loom-browser 0.0.1 → 0.0.3

package/dist/types/tabix/tabixReader.d.ts

@@ -1,60 +0,0 @@
-/**
- * Tabix file reader — top-level API for querying BGZF-compressed,
- * tabix-indexed genomic files.
- *
- * Combines index loading, BGZF block fetching, and line extraction to
- * return raw text lines for a genomic range. Format-specific parsing
- * (BED→features, VCF→variants, GFF→annotations) is a separate concern
- * (Infrastructure Gap #7).
- *
- * Port of js/feature/featureFileReader.ts (tabix path).
- * Layer 1 (Data + Layout): pure data, no DOM.
- */
-import type { TabixIndex, TabixHeader } from './tabixIndex';
-import type { WorkerProvider } from '../workerProvider';
-export interface TabixReaderOptions {
-    /** URL to the .tbi index file. Defaults to `url + '.tbi'`. */
-    indexUrl?: string;
-    /** Worker provider for offloading BGZF decompression. */
-    workerProvider?: WorkerProvider;
-}
-export declare class TabixReader {
-    private readonly url;
-    private readonly indexUrl;
-    private readonly blockLoader;
-    private readonly workerProvider?;
-    private _index;
-    constructor(url: string, options?: TabixReaderOptions);
-    /**
-     * Lazy-load and cache the tabix index.
-     * Fetches the entire .tbi file, decompresses (BGZF), and parses the binary index.
-     */
-    getIndex(signal?: AbortSignal): Promise<TabixIndex>;
-    /** Get the tabix header metadata (format, column indices, meta char, skip count). */
-    getHeader(signal?: AbortSignal): Promise<TabixHeader>;
-    /** Get sequence names from the index. */
-    getSequenceNames(signal?: AbortSignal): Promise<string[]>;
-    /**
-     * Read header lines from the beginning of the BGZF data file.
-     *
-     * Returns lines that start with the meta character (e.g. '#' for VCF)
-     * or are within the skip count declared in the index header.
-     */
-    readHeaderLines(signal?: AbortSignal): Promise<string[]>;
-    /**
-     * Read all text lines overlapping a genomic range.
-     *
-     * Returns raw tab-delimited lines (not parsed). The caller is responsible
-     * for format-specific parsing (BED, VCF, GFF, etc.).
-     *
-     * @param chr - Chromosome/sequence name (must match the name in the index)
-     * @param start - Start position (0-based)
-     * @param end - End position (exclusive)
-     */
-    readLines(chr: string, start: number, end: number, signal?: AbortSignal): Promise<string[]>;
-    /**
-     * Parse a position value from a token array.
-     * BED format (format=0) is 0-based; VCF/GFF (format=2) and SAM (format=1) are 1-based.
-     */
-    private parsePosition;
-}

package/dist/types/tabix/virtualOffset.d.ts

@@ -1,41 +0,0 @@
-/**
- * BGZF virtual file offsets.
- *
- * A virtual offset is a 64-bit value encoding both the position of a
- * compressed BGZF block in the file and the byte offset within the
- * decompressed block. Used by tabix (.tbi) and BAI (.bai) indices.
- *
- * Port of js/binary.ts VPointer class, reimplemented as plain interfaces
- * + pure functions (matching src/ conventions).
- */
-import type { BinaryParser } from '../bigwig/binaryParser';
-/** A BGZF virtual file offset: compressed block position + offset within decompressed block. */
-export interface VirtualOffset {
-    /** Byte offset of the BGZF block start in the compressed file. */
-    block: number;
-    /** Byte offset within the decompressed block. */
-    offset: number;
-}
-/** A span of data in a BGZF file between two virtual offsets. */
-export interface Chunk {
-    minv: VirtualOffset;
-    maxv: VirtualOffset;
-}
-export declare function createVirtualOffset(block: number, offset: number): VirtualOffset;
-export declare function isGreaterThan(a: VirtualOffset, b: VirtualOffset): boolean;
-export declare function isLessThan(a: VirtualOffset, b: VirtualOffset): boolean;
-export declare function isEqualTo(a: VirtualOffset, b: VirtualOffset): boolean;
-/**
- * Read an 8-byte virtual offset from a BinaryParser.
- *
- * Byte layout (all little-endian):
- *   bytes 0–1: within-block offset (uint16 LE)
- *   bytes 2–6: compressed block file offset (5-byte uint, LE)
- *   byte 7: unused
- *
- * Uses multiplication (not bitwise ops) for the upper bytes to avoid
- * JavaScript's 32-bit integer limit on bitwise operations.
- *
- * Port of js/binary.ts BinaryParser.getVPointer().
- */
-export declare function readVirtualOffset(parser: BinaryParser): VirtualOffset;

package/dist/types/test/src/mockCanvasProvider.d.ts

@@ -1,67 +0,0 @@
-/**
- * Mock CanvasProvider for headless tests — no DOM required.
- */
-import type { CanvasProvider, CanvasAndContext } from '../../src/canvasProvider';
-import type { Locus, Track, TrackSessionConfig } from '../../src/types';
-import type { RenderTheme } from '../../src/themes/renderTheme';
-export interface MockCanvasOptions {
-    width?: number;
-    height?: number;
-}
-/** Create a mock HTMLCanvasElement-like object. */
-export declare function createMockCanvas(options?: MockCanvasOptions): HTMLCanvasElement;
-export declare class MockCanvasProvider implements CanvasProvider {
-    readonly devicePixelRatio = 1;
-    createCanvas(width: number, height: number): CanvasAndContext;
-}
-export declare const mockCanvasProvider: MockCanvasProvider;
-export interface MockTrackOptions {
-    type?: string;
-    width?: number;
-    height?: number;
-}
-/**
- * Minimal Track implementation for browser tests.
- * Records calls for assertion.
- */
-export declare class MockTrack implements Track {
-    readonly type: string;
-    readonly canvas: HTMLCanvasElement;
-    private _locus;
-    private _height;
-    setLocusCalls: Locus[];
-    renderCalls: number;
-    features: unknown[] | null;
-    get locus(): Locus;
-    get height(): number;
-    constructor(options?: MockTrackOptions);
-    setLocus(locus: Locus): void;
-    render(): void;
-    attachTo(_container: HTMLElement): void;
-    detach(): void;
-    setFeatures(features: unknown[]): void;
-    suspendRendering(): void;
-    resumeRendering(): void;
-    setError(_error: Error | null): void;
-    hitTest(_x: number, _y: number): never[];
-    renderToContext(_ctx: CanvasRenderingContext2D, _width: number, _height: number): void;
-    serializeConfig(_theme: RenderTheme): TrackSessionConfig;
-}
-export interface MockDataSourceOptions<F = unknown> {
-    features?: F[];
-    /** If set, fetch will reject with this error. */
-    error?: Error;
-    /** Delay in ms before resolving. */
-    delay?: number;
-}
-export declare class MockDataSource<F = unknown> {
-    private features;
-    private error;
-    private delay;
-    fetchCalls: Array<{
-        locus: Locus;
-        bpPerPixel: number;
-    }>;
-    constructor(options?: MockDataSourceOptions<F>);
-    fetch(locus: Locus, bpPerPixel: number, signal?: AbortSignal): Promise<F[]>;
-}

package/dist/types/test/src/testBedDecode.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testCanvas2SVG.d.ts

@@ -1,7 +0,0 @@
-/**
- * Tests for Canvas2SVG (src/export/canvas2svg.ts).
- *
- * Uses jsdom to provide DOM APIs (document.createElementNS, XMLSerializer)
- * required by the Canvas2SVG context.
- */
-export {};

package/dist/types/test/src/testChromAlias.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testCommandDispatcher.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testData.d.ts

@@ -1,7 +0,0 @@
-/**
- * Tests for src/data/ — cachedSequence, ucscSequence, ucscApi.
- *
- * Achieves parity with legacy test/testCachedSequence.js (cache behavior)
- * plus coverage for UCSC API clients.
- */
-export {};

package/dist/types/test/src/testDataLifecycle.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testDataSourceCacheKey.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testDataSources.d.ts

@@ -1,5 +0,0 @@
-/**
- * Tests for src/dataSources/ — SequenceDataSource, BigWigDataSource,
- * GeneDataSource, TextFeatureSource, and featureSourceFactory.
- */
-export {};

package/dist/types/test/src/testDecodeUcsc.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testEvents.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testFeatureCache.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testFeatureParser.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testFormatDetection.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testGffDecode.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testHeadlessBrowser.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testInteractionDecoder.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testIntervalTree.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testLocusUtils.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testPack.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testROI.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testRemoteProtocol.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testRenderTheme.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testSVGExport.d.ts

@@ -1,5 +0,0 @@
-/**
- * Tests for SVG export integration:
- * - HeadlessGenomeBrowser.toSVG()
- */
-export {};

package/dist/types/test/src/testSequence.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testSession.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testTrackSelector.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testTrackSerialize.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testWigSummary.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/types/test/src/testWorkerDispatch.d.ts

@@ -1,9 +0,0 @@
-/**
- * Tests for worker task dispatch wiring.
- *
- * Verifies that:
- * 1. MainThreadProvider correctly handles all task types (including new ones)
- * 2. WorkerProvider is threaded through data sources and track canvases
- * 3. Tasks are dispatched (not just executed synchronously) when workerProvider is set
- */
-export {};

package/dist/types/tracks/gene/geneRenderer.d.ts

@@ -1,17 +0,0 @@
-/**
- * Standalone gene feature renderer.
- *
- * Adapted from js/feature/render/renderFeature.ts but with no `this` context —
- * all configuration is passed as explicit parameters.
- *
- * Scope: exon/UTR/CDS rendering, intron lines, strand arrows, labels.
- * Deferred: amino acid rendering, QTL selection highlighting.
- */
-import type { GeneFeature, GeneRenderConfig, RenderContext } from '../../types';
-/**
- * Render a set of gene features onto a canvas context.
- *
- * Features should already have `.row` assigned (via `pack()`).
- * The canvas should be sized and cleared before calling this.
- */
-export declare function renderGeneTrack(ctx: CanvasRenderingContext2D, features: GeneFeature[], config: GeneRenderConfig, rc: RenderContext): void;

package/dist/types/tracks/gene/geneThemes.d.ts

@@ -1,11 +0,0 @@
-/**
- * Preset render themes for gene tracks.
- *
- * Each theme is a Partial<GeneRenderConfig> that can be spread over defaults.
- * Usage: { ...defaultGeneRenderConfig(), ...modernTheme }
- */
-import type { GeneRenderConfig } from '../../types';
-/** Modern theme — softer colors, rounded exons, strand-based coloring. */
-export declare const modernTheme: Partial<GeneRenderConfig>;
-/** Dark theme — modern theme adapted for dark backgrounds. */
-export declare const darkTheme: Partial<GeneRenderConfig>;

package/dist/types/tracks/gene/geneTrackCanvas.d.ts

@@ -1,58 +0,0 @@
-/**
- * Canvas manager for rendering gene features.
- *
- * Extends BaseTrackCanvas — canvas lifecycle (DPR, resize, attach/detach,
- * background) is handled by the base class. This class only implements
- * gene-specific logic: feature packing, height computation, and rendering.
- *
- * Usage:
- *   const canvas = document.createElement('canvas')
- *   const track = new GeneTrackCanvas(canvas, { locus, features })
- *   track.attachTo(containerDiv)
- */
-import type { GeneFeature, GeneRenderConfig, Locus, RenderContext, GeneTrackSessionConfig, HitTestResult, AxisInfo, ContextMenuItem } from '../../types';
-import type { CanvasProvider } from '../../canvasProvider';
-import type { WorkerProvider } from '../../workerProvider';
-import type { RenderTheme } from '../../themes/renderTheme';
-import { BaseTrackCanvas } from '../baseTrackCanvas';
-export type { Locus } from '../../types';
-export interface GeneTrackCanvasOptions {
-    locus: Locus;
-    features: GeneFeature[];
-    /** Per-track config overrides. Applied after theme-derived defaults. */
-    config?: Partial<GeneRenderConfig>;
-    /** Unified render theme. Palette drives default colors/fonts. */
-    theme?: Partial<RenderTheme>;
-    /** Fixed pixel height. If not set, computed from row count. */
-    height?: number;
-    /** Background color. Default: palette.background. */
-    background?: string;
-    /** Canvas provider for environment abstraction. Default: DOMCanvasProvider. */
-    canvasProvider?: CanvasProvider;
-    /** Worker provider for offloading CPU-intensive tasks (packing). */
-    workerProvider?: WorkerProvider;
-    /** Track name for axis label. */
-    name?: string;
-}
-export declare class GeneTrackCanvas extends BaseTrackCanvas<GeneRenderConfig> {
-    private features;
-    private fixedHeight;
-    private background;
-    private _name;
-    private workerProvider?;
-    /** Most recently packed features, available after render(). */
-    private packedFeatures;
-    /** Whether packedFeatures was pre-computed by async worker (skip sync pack in computeHeight). */
-    private packedReady;
-    readonly type = "gene";
-    constructor(canvas: HTMLCanvasElement, options: GeneTrackCanvasOptions);
-    /** Update features and re-render. Dispatches async pack when workerProvider is set. */
-    setFeatures(features: GeneFeature[]): void;
-    protected computeHeight(_width: number): number;
-    protected getBackground(): string;
-    protected doRender(ctx: CanvasRenderingContext2D, _width: number, _height: number, rc: RenderContext): void;
-    getAxisInfo(): AxisInfo | undefined;
-    getContextMenuItems(_x: number, _y: number): ContextMenuItem[];
-    hitTest(x: number, y: number): HitTestResult<GeneFeature>[];
-    serializeConfig(theme: RenderTheme): GeneTrackSessionConfig;
-}

package/dist/types/tracks/gene/index.d.ts

@@ -1,4 +0,0 @@
-export { renderGeneTrack } from './geneRenderer';
-export { GeneTrackCanvas } from './geneTrackCanvas';
-export type { GeneTrackCanvasOptions } from './geneTrackCanvas';
-export { modernTheme, darkTheme } from './geneThemes';

package/dist/types/ui/components/IgvBrowserShell.d.ts

@@ -1,52 +0,0 @@
-/**
- * <igv-browser> — Top-level shell combining navbar + GenomeBrowser.
- *
- * Usage:
- *   const shell = document.createElement('igv-browser')
- *   shell.setAttribute('theme', 'modern')
- *   container.appendChild(shell)
- *   shell.initialize({ locus: { chr: 'chr17', start: 7668000, end: 7688000 } })
- *   shell.addTrack(rulerTrack)
- *   shell.addTrack(geneTrack)
- *
- * Or use the createShell() helper:
- *   const shell = createShell(container, { locus, theme: 'modern' })
- */
-import { GenomeBrowser } from '../../genomeBrowser';
-import type { GenomeBrowserOptions, BrowserEvents } from '../../genomeBrowser';
-import type { Locus, Track } from '../../types';
-import type { ShellTheme } from '../themes';
-export declare class IgvBrowserShell extends HTMLElement {
-    private navbar;
-    private trackContainer;
-    private themeStyle;
-    private _browser;
-    static get observedAttributes(): string[];
-    constructor();
-    attributeChangedCallback(name: string, _oldValue: string | null, newValue: string | null): void;
-    private applyTheme;
-    connectedCallback(): void;
-    /** Initialize the GenomeBrowser inside this shell. */
-    initialize(options: GenomeBrowserOptions): GenomeBrowser;
-    /** Get the underlying GenomeBrowser instance. */
-    get browser(): GenomeBrowser | null;
-    /** Proxy: add a track to the browser. */
-    addTrack(track: Track): void;
-    /** Proxy: remove a track from the browser. */
-    removeTrack(track: Track): void;
-    /** Proxy: set the locus. */
-    setLocus(locus: Locus): void;
-    /** Proxy: subscribe to browser events. */
-    on<K extends keyof BrowserEvents>(event: K, handler: (data: BrowserEvents[K]) => void): (() => void) | undefined;
-    disconnectedCallback(): void;
-}
-/** Options for createShell(). */
-export interface CreateShellOptions extends GenomeBrowserOptions {
-    /** UI shell theme (CSS chrome). Separate from GenomeBrowserOptions.theme (render palette). */
-    shellTheme?: ShellTheme;
-}
-/**
- * Convenience function to create an <igv-browser> shell and initialize it.
- * Returns the shell element (with .browser for the underlying GenomeBrowser).
- */
-export declare function createShell(container: HTMLElement, options: CreateShellOptions): IgvBrowserShell;

package/dist/types/ui/components/IgvChromosomeSelect.d.ts

@@ -1,18 +0,0 @@
-/**
- * <igv-chromosome-select> — Chromosome dropdown for quick navigation.
- *
- * Lists main chromosomes (chr1-22, X, Y, M) plus "All" for whole genome view.
- * Updates automatically when the browser locus changes.
- */
-import type { GenomeBrowser } from '../../genomeBrowser';
-export declare class IgvChromosomeSelect extends HTMLElement {
-    private select;
-    private unsubscribe;
-    private _browser;
-    constructor();
-    set browser(b: GenomeBrowser | null);
-    get browser(): GenomeBrowser | null;
-    private populate;
-    private updateSelection;
-    disconnectedCallback(): void;
-}

package/dist/types/ui/components/IgvExportControls.d.ts

@@ -1,13 +0,0 @@
-/**
- * <igv-export-controls> — SVG/PNG export buttons.
- *
- * Adds "Save SVG" and "Save PNG" buttons to the shell navbar.
- * Calls GenomeBrowser.saveSVGtoFile() and savePNGtoFile() respectively.
- */
-import type { GenomeBrowser } from '../../genomeBrowser';
-export declare class IgvExportControls extends HTMLElement {
-    private _browser;
-    constructor();
-    set browser(b: GenomeBrowser | null);
-    get browser(): GenomeBrowser | null;
-}

package/dist/types/ui/components/IgvLocusInput.d.ts

@@ -1,18 +0,0 @@
-/**
- * <igv-locus-input> — Locus search/display input.
- *
- * Shows the current locus as a formatted string. User can type a new locus
- * and press Enter to navigate. Updates automatically on locuschange events.
- */
-import type { GenomeBrowser } from '../../genomeBrowser';
-export declare class IgvLocusInput extends HTMLElement {
-    private input;
-    private unsubscribe;
-    private _browser;
-    constructor();
-    set browser(b: GenomeBrowser | null);
-    get browser(): GenomeBrowser | null;
-    private updateDisplay;
-    private doSearch;
-    disconnectedCallback(): void;
-}

package/dist/types/ui/components/IgvNavbar.d.ts

@@ -1,15 +0,0 @@
-/**
- * <igv-navbar> — Horizontal navigation bar composing locus input, window size, and zoom controls.
- */
-import type { GenomeBrowser } from '../../genomeBrowser';
-export declare class IgvNavbar extends HTMLElement {
-    private chromSelect;
-    private locusInput;
-    private zoomControls;
-    private windowSize;
-    private exportControls;
-    private _browser;
-    constructor();
-    set browser(b: GenomeBrowser | null);
-    get browser(): GenomeBrowser | null;
-}

package/dist/types/ui/components/IgvWindowSize.d.ts

@@ -1,14 +0,0 @@
-/**
- * <igv-window-size> — Read-only display of current viewport bp range.
- */
-import type { GenomeBrowser } from '../../genomeBrowser';
-export declare class IgvWindowSize extends HTMLElement {
-    private label;
-    private unsubscribe;
-    private _browser;
-    constructor();
-    set browser(b: GenomeBrowser | null);
-    get browser(): GenomeBrowser | null;
-    private update;
-    disconnectedCallback(): void;
-}

package/dist/types/ui/components/IgvZoomControls.d.ts

@@ -1,10 +0,0 @@
-/**
- * <igv-zoom-controls> — Zoom in/out buttons.
- */
-import type { GenomeBrowser } from '../../genomeBrowser';
-export declare class IgvZoomControls extends HTMLElement {
-    private _browser;
-    constructor();
-    set browser(b: GenomeBrowser | null);
-    get browser(): GenomeBrowser | null;
-}

package/dist/types/wigRenderer.d.ts

@@ -1,15 +0,0 @@
-/**
- * Standalone wig track renderer.
- *
- * Adapted from js/feature/wigTrack.ts draw() method with no `this` context —
- * all configuration is passed as explicit parameters.
- *
- * Supports four graph types: bar, line, points, and dynseq.
- */
-import type { WigFeature, WigRenderConfig, RenderContext } from './types';
-/**
- * Render wig features onto a canvas context.
- *
- * The canvas should be sized and cleared before calling this.
- */
-export declare function renderWigTrack(ctx: CanvasRenderingContext2D, features: WigFeature[], config: WigRenderConfig, rc: RenderContext): void;

package/dist/types/wigSummary.d.ts

@@ -1,31 +0,0 @@
-/**
- * Resolution-aware data summarization for wig tracks.
- *
- * When zoomed out, many data points map to the same pixel. This module bins
- * features and applies a window function (mean, min, max) to produce one
- * summary value per pixel-width bin.
- *
- * Ported from js/feature/wigSummary.ts with strict types, no `any`.
- */
-import type { WigFeature, WindowFunction } from './types';
-/**
- * Summarize wig features by binning into pixel-width windows and applying
- * a window function.
- *
- * Features must be sorted by position. Wig features cannot overlap.
- *
- * @param features - sorted array of wig features
- * @param startBP - start position in base pairs (left edge of viewport)
- * @param bpPerPixel - base pairs per pixel (bin size)
- * @param windowFunction - aggregation function: mean, min, max, or none
- * @returns summarized features (one per pixel-bin)
- */
-export declare function summarizeWigData(features: WigFeature[], startBP: number, bpPerPixel: number, windowFunction?: WindowFunction): WigFeature[];
-/**
- * Compute the min/max data range from a set of wig features.
- * Useful for autoscaling.
- */
-export declare function computeWigDataRange(features: WigFeature[]): {
-    min: number;
-    max: number;
-};

package/dist/types/wigThemes.d.ts

@@ -1,15 +0,0 @@
-/**
- * Preset render themes for wig tracks.
- *
- * Each theme is a Partial<WigRenderConfig> that can be spread over defaults.
- * Usage: { ...defaultWigRenderConfig(), ...modernWigTheme }
- */
-import type { WigRenderConfig } from './types';
-/** Modern theme — blue bars with subtle styling. */
-export declare const modernWigTheme: Partial<WigRenderConfig>;
-/** Dark theme — bright teal on dark background. */
-export declare const darkWigTheme: Partial<WigRenderConfig>;
-/** Warm red theme — for coverage or signal intensity. */
-export declare const warmWigTheme: Partial<WigRenderConfig>;
-/** Line graph variant — modern blue line. */
-export declare const lineWigTheme: Partial<WigRenderConfig>;

package/dist/types/wigTrackCanvas.d.ts

@@ -1,46 +0,0 @@
-/**
- * Canvas manager for rendering wig (wiggle) tracks.
- *
- * Extends BaseTrackCanvas — canvas lifecycle is handled by the base class.
- * This class implements wig-specific logic: data summarization, autoscale,
- * and dynseq-aware rendering.
- *
- * For dynseq mode, features should arrive with `.sequence` already attached
- * (e.g. via DynseqDataSource). This matches the igv.js pattern where sequence
- * is fetched during getFeatures(), not during rendering.
- *
- * Usage:
- *   const canvas = document.createElement('canvas')
- *   const track = new WigTrackCanvas(canvas, { locus, features })
- *   track.attachTo(containerDiv)
- */
-import type { WigFeature, WigRenderConfig, Locus, RenderContext, WigTrackSessionConfig } from './types';
-import type { CanvasProvider } from './canvasProvider';
-import type { RenderTheme } from './renderTheme';
-import { BaseTrackCanvas } from './baseTrackCanvas';
-export interface WigTrackCanvasOptions {
-    locus: Locus;
-    features: WigFeature[];
-    /** Per-track config overrides. Applied after theme-derived defaults. */
-    config?: Partial<WigRenderConfig>;
-    /** Unified render theme. Palette drives default colors/fonts. */
-    theme?: Partial<RenderTheme>;
-    /** Fixed pixel height. If not set, uses config.height (default 50). */
-    height?: number;
-    /** Background color. Overrides palette.background if set. */
-    background?: string;
-    /** Canvas provider for environment abstraction. Default: DOMCanvasProvider. */
-    canvasProvider?: CanvasProvider;
-}
-export declare class WigTrackCanvas extends BaseTrackCanvas<WigRenderConfig> {
-    private features;
-    private fixedHeight;
-    readonly type = "wig";
-    constructor(canvas: HTMLCanvasElement, options: WigTrackCanvasOptions);
-    /** Update features and re-render. Recomputes autoscale if enabled. */
-    setFeatures(features: WigFeature[]): void;
-    protected computeHeight(_width: number): number;
-    protected getBackground(): string;
-    protected doRender(ctx: CanvasRenderingContext2D, _width: number, height: number, rc: RenderContext): void;
-    serializeConfig(theme: RenderTheme): WigTrackSessionConfig;
-}