ma-agents 3.13.2 → 3.14.0

package/lib/.bmad-extension-plugin.build-22612-1782454014750/.claude-plugin/marketplace.json

@@ -1,109 +0,0 @@
-{
-  "name": "ma-agents",
-  "owner": {
-    "name": "Alon Mayaffit"
-  },
-  "description": "ma-agents BMAD extension — enterprise SDLC personas (Yael, Amit, Alex, Demerzel, Gad) plus MIL-STD-498, SRE, DevOps, Cyber, ML, and SQA workflow skills.",
-  "license": "MIT",
-  "homepage": "https://github.com/mayafit/AI_Agents",
-  "repository": "https://github.com/mayafit/AI_Agents",
-  "keywords": [
-    "bmad",
-    "ma-agents",
-    "enterprise",
-    "sdlc",
-    "mil-std-498",
-    "sre",
-    "devops",
-    "cyber",
-    "ml",
-    "sqa",
-    "claude-code",
-    "copilot",
-    "cline",
-    "roo-code",
-    "kilocode"
-  ],
-  "compatible_tools": [
-    "claude-code",
-    "copilot",
-    "cline",
-    "roo-code",
-    "kilocode"
-  ],
-  "bmad_min_version": "6.8.0",
-  "plugins": [
-    {
-      "name": "ma-skills",
-      "source": "./",
-      "description": "ma-agents extension module providing enterprise SDLC personas and operational workflow skills.",
-      "version": "3.13.2",
-      "author": {
-        "name": "Alon Mayaffit"
-      },
-      "skills": [
-        "./skills/ma-agent-cyber",
-        "./skills/ma-agent-devops",
-        "./skills/ma-agent-ml",
-        "./skills/ma-agent-sqa",
-        "./skills/ma-agent-sre",
-        "./skills/mil498-ocd",
-        "./skills/mil498-requirement-quality",
-        "./skills/mil498-sdd",
-        "./skills/mil498-sdp",
-        "./skills/mil498-srs",
-        "./skills/mil498-ssdd",
-        "./skills/mil498-sss",
-        "./skills/mil498-std",
-        "./skills/sqa-audit",
-        "./skills/sqa-ieee12207",
-        "./skills/sqa-requirements-quality",
-        "./skills/sre-check-deployment-status",
-        "./skills/sre-check-secrets",
-        "./skills/sre-check-system-status",
-        "./skills/sre-day-2-ops",
-        "./skills/sre-deployment-strategies",
-        "./skills/sre-fix-deployments",
-        "./skills/sre-gitops-status",
-        "./skills/devops-configure-infrastructure",
-        "./skills/devops-disconnected-deployment",
-        "./skills/devops-docker-compose-setup",
-        "./skills/devops-manage-helm",
-        "./skills/devops-sign-docker-image",
-        "./skills/cyber-generate-certs",
-        "./skills/cyber-immunity-estimation",
-        "./skills/cyber-security-audit",
-        "./skills/cyber-vault-secrets",
-        "./skills/cyber-verify-docker-users",
-        "./skills/cyber-verify-image-signature",
-        "./skills/cyber-vulnerability-scan",
-        "./skills/ml-advise",
-        "./skills/ml-analysis",
-        "./skills/ml-architecture",
-        "./skills/ml-detailed-design",
-        "./skills/ml-eda",
-        "./skills/ml-experiment",
-        "./skills/ml-hparam",
-        "./skills/ml-ideation",
-        "./skills/ml-infra",
-        "./skills/ml-retrospective",
-        "./skills/ml-revision",
-        "./skills/ml-techspec",
-        "./skills/add-sprint",
-        "./skills/add-to-sprint",
-        "./skills/bmad-dev-story",
-        "./skills/bmad-sprint-planning",
-        "./skills/bmad-sprint-status",
-        "./skills/cleanup-done",
-        "./skills/close-sprint",
-        "./skills/create-bug-story",
-        "./skills/generate-backlog",
-        "./skills/modify-sprint",
-        "./skills/prioritize-backlog",
-        "./skills/project-context-expansion",
-        "./skills/remove-from-sprint",
-        "./skills/sprint-status-view"
-      ]
-    }
-  ]
-}

package/lib/.bmad-extension-plugin.build-22612-1782454014750/skills/module-help.csv

@@ -1,62 +0,0 @@
-module,phase,name,code,sequence,workflow-file,command,required,agent,options,description,output-location,outputs,
-ma-skills,anytime,SRE Agent,ma-agent-sre,,skill:ma-agent-sre,ma-agent-sre,false,bmm-sre,,"Site Reliability Engineer agent for system availability, reliability, and Kubernetes operations.",output_folder,"agent customization",
-ma-skills,anytime,DevOps Agent,ma-agent-devops,,skill:ma-agent-devops,ma-agent-devops,false,bmm-devops,,"DevOps Engineer agent for CI/CD pipeline automation, Infrastructure as Code, and cloud-native technologies.",output_folder,"agent customization",
-ma-skills,anytime,Cyber Agent,ma-agent-cyber,,skill:ma-agent-cyber,ma-agent-cyber,false,bmm-cyber,,"Cyber Security Analyst agent for vulnerability assessment, threat modeling, and system hardening.",output_folder,"agent customization",
-ma-skills,anytime,ML Scientist Agent,ma-agent-ml,,skill:ma-agent-ml,ma-agent-ml,false,bmm-demerzel,,"Machine Learning Scientist agent for hypothesis-driven ML lifecycle with scientific rigor.",output_folder,"agent customization",
-ma-skills,anytime,SQA Agent,ma-agent-sqa,,skill:ma-agent-sqa,ma-agent-sqa,false,bmm-qa,,"Software Quality Assurance agent (Gad) for project auditing, compliance verification, and quality reporting.",output_folder,"agent customization",
-ma-skills,4-implementation,Generate SSS,mil498-sss,,skill:mil498-sss,bmad-mil-generate-sss,false,bmm-mil498,,"Generate a MIL-STD-498 System/Subsystem Specification (SSS).",output_folder,"MIL-498 document",
-ma-skills,4-implementation,Generate SSDD,mil498-ssdd,,skill:mil498-ssdd,bmad-mil-generate-ssdd,false,bmm-mil498,,"Generate a MIL-STD-498 System/Subsystem Design Description (SSDD).",output_folder,"MIL-498 document",
-ma-skills,4-implementation,Generate OCD,mil498-ocd,,skill:mil498-ocd,bmad-mil-generate-ocd,false,bmm-mil498,,"Generate a MIL-STD-498 Operational Concept Description (OCD).",output_folder,"MIL-498 document",
-ma-skills,4-implementation,Generate SDP,mil498-sdp,,skill:mil498-sdp,bmad-mil-generate-sdp,false,bmm-mil498,,"Generate a MIL-STD-498 Software Development Plan (SDP).",output_folder,"MIL-498 document",
-ma-skills,4-implementation,Generate SRS,mil498-srs,,skill:mil498-srs,bmad-mil-generate-srs,false,bmm-mil498,,"Generate a MIL-STD-498 Software Requirements Specification (SRS).",output_folder,"MIL-498 document",
-ma-skills,4-implementation,Generate SDD,mil498-sdd,,skill:mil498-sdd,bmad-mil-generate-sdd,false,bmm-mil498,,"Generate a MIL-STD-498 Software Design Description (SDD).",output_folder,"MIL-498 document",
-ma-skills,4-implementation,Generate STD,mil498-std,,skill:mil498-std,bmad-mil-generate-std,false,bmm-mil498,,"Generate a MIL-STD-498 Software Test Description (STD).",output_folder,"MIL-498 document",
-ma-skills,4-implementation,Requirements Quality,mil498-requirement-quality,,skill:mil498-requirement-quality,mil498-requirement-quality,false,bmm-mil498,,"Evaluate requirements against 14 quality criteria — produces per-requirement audit table, Missing Elements report, and Overall Quality Score.",output_folder,"requirements audit",
-ma-skills,4-implementation,Check Deployment Status,sre-check-deployment-status,,skill:sre-check-deployment-status,bmad-sre-check-deployment-status,false,bmm-sre,,"Check deployment status across Kubernetes namespaces and report issues.",output_folder,"status report",
-ma-skills,4-implementation,Check Secrets,sre-check-secrets,,skill:sre-check-secrets,bmad-sre-check-secrets,false,bmm-sre,,"Debug and verify secret configurations in Kubernetes clusters.",output_folder,"status report",
-ma-skills,4-implementation,Check System Status,sre-check-system-status,,skill:sre-check-system-status,bmad-sre-check-system-status,false,bmm-sre,,"Perform overall system status check across cluster resources.",output_folder,"status report",
-ma-skills,4-implementation,Day 2 Ops,sre-day-2-ops,,skill:sre-day-2-ops,bmad-sre-day-2-ops,false,bmm-sre,,"Execute Day 2 operations and maintenance tasks for running systems.",output_folder,"operations report",
-ma-skills,4-implementation,Deployment Strategies,sre-deployment-strategies,,skill:sre-deployment-strategies,bmad-sre-deployment-strategies,false,bmm-sre,,"Evaluate and recommend deployment strategies (blue-green, canary, rolling).",output_folder,"strategy report",
-ma-skills,4-implementation,Fix Deployments,sre-fix-deployments,,skill:sre-fix-deployments,bmad-sre-fix-deployments,false,bmm-sre,,"Troubleshoot and fix failed or degraded deployments.",output_folder,"fix report",
-ma-skills,4-implementation,GitOps Status,sre-gitops-status,,skill:sre-gitops-status,bmad-sre-gitops-status,false,bmm-sre,,"Check GitOps sync status and detect configuration drift.",output_folder,"status report",
-ma-skills,4-implementation,Configure Infrastructure,devops-configure-infrastructure,,skill:devops-configure-infrastructure,bmad-devops-configure-infrastructure,false,bmm-devops,,"Configure infrastructure components using Infrastructure as Code patterns.",output_folder,"infrastructure config",
-ma-skills,4-implementation,Disconnected Deployment,devops-disconnected-deployment,,skill:devops-disconnected-deployment,bmad-devops-disconnected-deployment,false,bmm-devops,,"Deploy to air-gapped or disconnected environments.",output_folder,"deployment guide",
-ma-skills,4-implementation,Docker Compose Setup,devops-docker-compose-setup,,skill:devops-docker-compose-setup,bmad-devops-docker-compose-setup,false,bmm-devops,,"Set up and manage Docker Compose configurations.",output_folder,"compose config",
-ma-skills,4-implementation,Manage Helm,devops-manage-helm,,skill:devops-manage-helm,bmad-devops-manage-helm,false,bmm-devops,,"Deploy and manage Helm charts for Kubernetes.",output_folder,"helm config",
-ma-skills,4-implementation,Sign Docker Image,devops-sign-docker-image,,skill:devops-sign-docker-image,bmad-devops-sign-docker-image,false,bmm-devops,,"Sign Docker images using Cosign/Notary for supply chain security.",output_folder,"signing report",
-ma-skills,4-implementation,Generate Certs,cyber-generate-certs,,skill:cyber-generate-certs,bmad-cyber-generate-certs,false,bmm-cyber,,"Generate secure self-signed certificates and Root CAs using OpenSSL.",output_folder,"certificates",
-ma-skills,4-implementation,Immunity Estimation,cyber-immunity-estimation,,skill:cyber-immunity-estimation,bmad-cyber-immunity-estimation,false,bmm-cyber,,"Estimate cyber immunity posture and resilience metrics.",output_folder,"immunity report",
-ma-skills,4-implementation,Security Audit,cyber-security-audit,,skill:cyber-security-audit,bmad-cyber-security-audit,false,bmm-cyber,,"Perform comprehensive security audit against industry standards.",output_folder,"audit report",
-ma-skills,4-implementation,Vault Secrets,cyber-vault-secrets,,skill:cyber-vault-secrets,bmad-cyber-vault-secrets,false,bmm-cyber,,"Manage HashiCorp Vault secret configurations and policies.",output_folder,"vault config",
-ma-skills,4-implementation,Verify Docker Users,cyber-verify-docker-users,,skill:cyber-verify-docker-users,bmad-cyber-verify-docker-users,false,bmm-cyber,,"Verify Docker image user configurations and hardening compliance.",output_folder,"verification report",
-ma-skills,4-implementation,Verify Image Signature,cyber-verify-image-signature,,skill:cyber-verify-image-signature,bmad-cyber-verify-image-signature,false,bmm-cyber,,"Verify Docker image signatures for supply chain integrity.",output_folder,"verification report",
-ma-skills,4-implementation,Vulnerability Scan,cyber-vulnerability-scan,,skill:cyber-vulnerability-scan,bmad-cyber-vulnerability-scan,false,bmm-cyber,,"Orchestrate vulnerability scanning across project components.",output_folder,"scan report",
-ma-skills,4-implementation,ML Ideation,ml-ideation,,skill:ml-ideation,ml-ideation,false,bmm-demerzel,,"Frame an ML research problem, produce a Research Thesis and PRD.",_bmad-output,"research thesis",
-ma-skills,4-implementation,ML EDA,ml-eda,,skill:ml-eda,ml-eda,false,bmm-demerzel,,"Exploratory Data Analysis — establish baselines and produce an EDA report.",_bmad-output,"EDA report",
-ma-skills,4-implementation,ML Architecture,ml-architecture,,skill:ml-architecture,ml-architecture,false,bmm-demerzel,,"Define model architecture, stack, and experiment tracking strategy.",_bmad-output,"architecture spec",
-ma-skills,4-implementation,ML Detailed Design,ml-detailed-design,,skill:ml-detailed-design,ml-detailed-design,false,bmm-demerzel,,"Break implementation into INF-* and EXP-* tasks.",_bmad-output,"task breakdown",
-ma-skills,4-implementation,ML TechSpec,ml-techspec,,skill:ml-techspec,ml-techspec,false,bmm-demerzel,,"Lock experiment parameters and performance tiers before training.",_bmad-output,"TechSpec",
-ma-skills,4-implementation,ML Infra,ml-infra,,skill:ml-infra,ml-infra,false,bmm-demerzel,,"Build ML infrastructure, manage dependencies, and run smoke tests.",_bmad-output,"infra report",
-ma-skills,4-implementation,ML Experiment,ml-experiment,,skill:ml-experiment,ml-experiment,false,bmm-demerzel,,"Execute training experiments against locked TechSpec and log metrics.",_bmad-output,"experiment log",
-ma-skills,4-implementation,ML Analysis,ml-analysis,,skill:ml-analysis,ml-analysis,false,bmm-demerzel,,"Evaluate experiment outcomes against TechSpec success tiers.",_bmad-output,"analysis report",
-ma-skills,4-implementation,ML Hyperparameter Optimization,ml-hparam,,skill:ml-hparam,ml-hparam,false,bmm-demerzel,,"Automated hyperparameter optimization (Optuna, W&B Sweeps, Ray Tune).",_bmad-output,"hparam report",
-ma-skills,4-implementation,ML Revision,ml-revision,,skill:ml-revision,ml-revision,false,bmm-demerzel,,"Amend hypothesis and requirements based on experiment findings.",_bmad-output,"revision doc",
-ma-skills,4-implementation,ML Advise,ml-advise,,skill:ml-advise,ml-advise,false,bmm-demerzel,,"Search past experiments, surface findings and failure warnings.",_bmad-output,"advisory report",
-ma-skills,4-implementation,ML Retrospective,ml-retrospective,,skill:ml-retrospective,ml-retrospective,false,bmm-demerzel,,"Capture session learnings and update project context.",_bmad-output,"retrospective",
-ma-skills,4-implementation,SQA Audit,sqa-audit,,skill:sqa-audit,sqa-audit,false,bmm-qa,,"Comprehensive project quality audit covering code-to-story traceability, story-to-architecture alignment, process compliance, sprint health, and release state.",_bmad-output,"audit report",
-ma-skills,4-implementation,IEEE 12207 Compliance,sqa-ieee12207,,skill:sqa-ieee12207,sqa-ieee12207,false,bmm-qa,,"Evaluate the project against IEEE/ISO/IEC 12207:2017 software lifecycle processes — produces a compliance matrix and gap analysis report.",_bmad-output,"compliance report",
-ma-skills,4-implementation,Create Bug Story,create-bug-story,,skill:create-bug-story,create-bug-story,false,bmm-dev,,"Create a structured bug story from a detected defect and add to backlog.",_bmad-output/implementation-artifacts,"bug story",
-ma-skills,4-implementation,Dev Story,bmad-dev-story,,skill:bmad-dev-story,bmad-dev-story,false,bmm-dev,,"Execute story implementation following a context filled story spec file.",_bmad-output/implementation-artifacts,"story implementation",
-ma-skills,4-implementation,Sprint Planning,bmad-sprint-planning,,skill:bmad-sprint-planning,bmad-sprint-planning,false,bmm-sm,,"Bootstrap or update the unified sprint-status.yaml from epics with three sections (epics, backlog, sprints).",_bmad-output/implementation-artifacts,"sprint plan",
-ma-skills,4-implementation,Generate Backlog,generate-backlog,,skill:generate-backlog,generate-backlog,false,bmm-sm,,"Generate or refresh the backlog section of sprint-status.yaml from epics and bug stories.",_bmad-output/implementation-artifacts,"backlog",
-ma-skills,4-implementation,Add Sprint,add-sprint,,skill:add-sprint,add-sprint,false,bmm-sm,,"Create a new sprint entry in the sprints section of sprint-status.yaml with capacity limits, optional ISO dates, and auto-incremented ID.",_bmad-output/implementation-artifacts,"sprint plan",
-ma-skills,4-implementation,Add to Sprint,add-to-sprint,,skill:add-to-sprint,add-to-sprint,false,bmm-sm,,"Move backlog items to a sprint in the unified sprint-status.yaml using movement semantics.",_bmad-output/implementation-artifacts,"sprint plan",
-ma-skills,4-implementation,Remove from Sprint,remove-from-sprint,,skill:remove-from-sprint,remove-from-sprint,false,bmm-sm,,"Move items from a sprint back to the backlog in the unified sprint-status.yaml using reverse movement semantics.",_bmad-output/implementation-artifacts,"sprint plan",
-ma-skills,4-implementation,Modify Sprint,modify-sprint,,skill:modify-sprint,modify-sprint,false,bmm-sm,,"Modify an existing sprint's metadata (name, capacity, dates, status) within the sprints section of sprint-status.yaml.",_bmad-output/implementation-artifacts,"sprint plan",
-ma-skills,4-implementation,Sprint Status View,sprint-status-view,,skill:sprint-status-view,sprint-status-view,false,bmm-sm,,"Display formatted sprint progress, backlog, and epic status from the unified sprint-status.yaml.",_bmad-output/implementation-artifacts,"status display",
-ma-skills,4-implementation,Sprint Status Health,bmad-sprint-status,,skill:bmad-sprint-status,bmad-sprint-status,false,bmm-sm,,"Analyze sprint health, surface risk flags, and recommend next actions from the unified sprint-status.yaml.",_bmad-output/implementation-artifacts,"health summary",
-ma-skills,4-implementation,Cleanup Done,cleanup-done,,skill:cleanup-done,cleanup-done,false,bmm-sm,,"Archive done and cancelled items — remove from sprint-status.yaml and move files to done/ subfolder.",_bmad-output/implementation-artifacts,"archival",
-ma-skills,4-implementation,Close Sprint,close-sprint,,skill:close-sprint,close-sprint,false,bmm-sm,,"Close an active sprint — archive done/cancelled items, disposition incomplete items, set sprint status to closed.",_bmad-output/implementation-artifacts,"sprint plan",
-ma-skills,4-implementation,Prioritize Backlog,prioritize-backlog,,skill:prioritize-backlog,prioritize-backlog,false,bmm-sm,,"Reprioritize backlog items using multiple criteria -- severity, business value, dependencies, type, age.",_bmad-output/implementation-artifacts,"backlog",
-ma-skills,4-implementation,Project Context Expansion,project-context-expansion,,skill:project-context-expansion,project-context-expansion,false,bmm-sm,,"Post-retrospective companion to update project-context.md with new rules.",_bmad-output,"project context",
-ma-skills,4-implementation,Requirements Quality Audit,sqa-requirements-quality,,skill:sqa-requirements-quality,sqa-requirements-quality,false,bmm-qa,,"Evaluate project requirements against 14 quality criteria — produces a per-requirement audit table, missing-elements section, and overall quality score.",_bmad-output,"quality report",

package/lib/.bmad-extension-plugin.build-22612-1782454014750/skills/module.yaml

@@ -1,20 +0,0 @@
-# ma-skills module manifest (BMAD v6.6.0 schema)
-#
-# Canonical location: `skills/module.yaml` (BMAD 6.2.2+ / 6.3.0). The previous
-# location `lib/bmad-extension/module.yaml` was moved here during Story 22.5.
-# PluginResolver (tools/installer/modules/plugin-resolver.js) discovers this
-# file as the "common parent of all skills" under Strategy 1.
-#
-# module_version policy (Story 22.5 / AC 7):
-#   - Patch: bug fixes within existing skills
-#   - Minor: skill added, additive change
-#   - Major: skill removed, renamed, or breaking change to skill behavior
-# Bump this whenever marketplace.json.template's skills[] list or any
-# bmad-skill-manifest.yaml is modified.
-
-code: ma-skills
-name: "MA-Agents Skills & Agents"
-description: "Enterprise methodology enforcement, specialized agents, and operational workflows"
-module_version: "3.6.2"
-extends-module: bmm
-default_selected: false

package/lib/bmad-cache/bmb/skills/bmad-agent-builder/references/sample-init-sanctum.py

@@ -1,274 +0,0 @@
-#!/usr/bin/env python3
-"""
-First Breath — Deterministic sanctum scaffolding for the Creative Muse.
-
-This script runs BEFORE the conversational awakening. It creates the sanctum
-folder structure, copies template files with config values substituted,
-copies all capability files and their supporting references into the sanctum,
-and auto-generates CAPABILITIES.md from capability prompt frontmatter.
-
-After this script runs, the sanctum is fully self-contained — the agent does
-not depend on the skill bundle location for normal operation.
-
-Usage:
-    python3 init-sanctum.py <project-root> <skill-path>
-
-    project-root: The root of the project (where _bmad/ lives)
-    skill-path:   Path to the skill directory (where SKILL.md, references/, assets/ live)
-
-Example:
-    uv run scripts/init-sanctum.py /Users/me/myproject /path/to/agent-creative-muse
-"""
-
-import sys
-import re
-import shutil
-from datetime import date
-from pathlib import Path
-
-SKILL_NAME = "agent-creative-muse"
-SANCTUM_DIR = SKILL_NAME
-
-# Files that stay in the skill bundle (only used during First Breath)
-SKILL_ONLY_FILES = {"first-breath.md"}
-
-TEMPLATE_FILES = [
-    "INDEX-template.md",
-    "PERSONA-template.md",
-    "CREED-template.md",
-    "BOND-template.md",
-    "MEMORY-template.md",
-    "PULSE-template.md",
-]
-
-
-def parse_yaml_config(config_path: Path) -> dict:
-    """Simple YAML key-value parser. Handles top-level scalar values only."""
-    config = {}
-    if not config_path.exists():
-        return config
-    with open(config_path) as f:
-        for line in f:
-            line = line.strip()
-            if not line or line.startswith("#"):
-                continue
-            if ":" in line:
-                key, _, value = line.partition(":")
-                value = value.strip().strip("'\"")
-                if value:
-                    config[key.strip()] = value
-    return config
-
-
-def parse_frontmatter(file_path: Path) -> dict:
-    """Extract YAML frontmatter from a markdown file."""
-    meta = {}
-    with open(file_path) as f:
-        content = f.read()
-
-    match = re.match(r"^---\s*\n(.*?)\n---", content, re.DOTALL)
-    if not match:
-        return meta
-
-    for line in match.group(1).strip().split("\n"):
-        if ":" in line:
-            key, _, value = line.partition(":")
-            meta[key.strip()] = value.strip().strip("'\"")
-    return meta
-
-
-def copy_references(source_dir: Path, dest_dir: Path) -> list[str]:
-    """Copy all reference files (except skill-only files) into the sanctum."""
-    dest_dir.mkdir(parents=True, exist_ok=True)
-    copied = []
-
-    for source_file in sorted(source_dir.iterdir()):
-        if source_file.name in SKILL_ONLY_FILES:
-            continue
-        if source_file.is_file():
-            shutil.copy2(source_file, dest_dir / source_file.name)
-            copied.append(source_file.name)
-
-    return copied
-
-
-def copy_scripts(source_dir: Path, dest_dir: Path) -> list[str]:
-    """Copy any scripts the capabilities might use into the sanctum."""
-    if not source_dir.exists():
-        return []
-    dest_dir.mkdir(parents=True, exist_ok=True)
-    copied = []
-
-    for source_file in sorted(source_dir.iterdir()):
-        if source_file.is_file() and source_file.name != "init-sanctum.py":
-            shutil.copy2(source_file, dest_dir / source_file.name)
-            copied.append(source_file.name)
-
-    return copied
-
-
-def discover_capabilities(references_dir: Path, sanctum_refs_path: str) -> list[dict]:
-    """Scan references/ for capability prompt files with frontmatter."""
-    capabilities = []
-
-    for md_file in sorted(references_dir.glob("*.md")):
-        if md_file.name in SKILL_ONLY_FILES:
-            continue
-        meta = parse_frontmatter(md_file)
-        if meta.get("name") and meta.get("code"):
-            capabilities.append({
-                "name": meta["name"],
-                "description": meta.get("description", ""),
-                "code": meta["code"],
-                "source": f"{sanctum_refs_path}/{md_file.name}",
-            })
-    return capabilities
-
-
-def generate_capabilities_md(capabilities: list[dict]) -> str:
-    """Generate CAPABILITIES.md content from discovered capabilities."""
-    lines = [
-        "# Capabilities",
-        "",
-        "## Built-in",
-        "",
-        "| Code | Name | Description | Source |",
-        "|------|------|-------------|--------|",
-    ]
-    for cap in capabilities:
-        lines.append(
-            f"| [{cap['code']}] | {cap['name']} | {cap['description']} | `{cap['source']}` |"
-        )
-
-    lines.extend([
-        "",
-        "## Learned",
-        "",
-        "_Capabilities added by the owner over time. Prompts live in `capabilities/`._",
-        "",
-        "| Code | Name | Description | Source | Added |",
-        "|------|------|-------------|--------|-------|",
-        "",
-        "## How to Add a Capability",
-        "",
-        'Tell me "I want you to be able to do X" and we\'ll create it together.',
-        "I'll write the prompt, save it to `capabilities/`, and register it here.",
-        "Next session, I'll know how.",
-        "Load `./references/capability-authoring.md` for the full creation framework.",
-        "",
-        "## Tools",
-        "",
-        "Prefer crafting your own tools over depending on external ones. A script you wrote "
-        "and saved is more reliable than an external API. Use the file system creatively.",
-        "",
-        "### User-Provided Tools",
-        "",
-        "_MCP servers, APIs, or services the owner has made available. Document them here._",
-    ])
-
-    return "\n".join(lines) + "\n"
-
-
-def substitute_vars(content: str, variables: dict) -> str:
-    """Replace {var_name} placeholders with values from the variables dict."""
-    for key, value in variables.items():
-        content = content.replace(f"{{{key}}}", value)
-    return content
-
-
-def main():
-    if len(sys.argv) < 3:
-        print("Usage: python3 init-sanctum.py <project-root> <skill-path>")
-        sys.exit(1)
-
-    project_root = Path(sys.argv[1]).resolve()
-    skill_path = Path(sys.argv[2]).resolve()
-
-    # Paths
-    bmad_dir = project_root / "_bmad"
-    memory_dir = bmad_dir / "memory"
-    sanctum_path = memory_dir / SANCTUM_DIR
-    assets_dir = skill_path / "assets"
-    references_dir = skill_path / "references"
-    scripts_dir = skill_path / "scripts"
-
-    # Sanctum subdirectories
-    sanctum_refs = sanctum_path / "references"
-    sanctum_scripts = sanctum_path / "scripts"
-
-    # Relative path for CAPABILITIES.md references (agent loads from within sanctum)
-    sanctum_refs_path = "./references"
-
-    # Check if sanctum already exists
-    if sanctum_path.exists():
-        print(f"Sanctum already exists at {sanctum_path}")
-        print("This agent has already been born. Skipping First Breath scaffolding.")
-        sys.exit(0)
-
-    # Load config
-    config = {}
-    for config_file in ["config.yaml", "config.user.yaml"]:
-        config.update(parse_yaml_config(bmad_dir / config_file))
-
-    # Build variable substitution map
-    today = date.today().isoformat()
-    variables = {
-        "user_name": config.get("user_name", "friend"),
-        "communication_language": config.get("communication_language", "English"),
-        "birth_date": today,
-        "project_root": str(project_root),
-        "sanctum_path": str(sanctum_path),
-    }
-
-    # Create sanctum structure
-    sanctum_path.mkdir(parents=True, exist_ok=True)
-    (sanctum_path / "capabilities").mkdir(exist_ok=True)
-    (sanctum_path / "sessions").mkdir(exist_ok=True)
-    print(f"Created sanctum at {sanctum_path}")
-
-    # Copy reference files (capabilities + techniques + guidance) into sanctum
-    copied_refs = copy_references(references_dir, sanctum_refs)
-    print(f"  Copied {len(copied_refs)} reference files to sanctum/references/")
-    for name in copied_refs:
-        print(f"    - {name}")
-
-    # Copy any supporting scripts into sanctum
-    copied_scripts = copy_scripts(scripts_dir, sanctum_scripts)
-    if copied_scripts:
-        print(f"  Copied {len(copied_scripts)} scripts to sanctum/scripts/")
-        for name in copied_scripts:
-            print(f"    - {name}")
-
-    # Copy and substitute template files
-    for template_name in TEMPLATE_FILES:
-        template_path = assets_dir / template_name
-        if not template_path.exists():
-            print(f"  Warning: template {template_name} not found, skipping")
-            continue
-
-        # Remove "-template" from the output filename and uppercase it
-        output_name = template_name.replace("-template", "").upper()
-        # Fix extension casing: .MD -> .md
-        output_name = output_name[:-3] + ".md"
-
-        content = template_path.read_text()
-        content = substitute_vars(content, variables)
-
-        output_path = sanctum_path / output_name
-        output_path.write_text(content)
-        print(f"  Created {output_name}")
-
-    # Auto-generate CAPABILITIES.md from references/ frontmatter
-    capabilities = discover_capabilities(references_dir, sanctum_refs_path)
-    capabilities_content = generate_capabilities_md(capabilities)
-    (sanctum_path / "CAPABILITIES.md").write_text(capabilities_content)
-    print(f"  Created CAPABILITIES.md ({len(capabilities)} built-in capabilities discovered)")
-
-    print()
-    print("First Breath scaffolding complete.")
-    print("The conversational awakening can now begin.")
-    print(f"Sanctum: {sanctum_path}")
-
-
-if __name__ == "__main__":
-    main()