.map, param: opts.param, workers });
+            }
+            logger.warn(`--workers ${workers} ignored: map '${opts.map}' is not parallelizable`);
+        }
         return await mod.transform(opts.param, { utils: marcUtils });
     }
     return null;

package/dist/attacker.js.map

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package/dist/command.js

@@ -22,6 +22,7 @@ program.version(pkg.version)
     .option('--tar', 'untar input')
     .option('--count <num>', 'output only <num> records')
     .option('--skip <num>', 'skip first <num> records')
+    .option('--workers <num>', 'run the map on <num> worker threads (helps heavy jsonata maps only; for cheap/fix maps use --from fastxml instead)', '1')
     .option('--key <keyfile>', 'private key file')
     .option('--key-env <env>', 'private key environment variable')
     .option('--log <format>', 'logging format')

package/dist/command.js.map

@@ -1 +1 @@
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package/dist/fix/binds.d.ts

@@ -0,0 +1,5 @@
+type Data = any;
+type Runner = (data: Data) => Data;
+export declare function buildBind(name: string, args: string[], body: Runner, doset: boolean): Runner;
+export {};
+//# sourceMappingURL=binds.d.ts.map

package/dist/fix/binds.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"binds.d.ts","sourceRoot":"","sources":["../../src/fix/binds.ts"],"names":[],"mappings":"AAWA,KAAK,IAAI,GAAG,GAAG,CAAC;AAChB,KAAK,MAAM,GAAG,CAAC,IAAI,EAAE,IAAI,KAAK,IAAI,CAAC;AAenC,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,EAAE,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,OAAO,GAAG,MAAM,CAsD5F"}

package/dist/fix/binds.js

@@ -0,0 +1,82 @@
+// Catmandu Fix binds: the `do BIND(...) ... end` construct that wraps a block
+// of fixes and controls how they are applied. A subset — `list` (the common
+// one, for iterating an array) and `identity`.
+//
+// Bind contract (see Catmandu::Fix::Bind): unit(data) seeds the bound value,
+// then the wrapped block is applied to it. `do` returns the original record;
+// `doset` returns the bound result.
+import { Path, isHash, isArray } from './path.js';
+import { REJECT } from './signal.js';
+// structured field hash for marc_each's `var` (tag/ind1/ind2/subfields)
+function fieldToHash(row) {
+    const subfields = [];
+    for (let i = 3; i < row.length; i += 2)
+        subfields.push({ [row[i]]: row[i + 1] });
+    return { tag: row[0], ind1: row[1], ind2: row[2], subfields };
+}
+function parseOpts(args) {
+    const o = {};
+    for (let i = 0; i < args.length; i += 2)
+        if (args[i] !== undefined)
+            o[args[i]] = args[i + 1] ?? '';
+    return o;
+}
+export function buildBind(name, args, body, doset) {
+    const opts = parseOpts(args);
+    if (name === 'list') {
+        const pathGet = opts.path !== undefined ? new Path(opts.path).getter() : undefined;
+        const varName = opts.var;
+        return (data) => {
+            const root = data;
+            const mvar = pathGet ? pathGet(data)[0] : data;
+            let result = mvar;
+            if (isHash(mvar)) {
+                result = body(mvar);
+            }
+            else if (isArray(mvar)) {
+                for (let i = 0; i < mvar.length; i++) {
+                    if (varName !== undefined) {
+                        root[varName] = mvar[i];
+                        body(root);
+                        delete root[varName];
+                    }
+                    else {
+                        mvar[i] = body(mvar[i]);
+                    }
+                }
+                result = mvar;
+            }
+            else {
+                result = []; // zero
+            }
+            return doset ? result : root;
+        };
+    }
+    // marc_each: iterate each MARC field; run the block on a record holding
+    // just that field; accumulate the resulting fields. reject() drops a field.
+    if (name === 'marc_each') {
+        const varName = opts.var;
+        return (data) => {
+            const rows = (data && isArray(data.record)) ? data.record : [];
+            const out = [];
+            for (const row of rows) {
+                data.record = [row];
+                if (varName !== undefined)
+                    data[varName] = fieldToHash(row);
+                const fixed = body(data);
+                if (fixed !== REJECT && fixed && isArray(fixed.record))
+                    out.push(...fixed.record);
+                if (varName !== undefined)
+                    delete data[varName];
+            }
+            data.record = out;
+            return data;
+        };
+    }
+    // identity (and any unknown bind): just run the block on the record
+    return (data) => {
+        const r = body(data);
+        return doset ? r : data;
+    };
+}
+//# sourceMappingURL=binds.js.map

package/dist/fix/binds.js.map

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package/dist/fix/conditions.d.ts

@@ -0,0 +1,5 @@
+type Data = any;
+type Cond = (data: Data) => boolean;
+export declare function buildCondition(name: string, args: string[]): Cond;
+export {};
+//# sourceMappingURL=conditions.d.ts.map

package/dist/fix/conditions.d.ts.map

@@ -0,0 +1 @@
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package/dist/fix/conditions.js

@@ -0,0 +1,111 @@
+// Catmandu Fix conditions, used by if/unless blocks. Each returns a predicate
+// over the record. (A subset — the common ones.)
+import { Path } from './path.js';
+// subfield values addressed by a MARC path (tag + subcodes; tag may be ***)
+function marcValues(data, mp) {
+    const rec = data?.record;
+    if (!Array.isArray(rec))
+        return [];
+    const tag = mp.slice(0, 3);
+    const subs = mp.slice(3).replace(/\$/g, '');
+    const out = [];
+    for (const row of rec) {
+        if (tag !== '***' && row[0] !== tag)
+            continue;
+        for (let i = 3; i < row.length; i += 2) {
+            if (subs === '' || subs.includes(row[i]))
+                out.push(row[i + 1]);
+        }
+    }
+    return out;
+}
+// >=1 value present and ALL pass the test (Catmandu Builder::Simple all_u)
+function all(getter, test) {
+    return (d) => { const v = getter(d); return v.length > 0 && v.every(test); };
+}
+export function buildCondition(name, args) {
+    const path = args[0] !== undefined ? new Path(args[0]).getter() : () => [];
+    const arg = args[1];
+    switch (name) {
+        case 'exists':
+            return (d) => path(d).length > 0;
+        case 'all_match': {
+            const re = new RegExp(arg);
+            return (d) => { const v = path(d); return v.length > 0 && v.every((x) => re.test(String(x))); };
+        }
+        case 'any_match': {
+            const re = new RegExp(arg);
+            return (d) => path(d).some((x) => re.test(String(x)));
+        }
+        case 'all_equal':
+            return (d) => { const v = path(d); return v.length > 0 && v.every((x) => String(x) === arg); };
+        case 'any_equal':
+            return (d) => path(d).some((x) => String(x) === arg);
+        case 'is_string':
+            return (d) => { const v = path(d); return v.length > 0 && v.every((x) => typeof x === 'string'); };
+        case 'is_array':
+            return (d) => { const v = path(d); return v.length > 0 && v.every((x) => Array.isArray(x)); };
+        // "Simple" conditions: true iff there is >=1 value and ALL values pass
+        // (matches Catmandu's Builder::Simple all_u semantics).
+        case 'is_number':
+            return all(path, (x) => typeof x === 'number' || (typeof x === 'string' && x.trim() !== '' && !isNaN(Number(x))));
+        case 'is_object':
+            return all(path, (x) => x !== null && typeof x === 'object' && !Array.isArray(x));
+        case 'is_null':
+            return all(path, (x) => x === null || x === undefined);
+        case 'greater_than': {
+            const n = parseInt(arg, 10);
+            return all(path, (x) => (typeof x === 'number' || typeof x === 'string') && Number(x) > n);
+        }
+        case 'less_than': {
+            const n = parseInt(arg, 10);
+            return all(path, (x) => (typeof x === 'number' || typeof x === 'string') && Number(x) < n);
+        }
+        case 'is_true':
+        case 'is_false': {
+            const strict = args.some((a, i) => a === 'strict' && (args[i + 1] === '1' || args[i + 1] === 'true'));
+            const want = name === 'is_true';
+            return all(path, (x) => strict
+                ? x === want
+                : (x === want || (typeof x === 'number' && x === (want ? 1 : 0)) || (typeof x === 'string' && x === (want ? 'true' : 'false'))));
+        }
+        case 'in': {
+            const get2 = new Path(args[1] ?? '').getter();
+            const inOne = (a, b) => {
+                if (a == null && b == null)
+                    return true;
+                if (a == null || b == null)
+                    return false;
+                if (Array.isArray(b))
+                    return b.some((x) => String(x) === String(a));
+                if (b !== null && typeof b === 'object')
+                    return String(a) in b;
+                return String(a) === String(b);
+            };
+            return (d) => {
+                const a = path(d);
+                const b = get2(d);
+                if (!a.length || !b.length || a.length !== b.length)
+                    return false;
+                for (let i = 0; i < a.length; i++)
+                    if (!inOne(a[i], b[i]))
+                        return false;
+                return true;
+            };
+        }
+        case 'marc_match':
+        case 'marc_any_match':
+            return (d) => marcValues(d, args[0]).some((v) => new RegExp(arg).test(String(v)));
+        case 'marc_all_match': {
+            const re = new RegExp(arg);
+            return (d) => { const v = marcValues(d, args[0]); return v.length > 0 && v.every((x) => re.test(String(x))); };
+        }
+        case 'marc_has':
+            return (d) => Array.isArray(d?.record) && d.record.some((row) => row[0] === args[0]);
+        case 'marc_has_many':
+            return (d) => Array.isArray(d?.record) && d.record.filter((row) => row[0] === args[0]).length > 1;
+        default:
+            throw new Error(`unknown condition: ${name}`);
+    }
+}
+//# sourceMappingURL=conditions.js.map

package/dist/fix/conditions.js.map

@@ -0,0 +1 @@
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package/dist/fix/fixes.d.ts

@@ -0,0 +1,7 @@
+type Data = any;
+type Fixer = (data: Data) => Data;
+type FixBuilder = (args: string[]) => Fixer;
+export declare const FIXES: Record<string, FixBuilder>;
+export declare function buildFix(name: string, args: string[]): Fixer;
+export {};
+//# sourceMappingURL=fixes.d.ts.map

package/dist/fix/fixes.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"fixes.d.ts","sourceRoot":"","sources":["../../src/fix/fixes.ts"],"names":[],"mappings":"AAYA,KAAK,IAAI,GAAG,GAAG,CAAC;AAChB,KAAK,KAAK,GAAG,CAAC,IAAI,EAAE,IAAI,KAAK,IAAI,CAAC;AAClC,KAAK,UAAU,GAAG,CAAC,IAAI,EAAE,MAAM,EAAE,KAAK,KAAK,CAAC;AAkB5C,eAAO,MAAM,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,UAAU,CA2X5C,CAAC;AA+BF,wBAAgB,QAAQ,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,KAAK,CAI5D"}