lincd-cli 0.2.41 → 0.2.43

package/lib/cli-methods.js

@@ -1,679 +1,855 @@
-"use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
+'use strict';
+var __createBinding =
+  (this && this.__createBinding) ||
+  (Object.create
+    ? function (o, m, k, k2) {
+        if (k2 === undefined) k2 = k;
+        var desc = Object.getOwnPropertyDescriptor(m, k);
+        if (!desc || ('get' in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+          desc = {
+            enumerable: true,
+            get: function () {
+              return m[k];
+            },
+          };
+        }
+        Object.defineProperty(o, k2, desc);
+      }
+    : function (o, m, k, k2) {
+        if (k2 === undefined) k2 = k;
+        o[k2] = m[k];
+      });
+var __setModuleDefault =
+  (this && this.__setModuleDefault) ||
+  (Object.create
+    ? function (o, v) {
+        Object.defineProperty(o, 'default', {enumerable: true, value: v});
+      }
+    : function (o, v) {
+        o['default'] = v;
+      });
+var __importStar =
+  (this && this.__importStar) ||
+  function (mod) {
     if (mod && mod.__esModule) return mod;
     var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    if (mod != null)
+      for (var k in mod)
+        if (k !== 'default' && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
     __setModuleDefault(result, mod);
     return result;
-};
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+  };
+var __awaiter =
+  (this && this.__awaiter) ||
+  function (thisArg, _arguments, P, generator) {
+    function adopt(value) {
+      return value instanceof P
+        ? value
+        : new P(function (resolve) {
+            resolve(value);
+          });
+    }
+
     return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
+      function fulfilled(value) {
+        try {
+          step(generator.next(value));
+        } catch (e) {
+          reject(e);
+        }
+      }
+
+      function rejected(value) {
+        try {
+          step(generator['throw'](value));
+        } catch (e) {
+          reject(e);
+        }
+      }
+
+      function step(result) {
+        result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected);
+      }
+
+      step((generator = generator.apply(thisArg, _arguments || [])).next());
     });
-};
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.executeCommandForPackage = exports.addCapacitor = exports.addLinesToFile = exports.executeCommandForEachPackage = exports.buildUpdated = exports.publishPackage = exports.publishUpdated = exports.buildPackage = exports.buildMetadata = exports.register = exports.createPackage = exports.depCheck = exports.createComponent = exports.createSetComponent = exports.createShape = exports.setNameVariables = exports.createOntology = exports.getLincdPackages = exports.buildAll = exports.developPackage = exports.createApp = void 0;
-const path_1 = __importDefault(require("path"));
-const fs_extra_1 = __importDefault(require("fs-extra"));
-const utils_1 = require("./utils");
-const chalk_1 = __importDefault(require("chalk"));
-const child_process_1 = require("child_process");
-const models_1 = require("lincd/lib/models");
-const env_cmd_1 = require("env-cmd");
-const JSONLDWriter_1 = require("lincd-jsonld/lib/utils/JSONLDWriter");
-const NameSpace_1 = require("lincd/lib/utils/NameSpace");
-const Prefix_1 = require("lincd/lib/utils/Prefix");
-const get_env_vars_1 = require("env-cmd/dist/get-env-vars");
-const depcheck_1 = __importDefault(require("depcheck"));
+  };
+var __importDefault =
+  (this && this.__importDefault) ||
+  function (mod) {
+    return mod && mod.__esModule ? mod : {default: mod};
+  };
+Object.defineProperty(exports, '__esModule', {value: true});
+exports.executeCommandForPackage =
+  exports.addCapacitor =
+  exports.addLinesToFile =
+  exports.executeCommandForEachPackage =
+  exports.buildUpdated =
+  exports.publishPackage =
+  exports.publishUpdated =
+  exports.buildPackage =
+  exports.buildMetadata =
+  exports.register =
+  exports.createPackage =
+  exports.depCheck =
+  exports.createComponent =
+  exports.createSetComponent =
+  exports.createShape =
+  exports.setNameVariables =
+  exports.createOntology =
+  exports.getLincdPackages =
+  exports.buildAll =
+  exports.developPackage =
+  exports.createApp =
+    void 0;
+const path_1 = __importDefault(require('path'));
+const fs_extra_1 = __importDefault(require('fs-extra'));
+const utils_1 = require('./utils');
+const chalk_1 = __importDefault(require('chalk'));
+const child_process_1 = require('child_process');
+const models_1 = require('lincd/lib/models');
+const env_cmd_1 = require('env-cmd');
+const JSONLDWriter_1 = require('lincd-jsonld/lib/utils/JSONLDWriter');
+const NameSpace_1 = require('lincd/lib/utils/NameSpace');
+const Prefix_1 = require('lincd/lib/utils/Prefix');
+const get_env_vars_1 = require('env-cmd/dist/get-env-vars');
+const depcheck_1 = __importDefault(require('depcheck'));
 var glob = require('glob');
 var variables = {};
 var open = require('open');
 var gruntConfig;
-const createApp = (name, basePath = process.cwd()) => __awaiter(void 0, void 0, void 0, function* () {
+const createApp = (name, basePath = process.cwd()) =>
+  __awaiter(void 0, void 0, void 0, function* () {
     if (!name) {
-        console.warn('Please provide a name as the first argument');
+      console.warn('Please provide a name as the first argument');
     }
-    let { hyphenName, camelCaseName, underscoreName } = (0, exports.setNameVariables)(name);
+    let {hyphenName, camelCaseName, underscoreName} = (0, exports.setNameVariables)(name);
     let targetFolder = path_1.default.join(basePath, hyphenName);
     if (!fs_extra_1.default.existsSync(targetFolder)) {
-        fs_extra_1.default.mkdirSync(targetFolder);
+      fs_extra_1.default.mkdirSync(targetFolder);
     }
     fs_extra_1.default.copySync(path_1.default.join(__dirname, '..', 'defaults', 'app-with-backend'), targetFolder);
     //make sure the data folder exists (even though its empty).. copying empty folders does not work with fs.copySync
-    fs_extra_1.default.mkdirSync(path_1.default.join(targetFolder, 'data'), { recursive: true });
-    fs_extra_1.default.mkdirSync(path_1.default.join(targetFolder, 'data/uploads/resized'), { recursive: true });
-    fs_extra_1.default.renameSync(path_1.default.join(targetFolder, 'gitignore.template'), path_1.default.join(targetFolder, '.gitignore'));
-    fs_extra_1.default.renameSync(path_1.default.join(targetFolder, 'yarnrc.yml.template'), path_1.default.join(targetFolder, '.yarnrc.yml'));
+    fs_extra_1.default.mkdirSync(path_1.default.join(targetFolder, 'data'), {recursive: true});
+    fs_extra_1.default.mkdirSync(path_1.default.join(targetFolder, 'data/uploads/resized'), {recursive: true});
+    fs_extra_1.default.renameSync(
+      path_1.default.join(targetFolder, 'gitignore.template'),
+      path_1.default.join(targetFolder, '.gitignore'),
+    );
+    fs_extra_1.default.renameSync(
+      path_1.default.join(targetFolder, 'yarnrc.yml.template'),
+      path_1.default.join(targetFolder, '.yarnrc.yml'),
+    );
     // fs.copySync(path.join(__dirname, '..', 'defaults', 'app'), targetFolder);
     log("Creating new LINCD application '" + name + "'");
     //replace variables in some copied files
     yield replaceVariablesInFolder(targetFolder);
     let hasYarn = yield hasYarnInstalled();
     let installCommand = hasYarn
-        ? 'export NODE_OPTIONS="--no-network-family-autoselection" && yarn install'
-        : 'npm install';
+      ? 'export NODE_OPTIONS="--no-network-family-autoselection" && yarn install'
+      : 'npm install';
     yield (0, utils_1.execp)(`cd ${hyphenName} && ${installCommand}`, true).catch((err) => {
-        console.warn('Could not install dependencies or start application');
+      console.warn('Could not install dependencies or start application');
     });
-    log(`Your LINCD App is ready at ${chalk_1.default.blueBright(targetFolder)}`, `To start, run\n${chalk_1.default.blueBright(`cd ${hyphenName}`)} and then ${chalk_1.default.blueBright((hasYarn ? 'yarn' : 'npm') + ' start')}`);
-});
+    log(
+      `Your LINCD App is ready at ${chalk_1.default.blueBright(targetFolder)}`,
+      `To start, run\n${chalk_1.default.blueBright(`cd ${hyphenName}`)} and then ${chalk_1.default.blueBright(
+        (hasYarn ? 'yarn' : 'npm') + ' start',
+      )}`,
+    );
+  });
 exports.createApp = createApp;
+
 function logHelp() {
-    (0, utils_1.execp)('yarn exec lincd help');
+  (0, utils_1.execp)('yarn exec lincd help');
 }
+
 function log(...messages) {
-    messages.forEach((message) => {
-        console.log(chalk_1.default.cyan('Info: ') + message);
-    });
+  messages.forEach((message) => {
+    console.log(chalk_1.default.cyan('Info: ') + message);
+  });
 }
+
 function progressUpdate(message) {
-    process.stdout.write('                                                                    \r');
-    process.stdout.write(message + '\r');
+  process.stdout.write('                                                                    \r');
+  process.stdout.write(message + '\r');
 }
+
 function debugInfo(...messages) {
-    // messages.forEach((message) => {
-    //   console.log(chalk.cyan('Info: ') + message);
-    // });
-    //@TODO: let packages also use lincd.config.json? instead of gruntfile...
-    // that way we can read "analyse" here and see if we need to log debug info
-    // if(!gruntConfig)
-    // {
-    //   gruntConfig = getGruntConfig();
-    //   console.log(gruntConfig);
-    //   process.exit();
-    // }
-    if (gruntConfig && gruntConfig.analyse === true) {
-        messages.forEach((message) => {
-            console.log(chalk_1.default.cyan('Info: ') + message);
-        });
-    }
-}
-function warn(...messages) {
+  // messages.forEach((message) => {
+  //   console.log(chalk.cyan('Info: ') + message);
+  // });
+  //@TODO: let packages also use lincd.config.json? instead of gruntfile...
+  // that way we can read "analyse" here and see if we need to log debug info
+  // if(!gruntConfig)
+  // {
+  //   gruntConfig = getGruntConfig();
+  //   console.log(gruntConfig);
+  //   process.exit();
+  // }
+  if (gruntConfig && gruntConfig.analyse === true) {
     messages.forEach((message) => {
-        console.log(chalk_1.default.magenta('Warning: ') + message);
-        // console.log(chalk.red(message));
+      console.log(chalk_1.default.cyan('Info: ') + message);
     });
+  }
 }
+
+function warn(...messages) {
+  messages.forEach((message) => {
+    console.log(chalk_1.default.magenta('Warning: ') + message);
+    // console.log(chalk.red(message));
+  });
+}
+
 function developPackage(target, mode) {
-    if (!target)
-        target = 'es6';
-    if (mode !== 'production')
-        mode = '';
-    else if (target !== 'es6')
-        log('target must be es6 when developing for production');
-    if (target == 'es5' || target == 'es6') {
-        // log('> Starting continuous development build for '+target+' target')
-        log('starting continuous development build');
-        log('grunt dev' + (target ? '-' + target : '') + (mode ? '-' + mode : '') + ' --color');
-        var command = (0, child_process_1.exec)('grunt dev' + (target ? '-' + target : '') + (mode ? '-' + mode : '') + ' --color');
-        command.stdout.pipe(process.stdout);
-        command.stderr.pipe(process.stderr);
-    }
-    else {
-        console.warn('unknown build target. Use es5 or es6');
-    }
+  if (!target) target = 'es6';
+  if (mode !== 'production') mode = '';
+  else if (target !== 'es6') log('target must be es6 when developing for production');
+  if (target == 'es5' || target == 'es6') {
+    // log('> Starting continuous development build for '+target+' target')
+    log('starting continuous development build');
+    log('grunt dev' + (target ? '-' + target : '') + (mode ? '-' + mode : '') + ' --color');
+    var command = (0, child_process_1.exec)(
+      'grunt dev' + (target ? '-' + target : '') + (mode ? '-' + mode : '') + ' --color',
+    );
+    command.stdout.pipe(process.stdout);
+    command.stderr.pipe(process.stderr);
+  } else {
+    console.warn('unknown build target. Use es5 or es6');
+  }
 }
+
 exports.developPackage = developPackage;
+
 function checkWorkspaces(rootPath, workspaces, res) {
-    // console.log('checking workspaces at '+rootPath+": "+workspaces.toString());
-    if (workspaces.packages) {
-        workspaces = workspaces.packages;
+  // console.log('checking workspaces at '+rootPath+": "+workspaces.toString());
+  if (workspaces.packages) {
+    workspaces = workspaces.packages;
+  }
+  workspaces.forEach((workspace) => {
+    let workspacePath = path_1.default.join(rootPath, workspace.replace('/*', ''));
+    if (workspace.indexOf('/*') !== -1) {
+      // console.log(workspacePath);
+      if (fs_extra_1.default.existsSync(workspacePath)) {
+        let folders = fs_extra_1.default.readdirSync(workspacePath);
+        folders.forEach((folder) => {
+          if (folder !== './' && folder !== '../') {
+            checkPackagePath(rootPath, path_1.default.join(workspacePath, folder), res);
+          }
+        });
+      }
+    } else {
+      checkPackagePath(rootPath, workspacePath, res);
     }
-    workspaces.forEach((workspace) => {
-        let workspacePath = path_1.default.join(rootPath, workspace.replace('/*', ''));
-        if (workspace.indexOf('/*') !== -1) {
-            // console.log(workspacePath);
-            if (fs_extra_1.default.existsSync(workspacePath)) {
-                let folders = fs_extra_1.default.readdirSync(workspacePath);
-                folders.forEach((folder) => {
-                    if (folder !== './' && folder !== '../') {
-                        checkPackagePath(rootPath, path_1.default.join(workspacePath, folder), res);
-                    }
-                });
-            }
-        }
-        else {
-            checkPackagePath(rootPath, workspacePath, res);
-        }
-    });
+  });
 }
+
 function checkPackagePath(rootPath, packagePath, res) {
-    let packageJsonPath = path_1.default.join(packagePath, 'package.json');
-    // console.log('checking '+packagePath);
-    if (fs_extra_1.default.existsSync(packageJsonPath)) {
-        var pack = JSON.parse(fs_extra_1.default.readFileSync(packageJsonPath, 'utf8'));
-        //some packages are not true lincd packages, but we still want them to be re-built automatically. This is what lincd_util is for
-        if (pack && pack.workspaces) {
-            checkWorkspaces(packagePath, pack.workspaces, res);
-        }
-        else if (pack && pack.lincd === true) {
-            res.push({
-                path: packagePath,
-                packageName: pack.name,
-            });
-        }
+  let packageJsonPath = path_1.default.join(packagePath, 'package.json');
+  // console.log('checking '+packagePath);
+  if (fs_extra_1.default.existsSync(packageJsonPath)) {
+    var pack = JSON.parse(fs_extra_1.default.readFileSync(packageJsonPath, 'utf8'));
+    //some packages are not true lincd packages, but we still want them to be re-built automatically. This is what lincd_util is for
+    if (pack && pack.workspaces) {
+      checkWorkspaces(packagePath, pack.workspaces, res);
+    } else if (pack && pack.lincd === true) {
+      res.push({
+        path: packagePath,
+        packageName: pack.name,
+      });
     }
+  }
 }
+
 function runOnPackagesGroupedByDependencies(lincdPackages, onBuildStack, onStackEnd) {
-    let dependencies = new Map();
-    //get dependencies of each package
-    let leastDependentPackage;
-    lincdPackages.forEach((pkg) => {
-        var pack = (0, utils_1.getPackageJSON)(pkg.path);
-        if (pack) {
-            //get lincd related dependencies and get the actual package details from the package map by removing '@dacore/' from the package name
-            let packageDependencies = Object.keys(pack.dependencies)
-                .filter((dependency) => lincdPackages.has(dependency))
-                .map((dependency) => {
-                return lincdPackages.has(dependency) ? lincdPackages.get(dependency) : dependency;
-            });
-            // console.log(package.packageName,packageDependencies.map())
-            dependencies.set(pkg, packageDependencies);
-        }
-    });
-    dependencies.forEach((PackageDependencies, pkg) => {
-        if (!PackageDependencies.some((dependency) => {
-            return typeof dependency !== 'string' && lincdPackages.has(dependency.packageName);
-        })) {
-            leastDependentPackage = pkg;
-        }
-    });
-    let startStack = [leastDependentPackage];
-    let done = new Set();
-    let results = [];
-    let runStack = (stack) => __awaiter(this, void 0, void 0, function* () {
-        let runFunction = onBuildStack(stack, dependencies);
-        //build the stack in parallel
-        let stackPromise = Promise.all(stack.map((pck) => {
-            // p = p.then(() => {
-            return runFunction(pck)
-                .catch(({ error, stdout, stderr }) => {
-                warn('Uncaught exception whilst running parallel function on ' + pck.packageName, error.message);
-                // warn(chalk.red(pck.packageName+' failed:'));
-                // console.log(stdout);
+  let dependencies = new Map();
+  //get dependencies of each package
+  let leastDependentPackage;
+  lincdPackages.forEach((pkg) => {
+    var pack = (0, utils_1.getPackageJSON)(pkg.path);
+    if (pack) {
+      //get lincd related dependencies and get the actual package details from the package map by removing '@dacore/' from the package name
+      let packageDependencies = Object.keys(pack.dependencies)
+        .filter((dependency) => lincdPackages.has(dependency))
+        .map((dependency) => {
+          return lincdPackages.has(dependency) ? lincdPackages.get(dependency) : dependency;
+        });
+      // console.log(package.packageName,packageDependencies.map())
+      dependencies.set(pkg, packageDependencies);
+    }
+  });
+  dependencies.forEach((PackageDependencies, pkg) => {
+    if (
+      !PackageDependencies.some((dependency) => {
+        return typeof dependency !== 'string' && lincdPackages.has(dependency.packageName);
+      })
+    ) {
+      leastDependentPackage = pkg;
+    }
+  });
+  let startStack = [leastDependentPackage];
+  let done = new Set();
+  let results = [];
+  let runStack = (stack) =>
+    __awaiter(this, void 0, void 0, function* () {
+      let runFunction = onBuildStack(stack, dependencies);
+      //build the stack in parallel
+      let stackPromise = Promise.all(
+        stack.map((pck) => {
+          // p = p.then(() => {
+          return runFunction(pck)
+            .catch(({error, stdout, stderr}) => {
+              warn('Uncaught exception whilst running parallel function on ' + pck.packageName, error.message);
+              // warn(chalk.red(pck.packageName+' failed:'));
+              // console.log(stdout);
             })
-                .then((res) => {
-                done.add(pck);
-                return res;
+            .then((res) => {
+              done.add(pck);
+              return res;
             });
-        }));
-        //wait till stack is completed
-        let stackResults = yield stackPromise;
-        results = results.concat(stackResults);
-        //clear stack for next round
-        stack = [];
-        //find those packages who have all their dependencies already built and add them to the stack
+        }),
+      );
+      //wait till stack is completed
+      let stackResults = yield stackPromise;
+      results = results.concat(stackResults);
+      //clear stack for next round
+      stack = [];
+      //find those packages who have all their dependencies already built and add them to the stack
+      lincdPackages.forEach((pkg) => {
+        let deps = dependencies.get(pkg);
+        //if the package is not done yet
+        //but every dependency is now done OR was not something we can build (some @dacore dependencies may not be local)
+        if (
+          !done.has(pkg) &&
+          deps.every((dependency) => {
+            return (
+              typeof dependency !== 'string' && (done.has(dependency) || !lincdPackages.has(dependency.packageName))
+            );
+          })
+        ) {
+          stack.push(pkg);
+        }
+      });
+      if (stack.length <= 0 && done.size < lincdPackages.size) {
+        console.log(
+          chalk_1.default.red('Only ' + done.size + ' out of ' + lincdPackages.size + ' packages have been built'),
+        );
+        console.log(
+          'ALL remaining packages have dependencies that have not been met. This may point to ' +
+            chalk_1.default.red('circular dependencies.'),
+        );
+        console.log(
+          'Already built: ' +
+            Array.from(done)
+              .map((p) => chalk_1.default.green(p.packageName))
+              .join(', '),
+        );
+        console.log(
+          chalk_1.default.blue('\nTo solve this issue') +
+            ': find the circular dependencies below and fix the dependencies:\n\n',
+        );
+        //TODO: actually find and name the packages that have circular dependencies
+        // let circular = [];
+        // lincdPackages.forEach((pkg) => {
+        //   if (!done.has(pkg))
+        //   {
+        //     let deps = dependencies.get(pkg);
+        //     if (deps.some(dependency => {
+        //       //return true if this dependency (indirectly) depends on the package whos' dependency it is
+        //       return hasDependency(dependency,pkg,dependencies)
+        //     }))
+        //     {
+        //       circular.push(pkg);
+        //     }
+        //     process.exit();
+        //   }
+        // });
         lincdPackages.forEach((pkg) => {
-            let deps = dependencies.get(pkg);
-            //if the package is not done yet
-            //but every dependency is now done OR was not something we can build (some @dacore dependencies may not be local)
-            if (!done.has(pkg) &&
-                deps.every((dependency) => {
-                    return typeof dependency !== 'string' && (done.has(dependency) || !lincdPackages.has(dependency.packageName));
-                })) {
-                stack.push(pkg);
-            }
+          let deps = dependencies.get(pkg);
+          if (!done.has(pkg)) {
+            console.log(
+              chalk_1.default.red(pkg.packageName) +
+                ' has not been built yet. Unbuilt dependencies:\n' +
+                deps
+                  .filter((dependency) => {
+                    return !Array.from(done).some((p) => {
+                      // console.log(p.packageName,dependency.packageName,p===dependency)
+                      return p === dependency;
+                    });
+                  })
+                  .map((p) =>
+                    chalk_1.default.red(
+                      '\t- ' +
+                        ((p === null || p === void 0 ? void 0 : p.packageName) ? p.packageName : p.toString()) +
+                        '\n',
+                    ),
+                  )
+                  .join(' '),
+            );
+            // console.log(chalk.red(pkg.packageName)+' has not been built yet. Built dependencies:\n' + deps.filter(dependency => {
+            //   return Array.from(done).some(p => p.packageName === pkg.packageName)
+            // }).map(p => chalk.green('\t- '+p.packageName+'\n')).join(" "))
+            // console.log(chalk.red(pkg.packageName)+' has not been built yet. Built dependencies:\n' + deps.filter(dependency => done.has(pkg)).map(p => chalk.green('\t- '+p.packageName+'\n')).join(" "))
+          }
         });
-        if (stack.length <= 0 && done.size < lincdPackages.size) {
-            console.log(chalk_1.default.red('Only ' + done.size + ' out of ' + lincdPackages.size + ' packages have been built'));
-            console.log('ALL remaining packages have dependencies that have not been met. This may point to ' +
-                chalk_1.default.red('circular dependencies.'));
-            console.log('Already built: ' +
-                Array.from(done)
-                    .map((p) => chalk_1.default.green(p.packageName))
-                    .join(', '));
-            console.log(chalk_1.default.blue('\nTo solve this issue') + ': find the circular dependencies below and fix the dependencies:\n\n');
-            //TODO: actually find and name the packages that have circular dependencies
-            // let circular = [];
-            // lincdPackages.forEach((pkg) => {
-            //   if (!done.has(pkg))
-            //   {
-            //     let deps = dependencies.get(pkg);
-            //     if (deps.some(dependency => {
-            //       //return true if this dependency (indirectly) depends on the package whos' dependency it is
-            //       return hasDependency(dependency,pkg,dependencies)
-            //     }))
-            //     {
-            //       circular.push(pkg);
-            //     }
-            //     process.exit();
-            //   }
-            // });
-            lincdPackages.forEach((pkg) => {
-                let deps = dependencies.get(pkg);
-                if (!done.has(pkg)) {
-                    console.log(chalk_1.default.red(pkg.packageName) +
-                        ' has not been built yet. Unbuilt dependencies:\n' +
-                        deps
-                            .filter((dependency) => {
-                            return !Array.from(done).some((p) => {
-                                // console.log(p.packageName,dependency.packageName,p===dependency)
-                                return p === dependency;
-                            });
-                        })
-                            .map((p) => chalk_1.default.red('\t- ' + ((p === null || p === void 0 ? void 0 : p.packageName) ? p.packageName : p.toString()) + '\n'))
-                            .join(' '));
-                    // console.log(chalk.red(pkg.packageName)+' has not been built yet. Built dependencies:\n' + deps.filter(dependency => {
-                    //   return Array.from(done).some(p => p.packageName === pkg.packageName)
-                    // }).map(p => chalk.green('\t- '+p.packageName+'\n')).join(" "))
-                    // console.log(chalk.red(pkg.packageName)+' has not been built yet. Built dependencies:\n' + deps.filter(dependency => done.has(pkg)).map(p => chalk.green('\t- '+p.packageName+'\n')).join(" "))
-                }
-            });
-        }
-        //if more to be built, iterate
-        if (stack.length > 0) {
-            return runStack(stack);
-        }
-        else {
-            onStackEnd(dependencies, results.filter(Boolean));
-        }
+      }
+      //if more to be built, iterate
+      if (stack.length > 0) {
+        return runStack(stack);
+      } else {
+        onStackEnd(dependencies, results.filter(Boolean));
+      }
     });
-    //starts the process
-    runStack(startStack);
+  //starts the process
+  runStack(startStack);
 }
+
 function hasDependency(pkg, childPkg, dependencies, depth = 1) {
-    console.log('Does ' + pkg.packageName + ' have dep ' + childPkg.packageName + ' ?');
-    let deps = dependencies.get(pkg);
-    if (deps.some((dependency) => {
-        console.log(dependency.packageName, childPkg.packageName, dependency === childPkg);
-        if (depth === 2)
-            return false;
-        // return dependency === childPkg;
-        return dependency === childPkg || hasDependency(dependency, childPkg, dependencies, depth++);
-    })) {
-        console.log('##YES');
-        return true;
-    }
-    console.log('going up');
-    return false;
+  console.log('Does ' + pkg.packageName + ' have dep ' + childPkg.packageName + ' ?');
+  let deps = dependencies.get(pkg);
+  if (
+    deps.some((dependency) => {
+      console.log(dependency.packageName, childPkg.packageName, dependency === childPkg);
+      if (depth === 2) return false;
+      // return dependency === childPkg;
+      return dependency === childPkg || hasDependency(dependency, childPkg, dependencies, depth++);
+    })
+  ) {
+    console.log('##YES');
+    return true;
+  }
+  console.log('going up');
+  return false;
 }
+
 function buildAll(target, target2, target3) {
-    console.log('Building all LINCD packages of this repository in order of dependencies');
-    let lincdPackages = getLocalLincdPackageMap();
-    let startFrom;
-    //by default start building
-    let building = true;
-    //option to start from a specific package in the stack
-    if (target == 'from') {
-        startFrom = target2;
-        //if we have a startFrom, then we havnt started the build process yet
-        building = startFrom ? false : true;
-        //clear targets
-        target = '';
-        target2 = '';
-        console.log(chalk_1.default.blue('Will skip builds until ' + startFrom));
-        // return async (pkg) => {};
-    }
-    if (target2 == 'from') {
-        startFrom = target3;
-        //if we have a startFrom, then we havnt started the build process yet
-        building = startFrom ? false : true;
-        //clear targets
-        target2 = '';
-        target3 = '';
-        console.log(chalk_1.default.blue('Will skip builds until ' + startFrom));
-        // return async (pkg) => {};
-    }
-    let done = new Set();
-    let failedModules = [];
-    progressUpdate(lincdPackages.size + ' packages left');
-    let packagesLeft = lincdPackages.size;
-    // let packagesLeft = lincdPackages.size - done.size;
-    runOnPackagesGroupedByDependencies(lincdPackages, (packageGroup, dependencies) => {
-        if (done.size > 0) {
-            debugInfo(chalk_1.default.magenta('\n-------\nThese packages are next, since all their dependencies have now been build:'));
-            // log(stack);
-        }
-        debugInfo('Now building: ' + chalk_1.default.blue(packageGroup.map((i) => i.packageName)));
-        return (pkg) => __awaiter(this, void 0, void 0, function* () {
-            let command;
-            let skipping = false;
-            //if we're skipping builds until a certain package
-            if (!building) {
-                //if the package name matches the package we're supposed to start from then start building packages
-                if (pkg.packageName == startFrom || pkg.packageName == startFrom) {
-                    building = true;
-                }
-                //else still waiting for the package
-                else {
-                    log(chalk_1.default.blue('skipping ' + pkg.packageName));
-                    command = Promise.resolve(true);
-                    skipping = true;
-                }
+  console.log('Building all LINCD packages of this repository in order of dependencies');
+  let lincdPackages = getLocalLincdPackageMap();
+  let startFrom;
+  //by default start building
+  let building = true;
+  //option to start from a specific package in the stack
+  if (target == 'from') {
+    startFrom = target2;
+    //if we have a startFrom, then we havnt started the build process yet
+    building = startFrom ? false : true;
+    //clear targets
+    target = '';
+    target2 = '';
+    console.log(chalk_1.default.blue('Will skip builds until ' + startFrom));
+    // return async (pkg) => {};
+  }
+  if (target2 == 'from') {
+    startFrom = target3;
+    //if we have a startFrom, then we havnt started the build process yet
+    building = startFrom ? false : true;
+    //clear targets
+    target2 = '';
+    target3 = '';
+    console.log(chalk_1.default.blue('Will skip builds until ' + startFrom));
+    // return async (pkg) => {};
+  }
+  let done = new Set();
+  let failedModules = [];
+  progressUpdate(lincdPackages.size + ' packages left');
+  let packagesLeft = lincdPackages.size;
+  // let packagesLeft = lincdPackages.size - done.size;
+  runOnPackagesGroupedByDependencies(
+    lincdPackages,
+    (packageGroup, dependencies) => {
+      if (done.size > 0) {
+        debugInfo(
+          chalk_1.default.magenta(
+            '\n-------\nThese packages are next, since all their dependencies have now been build:',
+          ),
+        );
+        // log(stack);
+      }
+      debugInfo('Now building: ' + chalk_1.default.blue(packageGroup.map((i) => i.packageName)));
+      return (pkg) =>
+        __awaiter(this, void 0, void 0, function* () {
+          let command;
+          let skipping = false;
+          //if we're skipping builds until a certain package
+          if (!building) {
+            //if the package name matches the package we're supposed to start from then start building packages
+            if (pkg.packageName == startFrom || pkg.packageName == startFrom) {
+              building = true;
             }
-            //unless told otherwise, build the package
-            if (!command) {
-                command = (0, utils_1.execPromise)('cd ' +
-                    pkg.path +
-                    ' && yarn exec lincd build' +
-                    (target ? ' ' + target : '') +
-                    (target2 ? ' ' + target2 : ''), false, false, {}, false);
-                debugInfo(chalk_1.default.cyan('Building ' + pkg.packageName));
+            //else still waiting for the package
+            else {
+              log(chalk_1.default.blue('skipping ' + pkg.packageName));
+              command = Promise.resolve(true);
+              skipping = true;
             }
-            return command
-                .catch(({ error, stdout, stderr }) => {
-                //this prints out the webpack output, including the build errors
-                warn('Failed to build ' + pkg.packageName);
-                console.log(stdout);
-                failedModules.push(pkg.packageName);
-                let dependentModules = getDependentPackages(dependencies, pkg);
-                if (dependentModules.length > 0) {
-                    printBuildResults(failedModules, done);
-                    console.log(chalk_1.default.magenta('Stopping build process because an error occurred whilst building ' +
-                        pkg.packageName +
-                        ', which ' +
-                        dependentModules.length +
-                        ' other packages depend on.')); //"+dependentModules.map(d => d.packageName).join(", ")));
-                    console.log(chalk_1.default.cyanBright('tip ') +
-                        'Run ' +
-                        chalk_1.default.green(`lincd build-all from ${pkg.packageName}`) +
-                        ' to build only the remaining packages'); //"+dependentModules.map(d => d.packageName).join(", ")));
-                    process.exit(1);
-                }
+          }
+          //unless told otherwise, build the package
+          if (!command) {
+            command = (0, utils_1.execPromise)(
+              'cd ' +
+                pkg.path +
+                ' && yarn exec lincd build' +
+                (target ? ' ' + target : '') +
+                (target2 ? ' ' + target2 : ''),
+              false,
+              false,
+              {},
+              false,
+            );
+            debugInfo(chalk_1.default.cyan('Building ' + pkg.packageName));
+          }
+          return command
+            .catch(({error, stdout, stderr}) => {
+              //this prints out the webpack output, including the build errors
+              warn('Failed to build ' + pkg.packageName);
+              console.log(stdout);
+              failedModules.push(pkg.packageName);
+              let dependentModules = getDependentPackages(dependencies, pkg);
+              if (dependentModules.length > 0) {
+                printBuildResults(failedModules, done);
+                console.log(
+                  chalk_1.default.magenta(
+                    'Stopping build process because an error occurred whilst building ' +
+                      pkg.packageName +
+                      ', which ' +
+                      dependentModules.length +
+                      ' other packages depend on.',
+                  ),
+                ); //"+dependentModules.map(d => d.packageName).join(", ")));
+                console.log(
+                  chalk_1.default.cyanBright('tip ') +
+                    'Run ' +
+                    chalk_1.default.green(`lincd build-all from ${pkg.packageName}`) +
+                    ' to build only the remaining packages',
+                ); //"+dependentModules.map(d => d.packageName).join(", ")));
+                process.exit(1);
+              }
             })
-                .then((res) => {
-                if (!skipping) {
-                    log(chalk_1.default.green('Built ' + pkg.packageName));
-                }
-                done.add(pkg);
-                packagesLeft--;
-                // log(chalk.magenta(packagesLeft + ' packages left'));
-                process.stdout.write(packagesLeft + ' packages left\r');
-                if (packagesLeft == 0) {
-                    printBuildResults(failedModules, done);
-                }
-                return res;
+            .then((res) => {
+              if (!skipping) {
+                log(chalk_1.default.green('Built ' + pkg.packageName));
+              }
+              done.add(pkg);
+              packagesLeft--;
+              // log(chalk.magenta(packagesLeft + ' packages left'));
+              process.stdout.write(packagesLeft + ' packages left\r');
+              if (packagesLeft == 0) {
+                printBuildResults(failedModules, done);
+              }
+              return res;
             });
         });
-    }, (dependencies) => {
-        //if no more packages to build but we never started building...
-        if (!building) {
-            console.log(chalk_1.default.red('Could not find the package to start from. Please provide a correct package name or package name to build from'));
-        }
-        else {
-            //Detecting cyclical dependencies that caused some packages not to be build
-            let first = true;
-            lincdPackages.forEach((pkg) => {
-                if (!done.has(pkg)) {
-                    let deps = dependencies.get(pkg);
-                    if (first) {
-                        console.log(chalk_1.default.red('CYCLICAL DEPENDENCIES? - could not build some packages because they depend on each other.'));
-                        first = false;
-                    }
-                    //print the cyclical dependencies
-                    console.log(chalk_1.default.red(pkg.packageName) +
-                        ' depends on ' +
-                        deps
-                            .filter((dependency) => {
-                            return typeof dependency !== 'string';
-                        })
-                            .map((d) => {
-                            return done.has(d) ? d.packageName : chalk_1.default.red(d.packageName);
-                        })
-                            .join(', '));
-                    //also print some information why these packages have not been moved into the stack
-                    let stringDependencies = deps.filter((d) => typeof d === 'string');
-                    if (stringDependencies.length > 0) {
-                        console.log(chalk_1.default.red('And it depends on these package(s) - which seem not to be proper packages :' +
-                            stringDependencies.join(', ')));
-                        console.log(chalk_1.default.red('Could you remove this from dependencies? Should it be a devDependency?'));
-                    }
-                }
-            });
-        }
-    });
+    },
+    (dependencies) => {
+      //if no more packages to build but we never started building...
+      if (!building) {
+        console.log(
+          chalk_1.default.red(
+            'Could not find the package to start from. Please provide a correct package name or package name to build from',
+          ),
+        );
+      } else {
+        //Detecting cyclical dependencies that caused some packages not to be build
+        let first = true;
+        lincdPackages.forEach((pkg) => {
+          if (!done.has(pkg)) {
+            let deps = dependencies.get(pkg);
+            if (first) {
+              console.log(
+                chalk_1.default.red(
+                  'CYCLICAL DEPENDENCIES? - could not build some packages because they depend on each other.',
+                ),
+              );
+              first = false;
+            }
+            //print the cyclical dependencies
+            console.log(
+              chalk_1.default.red(pkg.packageName) +
+                ' depends on ' +
+                deps
+                  .filter((dependency) => {
+                    return typeof dependency !== 'string';
+                  })
+                  .map((d) => {
+                    return done.has(d) ? d.packageName : chalk_1.default.red(d.packageName);
+                  })
+                  .join(', '),
+            );
+            //also print some information why these packages have not been moved into the stack
+            let stringDependencies = deps.filter((d) => typeof d === 'string');
+            if (stringDependencies.length > 0) {
+              console.log(
+                chalk_1.default.red(
+                  'And it depends on these package(s) - which seem not to be proper packages :' +
+                    stringDependencies.join(', '),
+                ),
+              );
+              console.log(
+                chalk_1.default.red('Could you remove this from dependencies? Should it be a devDependency?'),
+              );
+            }
+          }
+        });
+      }
+    },
+  );
 }
+
 exports.buildAll = buildAll;
+
 function getDependentPackages(dependencies, pkg) {
-    let dependentModules = [];
-    dependencies.forEach((dModuleDependencies, dModule) => {
-        if (dModuleDependencies.indexOf(pkg) !== -1) {
-            dependentModules.push(dModule);
-        }
-    });
-    return dependentModules;
+  let dependentModules = [];
+  dependencies.forEach((dModuleDependencies, dModule) => {
+    if (dModuleDependencies.indexOf(pkg) !== -1) {
+      dependentModules.push(dModule);
+    }
+  });
+  return dependentModules;
 }
+
 /**
  * Returns a map of the packages that this repository manages (so no packages found through the workspaces who's path contains ../ )
  * @param rootPath
  */
 function getLocalLincdPackageMap(rootPath = './') {
-    let map = new Map();
-    getLincdPackages(rootPath).forEach((pkg) => {
-        if (pkg.path.indexOf('../') === -1 && pkg.path.indexOf('..\\') === -1) {
-            // console.log(package.path);
-            map.set(pkg.packageName, pkg);
-        }
-    });
-    return map;
+  let map = new Map();
+  getLincdPackages(rootPath).forEach((pkg) => {
+    if (pkg.path.indexOf('../') === -1 && pkg.path.indexOf('..\\') === -1) {
+      // console.log(package.path);
+      map.set(pkg.packageName, pkg);
+    }
+  });
+  return map;
 }
+
 function getLocalLincdModules(rootPath = './') {
-    return getLincdPackages(rootPath).filter((pkg) => {
-        return pkg.path.indexOf('..\\') === -1;
-    });
+  return getLincdPackages(rootPath).filter((pkg) => {
+    return pkg.path.indexOf('..\\') === -1;
+  });
 }
+
 function getLincdPackages(rootPath = process.cwd()) {
-    let pack = (0, utils_1.getPackageJSON)();
-    if (!pack || !pack.workspaces) {
-        for (let i = 0; i <= 3; i++) {
-            rootPath = path_1.default.join(process.cwd(), ...Array(i).fill('..'));
-            pack = (0, utils_1.getPackageJSON)(rootPath);
-            if (pack && pack.workspaces) {
-                // log('Found workspace at '+packagePath);
-                break;
-            }
-        }
-    }
-    if (!pack || !pack.workspaces) {
-        warn(chalk_1.default.red('Could not find package workspaces. Make sure you run this command from a yarn workspace.'));
-        logHelp();
-        process.exit();
+  let pack = (0, utils_1.getPackageJSON)();
+  if (!pack || !pack.workspaces) {
+    for (let i = 0; i <= 3; i++) {
+      rootPath = path_1.default.join(process.cwd(), ...Array(i).fill('..'));
+      pack = (0, utils_1.getPackageJSON)(rootPath);
+      if (pack && pack.workspaces) {
+        // log('Found workspace at '+packagePath);
+        break;
+      }
     }
-    // console.log(pack.workspaces);
-    let res = [];
-    checkWorkspaces(rootPath, pack.workspaces, res);
-    return res;
+  }
+  if (!pack || !pack.workspaces) {
+    warn(
+      chalk_1.default.red('Could not find package workspaces. Make sure you run this command from a yarn workspace.'),
+    );
+    logHelp();
+    process.exit();
+  }
+  // console.log(pack.workspaces);
+  let res = [];
+  checkWorkspaces(rootPath, pack.workspaces, res);
+  return res;
 }
+
 exports.getLincdPackages = getLincdPackages;
+
 function setVariable(name, replacement) {
-    //prepare name for regexp
-    name = name.replace(/[-[\]{}()*+?.,\\^$|#\s]/g, '\\$&');
-    variables[name] = replacement;
+  //prepare name for regexp
+  name = name.replace(/[-[\]{}()*+?.,\\^$|#\s]/g, '\\$&');
+  variables[name] = replacement;
 }
-var replaceVariablesInFile = (filePath) => __awaiter(void 0, void 0, void 0, function* () {
+
+var replaceVariablesInFile = (filePath) =>
+  __awaiter(void 0, void 0, void 0, function* () {
     var fileContent = yield fs_extra_1.default.readFile(filePath, 'utf8').catch((err) => {
-        console.warn(chalk_1.default.red('Could not read file ' + filePath));
+      console.warn(chalk_1.default.red('Could not read file ' + filePath));
     });
     if (fileContent) {
-        var newContent = replaceCurlyVariables(fileContent);
-        return fs_extra_1.default.writeFile(filePath, newContent);
-    }
-    else {
-        return Promise.resolve();
+      var newContent = replaceCurlyVariables(fileContent);
+      return fs_extra_1.default.writeFile(filePath, newContent);
+    } else {
+      return Promise.resolve();
     }
-});
+  });
 var replaceCurlyVariables = function (string) {
-    // var reg = new RegExp('\\$\\{'+key+'\\}','g');
-    for (var key in variables) {
-        string = string.replace(new RegExp('\\$\\{' + key + '\\}', 'g'), variables[key]);
-    }
-    return string;
+  // var reg = new RegExp('\\$\\{'+key+'\\}','g');
+  for (var key in variables) {
+    string = string.replace(new RegExp('\\$\\{' + key + '\\}', 'g'), variables[key]);
+  }
+  return string;
 };
 const capitalize = (str) => str.charAt(0).toUpperCase() + str.toLowerCase().slice(1);
 const camelCase = (str) => {
-    let string = str.replace(/[^A-Za-z0-9]/g, ' ').split(' ');
-    if (string.length > 1) {
-        return string.reduce((result, word) => result + capitalize(word));
-    }
-    return str;
+  let string = str.replace(/[^A-Za-z0-9]/g, ' ').split(' ');
+  if (string.length > 1) {
+    return string.reduce((result, word) => result + capitalize(word));
+  }
+  return str;
 };
-const createOntology = (prefix, uriBase, basePath = process.cwd()) => __awaiter(void 0, void 0, void 0, function* () {
+const createOntology = (prefix, uriBase, basePath = process.cwd()) =>
+  __awaiter(void 0, void 0, void 0, function* () {
     if (!prefix) {
-        console.warn('Please provide a suggested prefix as the first argument');
-        return;
+      console.warn('Please provide a suggested prefix as the first argument');
+      return;
     }
     let sourceFolder = getSourceFolder(basePath);
     let targetFolder = ensureFolderExists(sourceFolder, 'ontologies');
     if (!uriBase) {
-        uriBase = 'http://lincd.org/ont/' + prefix + '/';
+      uriBase = 'http://lincd.org/ont/' + prefix + '/';
     }
     setVariable('uri_base', uriBase);
-    let { hyphenName, camelCaseName, underscoreName } = (0, exports.setNameVariables)(prefix);
+    let {hyphenName, camelCaseName, underscoreName} = (0, exports.setNameVariables)(prefix);
     //copy ontology accessor file
     log("Creating files for ontology '" + prefix + "'");
     let targetFile = path_1.default.join(targetFolder, hyphenName + '.ts');
-    fs_extra_1.default.copySync(path_1.default.join(__dirname, '..', 'defaults', 'package', 'src', 'ontologies', 'example-ontology.ts'), targetFile);
+    fs_extra_1.default.copySync(
+      path_1.default.join(__dirname, '..', 'defaults', 'package', 'src', 'ontologies', 'example-ontology.ts'),
+      targetFile,
+    );
     //copy data files
     let targetDataFile = path_1.default.join(targetFolder, '..', 'data', hyphenName + '.json');
     let targetDataFile2 = path_1.default.join(targetFolder, '..', 'data', hyphenName + '.json.d.ts');
-    fs_extra_1.default.copySync(path_1.default.join(__dirname, '..', 'defaults', 'package', 'src', 'data', 'example-ontology.json'), targetDataFile);
-    fs_extra_1.default.copySync(path_1.default.join(__dirname, '..', 'defaults', 'package', 'src', 'data', 'example-ontology.json.d.ts'), targetDataFile2);
+    fs_extra_1.default.copySync(
+      path_1.default.join(__dirname, '..', 'defaults', 'package', 'src', 'data', 'example-ontology.json'),
+      targetDataFile,
+    );
+    fs_extra_1.default.copySync(
+      path_1.default.join(__dirname, '..', 'defaults', 'package', 'src', 'data', 'example-ontology.json.d.ts'),
+      targetDataFile2,
+    );
     yield replaceVariablesInFiles(targetFile, targetDataFile, targetDataFile2);
-    log(`Prepared a new ontology data files in ${chalk_1.default.magenta(targetDataFile.replace(basePath, ''))}`, `And an ontology accessor file in ${chalk_1.default.magenta(targetFile.replace(basePath, ''))}`);
+    log(
+      `Prepared a new ontology data files in ${chalk_1.default.magenta(targetDataFile.replace(basePath, ''))}`,
+      `And an ontology accessor file in ${chalk_1.default.magenta(targetFile.replace(basePath, ''))}`,
+    );
     //if this is not a lincd app (but a lincd package instead)
     if (!sourceFolder.includes('frontend')) {
-        //then also add an import to index
-        let indexPath = addLineToIndex(`import './ontologies/${hyphenName}';`, 'ontologies');
-        log(`Added an import of this file from ${chalk_1.default.magenta(indexPath)}`);
+      //then also add an import to index
+      let indexPath = addLineToIndex(`import './ontologies/${hyphenName}';`, 'ontologies');
+      log(`Added an import of this file from ${chalk_1.default.magenta(indexPath)}`);
     }
-});
+  });
 exports.createOntology = createOntology;
 const addLineToIndex = function (line, insertMatchString) {
-    //import ontology in index
-    let indexPath = ['index.ts', 'index.tsx']
-        .map((f) => path_1.default.join('src', f))
-        .find((indexFileName) => {
-        return fs_extra_1.default.existsSync(indexFileName);
+  //import ontology in index
+  let indexPath = ['index.ts', 'index.tsx']
+    .map((f) => path_1.default.join('src', f))
+    .find((indexFileName) => {
+      return fs_extra_1.default.existsSync(indexFileName);
     });
-    if (indexPath) {
-        let indexContents = fs_extra_1.default.readFileSync(indexPath, 'utf-8');
-        let lines = indexContents.split(/\n/g);
-        let newContents;
-        for (var key in lines) {
-            if (lines[key].indexOf(insertMatchString) !== -1) {
-                //remove lines after this line and insert new line in its place
-                lines[key] += `\n${line}`;
-                newContents = lines.join('\n');
-                // log("Found at "+key,lines,newContents);
-                break;
-            }
-        }
-        if (!newContents) {
-            newContents = indexContents + `\n${line}`;
-            // log("Added at end",newContents);
-        }
-        fs_extra_1.default.writeFileSync(indexPath, newContents);
+  if (indexPath) {
+    let indexContents = fs_extra_1.default.readFileSync(indexPath, 'utf-8');
+    let lines = indexContents.split(/\n/g);
+    let newContents;
+    for (var key in lines) {
+      if (lines[key].indexOf(insertMatchString) !== -1) {
+        //remove lines after this line and insert new line in its place
+        lines[key] += `\n${line}`;
+        newContents = lines.join('\n');
+        // log("Found at "+key,lines,newContents);
+        break;
+      }
+    }
+    if (!newContents) {
+      newContents = indexContents + `\n${line}`;
+      // log("Added at end",newContents);
     }
-    return indexPath;
+    fs_extra_1.default.writeFileSync(indexPath, newContents);
+  }
+  return indexPath;
 };
 const replaceVariablesInFiles = function (...files) {
-    return Promise.all(files.map((file) => {
-        return replaceVariablesInFile(file);
-    }));
+  return Promise.all(
+    files.map((file) => {
+      return replaceVariablesInFile(file);
+    }),
+  );
 };
 const replaceVariablesInFolder = function (folder) {
-    //get all files in folder, including files that start with a dot
-    glob(folder + '/**/*', { dot: true, nodir: true }, function (err, files) {
-        if (err) {
-            console.log('Error', err);
-        }
-        else {
-            // console.log(files);
-            return Promise.all(files.map((file) => {
-                return replaceVariablesInFile(file);
-            }));
-        }
-    });
+  //get all files in folder, including files that start with a dot
+  glob(folder + '/**/*', {dot: true, nodir: true}, function (err, files) {
+    if (err) {
+      console.log('Error', err);
+    } else {
+      // console.log(files);
+      return Promise.all(
+        files.map((file) => {
+          return replaceVariablesInFile(file);
+        }),
+      );
+    }
+  });
 };
 const replaceVariablesInFilesWithRoot = function (root, ...files) {
-    return replaceVariablesInFiles(...files.map((f) => path_1.default.join(root, f)));
+  return replaceVariablesInFiles(...files.map((f) => path_1.default.join(root, f)));
 };
 const hasYarnInstalled = function () {
-    return __awaiter(this, void 0, void 0, function* () {
-        let version = (yield (0, utils_1.execPromise)('yarn --version').catch((err) => {
-            console.log('yarn probably not working');
-            return '';
-        }));
-        return version.toString().match(/[0-9]+/);
+  return __awaiter(this, void 0, void 0, function* () {
+    let version = yield (0, utils_1.execPromise)('yarn --version').catch((err) => {
+      console.log('yarn probably not working');
+      return '';
     });
+    return version.toString().match(/[0-9]+/);
+  });
 };
 const ensureFolderExists = function (...folders) {
-    let target;
-    folders.forEach((folder) => {
-        target = target ? path_1.default.join(target, folder) : path_1.default.join(folder);
-        if (!fs_extra_1.default.existsSync(target)) {
-            fs_extra_1.default.mkdirSync(target);
-        }
-    });
-    return target;
-    /*let targetFolder = path.join(...folders);
-    let parentDirectory = folders.slice(0, folders.length - 1);
-    if (!fs.existsSync(targetFolder)) {
-      if (fs.existsSync(path.join(...parentDirectory))) {
-        fs.mkdirSync(targetFolder);
-      } else {
-        warn(
-          `Please run this command from the root of your package. This command expects ${parentDirectory.toString()} to exists from that folder`,
-        );
-      }
+  let target;
+  folders.forEach((folder) => {
+    target = target ? path_1.default.join(target, folder) : path_1.default.join(folder);
+    if (!fs_extra_1.default.existsSync(target)) {
+      fs_extra_1.default.mkdirSync(target);
+    }
+  });
+  return target;
+  /*let targetFolder = path.join(...folders);
+  let parentDirectory = folders.slice(0, folders.length - 1);
+  if (!fs.existsSync(targetFolder)) {
+    if (fs.existsSync(path.join(...parentDirectory))) {
+      fs.mkdirSync(targetFolder);
+    } else {
+      warn(
+        `Please run this command from the root of your package. This command expects ${parentDirectory.toString()} to exists from that folder`,
+      );
     }
-    return targetFolder;*/
+  }
+  return targetFolder;*/
 };
 const setNameVariables = function (name) {
-    let hyphenName = name.replace(/[-_\s]+/g, '-');
-    let camelCaseName = camelCase(name); //some-package --> someModule
-    let underscoreName = name.replace(/[-\s]+/g, '_');
-    let plainName = name.replace(/[-\s]+/g, '');
-    //longer similar variables names should come before the shorter ones
-    setVariable('underscore_name', underscoreName);
-    setVariable('hyphen_name', hyphenName);
-    setVariable('camel_name', camelCaseName);
-    setVariable('name', name);
-    setVariable('plain_name', plainName);
-    return { hyphenName, camelCaseName, underscoreName, plainName };
+  let hyphenName = name.replace(/[-_\s]+/g, '-');
+  let camelCaseName = camelCase(name); //some-package --> someModule
+  let underscoreName = name.replace(/[-\s]+/g, '_');
+  let plainName = name.replace(/[-\s]+/g, '');
+  //longer similar variables names should come before the shorter ones
+  setVariable('underscore_name', underscoreName);
+  setVariable('hyphen_name', hyphenName);
+  setVariable('camel_name', camelCaseName);
+  setVariable('name', name);
+  setVariable('plain_name', plainName);
+  return {hyphenName, camelCaseName, underscoreName, plainName};
 };
 exports.setNameVariables = setNameVariables;
+
 function getSourceFolder(basePath = process.cwd()) {
-    //LINCD App
-    if (fs_extra_1.default.existsSync(path_1.default.join(basePath, 'frontend', 'src'))) {
-        return path_1.default.join(basePath, 'frontend', 'src');
-    }
-    //LINCD package
-    if (fs_extra_1.default.existsSync(path_1.default.join(basePath, 'src'))) {
-        return path_1.default.join(basePath, 'src');
-    }
-    else {
-        console.warn('Cannot find source folder');
-        return path_1.default.join(basePath, 'src');
-    }
+  //LINCD App
+  if (fs_extra_1.default.existsSync(path_1.default.join(basePath, 'frontend', 'src'))) {
+    return path_1.default.join(basePath, 'frontend', 'src');
+  }
+  //LINCD package
+  if (fs_extra_1.default.existsSync(path_1.default.join(basePath, 'src'))) {
+    return path_1.default.join(basePath, 'src');
+  } else {
+    console.warn('Cannot find source folder');
+    return path_1.default.join(basePath, 'src');
+  }
 }
-const createShape = (name, basePath = process.cwd()) => __awaiter(void 0, void 0, void 0, function* () {
+
+const createShape = (name, basePath = process.cwd()) =>
+  __awaiter(void 0, void 0, void 0, function* () {
     let sourceFolder = getSourceFolder(basePath);
     let targetFolder = ensureFolderExists(sourceFolder, 'shapes');
-    let { hyphenName, camelCaseName, underscoreName } = (0, exports.setNameVariables)(name);
+    let {hyphenName, camelCaseName, underscoreName} = (0, exports.setNameVariables)(name);
     //copy default shape file
     // log("Creating files for shape '" + name + "'");
     let targetFile = path_1.default.join(targetFolder, hyphenName + '.ts');
@@ -684,14 +860,15 @@ const createShape = (name, basePath = process.cwd()) => __awaiter(void 0, void 0
     //if this is NOT a lincd app (but a lincd package)
     let indexPath;
     if (!sourceFolder.includes('frontend')) {
-        indexPath = addLineToIndex(`import './shapes/${hyphenName}';`, 'shapes');
-        log(`Added an import of this file from ${chalk_1.default.magenta(indexPath)}`);
+      indexPath = addLineToIndex(`import './shapes/${hyphenName}';`, 'shapes');
+      log(`Added an import of this file from ${chalk_1.default.magenta(indexPath)}`);
     }
-});
+  });
 exports.createShape = createShape;
-const createSetComponent = (name, basePath = process.cwd()) => __awaiter(void 0, void 0, void 0, function* () {
+const createSetComponent = (name, basePath = process.cwd()) =>
+  __awaiter(void 0, void 0, void 0, function* () {
     let targetFolder = ensureFolderExists(basePath, 'src', 'components');
-    let { hyphenName, camelCaseName, underscoreName } = (0, exports.setNameVariables)(name);
+    let {hyphenName, camelCaseName, underscoreName} = (0, exports.setNameVariables)(name);
     //copy default shape file
     log("Creating files for set component '" + name + "'");
     let targetFile = path_1.default.join(targetFolder, hyphenName + '.tsx');
@@ -701,13 +878,18 @@ const createSetComponent = (name, basePath = process.cwd()) => __awaiter(void 0,
     //replace variables in some of the copied files
     yield replaceVariablesInFiles(targetFile, targetFile2);
     let indexPath = addLineToIndex(`import './components/${hyphenName}';`, 'components');
-    log(`Created a new set component in ${chalk_1.default.magenta(targetFile.replace(basePath, ''))}`, `Created a new stylesheet in ${chalk_1.default.magenta(targetFile2.replace(basePath, ''))}`, `Added an import of this file from ${chalk_1.default.magenta(indexPath)}`);
-});
+    log(
+      `Created a new set component in ${chalk_1.default.magenta(targetFile.replace(basePath, ''))}`,
+      `Created a new stylesheet in ${chalk_1.default.magenta(targetFile2.replace(basePath, ''))}`,
+      `Added an import of this file from ${chalk_1.default.magenta(indexPath)}`,
+    );
+  });
 exports.createSetComponent = createSetComponent;
-const createComponent = (name, basePath = process.cwd()) => __awaiter(void 0, void 0, void 0, function* () {
+const createComponent = (name, basePath = process.cwd()) =>
+  __awaiter(void 0, void 0, void 0, function* () {
     let sourceFolder = getSourceFolder(basePath);
     let targetFolder = ensureFolderExists(sourceFolder, 'components');
-    let { hyphenName, camelCaseName, underscoreName } = (0, exports.setNameVariables)(name);
+    let {hyphenName, camelCaseName, underscoreName} = (0, exports.setNameVariables)(name);
     //copy default shape file
     log("Creating files for component '" + name + "'");
     let targetFile = path_1.default.join(targetFolder, hyphenName + '.tsx');
@@ -716,52 +898,57 @@ const createComponent = (name, basePath = process.cwd()) => __awaiter(void 0, vo
     fs_extra_1.default.copySync(path_1.default.join(__dirname, '..', 'defaults', 'component.scss'), targetFile2);
     //replace variables in some of the copied files
     yield replaceVariablesInFiles(targetFile, targetFile2);
-    log(`Created a new component template in ${chalk_1.default.magenta(targetFile.replace(basePath, ''))}`, `Created component stylesheet template in ${chalk_1.default.magenta(targetFile2.replace(basePath, ''))}`);
+    log(
+      `Created a new component template in ${chalk_1.default.magenta(targetFile.replace(basePath, ''))}`,
+      `Created component stylesheet template in ${chalk_1.default.magenta(targetFile2.replace(basePath, ''))}`,
+    );
     //if this is not a lincd app (but a lincd package instead)
     if (!sourceFolder.includes('frontend')) {
-        //then also add an import to index
-        let indexPath = addLineToIndex(`import './components/${hyphenName}';`, 'components');
-        log(`Added an import of this file from ${chalk_1.default.magenta(indexPath)}`);
+      //then also add an import to index
+      let indexPath = addLineToIndex(`import './components/${hyphenName}';`, 'components');
+      log(`Added an import of this file from ${chalk_1.default.magenta(indexPath)}`);
     }
-});
+  });
 exports.createComponent = createComponent;
-const depCheck = () => __awaiter(void 0, void 0, void 0, function* () {
+const depCheck = () =>
+  __awaiter(void 0, void 0, void 0, function* () {
     (0, depcheck_1.default)(process.cwd(), {}, (results) => {
-        if (results.missing) {
-            let missing = Object.keys(results.missing);
-            //currently react is not an explicit dependency, but we should add it as a peer dependency
-            missing.splice(missing.indexOf('react'));
-            if (missing.length > 0) {
-                console.warn(chalk_1.default.red('Missing dependencies:\n\t' + missing.join(',\n\t')));
-            }
+      if (results.missing) {
+        let missing = Object.keys(results.missing);
+        //currently react is not an explicit dependency, but we should add it as a peer dependency
+        missing.splice(missing.indexOf('react'));
+        if (missing.length > 0) {
+          console.warn(chalk_1.default.red('Missing dependencies:\n\t' + missing.join(',\n\t')));
         }
-        // if(Object.keys(results.invalidFiles).length > 0) {
-        //   console.warn(chalk.red("Invalid files:\n")+Object.keys(results.invalidFiles).join(",\n"));
-        // }
-        // if(Object.keys(results.invalidDirs).length > 0) {
-        //   console.warn(chalk.red("Invalid dirs:\n")+results.invalidDirs.toString());
-        // }
-        // if(results.unused) {
-        //   console.warn("Unused dependencies: "+results.missing.join(", "));
-        // }
+      }
+      // if(Object.keys(results.invalidFiles).length > 0) {
+      //   console.warn(chalk.red("Invalid files:\n")+Object.keys(results.invalidFiles).join(",\n"));
+      // }
+      // if(Object.keys(results.invalidDirs).length > 0) {
+      //   console.warn(chalk.red("Invalid dirs:\n")+results.invalidDirs.toString());
+      // }
+      // if(results.unused) {
+      //   console.warn("Unused dependencies: "+results.missing.join(", "));
+      // }
     });
-});
+  });
 exports.depCheck = depCheck;
-const createPackage = (name, uriBase, basePath = process.cwd()) => __awaiter(void 0, void 0, void 0, function* () {
+const createPackage = (name, uriBase, basePath = process.cwd()) =>
+  __awaiter(void 0, void 0, void 0, function* () {
     //if ran with npx, basePath will be the root directory of the repository, even if we're executing from a sub folder (the root directory is where node_modules lives and package.json with workspaces)
     //so we manually find a packages folder, if it exists we go into that.
     if (fs_extra_1.default.existsSync(path_1.default.join(basePath, 'packages'))) {
-        basePath = path_1.default.join(basePath, 'packages');
+      basePath = path_1.default.join(basePath, 'packages');
     }
     if (!name) {
-        console.warn('Please provide a name as the first argument');
-        return;
+      console.warn('Please provide a name as the first argument');
+      return;
     }
     //let's remove scope for variable names
     let [packageName, scope, cleanPackageName] = name.match(/(@[\w\-]+\/)?([\w\-]+)/);
     let targetFolder = ensureFolderExists(basePath, cleanPackageName);
     if (!uriBase) {
-        uriBase = 'http://lincd.org/ont/' + name;
+      uriBase = 'http://lincd.org/ont/' + name;
     }
     setVariable('uri_base', uriBase + '/');
     //find @scope and the next part between 2 slashes after
@@ -773,11 +960,12 @@ const createPackage = (name, uriBase, basePath = process.cwd()) => __awaiter(voi
     setVariable('package_name', name);
     //extra variable for clarity (will be same as 'name')
     setVariable('output_file_name', name);
-    let { hyphenName, camelCaseName, underscoreName } = (0, exports.setNameVariables)(cleanPackageName);
+    let {hyphenName, camelCaseName, underscoreName} = (0, exports.setNameVariables)(cleanPackageName);
     log("Creating new LINCD package '" + name + "'");
     fs_extra_1.default.copySync(path_1.default.join(__dirname, '..', 'defaults', 'package'), targetFolder);
     //replace variables in some of the copied files
-    yield Promise.all([
+    yield Promise.all(
+      [
         'src/index.ts',
         'package.json',
         'Gruntfile.js',
@@ -785,49 +973,61 @@ const createPackage = (name, uriBase, basePath = process.cwd()) => __awaiter(voi
         'src/shapes/ExampleShapeClass.ts',
         'src/ontologies/example-ontology.ts',
         'src/data/example-ontology.json',
-    ]
+      ]
         .map((f) => path_1.default.join(targetFolder, f))
         .map((file) => {
-        return replaceVariablesInFile(file);
-    }));
+          return replaceVariablesInFile(file);
+        }),
+    );
     //rename these to a file name similar to the pkg name
     [
-        'src/ontologies/example-ontology.ts',
-        'src/data/example-ontology.json',
-        'src/data/example-ontology.json.d.ts',
+      'src/ontologies/example-ontology.ts',
+      'src/data/example-ontology.json',
+      'src/data/example-ontology.json.d.ts',
     ].forEach((f) => {
-        let parts = f.split('/');
-        let newParts = [...parts];
-        let [name, ...extensions] = newParts.pop().split('.');
-        let newName = hyphenName + '.' + extensions.join('.');
-        console.log('rename ', path_1.default.join(targetFolder, f), path_1.default.join(targetFolder, ...newParts, newName));
-        fs_extra_1.default.renameSync(path_1.default.join(targetFolder, f), path_1.default.join(targetFolder, ...newParts, newName));
+      let parts = f.split('/');
+      let newParts = [...parts];
+      let [name, ...extensions] = newParts.pop().split('.');
+      let newName = hyphenName + '.' + extensions.join('.');
+      console.log(
+        'rename ',
+        path_1.default.join(targetFolder, f),
+        path_1.default.join(targetFolder, ...newParts, newName),
+      );
+      fs_extra_1.default.renameSync(
+        path_1.default.join(targetFolder, f),
+        path_1.default.join(targetFolder, ...newParts, newName),
+      );
+    });
+    let version = yield (0, utils_1.execPromise)('yarn --version').catch((err) => {
+      console.log('yarn probably not working');
+      return '';
     });
-    let version = (yield (0, utils_1.execPromise)('yarn --version').catch((err) => {
-        console.log('yarn probably not working');
-        return '';
-    }));
     let installCommand = version.toString().match(/[0-9]+/) ? 'yarn install' : 'npm install';
     yield (0, utils_1.execp)(`cd ${targetFolder} && ${installCommand} && npm exec lincd build`, true).catch((err) => {
-        console.warn('Could not install dependencies');
+      console.warn('Could not install dependencies');
     });
-    log(`Prepared a new LINCD package in ${chalk_1.default.magenta(targetFolder)}`, `Run ${chalk_1.default.blueBright('yarn build')} from this directory to build once`, `Or ${chalk_1.default.blueBright('yarn dev')} to continuously rebuild on file changes`);
-});
+    log(
+      `Prepared a new LINCD package in ${chalk_1.default.magenta(targetFolder)}`,
+      `Run ${chalk_1.default.blueBright('yarn build')} from this directory to build once`,
+      `Or ${chalk_1.default.blueBright('yarn dev')} to continuously rebuild on file changes`,
+    );
+  });
 exports.createPackage = createPackage;
 var getNextVersion = function (version) {
-    let parts = version.split('.');
-    return parts[0] + '.' + parts[1] + '.' + (parseInt(parts[2]) + 1).toString();
+  let parts = version.split('.');
+  return parts[0] + '.' + parts[1] + '.' + (parseInt(parts[2]) + 1).toString();
 };
 var getNextMajorVersion = function (version) {
-    let parts = version.split('.');
-    return (parseInt(parts[0]) + 1).toString() + '.0.0';
+  let parts = version.split('.');
+  return (parseInt(parts[0]) + 1).toString() + '.0.0';
 };
 var getNextMinorVersion = function (version) {
-    let parts = version.split('.');
-    return parts[0] + '.' + (parseInt(parts[1]) + 1).toString() + '.0';
+  let parts = version.split('.');
+  return parts[0] + '.' + (parseInt(parts[1]) + 1).toString() + '.0';
 };
 var buildFailed = function (output) {
-    return output.indexOf('Aborted due to warnings') !== -1 && output.indexOf('Command failed') !== -1;
+  return output.indexOf('Aborted due to warnings') !== -1 && output.indexOf('Command failed') !== -1;
 };
 /*program.command('shapes').action(async () => {
     //we've imported require-extensions from npm so that we can use this
@@ -867,67 +1067,67 @@ var buildFailed = function (output) {
     }
 });*/
 const register = function (registryURL) {
-    if (fs_extra_1.default.existsSync(process.cwd() + '/package.json')) {
-        var pack = JSON.parse(fs_extra_1.default.readFileSync(process.cwd() + '/package.json', 'utf8'));
-        let version = pack.version;
-        let packageName = pack.name;
-        // let author = pack.author;
-        // let description = pack.description;
-        //
-        // let authorName = pack.author;
-        // if (pack.author.name) {
-        //   authorName = pack.author.name;
-        // }
-        console.log(chalk_1.default.cyan('registering package ' + packageName + ' ' + version + ' in the LINCD registry'));
-        return fetch(registryURL + '/register', {
-            method: 'POST',
-            headers: {
-                Accept: 'application/json, text/plain, */*',
-                'Content-Type': 'application/json',
-            },
-            body: JSON.stringify({ package: packageName, version }),
-            // body: JSON.stringify({package: packageName, version, author}),
-        })
-            .then((res) => res.json())
-            .then((json) => {
-            if (json.error) {
-                console.log(chalk_1.default.red('Response: ' + json.error));
-            }
-            else if (json.result) {
-                console.log(chalk_1.default.blueBright('Response: ') + json.result);
-                if (json.warning) {
-                    console.log(chalk_1.default.red('Warning: ') + json.warning);
-                }
-            }
-        })
-            .catch((err) => {
-            console.warn(chalk_1.default.red('Warning: ') + 'Could not connect to LINCD registry');
-        });
-    }
-    else {
-        console.warn(chalk_1.default.red('Warning:') + ' not found: ' + process.cwd() + '/package.json');
-    }
+  if (fs_extra_1.default.existsSync(process.cwd() + '/package.json')) {
+    var pack = JSON.parse(fs_extra_1.default.readFileSync(process.cwd() + '/package.json', 'utf8'));
+    let version = pack.version;
+    let packageName = pack.name;
+    // let author = pack.author;
+    // let description = pack.description;
+    //
+    // let authorName = pack.author;
+    // if (pack.author.name) {
+    //   authorName = pack.author.name;
+    // }
+    console.log(chalk_1.default.cyan('registering package ' + packageName + ' ' + version + ' in the LINCD registry'));
+    return fetch(registryURL + '/register', {
+      method: 'POST',
+      headers: {
+        Accept: 'application/json, text/plain, */*',
+        'Content-Type': 'application/json',
+      },
+      body: JSON.stringify({package: packageName, version}),
+      // body: JSON.stringify({package: packageName, version, author}),
+    })
+      .then((res) => res.json())
+      .then((json) => {
+        if (json.error) {
+          console.log(chalk_1.default.red('Response: ' + json.error));
+        } else if (json.result) {
+          console.log(chalk_1.default.blueBright('Response: ') + json.result);
+          if (json.warning) {
+            console.log(chalk_1.default.red('Warning: ') + json.warning);
+          }
+        }
+      })
+      .catch((err) => {
+        console.warn(chalk_1.default.red('Warning: ') + 'Could not connect to LINCD registry');
+      });
+  } else {
+    console.warn(chalk_1.default.red('Warning:') + ' not found: ' + process.cwd() + '/package.json');
+  }
 };
 exports.register = register;
-const buildMetadata = () => __awaiter(void 0, void 0, void 0, function* () {
+const buildMetadata = () =>
+  __awaiter(void 0, void 0, void 0, function* () {
     // require('@babel/register')({extensions: ['js', '.ts', '.tsx']});
     //NOTE: we can not rely on the LincdWebApp shape from lincd-server here, because that would make the initial build of all modules a lot trickier
     //see, CLI needs to be built as one of the first things in order to build other things. So it cannot rely on lincd-server, which relies on 10 other packages
     let app;
     //set the URL of the app as the URI of its node
     let envVars = yield (0, env_cmd_1.GetEnvVars)({
-        envFile: {
-            filePath: '.env-cmdrc.json',
-        },
+      envFile: {
+        filePath: '.env-cmdrc.json',
+      },
     });
     if (envVars[process.env.NODE_ENV] && envVars[process.env.NODE_ENV].SITE_ROOT) {
-        //get the site root of the current environment
-        app = models_1.NamedNode.getOrCreate(envVars[process.env.NODE_ENV].SITE_ROOT);
-    }
-    else {
-        warn('Cannot find environment variable SITE_ROOT. Make sure SITE_ROOT is set (likely in .env-cmdrc.json) for the current environment: ' +
-            process.env.NODE_ENV);
-        app = models_1.NamedNode.create();
+      //get the site root of the current environment
+      app = models_1.NamedNode.getOrCreate(envVars[process.env.NODE_ENV].SITE_ROOT);
+    } else {
+      warn(
+        'Cannot find environment variable SITE_ROOT. Make sure SITE_ROOT is set (likely in .env-cmdrc.json) for the current environment: ' +
+          process.env.NODE_ENV,
+      );
+      app = models_1.NamedNode.create();
     }
     let updatedPaths = [];
     var localPackagePaths = getLocalPackagePaths();
@@ -935,609 +1135,679 @@ const buildMetadata = () => __awaiter(void 0, void 0, void 0, function* () {
     let metadataFolder = path_1.default.join(process.cwd(), 'data', 'metadata');
     yield fs_extra_1.default.ensureDir(metadataFolder); //{recursive:true} but not needed with fs-extra
     for (const [packageCodeName, packagePath, lincdPackagePath, isAppPackage] of localPackagePaths) {
-        let errors = false;
-        //TODO: check if this resolves, if not, skip it (for initial setup)
-        Promise.resolve().then(() => __importStar(require('lincd-modules/lib/scripts/package-metadata.js'))).then((script) => __awaiter(void 0, void 0, void 0, function* () {
-            yield script.getPackageMetadata(packagePath, lincdPackagePath).then((response) => __awaiter(void 0, void 0, void 0, function* () {
+      let errors = false;
+      //TODO: check if this resolves, if not, skip it (for initial setup)
+      Promise.resolve()
+        .then(() => __importStar(require('lincd-modules/lib/scripts/package-metadata.js')))
+        .then((script) =>
+          __awaiter(void 0, void 0, void 0, function* () {
+            yield script.getPackageMetadata(packagePath, lincdPackagePath).then((response) =>
+              __awaiter(void 0, void 0, void 0, function* () {
                 if (response.errors.length > 0) {
-                    // console.log(JSON.stringify(response));
-                    warn('Error processing ' + packagePath + ':\n' + response.errors.join('\n'));
-                    // throw response
-                    errors = true;
+                  // console.log(JSON.stringify(response));
+                  warn('Error processing ' + packagePath + ':\n' + response.errors.join('\n'));
+                  // throw response
+                  errors = true;
+                } else {
+                  if (!response.packageUri) {
+                    console.warn('No package URI from meta data. Not building meta data for this package');
+                    return;
+                  }
+                  let pkgNode = models_1.NamedNode.getOrCreate(response.packageUri);
+                  //connect the packages to the app
+                  let lincdApp = (0, NameSpace_1.createNameSpace)('http://lincd.org/ont/lincd-app/');
+                  Prefix_1.Prefix.add('lincdApp', 'http://lincd.org/ont/lincd-app/');
+                  if (isAppPackage) {
+                    //Note: this needs to match with LincdWebApp.ownPackage accessor;
+                    app.overwrite(lincdApp('ownPackage'), pkgNode);
+                  } else {
+                    //Note: this needs to match with LincdWebApp.packages accessor;
+                    app.set(lincdApp('maintainsPackage'), pkgNode);
+                  }
+                  //write this graph to a jsonld file
+                  let packageMetaData = JSON.stringify(response.result, null, 2);
+                  let metadataFile = path_1.default.join(metadataFolder, packageCodeName + '.json');
+                  yield fs_extra_1.default.writeFile(metadataFile, packageMetaData).then(() => {
+                    updatedPaths.push(metadataFile);
+                  });
                 }
-                else {
-                    if (!response.packageUri) {
-                        console.warn('No package URI from meta data. Not building meta data for this package');
-                        return;
-                    }
-                    let pkgNode = models_1.NamedNode.getOrCreate(response.packageUri);
-                    //connect the packages to the app
-                    let lincdApp = (0, NameSpace_1.createNameSpace)('http://lincd.org/ont/lincd-app/');
-                    Prefix_1.Prefix.add('lincdApp', 'http://lincd.org/ont/lincd-app/');
-                    if (isAppPackage) {
-                        //Note: this needs to match with LincdWebApp.ownPackage accessor;
-                        app.overwrite(lincdApp('ownPackage'), pkgNode);
-                    }
-                    else {
-                        //Note: this needs to match with LincdWebApp.packages accessor;
-                        app.set(lincdApp('maintainsPackage'), pkgNode);
-                    }
-                    //write this graph to a jsonld file
-                    let packageMetaData = JSON.stringify(response.result, null, 2);
-                    let metadataFile = path_1.default.join(metadataFolder, packageCodeName + '.json');
-                    yield fs_extra_1.default.writeFile(metadataFile, packageMetaData).then(() => {
-                        updatedPaths.push(metadataFile);
-                    });
-                }
-            }));
-        }));
-        //enable this when testing if you don't want to continue with building other metadata when an errors occur
-        // if (errors) break;
+              }),
+            );
+          }),
+        );
+      //enable this when testing if you don't want to continue with building other metadata when an errors occur
+      // if (errors) break;
     }
     let packageMetaData = yield JSONLDWriter_1.JSONLDWriter.stringify(app, process.env.NODE_ENV === 'development');
     let metadataFile = path_1.default.join(metadataFolder, '_app.json');
     yield fs_extra_1.default.writeFile(metadataFile, packageMetaData).then(() => {
-        updatedPaths.push(metadataFile);
+      updatedPaths.push(metadataFile);
     });
     return updatedPaths;
-});
+  });
 exports.buildMetadata = buildMetadata;
+
 function getLocalPackagePaths() {
-    let packagePaths = [];
-    //add the APP package itself
-    let appPackagePath = process.cwd();
-    let appLincdPackagePath = path_1.default.join(appPackagePath, 'frontend', 'src', 'package.ts');
-    if (fs_extra_1.default.existsSync(appPackagePath)) {
-        let packageJSON = (0, utils_1.getPackageJSON)(appPackagePath);
-        packagePaths.push([packageJSON.name, appPackagePath, appLincdPackagePath, true]);
-    }
-    else {
-        console.log('Not a LINCD app');
-    }
-    //NOTE: we could also switch to checking 'workspaces'?
-    let packagesFolder = path_1.default.join(process.cwd(), 'packages');
-    if (fs_extra_1.default.existsSync(packagesFolder)) {
-        let localPackages = fs_extra_1.default.readdirSync(packagesFolder);
-        localPackages.forEach((packageFolderName) => {
-            packagePaths.push([
-                packageFolderName,
-                path_1.default.join(packagesFolder, packageFolderName),
-                path_1.default.join(packagesFolder, packageFolderName, 'lib', 'package.js'),
-            ]);
-        });
-    }
-    return packagePaths;
+  let packagePaths = [];
+  //add the APP package itself
+  let appPackagePath = process.cwd();
+  let appLincdPackagePath = path_1.default.join(appPackagePath, 'frontend', 'src', 'package.ts');
+  if (fs_extra_1.default.existsSync(appPackagePath)) {
+    let packageJSON = (0, utils_1.getPackageJSON)(appPackagePath);
+    packagePaths.push([packageJSON.name, appPackagePath, appLincdPackagePath, true]);
+  } else {
+    console.log('Not a LINCD app');
+  }
+  //NOTE: we could also switch to checking 'workspaces'?
+  let packagesFolder = path_1.default.join(process.cwd(), 'packages');
+  if (fs_extra_1.default.existsSync(packagesFolder)) {
+    let localPackages = fs_extra_1.default.readdirSync(packagesFolder);
+    localPackages.forEach((packageFolderName) => {
+      packagePaths.push([
+        packageFolderName,
+        path_1.default.join(packagesFolder, packageFolderName),
+        path_1.default.join(packagesFolder, packageFolderName, 'lib', 'package.js'),
+      ]);
+    });
+  }
+  return packagePaths;
 }
+
 const buildPackage = (target, target2, packagePath = process.cwd(), logResults = true) => {
-    if (target == 'production' || target == 'es5' || target == 'es6' || !target) {
-        if (!fs_extra_1.default.existsSync(path_1.default.join(packagePath, 'Gruntfile.js'))) {
-            console.warn(`No Gruntfile found at ${packagePath}\\Gruntfile.js. Cannot build.`);
-            return;
-        }
-        var nodeEnv = '';
-        if (target == 'production') {
-            if (!(target2 == 'es5' || target2 == 'es6' || typeof target2 == 'undefined')) {
-                console.warn('unknown second build target. Use es5 or es6', target2);
-                return;
-            }
-            var isWindows = /^win/.test(process.platform);
-            if (isWindows) {
-                nodeEnv = 'SET NODE_ENV=production&& ';
-            }
-            else {
-                nodeEnv = "NODE_ENV='production' ";
-            }
-        }
-        if (!target) {
-            target = 'es6';
-        }
-        log('building once: ' +
-            nodeEnv +
-            'grunt build' +
-            (target ? '-' + target : '') +
-            (target2 ? '-' + target2 : '') +
-            ' --color');
-        let method = logResults ? utils_1.execp : utils_1.execPromise;
-        //execute the command to build the method, and provide the current work directory as option
-        return method(nodeEnv + 'grunt build' + (target ? '-' + target : '') + (target2 ? '-' + target2 : '') + ' --color', false, false, { cwd: packagePath }).catch((err) => {
-            process.exit(1);
-        });
+  if (target == 'production' || target == 'es5' || target == 'es6' || !target) {
+    if (!fs_extra_1.default.existsSync(path_1.default.join(packagePath, 'Gruntfile.js'))) {
+      console.warn(`No Gruntfile found at ${packagePath}\\Gruntfile.js. Cannot build.`);
+      return;
     }
-    else {
-        console.warn('unknown build target. Use es5, es6 or production.');
+    var nodeEnv = '';
+    if (target == 'production') {
+      if (!(target2 == 'es5' || target2 == 'es6' || typeof target2 == 'undefined')) {
+        console.warn('unknown second build target. Use es5 or es6', target2);
+        return;
+      }
+      var isWindows = /^win/.test(process.platform);
+      if (isWindows) {
+        nodeEnv = 'SET NODE_ENV=production&& ';
+      } else {
+        nodeEnv = "NODE_ENV='production' ";
+      }
+    }
+    if (!target) {
+      target = 'es6';
     }
+    log(
+      'building once: ' +
+        nodeEnv +
+        'grunt build' +
+        (target ? '-' + target : '') +
+        (target2 ? '-' + target2 : '') +
+        ' --color',
+    );
+    let method = logResults ? utils_1.execp : utils_1.execPromise;
+    //execute the command to build the method, and provide the current work directory as option
+    return method(
+      nodeEnv + 'grunt build' + (target ? '-' + target : '') + (target2 ? '-' + target2 : '') + ' --color',
+      false,
+      false,
+      {cwd: packagePath},
+    ).catch((err) => {
+      process.exit(1);
+    });
+  } else {
+    console.warn('unknown build target. Use es5, es6 or production.');
+  }
 };
 exports.buildPackage = buildPackage;
 const getLastBuildTime = (packagePath) => {
-    return getLastModifiedFile(packagePath + '/@(builds|lib|dist)/**/*.js');
+  return getLastModifiedFile(packagePath + '/@(builds|lib|dist)/**/*.js');
 };
 const getLastModifiedSourceTime = (packagePath) => {
-    return getLastModifiedFile(packagePath + '/@(src|data|scss)/**/*', {
-        ignore: [packagePath + '/**/*.scss.json', packagePath + '/**/*.d.ts'],
-    });
+  return getLastModifiedFile(packagePath + '/@(src|data|scss)/**/*', {
+    ignore: [packagePath + '/**/*.scss.json', packagePath + '/**/*.d.ts'],
+  });
 };
 const getLastCommitTime = (packagePath) => {
-    // console.log(`git log -1 --format=%ci -- ${packagePath}`);
-    // process.exit();
-    return (0, utils_1.execPromise)(`git log -1 --format="%h %ci" -- ${packagePath}`)
-        .then((result) => __awaiter(void 0, void 0, void 0, function* () {
+  // console.log(`git log -1 --format=%ci -- ${packagePath}`);
+  // process.exit();
+  return (0, utils_1.execPromise)(`git log -1 --format="%h %ci" -- ${packagePath}`)
+    .then((result) =>
+      __awaiter(void 0, void 0, void 0, function* () {
         let commitId = result.substring(0, result.indexOf(' '));
         let date = result.substring(commitId.length + 1);
         let lastCommitDate = new Date(date);
         let changes = yield (0, utils_1.execPromise)(`git show --stat --oneline ${commitId} -- ${packagePath}`);
         // log(packagePath,result,lastCommit);
         // log(changes);
-        return { date: lastCommitDate, changes, commitId };
-    }))
-        .catch(({ error, stdout, stderr }) => {
-        debugInfo(chalk_1.default.red('Git error: ') + error.message.toString());
-        return null;
+        return {date: lastCommitDate, changes, commitId};
+      }),
+    )
+    .catch(({error, stdout, stderr}) => {
+      debugInfo(chalk_1.default.red('Git error: ') + error.message.toString());
+      return null;
     });
 };
 const getLastModifiedFile = (filePath, config = {}) => {
-    var files = glob.sync(filePath, config);
-    // console.log(files.join(" - "));
-    var lastModifiedName;
-    var lastModified;
-    var lastModifiedTime = 0;
-    files.forEach((fileName) => {
-        if (fs_extra_1.default.lstatSync(fileName).isDirectory()) {
-            // console.log("skipping directory "+fileName);
-            return;
-        }
-        let mtime = fs_extra_1.default.statSync(path_1.default.join(fileName)).mtime;
-        let modifiedTime = mtime.getTime();
-        if (modifiedTime > lastModifiedTime) {
-            // console.log(fileName,mtime);
-            lastModifiedName = fileName;
-            lastModified = mtime;
-            lastModifiedTime = modifiedTime;
-        }
-    });
-    return { lastModified, lastModifiedName, lastModifiedTime };
+  var files = glob.sync(filePath, config);
+  // console.log(files.join(" - "));
+  var lastModifiedName;
+  var lastModified;
+  var lastModifiedTime = 0;
+  files.forEach((fileName) => {
+    if (fs_extra_1.default.lstatSync(fileName).isDirectory()) {
+      // console.log("skipping directory "+fileName);
+      return;
+    }
+    let mtime = fs_extra_1.default.statSync(path_1.default.join(fileName)).mtime;
+    let modifiedTime = mtime.getTime();
+    if (modifiedTime > lastModifiedTime) {
+      // console.log(fileName,mtime);
+      lastModifiedName = fileName;
+      lastModified = mtime;
+      lastModifiedTime = modifiedTime;
+    }
+  });
+  return {lastModified, lastModifiedName, lastModifiedTime};
 };
 var publishUpdated = function (test = false) {
-    let packages = getLocalLincdModules();
-    var p = Promise.resolve('');
-    let packagesLeft = packages.length;
-    let results = [];
-    log('Checking which packages need to be published by comparing last published date with last git commit');
-    // p = Promise.all(packages.map((pckg) => {
-    packages.forEach((pckg) => {
-        p = p
-            .then((previousResult) => {
-            // progressUpdate(packagesLeft-- + ' packages left. Now checking ' + pckg.packageName);
-            log('# Checking package ' + pckg.packageName);
-            // log('# Requesting ' + 'yarn info '+pkg.packageName+' --json');
-            // return execPromise('yarn info '+pkg.packageName+' --json').then((output:string) => {
-            // console.log("Will be requesting npm view from this current working directory:\n"+process.cwd());
-            // return execPromise('npm view '+pkg.packageName+' --json').then((output:string) => {
-            let shouldPublish;
-            var pack = (0, utils_1.getPackageJSON)(pckg.path);
-            let version = getNextVersion(pack.version);
-            if (pack.private) {
-                shouldPublish = false;
-                debugInfo(chalk_1.default.blue('--> is private, skipping'));
-                return chalk_1.default.gray(pckg.packageName + ' is private');
-                // return previousResult + ' ' + chalk.gray(pckg.packageName + ' is private\n');
-            }
-            console.log('testing npm');
-            return (0, utils_1.execPromise)('npm info ' + pckg.packageName + ' --json')
-                .then((output) => __awaiter(this, void 0, void 0, function* () {
-                console.log('testing npm done');
-                var info;
-                try {
-                    if (output == '' || output.includes('E404')) {
-                        debugInfo('Empty or 404 response from `npm info`. This package was probably not published before');
-                        // throw new Error('Empty response from `yarn info`. This pkg was probably not published before');
-                        // return;
-                        shouldPublish = true;
-                        //don't patch the version number (default, see above), use the current version
-                        version = pack.version;
-                    }
-                    else {
-                        info = JSON.parse(output);
+  let packages = getLocalLincdModules();
+  var p = Promise.resolve('');
+  let packagesLeft = packages.length;
+  let results = [];
+  log('Checking which packages need to be published by comparing last published date with last git commit');
+  // p = Promise.all(packages.map((pckg) => {
+  packages.forEach((pckg) => {
+    p = p
+      .then((previousResult) => {
+        // progressUpdate(packagesLeft-- + ' packages left. Now checking ' + pckg.packageName);
+        log('# Checking package ' + pckg.packageName);
+        // log('# Requesting ' + 'yarn info '+pkg.packageName+' --json');
+        // return execPromise('yarn info '+pkg.packageName+' --json').then((output:string) => {
+        // console.log("Will be requesting npm view from this current working directory:\n"+process.cwd());
+        // return execPromise('npm view '+pkg.packageName+' --json').then((output:string) => {
+        let shouldPublish;
+        var pack = (0, utils_1.getPackageJSON)(pckg.path);
+        let version = getNextVersion(pack.version);
+        if (pack.private) {
+          shouldPublish = false;
+          debugInfo(chalk_1.default.blue('--> is private, skipping'));
+          return chalk_1.default.gray(pckg.packageName + ' is private');
+          // return previousResult + ' ' + chalk.gray(pckg.packageName + ' is private\n');
+        }
+        console.log('testing npm');
+        return (0, utils_1.execPromise)('npm info ' + pckg.packageName + ' --json')
+          .then((output) =>
+            __awaiter(this, void 0, void 0, function* () {
+              console.log('testing npm done');
+              var info;
+              try {
+                if (output == '' || output.includes('E404')) {
+                  debugInfo('Empty or 404 response from `npm info`. This package was probably not published before');
+                  // throw new Error('Empty response from `yarn info`. This pkg was probably not published before');
+                  // return;
+                  shouldPublish = true;
+                  //don't patch the version number (default, see above), use the current version
+                  version = pack.version;
+                } else {
+                  info = JSON.parse(output);
+                }
+                if (info) {
+                  let lastPublish;
+                  //yarn:
+                  // let lastPublish = info.data.time[info.data.version];
+                  lastPublish = info.time[info.version];
+                  // }
+                  // catch (e) {
+                  //   console.log(info);
+                  //   console.error(chalk.red("Could not parse response from npm info. Format may have changed?"));
+                  //   process.exit();
+                  // }
+                  let lastPublishDate = new Date(lastPublish);
+                  // let {lastModifiedTime, lastModifiedName, lastModified} = getLastModifiedSourceTime(pkg.path);
+                  let lastCommitInfo = yield getLastCommitTime(pckg.path);
+                  if (!lastCommitInfo) {
+                    shouldPublish = false;
+                    debugInfo('Could not determine last git commit');
+                    // return previousResult + ' ' + chalk.red(pckg.packageName + ' - could not determine last commit\n');
+                    return chalk_1.default.red(pckg.packageName + ' - could not determine last commit');
+                  } else {
+                    //NOTE: removed lastModified, because switching branches will say that the file was modified and cause everything to publish
+                    //SO: now you NEED TO commit before it picks up that you should publish
+                    shouldPublish = lastPublishDate.getTime() < lastCommitInfo.date.getTime();
+                    //ignore changes to package.json if that's the only change, because when we publish the version number changes, which is then committed
+                    //(note there is always 2 lines for commit info + number of files changed)
+                    let changedFiles = lastCommitInfo.changes.split('\n').filter((line) => line.includes('|'));
+                    let numberOfFilesChanges = changedFiles.length;
+                    // console.log("CHECK "+lastCommitInfo.changes.includes("package.json")+" - "+numberOfFilesChanges)
+                    if (
+                      shouldPublish &&
+                      lastCommitInfo.changes.includes('package.json') &&
+                      numberOfFilesChanges === 1
+                    ) {
+                      shouldPublish = false;
                     }
-                    if (info) {
-                        let lastPublish;
-                        //yarn:
-                        // let lastPublish = info.data.time[info.data.version];
-                        lastPublish = info.time[info.version];
-                        // }
-                        // catch (e) {
-                        //   console.log(info);
-                        //   console.error(chalk.red("Could not parse response from npm info. Format may have changed?"));
-                        //   process.exit();
-                        // }
-                        let lastPublishDate = new Date(lastPublish);
-                        // let {lastModifiedTime, lastModifiedName, lastModified} = getLastModifiedSourceTime(pkg.path);
-                        let lastCommitInfo = yield getLastCommitTime(pckg.path);
-                        if (!lastCommitInfo) {
-                            shouldPublish = false;
-                            debugInfo('Could not determine last git commit');
-                            // return previousResult + ' ' + chalk.red(pckg.packageName + ' - could not determine last commit\n');
-                            return chalk_1.default.red(pckg.packageName + ' - could not determine last commit');
-                        }
-                        else {
-                            //NOTE: removed lastModified, because switching branches will say that the file was modified and cause everything to publish
-                            //SO: now you NEED TO commit before it picks up that you should publish
-                            shouldPublish = lastPublishDate.getTime() < lastCommitInfo.date.getTime();
-                            //ignore changes to package.json if that's the only change, because when we publish the version number changes, which is then committed
-                            //(note there is always 2 lines for commit info + number of files changed)
-                            let changedFiles = lastCommitInfo.changes.split('\n').filter((line) => line.includes('|'));
-                            let numberOfFilesChanges = changedFiles.length;
-                            // console.log("CHECK "+lastCommitInfo.changes.includes("package.json")+" - "+numberOfFilesChanges)
-                            if (shouldPublish && lastCommitInfo.changes.includes('package.json') && numberOfFilesChanges === 1) {
-                                shouldPublish = false;
-                            }
-                            if (shouldPublish) {
-                                log(chalk_1.default.magenta(pckg.packageName) + ' should be published because:');
-                                log(lastPublishDate.toDateString() +
-                                    ' ' +
-                                    lastPublishDate.toTimeString() +
-                                    ' published ' +
-                                    info.version);
-                                log(lastCommitInfo.date.toDateString() +
-                                    ' ' +
-                                    new Date(lastCommitInfo.date).toTimeString() +
-                                    ' source last committed:');
-                                log(lastCommitInfo.changes);
-                            }
-                        }
+                    if (shouldPublish) {
+                      log(chalk_1.default.magenta(pckg.packageName) + ' should be published because:');
+                      log(
+                        lastPublishDate.toDateString() +
+                          ' ' +
+                          lastPublishDate.toTimeString() +
+                          ' published ' +
+                          info.version,
+                      );
+                      log(
+                        lastCommitInfo.date.toDateString() +
+                          ' ' +
+                          new Date(lastCommitInfo.date).toTimeString() +
+                          ' source last committed:',
+                      );
+                      log(lastCommitInfo.changes);
                     }
+                  }
                 }
-                catch (err) {
-                    // var stats = fs.statSync(path.join(packageDirectory));
-                    // var files = fs.readdirSync(path.join(packageDirectory,'src'));
-                    console.log(chalk_1.default.red(pckg.packageName + ' failed: ' + err.message + '\n'));
-                    console.warn('Returned JSON from npm: ' + output);
-                    // return previousResult + ' ' + chalk.red(pckg.packageName + ' failed: ' + err.message + '\n');
-                    return chalk_1.default.red(pckg.packageName + ' failed: ' + err.message);
-                }
-                if (shouldPublish) {
-                    return (0, exports.publishPackage)(pckg, test, info, version);
-                }
-                return chalk_1.default.blue(pckg.packageName) + ' latest version is up to date';
-            }))
-                .catch(({ error, stdout, stderr }) => {
-                if (error) {
-                    console.log(error.message);
-                }
-                if (stdout) {
-                    console.log(stderr);
-                }
-                if (stderr) {
-                    console.log(stderr);
-                }
-                // return previousResult + ' ' + chalk.red(pckg.packageName + ' failed\n');
-                console.warn(chalk_1.default.red(pckg.packageName + ' failed'));
-                return chalk_1.default.red(pckg.packageName + ' failed');
-            });
-        })
-            .then((res) => {
-            log(res);
-            results.push(res);
-        })
-            .catch((err) => {
-            console.warn(chalk_1.default.red(pckg.packageName + ' failed: ' + err.toString()));
-            results.push(chalk_1.default.red(pckg.packageName + ' failed: ' + err.toString()));
-        });
-    });
-    return p.then(() => {
-        // if (messages == '')
-        // {
-        //   console.log('All published packages are already up-to-date.');
-        // }
-        // else
-        // {
-        console.log('Summary:                                \n' + results.join('\n'));
-        // }
-    });
+              } catch (err) {
+                // var stats = fs.statSync(path.join(packageDirectory));
+                // var files = fs.readdirSync(path.join(packageDirectory,'src'));
+                console.log(chalk_1.default.red(pckg.packageName + ' failed: ' + err.message + '\n'));
+                console.warn('Returned JSON from npm: ' + output);
+                // return previousResult + ' ' + chalk.red(pckg.packageName + ' failed: ' + err.message + '\n');
+                return chalk_1.default.red(pckg.packageName + ' failed: ' + err.message);
+              }
+              if (shouldPublish) {
+                return (0, exports.publishPackage)(pckg, test, info, version);
+              }
+              return chalk_1.default.blue(pckg.packageName) + ' latest version is up to date';
+            }),
+          )
+          .catch(({error, stdout, stderr}) => {
+            if (error) {
+              console.log(error.message);
+            }
+            if (stdout) {
+              console.log(stderr);
+            }
+            if (stderr) {
+              console.log(stderr);
+            }
+            // return previousResult + ' ' + chalk.red(pckg.packageName + ' failed\n');
+            console.warn(chalk_1.default.red(pckg.packageName + ' failed'));
+            return chalk_1.default.red(pckg.packageName + ' failed');
+          });
+      })
+      .then((res) => {
+        log(res);
+        results.push(res);
+      })
+      .catch((err) => {
+        console.warn(chalk_1.default.red(pckg.packageName + ' failed: ' + err.toString()));
+        results.push(chalk_1.default.red(pckg.packageName + ' failed: ' + err.toString()));
+      });
+  });
+  return p.then(() => {
+    // if (messages == '')
+    // {
+    //   console.log('All published packages are already up-to-date.');
+    // }
+    // else
+    // {
+    console.log('Summary:                                \n' + results.join('\n'));
+    // }
+  });
 };
 exports.publishUpdated = publishUpdated;
+
 function getEnvJsonPath(relativeToPath = process.cwd()) {
-    return __awaiter(this, void 0, void 0, function* () {
-        let path = '';
-        if (!relativeToPath.endsWith('/')) {
-            relativeToPath += '/';
-        }
-        // let path = './';
-        for (let i = 0; i <= 10; i++) {
-            let envFile = yield (0, get_env_vars_1.getEnvFile)({ filePath: relativeToPath + path + '.env.json' }).catch((err) => {
-                return null;
-            });
-            if (envFile) {
-                //note: we're getting the actual contents here, so we could also use that more directly?
-                return path + '.env.json';
-            }
-            path += '../';
-        }
-    });
+  return __awaiter(this, void 0, void 0, function* () {
+    let path = '';
+    if (!relativeToPath.endsWith('/')) {
+      relativeToPath += '/';
+    }
+    // let path = './';
+    for (let i = 0; i <= 10; i++) {
+      let envFile = yield (0, get_env_vars_1.getEnvFile)({filePath: relativeToPath + path + '.env.json'}).catch(
+        (err) => {
+          return null;
+        },
+      );
+      if (envFile) {
+        //note: we're getting the actual contents here, so we could also use that more directly?
+        return path + '.env.json';
+      }
+      path += '../';
+    }
+  });
 }
+
 var publishPackage = function (pkg, test, info, publishVersion) {
-    return __awaiter(this, void 0, void 0, function* () {
-        if (!pkg) {
-            let localPackageJson = (0, utils_1.getPackageJSON)();
-            pkg = {
-                path: process.cwd(),
-                packageName: localPackageJson.name,
-            };
-        }
-        if (!publishVersion) {
-            publishVersion = info ? getNextVersion(info.version) : 'patch';
-        }
-        if (test) {
-            debugInfo('should publish ' + pkg.packageName + ' ' + publishVersion);
-            //when testing what needs to be published
-            return chalk_1.default.blue(pkg.packageName + ' should publish');
+  return __awaiter(this, void 0, void 0, function* () {
+    if (!pkg) {
+      let localPackageJson = (0, utils_1.getPackageJSON)();
+      pkg = {
+        path: process.cwd(),
+        packageName: localPackageJson.name,
+      };
+    }
+    if (!publishVersion) {
+      publishVersion = info ? getNextVersion(info.version) : 'patch';
+    }
+    if (test) {
+      debugInfo('should publish ' + pkg.packageName + ' ' + publishVersion);
+      //when testing what needs to be published
+      return chalk_1.default.blue(pkg.packageName + ' should publish');
+    }
+    console.log(chalk_1.default.blue('publishing ' + pkg.packageName + ' ' + publishVersion));
+    //looking for an .env.json file in our workspace, which may store our NPM AUTH key
+    let envJsonPath = yield getEnvJsonPath(pkg.path);
+    return (0, utils_1.execPromise)(
+      `cd ${pkg.path} && ${
+        envJsonPath ? `env-cmd -f ${envJsonPath} --use-shell "` : ''
+      }yarn version ${publishVersion} && yarn npm publish${envJsonPath ? `"` : ''}`,
+      true,
+      false,
+      {},
+      true,
+    )
+      .then((res) => {
+        if (
+          res.indexOf('Aborted due to warnings') !== -1 ||
+          res.indexOf('Could not publish') !== -1 ||
+          res.indexOf("Couldn't publish") !== -1
+        ) {
+          console.log(res);
+          return chalk_1.default.red(pkg.packageName + ' failed\n');
         }
-        console.log(chalk_1.default.blue('publishing ' + pkg.packageName + ' ' + publishVersion));
-        //looking for an .env.json file in our workspace, which may store our NPM AUTH key
-        let envJsonPath = yield getEnvJsonPath(pkg.path);
-        return (0, utils_1.execPromise)(`cd ${pkg.path} && ${envJsonPath ? `env-cmd -f ${envJsonPath} --use-shell "` : ''}yarn version ${publishVersion} && yarn npm publish${envJsonPath ? `"` : ''}`, true, false, {}, true)
-            .then((res) => {
-            if (res.indexOf('Aborted due to warnings') !== -1 ||
-                res.indexOf('Could not publish') !== -1 ||
-                res.indexOf("Couldn't publish") !== -1) {
-                console.log(res);
-                return chalk_1.default.red(pkg.packageName + ' failed\n');
-            }
-            console.log('Successfully published ' + chalk_1.default.green(pkg.path) + ' ' + chalk_1.default.magenta(publishVersion));
-            return chalk_1.default.green(pkg.packageName) + ' published ' + chalk_1.default.magenta(publishVersion);
-        })
-            .catch(({ error, stdout, stderr }) => {
-            console.log(chalk_1.default.red('Failed to publish: ' + error.message));
-            return chalk_1.default.red(pkg.packageName + ' failed to publish');
-        });
-    });
+        console.log(
+          'Successfully published ' + chalk_1.default.green(pkg.path) + ' ' + chalk_1.default.magenta(publishVersion),
+        );
+        return chalk_1.default.green(pkg.packageName) + ' published ' + chalk_1.default.magenta(publishVersion);
+      })
+      .catch(({error, stdout, stderr}) => {
+        console.log(chalk_1.default.red('Failed to publish: ' + error.message));
+        return chalk_1.default.red(pkg.packageName + ' failed to publish');
+      });
+  });
 };
 exports.publishPackage = publishPackage;
 var buildUpdated = function (back, target, target2, test = false) {
-    return __awaiter(this, void 0, void 0, function* () {
-        // back = back || 1;
-        // return execPromise(`git log -${back} --format=%ci`).then((result) => {
-        // let now = new Date();
-        let previousResult = '';
-        log(test ? 'Checking which packages need to be rebuild' : 'Building updated packages');
-        // let packages = getLocalLincdModules();
-        let packages = getLocalLincdPackageMap();
-        // console.log(packages);
-        let jsonldPkgUpdated = needsRebuilding(packages.get('lincd-jsonld'));
-        // let cliPkgUpdated = needsRebuilding(packages.get('lincd-cli'));
-        //if either cli or jsonldPkg needs to be rebuilt
-        // if (jsonldPkgUpdated || cliPkgUpdated) {
-        if (jsonldPkgUpdated) {
-            yield (0, utils_1.execPromise)('yarn build-core', false, false, {}, true);
-        }
-        let rebuildAllModules = false;
-        // if (cliPkgUpdated) {
-        //   rebuildAllModules = true;
-        //   log(chalk.magenta('Rebuilding all packages because the build tools (lincd-cli) got updated'));
-        // }
-        let packagesLeft = packages.size;
-        runOnPackagesGroupedByDependencies(packages, (packageGroup, dependencies) => {
-            debugInfo('Now checking: ' + chalk_1.default.blue(packageGroup.map((i) => i.packageName)));
-            debugInfo(packagesLeft + ' packages left.');
-            packagesLeft = packagesLeft - packageGroup.length;
-            return (pkg) => __awaiter(this, void 0, void 0, function* () {
-                // debugInfo('# Checking package ' + pkg.packageName);
-                let needRebuild = needsRebuilding(pkg, true);
-                if (pkg.packageName === 'lincd-jsonld' && jsonldPkgUpdated) {
-                    needRebuild = true;
-                }
-                // console.log(pkg.path,lastModifiedSource.lastModifiedTime,lastModifiedBundle.lastModifiedTime);
-                // console.log(pkg.path,new Date(lastModifiedSource.lastModified).toString(),new Date(lastModifiedBundle.lastModified).toString());
-                if (needRebuild || rebuildAllModules) {
-                    //TODO: when building a pkg, also rebuild all packages that depend on this package.. and iteratively build packages that depend on those packages..
-                    // log(packageName+' modified since last commit on '+now.toString());
-                    if (test) {
-                        debugInfo('Need to build ' + pkg.packageName);
-                        return chalk_1.default.blue(pkg.packageName + ' should be build');
-                    }
-                    log('Building ' + pkg.packageName);
-                    return (0, utils_1.execPromise)('cd ' + pkg.path + ' && yarn build' + (target ? ' ' + target : '') + (target2 ? ' ' + target2 : ''))
-                        .then((res) => {
-                        debugInfo(chalk_1.default.green(pkg.packageName + ' successfully built'));
-                        return chalk_1.default.green(pkg.packageName + ' built');
-                    })
-                        .catch(({ error, stdout, stderr }) => {
-                        warn('Failed to build ' + pkg.packageName);
-                        console.log(stdout);
-                        let dependentModules = getDependentPackages(dependencies, pkg);
-                        if (dependentModules.length > 0) {
-                            // printBuildResults(failedModules, done);
-                            warn(chalk_1.default.red(pkg.packageName + ' build failed'));
-                            warn('Stopping build-updated process because ' +
-                                dependentModules.length +
-                                ' other packages depend on this package.\n'); //"+dependentModules.map(d => d.packageName).join(", ")));
-                            process.exit(1);
-                        }
-                    });
-                }
-            });
-        }, (results) => {
-            if (results.length) {
-                log('Summary:');
-                log(results.join('\n'));
+  return __awaiter(this, void 0, void 0, function* () {
+    // back = back || 1;
+    // return execPromise(`git log -${back} --format=%ci`).then((result) => {
+    // let now = new Date();
+    let previousResult = '';
+    log(test ? 'Checking which packages need to be rebuild' : 'Building updated packages');
+    // let packages = getLocalLincdModules();
+    let packages = getLocalLincdPackageMap();
+    // console.log(packages);
+    let jsonldPkgUpdated = needsRebuilding(packages.get('lincd-jsonld'));
+    // let cliPkgUpdated = needsRebuilding(packages.get('lincd-cli'));
+    //if either cli or jsonldPkg needs to be rebuilt
+    // if (jsonldPkgUpdated || cliPkgUpdated) {
+    if (jsonldPkgUpdated) {
+      yield (0, utils_1.execPromise)('yarn build-core', false, false, {}, true);
+    }
+    let rebuildAllModules = false;
+    // if (cliPkgUpdated) {
+    //   rebuildAllModules = true;
+    //   log(chalk.magenta('Rebuilding all packages because the build tools (lincd-cli) got updated'));
+    // }
+    let packagesLeft = packages.size;
+    runOnPackagesGroupedByDependencies(
+      packages,
+      (packageGroup, dependencies) => {
+        debugInfo('Now checking: ' + chalk_1.default.blue(packageGroup.map((i) => i.packageName)));
+        debugInfo(packagesLeft + ' packages left.');
+        packagesLeft = packagesLeft - packageGroup.length;
+        return (pkg) =>
+          __awaiter(this, void 0, void 0, function* () {
+            // debugInfo('# Checking package ' + pkg.packageName);
+            let needRebuild = needsRebuilding(pkg, true);
+            if (pkg.packageName === 'lincd-jsonld' && jsonldPkgUpdated) {
+              needRebuild = true;
             }
-            else {
-                log(chalk_1.default.green('Nothing to rebuild'));
+            // console.log(pkg.path,lastModifiedSource.lastModifiedTime,lastModifiedBundle.lastModifiedTime);
+            // console.log(pkg.path,new Date(lastModifiedSource.lastModified).toString(),new Date(lastModifiedBundle.lastModified).toString());
+            if (needRebuild || rebuildAllModules) {
+              //TODO: when building a pkg, also rebuild all packages that depend on this package.. and iteratively build packages that depend on those packages..
+              // log(packageName+' modified since last commit on '+now.toString());
+              if (test) {
+                debugInfo('Need to build ' + pkg.packageName);
+                return chalk_1.default.blue(pkg.packageName + ' should be build');
+              }
+              log('Building ' + pkg.packageName);
+              return (0, utils_1.execPromise)(
+                'cd ' + pkg.path + ' && yarn build' + (target ? ' ' + target : '') + (target2 ? ' ' + target2 : ''),
+              )
+                .then((res) => {
+                  debugInfo(chalk_1.default.green(pkg.packageName + ' successfully built'));
+                  return chalk_1.default.green(pkg.packageName + ' built');
+                })
+                .catch(({error, stdout, stderr}) => {
+                  warn('Failed to build ' + pkg.packageName);
+                  console.log(stdout);
+                  let dependentModules = getDependentPackages(dependencies, pkg);
+                  if (dependentModules.length > 0) {
+                    // printBuildResults(failedModules, done);
+                    warn(chalk_1.default.red(pkg.packageName + ' build failed'));
+                    warn(
+                      'Stopping build-updated process because ' +
+                        dependentModules.length +
+                        ' other packages depend on this package.\n',
+                    ); //"+dependentModules.map(d => d.packageName).join(", ")));
+                    process.exit(1);
+                  }
+                });
             }
-        });
-        return;
-        var p = Promise.resolve('');
-        packages.forEach((pkg) => {
-            let packageName = pkg.packageName;
-            p = p
-                .then((previousResult) => {
-                let lastModifiedSource = getLastModifiedSourceTime(pkg.path);
-                let lastModifiedBundle = getLastBuildTime(pkg.path);
-                // console.log(pkg.path,lastModifiedSource.lastModifiedTime,lastModifiedBundle.lastModifiedTime);
-                // console.log(pkg.path,new Date(lastModifiedSource.lastModified).toString(),new Date(lastModifiedBundle.lastModified).toString());
-                debugInfo('# Checking package ' + packageName);
-                if (lastModifiedSource.lastModifiedTime > lastModifiedBundle.lastModifiedTime) {
-                    //TODO: when building a pkg, also rebuild all packages that depend on this package.. and iteratively build packages that depend on those packages..
-                    // log(packageName+' modified since last commit on '+now.toString());
-                    debugInfo(chalk_1.default.cyan('Last modified source: ' +
-                        lastModifiedSource.lastModifiedName +
-                        ' on ' +
-                        lastModifiedSource.lastModified.toString()));
-                    debugInfo(chalk_1.default.cyan('Last build: ' +
-                        (lastModifiedBundle && typeof lastModifiedBundle.lastModified !== 'undefined'
-                            ? lastModifiedBundle.lastModified.toString()
-                            : 'never')));
-                    if (test) {
-                        debugInfo('need to build ' + packageName);
-                    }
-                    else {
-                        log('building ' + packageName);
-                    }
-                    if (!test) {
-                        return (0, utils_1.execPromise)('cd ' + pkg.path + ' && yarn build' + (target ? ' ' + target : '') + (target2 ? ' ' + target2 : '')).then((res) => {
-                            if (res.indexOf('Aborted due to warnings') !== -1 || res.indexOf('Fatal error') !== -1) {
-                                console.log(res);
-                                return previousResult + ' ' + chalk_1.default.red(packageName + ' failed\n');
-                            }
-                            console.log(chalk_1.default.green(packageName + ' successfully built'));
-                            return previousResult + ' ' + chalk_1.default.green(packageName + ' built\n');
-                        });
-                    }
-                    return previousResult + ' ' + chalk_1.default.blue(packageName + ' should be build\n');
-                }
-                return previousResult;
-            })
-                .catch(({ error, stdout, stderr }) => {
-                console.log(stdout);
-                return previousResult + ' ' + chalk_1.default.red(packageName + ' failed\n');
-            });
-        });
-        return p.then((messages) => {
-            if (messages == '') {
-                console.log(chalk_1.default.green('Nothing to rebuild.'));
+          });
+      },
+      (results) => {
+        if (results.length) {
+          log('Summary:');
+          log(results.join('\n'));
+        } else {
+          log(chalk_1.default.green('Nothing to rebuild'));
+        }
+      },
+    );
+    return;
+    var p = Promise.resolve('');
+    packages.forEach((pkg) => {
+      let packageName = pkg.packageName;
+      p = p
+        .then((previousResult) => {
+          let lastModifiedSource = getLastModifiedSourceTime(pkg.path);
+          let lastModifiedBundle = getLastBuildTime(pkg.path);
+          // console.log(pkg.path,lastModifiedSource.lastModifiedTime,lastModifiedBundle.lastModifiedTime);
+          // console.log(pkg.path,new Date(lastModifiedSource.lastModified).toString(),new Date(lastModifiedBundle.lastModified).toString());
+          debugInfo('# Checking package ' + packageName);
+          if (lastModifiedSource.lastModifiedTime > lastModifiedBundle.lastModifiedTime) {
+            //TODO: when building a pkg, also rebuild all packages that depend on this package.. and iteratively build packages that depend on those packages..
+            // log(packageName+' modified since last commit on '+now.toString());
+            debugInfo(
+              chalk_1.default.cyan(
+                'Last modified source: ' +
+                  lastModifiedSource.lastModifiedName +
+                  ' on ' +
+                  lastModifiedSource.lastModified.toString(),
+              ),
+            );
+            debugInfo(
+              chalk_1.default.cyan(
+                'Last build: ' +
+                  (lastModifiedBundle && typeof lastModifiedBundle.lastModified !== 'undefined'
+                    ? lastModifiedBundle.lastModified.toString()
+                    : 'never'),
+              ),
+            );
+            if (test) {
+              debugInfo('need to build ' + packageName);
+            } else {
+              log('building ' + packageName);
             }
-            else {
-                console.log('Summary: \n' + messages);
+            if (!test) {
+              return (0, utils_1.execPromise)(
+                'cd ' + pkg.path + ' && yarn build' + (target ? ' ' + target : '') + (target2 ? ' ' + target2 : ''),
+              ).then((res) => {
+                if (res.indexOf('Aborted due to warnings') !== -1 || res.indexOf('Fatal error') !== -1) {
+                  console.log(res);
+                  return previousResult + ' ' + chalk_1.default.red(packageName + ' failed\n');
+                }
+                console.log(chalk_1.default.green(packageName + ' successfully built'));
+                return previousResult + ' ' + chalk_1.default.green(packageName + ' built\n');
+              });
             }
+            return previousResult + ' ' + chalk_1.default.blue(packageName + ' should be build\n');
+          }
+          return previousResult;
+        })
+        .catch(({error, stdout, stderr}) => {
+          console.log(stdout);
+          return previousResult + ' ' + chalk_1.default.red(packageName + ' failed\n');
         });
-        // });
     });
+    return p.then((messages) => {
+      if (messages == '') {
+        console.log(chalk_1.default.green('Nothing to rebuild.'));
+      } else {
+        console.log('Summary: \n' + messages);
+      }
+    });
+    // });
+  });
 };
 exports.buildUpdated = buildUpdated;
 const needsRebuilding = function (pkg, log = false) {
-    let lastModifiedSource = getLastModifiedSourceTime(pkg.path);
-    let lastModifiedBundle = getLastBuildTime(pkg.path);
-    let result = lastModifiedSource.lastModifiedTime > lastModifiedBundle.lastModifiedTime;
-    if (log) {
-        debugInfo(chalk_1.default.cyan('Last modified source: ' +
-            lastModifiedSource.lastModifiedName +
-            ' on ' +
-            lastModifiedSource.lastModified.toString()));
-        debugInfo(chalk_1.default.cyan('Last build: ' +
-            (lastModifiedBundle && typeof lastModifiedBundle.lastModified !== 'undefined'
-                ? lastModifiedBundle.lastModified.toString()
-                : 'never')));
-    }
-    return result;
+  let lastModifiedSource = getLastModifiedSourceTime(pkg.path);
+  let lastModifiedBundle = getLastBuildTime(pkg.path);
+  let result = lastModifiedSource.lastModifiedTime > lastModifiedBundle.lastModifiedTime;
+  if (log) {
+    debugInfo(
+      chalk_1.default.cyan(
+        'Last modified source: ' +
+          lastModifiedSource.lastModifiedName +
+          ' on ' +
+          lastModifiedSource.lastModified.toString(),
+      ),
+    );
+    debugInfo(
+      chalk_1.default.cyan(
+        'Last build: ' +
+          (lastModifiedBundle && typeof lastModifiedBundle.lastModified !== 'undefined'
+            ? lastModifiedBundle.lastModified.toString()
+            : 'never'),
+      ),
+    );
+  }
+  return result;
 };
 const printBuildResults = function (failed, done) {
-    log('Successfully built: ' + chalk_1.default.green([...done].map((m) => m.packageName).join(', ')) + '\n');
-    if (failed.length > 0) {
-        warn('Failed to build: ' + chalk_1.default.red(failed.join(', ')) + '\n');
-    }
+  log('Successfully built: ' + chalk_1.default.green([...done].map((m) => m.packageName).join(', ')) + '\n');
+  if (failed.length > 0) {
+    warn('Failed to build: ' + chalk_1.default.red(failed.join(', ')) + '\n');
+  }
 };
 var executeCommandForEachPackage = function (packages, command, filterMethod, filterValue) {
-    //if a specific set of packages is given
-    if (filterMethod == 'exclude') {
-        //filter packages, so that we only execute on the packages as provided in the command
-        log('Excluding ' + filterValue);
-        filterValue = filterValue.split(',');
-        packages = packages.filter((pkg) => filterValue.indexOf(pkg.packageName) === -1);
-    }
-    let startFrom;
-    //by default start executing, unless 'from' is given
-    let executing = true;
-    //option to start from a specific pkg in the stack
-    if (filterMethod == 'from') {
-        startFrom = filterValue;
-        if (startFrom) {
-            console.log(chalk_1.default.blue('Will skip ahead to ' + startFrom));
-        }
-        let seen = false;
-        packages = packages.filter((pkg) => {
-            if (!seen && (pkg.packageName == startFrom || pkg.packageName == startFrom)) {
-                seen = true;
-            }
-            return seen;
-        });
+  //if a specific set of packages is given
+  if (filterMethod == 'exclude') {
+    //filter packages, so that we only execute on the packages as provided in the command
+    log('Excluding ' + filterValue);
+    filterValue = filterValue.split(',');
+    packages = packages.filter((pkg) => filterValue.indexOf(pkg.packageName) === -1);
+  }
+  let startFrom;
+  //by default start executing, unless 'from' is given
+  let executing = true;
+  //option to start from a specific pkg in the stack
+  if (filterMethod == 'from') {
+    startFrom = filterValue;
+    if (startFrom) {
+      console.log(chalk_1.default.blue('Will skip ahead to ' + startFrom));
     }
-    log("Executing '" +
-        chalk_1.default.blueBright(command) +
-        "' on packages " +
-        chalk_1.default.magenta(packages.map((m) => m.packageName).join(', ')));
-    var p = Promise.resolve(true);
-    packages.forEach((pkg) => {
-        p = p.then(() => {
-            log('# Package ' + chalk_1.default.magenta(pkg.packageName));
-            return (0, utils_1.execp)('cd ' + pkg.path + ' && ' + command);
-        });
+    let seen = false;
+    packages = packages.filter((pkg) => {
+      if (!seen && (pkg.packageName == startFrom || pkg.packageName == startFrom)) {
+        seen = true;
+      }
+      return seen;
     });
-    return p;
+  }
+  log(
+    "Executing '" +
+      chalk_1.default.blueBright(command) +
+      "' on packages " +
+      chalk_1.default.magenta(packages.map((m) => m.packageName).join(', ')),
+  );
+  var p = Promise.resolve(true);
+  packages.forEach((pkg) => {
+    p = p.then(() => {
+      log('# Package ' + chalk_1.default.magenta(pkg.packageName));
+      return (0, utils_1.execp)('cd ' + pkg.path + ' && ' + command);
+    });
+  });
+  return p;
 };
 exports.executeCommandForEachPackage = executeCommandForEachPackage;
 var gitIgnore = function (...entries) {
-    //add each entry to the .gitignore file
-    let gitIgnorePath = path_1.default.resolve(process.cwd(), '.gitignore');
-    (0, exports.addLinesToFile)(gitIgnorePath, entries);
+  //add each entry to the .gitignore file
+  let gitIgnorePath = path_1.default.resolve(process.cwd(), '.gitignore');
+  (0, exports.addLinesToFile)(gitIgnorePath, entries);
 };
 var addLinesToFile = function (filePath, entries) {
-    let fileContents = fs_extra_1.default.readFileSync(filePath, { encoding: 'utf8' });
-    entries.forEach((entry) => {
-        fileContents += '\n' + entry;
-    });
-    fs_extra_1.default.writeFileSync(filePath, fileContents);
+  let fileContents = fs_extra_1.default.readFileSync(filePath, {encoding: 'utf8'});
+  entries.forEach((entry) => {
+    fileContents += '\n' + entry;
+  });
+  fs_extra_1.default.writeFileSync(filePath, fileContents);
 };
 exports.addLinesToFile = addLinesToFile;
 var addCapacitor = function (basePath = process.cwd()) {
-    return __awaiter(this, void 0, void 0, function* () {
-        let targetFolder = ensureFolderExists(basePath);
-        log('Adding capacitor');
-        fs_extra_1.default.copySync(path_1.default.join(__dirname, '..', 'defaults', 'app-static'), targetFolder);
-        //update .env-cmdrc.json file
-        let envCmdPath = path_1.default.resolve(basePath, '.env-cmdrc.json');
-        let envCmd = JSON.parse(fs_extra_1.default.readFileSync(envCmdPath, { encoding: 'utf8' }));
-        envCmd['static-dev'] = {
-            NODE_ENV: 'production',
-            SITE_ROOT: 'http://localhost:4000',
-            DATA_ROOT: 'http://localhost:4000/data',
-            OUTPUT_PATH: './frontend/web/assets',
-            ASSET_PATH: './assets/',
-            ENTRY_PATH: './frontend/src/index-static.tsx',
-        };
-        fs_extra_1.default.writeFile(envCmdPath, JSON.stringify(envCmd, null, 2));
-        log('Edited .env-cmdrc.json');
-        gitIgnore('android/app/build', 'android/**/capacitor.build.gradle', 'ios/App/App/public', 'ios/App/Podfile');
-        //update package.json scripts
-        let pack = (0, utils_1.getPackageJSON)(basePath);
-        pack.scripts['build-static'] = 'env-cmd -e static-dev node frontend/scripts/build.js';
-        pack.scripts['cap:android'] = 'yarn cap open android';
-        pack.scripts['cap:sync'] = 'yarn cap sync';
-        fs_extra_1.default.writeFile(path_1.default.resolve(basePath, 'package.json'), JSON.stringify(pack, null, 2));
-        log('Added new run script to package.json');
-        yield (0, utils_1.execPromise)(`yarn add -D @capacitor/cli`, true, false, null, true);
-        yield (0, utils_1.execPromise)(`yarn add @capacitor/android @capacitor/core @capacitor/geolocation @capacitor/ios @capacitor/push-notifications`, false, false, null, true);
-        log(`Done! Run ${chalk_1.default.magenta('yarn build-static')} to generate static bundles. Then run ${chalk_1.default.magenta('yarn cap add android')} and/or ${chalk_1.default.magenta('yarn cap add ios')}')`);
-        log(`Also see the app icons in /frontend/web`);
-    });
+  return __awaiter(this, void 0, void 0, function* () {
+    let targetFolder = ensureFolderExists(basePath);
+    log('Adding capacitor');
+    fs_extra_1.default.copySync(path_1.default.join(__dirname, '..', 'defaults', 'app-static'), targetFolder);
+    //update .env-cmdrc.json file
+    let envCmdPath = path_1.default.resolve(basePath, '.env-cmdrc.json');
+    let envCmd = JSON.parse(fs_extra_1.default.readFileSync(envCmdPath, {encoding: 'utf8'}));
+    envCmd['static-dev'] = {
+      NODE_ENV: 'production',
+      SITE_ROOT: 'http://localhost:4000',
+      DATA_ROOT: 'http://localhost:4000/data',
+      OUTPUT_PATH: './frontend/web/assets',
+      ASSET_PATH: './assets/',
+      ENTRY_PATH: './frontend/src/index-static.tsx',
+    };
+    fs_extra_1.default.writeFile(envCmdPath, JSON.stringify(envCmd, null, 2));
+    log('Edited .env-cmdrc.json');
+    gitIgnore('android/app/build', 'android/**/capacitor.build.gradle', 'ios/App/App/public', 'ios/App/Podfile');
+    //update package.json scripts
+    let pack = (0, utils_1.getPackageJSON)(basePath);
+    pack.scripts['build-static'] = 'env-cmd -e static-dev node frontend/scripts/build.js';
+    pack.scripts['cap:android'] = 'yarn cap open android';
+    pack.scripts['cap:sync'] = 'yarn cap sync';
+    fs_extra_1.default.writeFile(path_1.default.resolve(basePath, 'package.json'), JSON.stringify(pack, null, 2));
+    log('Added new run script to package.json');
+    yield (0, utils_1.execPromise)(`yarn add -D @capacitor/cli`, true, false, null, true);
+    yield (0,
+    utils_1.execPromise)(`yarn add @capacitor/android @capacitor/core @capacitor/geolocation @capacitor/ios @capacitor/push-notifications`, false, false, null, true);
+    log(
+      `Done! Run ${chalk_1.default.magenta(
+        'yarn build-static',
+      )} to generate static bundles. Then run ${chalk_1.default.magenta(
+        'yarn cap add android',
+      )} and/or ${chalk_1.default.magenta('yarn cap add ios')}')`,
+    );
+    log(`Also see the app icons in /frontend/web`);
+  });
 };
 exports.addCapacitor = addCapacitor;
 var executeCommandForPackage = function (packageName, command) {
-    let packageDetails = getLincdPackages().find((modDetails) => modDetails.packageName.indexOf(packageName) !== -1 || modDetails.packageName.indexOf(packageName) !== -1);
-    if (packageDetails) {
-        log("Executing 'cd " + packageDetails.path + ' && yarn exec lincd' + (command ? ' ' + command : '') + "'");
-        return (0, utils_1.execp)('cd ' + packageDetails.path + ' && yarn exec lincd' + (command ? ' ' + command : ''));
-    }
-    else {
-        warn("Could not find a pkg who's name (partially) matched " + chalk_1.default.cyan(packageName));
-    }
+  let packageDetails = getLincdPackages().find(
+    (modDetails) =>
+      modDetails.packageName.indexOf(packageName) !== -1 || modDetails.packageName.indexOf(packageName) !== -1,
+  );
+  if (packageDetails) {
+    log("Executing 'cd " + packageDetails.path + ' && yarn exec lincd' + (command ? ' ' + command : '') + "'");
+    return (0, utils_1.execp)('cd ' + packageDetails.path + ' && yarn exec lincd' + (command ? ' ' + command : ''));
+  } else {
+    warn("Could not find a pkg who's name (partially) matched " + chalk_1.default.cyan(packageName));
+  }
 };
 exports.executeCommandForPackage = executeCommandForPackage;