learning-agent 0.2.0 → 0.2.2

package/dist/cli.js

@@ -1,16 +1,35 @@
 #!/usr/bin/env node
-import chalk from 'chalk';
 import { Command } from 'commander';
-import { existsSync, statSync, chmodSync, mkdirSync } from 'fs';
-import * as fs from 'fs/promises';
-import { mkdir, writeFile, readFile, rename, appendFile } from 'fs/promises';
-import { homedir } from 'os';
-import { join, dirname } from 'path';
 import { createHash } from 'crypto';
+import { statSync, existsSync, chmodSync, mkdirSync } from 'fs';
+import { join, dirname } from 'path';
 import Database from 'better-sqlite3';
+import * as fs from 'fs/promises';
+import { readFile, mkdir, appendFile, writeFile, rename } from 'fs/promises';
 import { z } from 'zod';
-import { getLlama, resolveModelFile } from 'node-llama-cpp';
+import chalk from 'chalk';
+import { resolveModelFile, getLlama } from 'node-llama-cpp';
+import { homedir } from 'os';
 
+// src/cli-utils.ts
+function formatBytes(bytes) {
+  if (bytes === 0) return "0 B";
+  if (bytes < 1024) return `${bytes} B`;
+  const kb = bytes / 1024;
+  if (kb < 1024) return `${kb.toFixed(1)} KB`;
+  const mb = kb / 1024;
+  return `${mb.toFixed(1)} MB`;
+}
+function parseLimit(value, name) {
+  const parsed = parseInt(value, 10);
+  if (Number.isNaN(parsed) || parsed <= 0) {
+    throw new Error(`Invalid ${name}: must be a positive integer`);
+  }
+  return parsed;
+}
+function getRepoRoot() {
+  return process.env["LEARNING_AGENT_ROOT"] ?? process.cwd();
+}
 var SourceSchema = z.enum([
   "user_correction",
   "self_correction",
@@ -25,7 +44,23 @@ var PatternSchema = z.object({
   bad: z.string(),
   good: z.string()
 });
+var CitationSchema = z.object({
+  file: z.string().min(1),
+  // Source file path (required, non-empty)
+  line: z.number().int().positive().optional(),
+  // Line number (optional, must be positive)
+  commit: z.string().optional()
+  // Git commit hash (optional)
+});
 var SeveritySchema = z.enum(["high", "medium", "low"]);
+var CompactionLevelSchema = z.union([
+  z.literal(0),
+  // Active
+  z.literal(1),
+  // Flagged (>90 days)
+  z.literal(2)
+  // Archived
+]);
 var LessonTypeSchema = z.enum(["quick", "full"]);
 var LessonSchema = z.object({
   // Core identity (required)
@@ -49,7 +84,20 @@ var LessonSchema = z.object({
   pattern: PatternSchema.optional(),
   // Lifecycle fields (optional)
   deleted: z.boolean().optional(),
-  retrievalCount: z.number().optional()
+  retrievalCount: z.number().optional(),
+  // Provenance tracking (optional)
+  citation: CitationSchema.optional(),
+  // Age-based validity fields (optional)
+  compactionLevel: CompactionLevelSchema.optional(),
+  // 0=active, 1=flagged, 2=archived
+  compactedAt: z.string().optional(),
+  // ISO8601 when compaction happened
+  lastRetrieved: z.string().optional(),
+  // ISO8601 last retrieval time
+  // Invalidation fields (optional - for marking lessons as wrong)
+  invalidatedAt: z.string().optional(),
+  // ISO8601
+  invalidationReason: z.string().optional()
 });
 z.object({
   id: z.string(),
@@ -155,7 +203,15 @@ var SCHEMA_SQL = `
     retrieval_count INTEGER NOT NULL DEFAULT 0,
     last_retrieved TEXT,
     embedding BLOB,
-    content_hash TEXT
+    content_hash TEXT,
+    -- v0.2.2 fields
+    invalidated_at TEXT,
+    invalidation_reason TEXT,
+    citation_file TEXT,
+    citation_line INTEGER,
+    citation_commit TEXT,
+    compaction_level INTEGER DEFAULT 0,
+    compacted_at TEXT
   );
 
   -- FTS5 virtual table for full-text search
@@ -264,6 +320,28 @@ function rowToLesson(row) {
   if (row.retrieval_count > 0) {
     lesson.retrievalCount = row.retrieval_count;
   }
+  if (row.invalidated_at !== null) {
+    lesson.invalidatedAt = row.invalidated_at;
+  }
+  if (row.invalidation_reason !== null) {
+    lesson.invalidationReason = row.invalidation_reason;
+  }
+  if (row.citation_file !== null) {
+    lesson.citation = {
+      file: row.citation_file,
+      ...row.citation_line !== null && { line: row.citation_line },
+      ...row.citation_commit !== null && { commit: row.citation_commit }
+    };
+  }
+  if (row.compaction_level !== null && row.compaction_level !== 0) {
+    lesson.compactionLevel = row.compaction_level;
+  }
+  if (row.compacted_at !== null) {
+    lesson.compactedAt = row.compacted_at;
+  }
+  if (row.last_retrieved !== null) {
+    lesson.lastRetrieved = row.last_retrieved;
+  }
   return lesson;
 }
 function collectCachedEmbeddings(database) {
@@ -277,8 +355,8 @@ function collectCachedEmbeddings(database) {
   return cache;
 }
 var INSERT_LESSON_SQL = `
-  INSERT INTO lessons (id, type, trigger, insight, evidence, severity, tags, source, context, supersedes, related, created, confirmed, deleted, retrieval_count, last_retrieved, embedding, content_hash)
-  VALUES (@id, @type, @trigger, @insight, @evidence, @severity, @tags, @source, @context, @supersedes, @related, @created, @confirmed, @deleted, @retrieval_count, @last_retrieved, @embedding, @content_hash)
+  INSERT INTO lessons (id, type, trigger, insight, evidence, severity, tags, source, context, supersedes, related, created, confirmed, deleted, retrieval_count, last_retrieved, embedding, content_hash, invalidated_at, invalidation_reason, citation_file, citation_line, citation_commit, compaction_level, compacted_at)
+  VALUES (@id, @type, @trigger, @insight, @evidence, @severity, @tags, @source, @context, @supersedes, @related, @created, @confirmed, @deleted, @retrieval_count, @last_retrieved, @embedding, @content_hash, @invalidated_at, @invalidation_reason, @citation_file, @citation_line, @citation_commit, @compaction_level, @compacted_at)
 `;
 function getJsonlMtime(repoRoot) {
   const jsonlPath = join(repoRoot, LESSONS_PATH);
@@ -330,10 +408,17 @@ async function rebuildIndex(repoRoot) {
         confirmed: lesson.confirmed ? 1 : 0,
         deleted: lesson.deleted ? 1 : 0,
         retrieval_count: lesson.retrievalCount ?? 0,
-        last_retrieved: null,
-        // Reset on rebuild since we're rebuilding from source
+        last_retrieved: lesson.lastRetrieved ?? null,
         embedding: hasValidCache ? cached.embedding : null,
-        content_hash: hasValidCache ? cached.contentHash : null
+        content_hash: hasValidCache ? cached.contentHash : null,
+        // v0.2.2 fields
+        invalidated_at: lesson.invalidatedAt ?? null,
+        invalidation_reason: lesson.invalidationReason ?? null,
+        citation_file: lesson.citation?.file ?? null,
+        citation_line: lesson.citation?.line ?? null,
+        citation_commit: lesson.citation?.commit ?? null,
+        compaction_level: lesson.compactionLevel ?? 0,
+        compacted_at: lesson.compactedAt ?? null
       });
     }
   });
@@ -368,6 +453,7 @@ async function searchKeyword(repoRoot, query, limit) {
       FROM lessons l
       JOIN lessons_fts fts ON l.rowid = fts.rowid
       WHERE lessons_fts MATCH ?
+        AND l.invalidated_at IS NULL
       LIMIT ?
     `
   ).all(query, limit);
@@ -635,178 +721,18 @@ async function parseInputFile(filePath) {
   return data;
 }
 
-// src/cli-utils.ts
-function formatBytes(bytes) {
-  if (bytes === 0) return "0 B";
-  if (bytes < 1024) return `${bytes} B`;
-  const kb = bytes / 1024;
-  if (kb < 1024) return `${kb.toFixed(1)} KB`;
-  const mb = kb / 1024;
-  return `${mb.toFixed(1)} MB`;
-}
-function parseLimit(value, name) {
-  const parsed = parseInt(value, 10);
-  if (Number.isNaN(parsed) || parsed <= 0) {
-    throw new Error(`Invalid ${name}: must be a positive integer`);
-  }
-  return parsed;
-}
-function getRepoRoot() {
-  return process.env["LEARNING_AGENT_ROOT"] ?? process.cwd();
-}
-var MODEL_URI = "hf:ggml-org/embeddinggemma-300M-qat-q4_0-GGUF/embeddinggemma-300M-qat-Q4_0.gguf";
-var MODEL_FILENAME = "hf_ggml-org_embeddinggemma-300M-qat-Q4_0.gguf";
-var DEFAULT_MODEL_DIR = join(homedir(), ".node-llama-cpp", "models");
-function isModelAvailable() {
-  return existsSync(join(DEFAULT_MODEL_DIR, MODEL_FILENAME));
-}
-async function resolveModel(options = {}) {
-  const { cli = true } = options;
-  return resolveModelFile(MODEL_URI, { cli });
-}
-
-// src/embeddings/nomic.ts
-var embeddingContext = null;
-async function getEmbedding() {
-  if (embeddingContext) return embeddingContext;
-  const modelPath = await resolveModel({ cli: true });
-  const llama = await getLlama();
-  const model = await llama.loadModel({ modelPath });
-  embeddingContext = await model.createEmbeddingContext();
-  return embeddingContext;
-}
-async function embedText(text) {
-  const ctx = await getEmbedding();
-  const result = await ctx.getEmbeddingFor(text);
-  return Array.from(result.vector);
-}
-
-// src/search/vector.ts
-function cosineSimilarity(a, b) {
-  if (a.length !== b.length) {
-    throw new Error("Vectors must have same length");
-  }
-  let dotProduct = 0;
-  let normA = 0;
-  let normB = 0;
-  for (let i = 0; i < a.length; i++) {
-    dotProduct += a[i] * b[i];
-    normA += a[i] * a[i];
-    normB += b[i] * b[i];
-  }
-  const magnitude = Math.sqrt(normA) * Math.sqrt(normB);
-  if (magnitude === 0) return 0;
-  return dotProduct / magnitude;
-}
-var DEFAULT_LIMIT = 10;
-async function searchVector(repoRoot, query, options) {
-  const limit = options?.limit ?? DEFAULT_LIMIT;
-  const { lessons } = await readLessons(repoRoot);
-  if (lessons.length === 0) return [];
-  const queryVector = await embedText(query);
-  const scored = [];
-  for (const lesson of lessons) {
-    const lessonText = `${lesson.trigger} ${lesson.insight}`;
-    const hash = contentHash(lesson.trigger, lesson.insight);
-    let lessonVector = getCachedEmbedding(repoRoot, lesson.id, hash);
-    if (!lessonVector) {
-      lessonVector = await embedText(lessonText);
-      setCachedEmbedding(repoRoot, lesson.id, lessonVector, hash);
-    }
-    const score = cosineSimilarity(queryVector, lessonVector);
-    scored.push({ lesson, score });
-  }
-  scored.sort((a, b) => b.score - a.score);
-  return scored.slice(0, limit);
-}
-
-// src/search/ranking.ts
-var RECENCY_THRESHOLD_DAYS = 30;
-var HIGH_SEVERITY_BOOST = 1.5;
-var MEDIUM_SEVERITY_BOOST = 1;
-var LOW_SEVERITY_BOOST = 0.8;
-var RECENCY_BOOST = 1.2;
-var CONFIRMATION_BOOST = 1.3;
-function severityBoost(lesson) {
-  switch (lesson.severity) {
-    case "high":
-      return HIGH_SEVERITY_BOOST;
-    case "medium":
-      return MEDIUM_SEVERITY_BOOST;
-    case "low":
-      return LOW_SEVERITY_BOOST;
-    default:
-      return MEDIUM_SEVERITY_BOOST;
-  }
-}
-function recencyBoost(lesson) {
-  const created = new Date(lesson.created);
-  const now = /* @__PURE__ */ new Date();
-  const ageMs = now.getTime() - created.getTime();
-  const ageDays = Math.floor(ageMs / (1e3 * 60 * 60 * 24));
-  return ageDays <= RECENCY_THRESHOLD_DAYS ? RECENCY_BOOST : 1;
-}
-function confirmationBoost(lesson) {
-  return lesson.confirmed ? CONFIRMATION_BOOST : 1;
-}
-function calculateScore(lesson, vectorSimilarity) {
-  return vectorSimilarity * severityBoost(lesson) * recencyBoost(lesson) * confirmationBoost(lesson);
-}
-function rankLessons(lessons) {
-  return lessons.map((scored) => ({
-    ...scored,
-    finalScore: calculateScore(scored.lesson, scored.score)
-  })).sort((a, b) => (b.finalScore ?? 0) - (a.finalScore ?? 0));
-}
-
-// src/retrieval/session.ts
-var DEFAULT_LIMIT2 = 5;
-function isFullLesson(lesson) {
-  return lesson.type === "full" && lesson.severity !== void 0;
-}
-async function loadSessionLessons(repoRoot, limit = DEFAULT_LIMIT2) {
-  const { lessons: allLessons } = await readLessons(repoRoot);
-  const highSeverityLessons = allLessons.filter(
-    (lesson) => isFullLesson(lesson) && lesson.severity === "high" && lesson.confirmed
-  );
-  highSeverityLessons.sort((a, b) => {
-    const dateA = new Date(a.created).getTime();
-    const dateB = new Date(b.created).getTime();
-    return dateB - dateA;
-  });
-  return highSeverityLessons.slice(0, limit);
-}
-
-// src/retrieval/plan.ts
-var DEFAULT_LIMIT3 = 5;
-async function retrieveForPlan(repoRoot, planText, limit = DEFAULT_LIMIT3) {
-  const scored = await searchVector(repoRoot, planText, { limit: limit * 2 });
-  const ranked = rankLessons(scored);
-  const topLessons = ranked.slice(0, limit);
-  const message = formatLessonsCheck(topLessons);
-  return { lessons: topLessons, message };
-}
-function formatLessonsCheck(lessons) {
-  const header = "\u{1F4DA} Lessons Check\n" + "\u2500".repeat(40);
-  if (lessons.length === 0) {
-    return `${header}
-No relevant lessons found for this plan.`;
-  }
-  const lessonLines = lessons.map((l, i) => {
-    const bullet = `${i + 1}.`;
-    const insight = l.lesson.insight;
-    return `${bullet} ${insight}`;
-  });
-  return `${header}
-${lessonLines.join("\n")}`;
+// src/utils.ts
+var MS_PER_DAY = 24 * 60 * 60 * 1e3;
+function getLessonAgeDays(lesson) {
+  const created = new Date(lesson.created).getTime();
+  const now = Date.now();
+  return Math.floor((now - created) / MS_PER_DAY);
 }
 
-// src/index.ts
-var VERSION = "0.1.0";
+// src/storage/compact.ts
 var ARCHIVE_DIR = ".claude/lessons/archive";
 var TOMBSTONE_THRESHOLD = 100;
 var ARCHIVE_AGE_DAYS = 90;
-var MS_PER_DAY = 1e3 * 60 * 60 * 24;
 var MONTH_INDEX_OFFSET = 1;
 var MONTH_PAD_LENGTH = 2;
 function getArchivePath(repoRoot, date) {
@@ -860,19 +786,16 @@ async function rewriteWithoutTombstones(repoRoot) {
   await rename(tempPath, filePath);
   return tombstoneCount;
 }
-function shouldArchive(lesson, now) {
-  const created = new Date(lesson.created);
-  const ageMs = now.getTime() - created.getTime();
-  const ageDays = ageMs / MS_PER_DAY;
+function shouldArchive(lesson) {
+  const ageDays = getLessonAgeDays(lesson);
   return ageDays > ARCHIVE_AGE_DAYS && (lesson.retrievalCount === void 0 || lesson.retrievalCount === 0);
 }
 async function archiveOldLessons(repoRoot) {
   const { lessons } = await readLessons(repoRoot);
-  const now = /* @__PURE__ */ new Date();
   const toArchive = [];
   const toKeep = [];
   for (const lesson of lessons) {
-    if (shouldArchive(lesson, now)) {
+    if (shouldArchive(lesson)) {
       toArchive.push(lesson);
     } else {
       toKeep.push(lesson);
@@ -916,30 +839,6 @@ async function compact(repoRoot) {
     lessonsRemaining: lessons.length
   };
 }
-
-// src/cli.ts
-var PRE_COMMIT_MESSAGE = `Before committing, have you captured any valuable lessons from this session?
-Consider: corrections, mistakes, or insights worth remembering.
-
-To capture a lesson:
-  npx learning-agent capture --trigger "what happened" --insight "what to do" --yes`;
-var PRE_COMMIT_HOOK_TEMPLATE = `#!/bin/sh
-# Learning Agent pre-commit hook
-# Reminds Claude to consider capturing lessons before commits
-
-npx learning-agent hooks run pre-commit
-`;
-var CLAUDE_HOOK_MARKER = "learning-agent load-session";
-var CLAUDE_HOOK_CONFIG = {
-  matcher: "startup|resume|compact",
-  hooks: [
-    {
-      type: "command",
-      command: "npx learning-agent load-session 2>/dev/null || true"
-    }
-  ]
-};
-var HOOK_MARKER = "# Learning Agent pre-commit hook";
 var out = {
   success: (msg) => console.log(chalk.green("[ok]"), msg),
   error: (msg) => console.error(chalk.red("[error]"), msg),
@@ -956,10 +855,14 @@ function getGlobalOpts(cmd) {
 var DEFAULT_SEARCH_LIMIT = "10";
 var DEFAULT_LIST_LIMIT = "20";
 var DEFAULT_CHECK_PLAN_LIMIT = "5";
+var LESSON_COUNT_WARNING_THRESHOLD = 20;
+var AGE_FLAG_THRESHOLD_DAYS = 90;
 var ISO_DATE_PREFIX_LENGTH = 10;
 var AVG_DECIMAL_PLACES = 1;
 var RELEVANCE_DECIMAL_PLACES = 2;
 var JSON_INDENT_SPACES = 2;
+
+// src/commands/capture.ts
 function createLessonFromFlags(trigger, insight, confirmed) {
   return {
     id: generateId(insight),
@@ -1008,62 +911,955 @@ function createLessonFromInputFile(result, confirmed) {
     related: []
   };
 }
-async function readPlanFromStdin() {
-  const { stdin } = await import('process');
-  if (!stdin.isTTY) {
-    const chunks = [];
-    for await (const chunk of stdin) {
-      chunks.push(chunk);
+function registerCaptureCommands(program2) {
+  program2.command("learn <insight>").description("Capture a new lesson").option("-t, --trigger <text>", "What triggered this lesson").option("--tags <tags>", "Comma-separated tags", "").option("-s, --severity <level>", "Lesson severity: high, medium, low").option("-y, --yes", "Skip confirmation").option("--citation <file:line>", "Source file (optionally with :line number)").option("--citation-commit <hash>", "Git commit hash for citation").action(async function(insight, options) {
+    const repoRoot = getRepoRoot();
+    const { quiet } = getGlobalOpts(this);
+    let severity;
+    if (options.severity !== void 0) {
+      const result = SeveritySchema.safeParse(options.severity);
+      if (!result.success) {
+        out.error(`Invalid severity value: "${options.severity}". Valid values are: high, medium, low`);
+        process.exit(1);
+      }
+      severity = result.data;
     }
-    return Buffer.concat(chunks).toString("utf-8").trim();
-  }
-  return void 0;
-}
-function outputCheckPlanJson(lessons) {
-  const jsonOutput = {
-    lessons: lessons.map((l) => ({
-      id: l.lesson.id,
-      insight: l.lesson.insight,
-      relevance: l.score,
-      source: l.lesson.source
-    })),
-    count: lessons.length
-  };
-  console.log(JSON.stringify(jsonOutput));
-}
-function outputCheckPlanHuman(lessons, quiet) {
-  console.log("## Lessons Check\n");
-  console.log("Relevant to your plan:\n");
-  lessons.forEach((item, i) => {
-    const num = i + 1;
-    console.log(`${num}. ${chalk.bold(`[${item.lesson.id}]`)} ${item.lesson.insight}`);
-    console.log(`   - Relevance: ${item.score.toFixed(RELEVANCE_DECIMAL_PLACES)}`);
-    console.log(`   - Source: ${item.lesson.source}`);
-    console.log();
+    const lessonType = severity !== void 0 ? "full" : "quick";
+    let citation;
+    if (options.citation) {
+      const parts = options.citation.split(":");
+      const file = parts[0] ?? "";
+      const lineStr = parts[1];
+      const line = lineStr ? parseInt(lineStr, 10) : void 0;
+      citation = {
+        file,
+        ...line && !isNaN(line) && { line },
+        ...options.citationCommit && { commit: options.citationCommit }
+      };
+    }
+    const lesson = {
+      id: generateId(insight),
+      type: lessonType,
+      trigger: options.trigger ?? "Manual capture",
+      insight,
+      tags: options.tags ? options.tags.split(",").map((t) => t.trim()) : [],
+      source: "manual",
+      context: {
+        tool: "cli",
+        intent: "manual learning"
+      },
+      created: (/* @__PURE__ */ new Date()).toISOString(),
+      confirmed: true,
+      // learn command is explicit confirmation
+      supersedes: [],
+      related: [],
+      ...severity !== void 0 && { severity },
+      ...citation && { citation }
+    };
+    await appendLesson(repoRoot, lesson);
+    const chalk3 = await import('chalk');
+    out.success(`Learned: ${insight}`);
+    if (!quiet) {
+      console.log(`ID: ${chalk3.default.dim(lesson.id)}`);
+      if (citation) {
+        console.log(`Citation: ${chalk3.default.dim(citation.file)}${citation.line ? `:${citation.line}` : ""}`);
+      }
+    }
+  });
+  program2.command("detect").description("Detect learning triggers from input").requiredOption("--input <file>", "Path to JSON input file").option("--save", "Save proposed lesson (requires --yes)").option("-y, --yes", "Confirm save (required with --save)").option("--json", "Output result as JSON").action(
+    async (options) => {
+      const repoRoot = getRepoRoot();
+      if (options.save && !options.yes) {
+        if (options.json) {
+          console.log(JSON.stringify({ error: "--save requires --yes flag for confirmation" }));
+        } else {
+          out.error("--save requires --yes flag for confirmation");
+          console.log("Use: detect --input <file> --save --yes");
+        }
+        process.exit(1);
+      }
+      const input = await parseInputFile(options.input);
+      const result = await detectAndPropose(repoRoot, input);
+      if (!result) {
+        if (options.json) {
+          console.log(JSON.stringify({ detected: false }));
+        } else {
+          console.log("No learning trigger detected.");
+        }
+        return;
+      }
+      if (options.json) {
+        console.log(JSON.stringify({ detected: true, ...result }));
+        return;
+      }
+      console.log("Learning trigger detected!");
+      console.log(`  Trigger: ${result.trigger}`);
+      console.log(`  Source: ${result.source}`);
+      console.log(`  Proposed: ${result.proposedInsight}`);
+      if (options.save && options.yes) {
+        const lesson = {
+          id: generateId(result.proposedInsight),
+          type: "quick",
+          trigger: result.trigger,
+          insight: result.proposedInsight,
+          tags: [],
+          source: result.source,
+          context: { tool: "detect", intent: "auto-capture" },
+          created: (/* @__PURE__ */ new Date()).toISOString(),
+          confirmed: true,
+          // --yes confirms the lesson
+          supersedes: [],
+          related: []
+        };
+        await appendLesson(repoRoot, lesson);
+        console.log(`
+Saved as lesson: ${lesson.id}`);
+      }
+    }
+  );
+  program2.command("capture").description("Capture a lesson from trigger/insight or input file").option("-t, --trigger <text>", "What triggered this lesson").option("-i, --insight <text>", "The insight or lesson learned").option("--input <file>", "Path to JSON input file (alternative to trigger/insight)").option("--json", "Output result as JSON").option("-y, --yes", "Skip confirmation and save immediately").action(async function(options) {
+    const repoRoot = getRepoRoot();
+    const { verbose } = getGlobalOpts(this);
+    let lesson;
+    if (options.input) {
+      const input = await parseInputFile(options.input);
+      const result = await detectAndPropose(repoRoot, input);
+      if (!result) {
+        options.json ? console.log(JSON.stringify({ detected: false, saved: false })) : console.log("No learning trigger detected.");
+        return;
+      }
+      lesson = createLessonFromInputFile(result, options.yes ?? false);
+    } else if (options.trigger && options.insight) {
+      lesson = createLessonFromFlags(options.trigger, options.insight, options.yes ?? false);
+    } else {
+      const msg = "Provide either --trigger and --insight, or --input file.";
+      options.json ? console.log(JSON.stringify({ error: msg, saved: false })) : out.error(msg);
+      process.exit(1);
+    }
+    if (!options.yes && !process.stdin.isTTY) {
+      if (options.json) {
+        console.log(JSON.stringify({ error: "--yes required in non-interactive mode", saved: false }));
+      } else {
+        out.error("--yes required in non-interactive mode");
+        console.log('Use: capture --trigger "..." --insight "..." --yes');
+      }
+      process.exit(1);
+    }
+    if (options.json) {
+      if (options.yes) await appendLesson(repoRoot, lesson);
+      outputCaptureJson(lesson, options.yes ?? false);
+    } else if (options.yes) {
+      await appendLesson(repoRoot, lesson);
+      out.success(`Lesson saved: ${lesson.id}`);
+      if (verbose) console.log(`  Type: ${lesson.type} | Trigger: ${lesson.trigger}`);
+    } else {
+      outputCapturePreview(lesson);
+    }
+  });
+}
+function registerManagementCommands(program2) {
+  program2.command("wrong <id>").description("Mark a lesson as invalid/wrong").option("-r, --reason <text>", "Reason for invalidation").action(async function(id, options) {
+    const repoRoot = getRepoRoot();
+    const { lessons } = await readLessons(repoRoot);
+    const lesson = lessons.find((l) => l.id === id);
+    if (!lesson) {
+      out.error(`Lesson not found: ${id}`);
+      process.exit(1);
+    }
+    if (lesson.invalidatedAt) {
+      out.warn(`Lesson ${id} is already marked as invalid.`);
+      return;
+    }
+    const updatedLesson = {
+      ...lesson,
+      invalidatedAt: (/* @__PURE__ */ new Date()).toISOString(),
+      ...options.reason !== void 0 && { invalidationReason: options.reason }
+    };
+    await appendLesson(repoRoot, updatedLesson);
+    out.success(`Lesson ${id} marked as invalid.`);
+    if (options.reason) {
+      console.log(`  Reason: ${options.reason}`);
+    }
+  });
+  program2.command("validate <id>").description("Re-enable a previously invalidated lesson").action(async function(id) {
+    const repoRoot = getRepoRoot();
+    const { lessons } = await readLessons(repoRoot);
+    const lesson = lessons.find((l) => l.id === id);
+    if (!lesson) {
+      out.error(`Lesson not found: ${id}`);
+      process.exit(1);
+    }
+    if (!lesson.invalidatedAt) {
+      out.info(`Lesson ${id} is not invalidated.`);
+      return;
+    }
+    const updatedLesson = {
+      id: lesson.id,
+      type: lesson.type,
+      trigger: lesson.trigger,
+      insight: lesson.insight,
+      tags: lesson.tags,
+      source: lesson.source,
+      context: lesson.context,
+      created: lesson.created,
+      confirmed: lesson.confirmed,
+      supersedes: lesson.supersedes,
+      related: lesson.related,
+      // Include optional fields if present (excluding invalidation)
+      ...lesson.evidence !== void 0 && { evidence: lesson.evidence },
+      ...lesson.severity !== void 0 && { severity: lesson.severity },
+      ...lesson.pattern !== void 0 && { pattern: lesson.pattern },
+      ...lesson.deleted !== void 0 && { deleted: lesson.deleted },
+      ...lesson.retrievalCount !== void 0 && { retrievalCount: lesson.retrievalCount },
+      ...lesson.citation !== void 0 && { citation: lesson.citation },
+      ...lesson.compactionLevel !== void 0 && { compactionLevel: lesson.compactionLevel },
+      ...lesson.compactedAt !== void 0 && { compactedAt: lesson.compactedAt },
+      ...lesson.lastRetrieved !== void 0 && { lastRetrieved: lesson.lastRetrieved }
+    };
+    await appendLesson(repoRoot, updatedLesson);
+    out.success(`Lesson ${id} re-enabled (validated).`);
+  });
+  program2.command("compact").description("Compact lessons: archive old lessons and remove tombstones").option("-f, --force", "Run compaction even if below threshold").option("--dry-run", "Show what would be done without making changes").action(async (options) => {
+    const repoRoot = getRepoRoot();
+    const tombstones = await countTombstones(repoRoot);
+    const needs = await needsCompaction(repoRoot);
+    if (options.dryRun) {
+      console.log("Dry run - no changes will be made.\n");
+      console.log(`Tombstones found: ${tombstones}`);
+      console.log(`Compaction needed: ${needs ? "yes" : "no"}`);
+      return;
+    }
+    if (!needs && !options.force) {
+      console.log(`Compaction not needed (${tombstones} tombstones, threshold is ${TOMBSTONE_THRESHOLD}).`);
+      console.log("Use --force to compact anyway.");
+      return;
+    }
+    console.log("Running compaction...");
+    const result = await compact(repoRoot);
+    console.log("\nCompaction complete:");
+    console.log(`  Archived: ${result.archived} lesson(s)`);
+    console.log(`  Tombstones removed: ${result.tombstonesRemoved}`);
+    console.log(`  Lessons remaining: ${result.lessonsRemaining}`);
+    await rebuildIndex(repoRoot);
+    console.log("  Index rebuilt.");
+  });
+  program2.command("rebuild").description("Rebuild SQLite index from JSONL").option("-f, --force", "Force rebuild even if unchanged").action(async (options) => {
+    const repoRoot = getRepoRoot();
+    if (options.force) {
+      console.log("Forcing index rebuild...");
+      await rebuildIndex(repoRoot);
+      console.log("Index rebuilt.");
+    } else {
+      const rebuilt = await syncIfNeeded(repoRoot);
+      if (rebuilt) {
+        console.log("Index rebuilt (JSONL changed).");
+      } else {
+        console.log("Index is up to date.");
+      }
+    }
+  });
+  program2.command("stats").description("Show database health and statistics").action(async () => {
+    const repoRoot = getRepoRoot();
+    await syncIfNeeded(repoRoot);
+    const { lessons } = await readLessons(repoRoot);
+    const deletedCount = await countTombstones(repoRoot);
+    const totalLessons = lessons.length;
+    const retrievalStats = getRetrievalStats(repoRoot);
+    const totalRetrievals = retrievalStats.reduce((sum, s) => sum + s.count, 0);
+    const avgRetrievals = totalLessons > 0 ? (totalRetrievals / totalLessons).toFixed(AVG_DECIMAL_PLACES) : "0.0";
+    const jsonlPath = join(repoRoot, LESSONS_PATH);
+    const dbPath = join(repoRoot, DB_PATH);
+    let dataSize = 0;
+    let indexSize = 0;
+    try {
+      dataSize = statSync(jsonlPath).size;
+    } catch {
+    }
+    try {
+      indexSize = statSync(dbPath).size;
+    } catch {
+    }
+    const totalSize = dataSize + indexSize;
+    let recentCount = 0;
+    let mediumCount = 0;
+    let oldCount = 0;
+    for (const lesson of lessons) {
+      const ageDays = getLessonAgeDays(lesson);
+      if (ageDays < 30) {
+        recentCount++;
+      } else if (ageDays <= AGE_FLAG_THRESHOLD_DAYS) {
+        mediumCount++;
+      } else {
+        oldCount++;
+      }
+    }
+    const deletedInfo = deletedCount > 0 ? ` (${deletedCount} deleted)` : "";
+    console.log(`Lessons: ${totalLessons} total${deletedInfo}`);
+    if (totalLessons > LESSON_COUNT_WARNING_THRESHOLD) {
+      out.warn(`High lesson count may degrade retrieval quality. Consider running \`lna compact\`.`);
+    }
+    if (totalLessons > 0) {
+      console.log(`Age: ${recentCount} <30d, ${mediumCount} 30-90d, ${oldCount} >90d`);
+    }
+    console.log(`Retrievals: ${totalRetrievals} total, ${avgRetrievals} avg per lesson`);
+    console.log(`Storage: ${formatBytes(totalSize)} (index: ${formatBytes(indexSize)}, data: ${formatBytes(dataSize)})`);
+  });
+  program2.command("export").description("Export lessons as JSON to stdout").option("--since <date>", "Only include lessons created after this date (ISO8601)").option("--tags <tags>", "Filter by tags (comma-separated, OR logic)").action(async (options) => {
+    const repoRoot = getRepoRoot();
+    const { lessons } = await readLessons(repoRoot);
+    let filtered = lessons;
+    if (options.since) {
+      const sinceDate = new Date(options.since);
+      if (Number.isNaN(sinceDate.getTime())) {
+        console.error(`Invalid date format: ${options.since}. Use ISO8601 format (e.g., 2024-01-15).`);
+        process.exit(1);
+      }
+      filtered = filtered.filter((lesson) => new Date(lesson.created) >= sinceDate);
+    }
+    if (options.tags) {
+      const filterTags = options.tags.split(",").map((t) => t.trim());
+      filtered = filtered.filter((lesson) => lesson.tags.some((tag) => filterTags.includes(tag)));
+    }
+    console.log(JSON.stringify(filtered, null, JSON_INDENT_SPACES));
+  });
+  program2.command("import <file>").description("Import lessons from a JSONL file").action(async (file) => {
+    const repoRoot = getRepoRoot();
+    let content;
+    try {
+      content = await readFile(file, "utf-8");
+    } catch (err) {
+      const code = err.code;
+      if (code === "ENOENT") {
+        console.error(`Error: File not found: ${file}`);
+      } else {
+        console.error(`Error reading file: ${err.message}`);
+      }
+      process.exit(1);
+    }
+    const { lessons: existingLessons } = await readLessons(repoRoot);
+    const existingIds = new Set(existingLessons.map((l) => l.id));
+    const lines = content.split("\n");
+    let imported = 0;
+    let skipped = 0;
+    let invalid = 0;
+    for (const line of lines) {
+      const trimmed = line.trim();
+      if (!trimmed) continue;
+      let parsed;
+      try {
+        parsed = JSON.parse(trimmed);
+      } catch {
+        invalid++;
+        continue;
+      }
+      const result = LessonSchema.safeParse(parsed);
+      if (!result.success) {
+        invalid++;
+        continue;
+      }
+      const lesson = result.data;
+      if (existingIds.has(lesson.id)) {
+        skipped++;
+        continue;
+      }
+      await appendLesson(repoRoot, lesson);
+      existingIds.add(lesson.id);
+      imported++;
+    }
+    const lessonWord = imported === 1 ? "lesson" : "lessons";
+    const parts = [];
+    if (skipped > 0) parts.push(`${skipped} skipped`);
+    if (invalid > 0) parts.push(`${invalid} invalid`);
+    if (parts.length > 0) {
+      console.log(`Imported ${imported} ${lessonWord} (${parts.join(", ")})`);
+    } else {
+      console.log(`Imported ${imported} ${lessonWord}`);
+    }
+  });
+  const SHOW_JSON_INDENT = 2;
+  program2.command("show <id>").description("Show details of a specific lesson").option("--json", "Output as JSON").action(async (id, options) => {
+    const repoRoot = getRepoRoot();
+    const { lessons } = await readLessons(repoRoot);
+    const lesson = lessons.find((l) => l.id === id);
+    if (!lesson) {
+      const filePath = join(repoRoot, LESSONS_PATH);
+      let wasDeleted = false;
+      try {
+        const content = await readFile(filePath, "utf-8");
+        const lines = content.split("\n");
+        for (const line of lines) {
+          const trimmed = line.trim();
+          if (!trimmed) continue;
+          try {
+            const record = JSON.parse(trimmed);
+            if (record.id === id && record.deleted === true) {
+              wasDeleted = true;
+              break;
+            }
+          } catch {
+          }
+        }
+      } catch {
+      }
+      if (options.json) {
+        console.log(JSON.stringify({ error: wasDeleted ? `Lesson ${id} not found (deleted)` : `Lesson ${id} not found` }));
+      } else {
+        out.error(wasDeleted ? `Lesson ${id} not found (deleted)` : `Lesson ${id} not found`);
+      }
+      process.exit(1);
+    }
+    if (options.json) {
+      console.log(JSON.stringify(lesson, null, SHOW_JSON_INDENT));
+    } else {
+      console.log(formatLessonHuman(lesson));
+    }
+  });
+  program2.command("update <id>").description("Update a lesson").option("--insight <text>", "Update insight").option("--trigger <text>", "Update trigger").option("--evidence <text>", "Update evidence").option("--severity <level>", "Update severity (low/medium/high)").option("--tags <tags>", "Update tags (comma-separated)").option("--confirmed <bool>", "Update confirmed status (true/false)").option("--json", "Output as JSON").action(async (id, options) => {
+    const repoRoot = getRepoRoot();
+    const hasUpdates = options.insight !== void 0 || options.trigger !== void 0 || options.evidence !== void 0 || options.severity !== void 0 || options.tags !== void 0 || options.confirmed !== void 0;
+    if (!hasUpdates) {
+      if (options.json) {
+        console.log(JSON.stringify({ error: "No fields to update (specify at least one: --insight, --tags, --severity, ...)" }));
+      } else {
+        out.error("No fields to update (specify at least one: --insight, --tags, --severity, ...)");
+      }
+      process.exit(1);
+    }
+    const { lessons } = await readLessons(repoRoot);
+    const lesson = lessons.find((l) => l.id === id);
+    if (!lesson) {
+      const filePath = join(repoRoot, LESSONS_PATH);
+      let wasDeleted = false;
+      try {
+        const content = await readFile(filePath, "utf-8");
+        const lines = content.split("\n");
+        for (const line of lines) {
+          const trimmed = line.trim();
+          if (!trimmed) continue;
+          try {
+            const record = JSON.parse(trimmed);
+            if (record.id === id && record.deleted === true) {
+              wasDeleted = true;
+              break;
+            }
+          } catch {
+          }
+        }
+      } catch {
+      }
+      if (options.json) {
+        console.log(JSON.stringify({ error: wasDeleted ? `Lesson ${id} is deleted` : `Lesson ${id} not found` }));
+      } else {
+        out.error(wasDeleted ? `Lesson ${id} is deleted` : `Lesson ${id} not found`);
+      }
+      process.exit(1);
+    }
+    if (options.severity !== void 0) {
+      const result = SeveritySchema.safeParse(options.severity);
+      if (!result.success) {
+        if (options.json) {
+          console.log(JSON.stringify({ error: `Invalid severity '${options.severity}' (must be: high, medium, low)` }));
+        } else {
+          out.error(`Invalid severity '${options.severity}' (must be: high, medium, low)`);
+        }
+        process.exit(1);
+      }
+    }
+    const updatedLesson = {
+      ...lesson,
+      ...options.insight !== void 0 && { insight: options.insight },
+      ...options.trigger !== void 0 && { trigger: options.trigger },
+      ...options.evidence !== void 0 && { evidence: options.evidence },
+      ...options.severity !== void 0 && { severity: options.severity },
+      ...options.tags !== void 0 && {
+        tags: [...new Set(
+          options.tags.split(",").map((t) => t.trim()).filter((t) => t.length > 0)
+        )]
+      },
+      ...options.confirmed !== void 0 && { confirmed: options.confirmed === "true" }
+    };
+    const validationResult = LessonSchema.safeParse(updatedLesson);
+    if (!validationResult.success) {
+      if (options.json) {
+        console.log(JSON.stringify({ error: `Schema validation failed: ${validationResult.error.message}` }));
+      } else {
+        out.error(`Schema validation failed: ${validationResult.error.message}`);
+      }
+      process.exit(1);
+    }
+    await appendLesson(repoRoot, updatedLesson);
+    await syncIfNeeded(repoRoot);
+    if (options.json) {
+      console.log(JSON.stringify(updatedLesson, null, SHOW_JSON_INDENT));
+    } else {
+      out.success(`Updated lesson ${id}`);
+    }
+  });
+  program2.command("delete <ids...>").description("Soft delete lessons (creates tombstone)").option("--json", "Output as JSON").action(async (ids, options) => {
+    const repoRoot = getRepoRoot();
+    const { lessons } = await readLessons(repoRoot);
+    const lessonMap = new Map(lessons.map((l) => [l.id, l]));
+    const deleted = [];
+    const warnings = [];
+    for (const id of ids) {
+      const lesson = lessonMap.get(id);
+      if (!lesson) {
+        const wasDeleted = await wasLessonDeleted(repoRoot, id);
+        warnings.push({ id, message: wasDeleted ? "already deleted" : "not found" });
+        continue;
+      }
+      const tombstone = {
+        ...lesson,
+        deleted: true,
+        deletedAt: (/* @__PURE__ */ new Date()).toISOString()
+      };
+      await appendLesson(repoRoot, tombstone);
+      deleted.push(id);
+    }
+    if (deleted.length > 0) {
+      await syncIfNeeded(repoRoot);
+    }
+    if (options.json) {
+      console.log(JSON.stringify({ deleted, warnings }));
+    } else {
+      if (deleted.length > 0) {
+        out.success(`Deleted ${deleted.length} lesson(s): ${deleted.join(", ")}`);
+      }
+      for (const warning of warnings) {
+        out.warn(`${warning.id}: ${warning.message}`);
+      }
+      if (deleted.length === 0 && warnings.length > 0) {
+        process.exit(1);
+      }
+    }
+  });
+}
+function formatLessonHuman(lesson) {
+  const lines = [];
+  lines.push(`ID: ${lesson.id}`);
+  lines.push(`Type: ${lesson.type}`);
+  lines.push(`Trigger: ${lesson.trigger}`);
+  lines.push(`Insight: ${lesson.insight}`);
+  if (lesson.evidence) {
+    lines.push(`Evidence: ${lesson.evidence}`);
+  }
+  if (lesson.severity) {
+    lines.push(`Severity: ${lesson.severity}`);
+  }
+  lines.push(`Tags: ${lesson.tags.length > 0 ? lesson.tags.join(", ") : "(none)"}`);
+  lines.push(`Source: ${lesson.source}`);
+  if (lesson.context) {
+    lines.push(`Context: ${lesson.context.tool} - ${lesson.context.intent}`);
+  }
+  lines.push(`Created: ${lesson.created}`);
+  lines.push(`Confirmed: ${lesson.confirmed ? "yes" : "no"}`);
+  if (lesson.supersedes && lesson.supersedes.length > 0) {
+    lines.push(`Supersedes: ${lesson.supersedes.join(", ")}`);
+  }
+  if (lesson.related && lesson.related.length > 0) {
+    lines.push(`Related: ${lesson.related.join(", ")}`);
+  }
+  if (lesson.pattern) {
+    lines.push("Pattern:");
+    lines.push(`  Bad:  ${lesson.pattern.bad}`);
+    lines.push(`  Good: ${lesson.pattern.good}`);
+  }
+  return lines.join("\n");
+}
+async function wasLessonDeleted(repoRoot, id) {
+  const filePath = join(repoRoot, LESSONS_PATH);
+  try {
+    const content = await readFile(filePath, "utf-8");
+    const lines = content.split("\n");
+    for (const line of lines) {
+      const trimmed = line.trim();
+      if (!trimmed) continue;
+      try {
+        const record = JSON.parse(trimmed);
+        if (record.id === id && record.deleted === true) {
+          return true;
+        }
+      } catch {
+      }
+    }
+  } catch {
+  }
+  return false;
+}
+var MODEL_URI = "hf:ggml-org/embeddinggemma-300M-qat-q4_0-GGUF/embeddinggemma-300M-qat-Q4_0.gguf";
+var MODEL_FILENAME = "hf_ggml-org_embeddinggemma-300M-qat-Q4_0.gguf";
+var DEFAULT_MODEL_DIR = join(homedir(), ".node-llama-cpp", "models");
+function isModelAvailable() {
+  return existsSync(join(DEFAULT_MODEL_DIR, MODEL_FILENAME));
+}
+async function resolveModel(options = {}) {
+  const { cli = true } = options;
+  return resolveModelFile(MODEL_URI, { cli });
+}
+
+// src/embeddings/nomic.ts
+var embeddingContext = null;
+async function getEmbedding() {
+  if (embeddingContext) return embeddingContext;
+  const modelPath = await resolveModel({ cli: true });
+  const llama = await getLlama();
+  const model = await llama.loadModel({ modelPath });
+  embeddingContext = await model.createEmbeddingContext();
+  return embeddingContext;
+}
+async function embedText(text) {
+  const ctx = await getEmbedding();
+  const result = await ctx.getEmbeddingFor(text);
+  return Array.from(result.vector);
+}
+
+// src/search/vector.ts
+function cosineSimilarity(a, b) {
+  if (a.length !== b.length) {
+    throw new Error("Vectors must have same length");
+  }
+  let dotProduct = 0;
+  let normA = 0;
+  let normB = 0;
+  for (let i = 0; i < a.length; i++) {
+    dotProduct += a[i] * b[i];
+    normA += a[i] * a[i];
+    normB += b[i] * b[i];
+  }
+  const magnitude = Math.sqrt(normA) * Math.sqrt(normB);
+  if (magnitude === 0) return 0;
+  return dotProduct / magnitude;
+}
+var DEFAULT_LIMIT = 10;
+async function searchVector(repoRoot, query, options) {
+  const limit = options?.limit ?? DEFAULT_LIMIT;
+  const { lessons } = await readLessons(repoRoot);
+  if (lessons.length === 0) return [];
+  const queryVector = await embedText(query);
+  const scored = [];
+  for (const lesson of lessons) {
+    if (lesson.invalidatedAt) continue;
+    const lessonText = `${lesson.trigger} ${lesson.insight}`;
+    const hash = contentHash(lesson.trigger, lesson.insight);
+    let lessonVector = getCachedEmbedding(repoRoot, lesson.id, hash);
+    if (!lessonVector) {
+      lessonVector = await embedText(lessonText);
+      setCachedEmbedding(repoRoot, lesson.id, lessonVector, hash);
+    }
+    const score = cosineSimilarity(queryVector, lessonVector);
+    scored.push({ lesson, score });
+  }
+  scored.sort((a, b) => b.score - a.score);
+  return scored.slice(0, limit);
+}
+
+// src/search/ranking.ts
+var RECENCY_THRESHOLD_DAYS = 30;
+var HIGH_SEVERITY_BOOST = 1.5;
+var MEDIUM_SEVERITY_BOOST = 1;
+var LOW_SEVERITY_BOOST = 0.8;
+var RECENCY_BOOST = 1.2;
+var CONFIRMATION_BOOST = 1.3;
+function severityBoost(lesson) {
+  switch (lesson.severity) {
+    case "high":
+      return HIGH_SEVERITY_BOOST;
+    case "medium":
+      return MEDIUM_SEVERITY_BOOST;
+    case "low":
+      return LOW_SEVERITY_BOOST;
+    default:
+      return MEDIUM_SEVERITY_BOOST;
+  }
+}
+function recencyBoost(lesson) {
+  const ageDays = getLessonAgeDays(lesson);
+  return ageDays <= RECENCY_THRESHOLD_DAYS ? RECENCY_BOOST : 1;
+}
+function confirmationBoost(lesson) {
+  return lesson.confirmed ? CONFIRMATION_BOOST : 1;
+}
+function calculateScore(lesson, vectorSimilarity) {
+  return vectorSimilarity * severityBoost(lesson) * recencyBoost(lesson) * confirmationBoost(lesson);
+}
+function rankLessons(lessons) {
+  return lessons.map((scored) => ({
+    ...scored,
+    finalScore: calculateScore(scored.lesson, scored.score)
+  })).sort((a, b) => (b.finalScore ?? 0) - (a.finalScore ?? 0));
+}
+
+// src/retrieval/session.ts
+var DEFAULT_LIMIT2 = 5;
+function isFullLesson(lesson) {
+  return lesson.type === "full" && lesson.severity !== void 0;
+}
+async function loadSessionLessons(repoRoot, limit = DEFAULT_LIMIT2) {
+  const { lessons: allLessons } = await readLessons(repoRoot);
+  const highSeverityLessons = allLessons.filter(
+    (lesson) => isFullLesson(lesson) && lesson.severity === "high" && lesson.confirmed && !lesson.invalidatedAt
+  );
+  highSeverityLessons.sort((a, b) => {
+    const dateA = new Date(a.created).getTime();
+    const dateB = new Date(b.created).getTime();
+    return dateB - dateA;
+  });
+  return highSeverityLessons.slice(0, limit);
+}
+
+// src/retrieval/plan.ts
+var DEFAULT_LIMIT3 = 5;
+async function retrieveForPlan(repoRoot, planText, limit = DEFAULT_LIMIT3) {
+  const scored = await searchVector(repoRoot, planText, { limit: limit * 2 });
+  const ranked = rankLessons(scored);
+  const topLessons = ranked.slice(0, limit);
+  const message = formatLessonsCheck(topLessons);
+  return { lessons: topLessons, message };
+}
+function formatLessonsCheck(lessons) {
+  const header = "\u{1F4DA} Lessons Check\n" + "\u2500".repeat(40);
+  if (lessons.length === 0) {
+    return `${header}
+No relevant lessons found for this plan.`;
+  }
+  const lessonLines = lessons.map((l, i) => {
+    const bullet = `${i + 1}.`;
+    const insight = l.lesson.insight;
+    return `${bullet} ${insight}`;
+  });
+  return `${header}
+${lessonLines.join("\n")}`;
+}
+
+// src/index.ts
+var VERSION = "0.1.0";
+
+// src/commands/retrieval.ts
+async function readPlanFromStdin() {
+  const { stdin } = await import('process');
+  if (!stdin.isTTY) {
+    const chunks = [];
+    for await (const chunk of stdin) {
+      chunks.push(chunk);
+    }
+    return Buffer.concat(chunks).toString("utf-8").trim();
+  }
+  return void 0;
+}
+function outputCheckPlanJson(lessons) {
+  const jsonOutput = {
+    lessons: lessons.map((l) => ({
+      id: l.lesson.id,
+      insight: l.lesson.insight,
+      relevance: l.score,
+      source: l.lesson.source
+    })),
+    count: lessons.length
+  };
+  console.log(JSON.stringify(jsonOutput));
+}
+function outputCheckPlanHuman(lessons, quiet) {
+  console.log("## Lessons Check\n");
+  console.log("Relevant to your plan:\n");
+  lessons.forEach((item, i) => {
+    const num = i + 1;
+    console.log(`${num}. ${chalk.bold(`[${item.lesson.id}]`)} ${item.lesson.insight}`);
+    console.log(`   - Relevance: ${item.score.toFixed(RELEVANCE_DECIMAL_PLACES)}`);
+    console.log(`   - Source: ${item.lesson.source}`);
+    console.log();
   });
   if (!quiet) {
     console.log("---");
     console.log("Consider these lessons while implementing.");
   }
 }
+function formatSource(source) {
+  return source.replace(/_/g, " ");
+}
 function outputSessionLessonsHuman(lessons, quiet) {
-  console.log("## Session Lessons (High Severity)\n");
+  console.log("## Lessons from Past Sessions\n");
+  console.log("These lessons were captured from previous corrections and should inform your work:\n");
   lessons.forEach((lesson, i) => {
     const num = i + 1;
     const date = lesson.created.slice(0, ISO_DATE_PREFIX_LENGTH);
-    console.log(`${num}. ${chalk.bold(`[${lesson.id}]`)} ${lesson.insight}`);
-    console.log(`   - Source: ${lesson.source} (${date})`);
-    if (lesson.tags.length > 0) {
-      console.log(`   - Tags: ${lesson.tags.join(", ")}`);
-    }
+    const tagsDisplay = lesson.tags.length > 0 ? ` (${lesson.tags.join(", ")})` : "";
+    console.log(`${num}. **${lesson.insight}**${tagsDisplay}`);
+    console.log(`   Learned: ${date} via ${formatSource(lesson.source)}`);
     console.log();
   });
-  const lessonWord = lessons.length === 1 ? "lesson" : "lessons";
   if (!quiet) {
-    console.log("---");
-    console.log(`${lessons.length} high-severity ${lessonWord} loaded.`);
+    console.log("Consider these lessons when planning and implementing tasks.");
   }
 }
+function registerRetrievalCommands(program2) {
+  program2.command("search <query>").description("Search lessons by keyword").option("-n, --limit <number>", "Maximum results", DEFAULT_SEARCH_LIMIT).action(async function(query, options) {
+    const repoRoot = getRepoRoot();
+    const limit = parseLimit(options.limit, "limit");
+    const { verbose, quiet } = getGlobalOpts(this);
+    await syncIfNeeded(repoRoot);
+    const results = await searchKeyword(repoRoot, query, limit);
+    if (results.length === 0) {
+      console.log('No lessons match your search. Try a different query or use "list" to see all lessons.');
+      return;
+    }
+    if (!quiet) {
+      out.info(`Found ${results.length} lesson(s):
+`);
+    }
+    for (const lesson of results) {
+      console.log(`[${chalk.cyan(lesson.id)}] ${lesson.insight}`);
+      console.log(`  Trigger: ${lesson.trigger}`);
+      if (verbose && lesson.context) {
+        console.log(`  Context: ${lesson.context.tool} - ${lesson.context.intent}`);
+        console.log(`  Created: ${lesson.created}`);
+      }
+      if (lesson.tags.length > 0) {
+        console.log(`  Tags: ${lesson.tags.join(", ")}`);
+      }
+      console.log();
+    }
+  });
+  program2.command("list").description("List all lessons").option("-n, --limit <number>", "Maximum results", DEFAULT_LIST_LIMIT).option("--invalidated", "Show only invalidated lessons").action(async function(options) {
+    const repoRoot = getRepoRoot();
+    const limit = parseLimit(options.limit, "limit");
+    const { verbose, quiet } = getGlobalOpts(this);
+    const { lessons, skippedCount } = await readLessons(repoRoot);
+    const filteredLessons = options.invalidated ? lessons.filter((l) => l.invalidatedAt) : lessons;
+    if (filteredLessons.length === 0) {
+      if (options.invalidated) {
+        console.log("No invalidated lessons found.");
+      } else {
+        console.log('No lessons found. Get started with: learn "Your first lesson"');
+      }
+      if (skippedCount > 0) {
+        out.warn(`${skippedCount} corrupted lesson(s) skipped.`);
+      }
+      return;
+    }
+    const toShow = filteredLessons.slice(0, limit);
+    if (!quiet) {
+      const label = options.invalidated ? "invalidated lesson(s)" : "lesson(s)";
+      out.info(`Showing ${toShow.length} of ${filteredLessons.length} ${label}:
+`);
+    }
+    for (const lesson of toShow) {
+      const invalidMarker = lesson.invalidatedAt ? chalk.red("[INVALID] ") : "";
+      console.log(`[${chalk.cyan(lesson.id)}] ${invalidMarker}${lesson.insight}`);
+      if (verbose) {
+        console.log(`  Type: ${lesson.type} | Source: ${lesson.source}`);
+        console.log(`  Created: ${lesson.created}`);
+        if (lesson.context) {
+          console.log(`  Context: ${lesson.context.tool} - ${lesson.context.intent}`);
+        }
+        if (lesson.invalidatedAt) {
+          console.log(`  Invalidated: ${lesson.invalidatedAt}`);
+          if (lesson.invalidationReason) {
+            console.log(`  Reason: ${lesson.invalidationReason}`);
+          }
+        }
+      } else {
+        console.log(`  Type: ${lesson.type} | Source: ${lesson.source}`);
+      }
+      if (lesson.tags.length > 0) {
+        console.log(`  Tags: ${lesson.tags.join(", ")}`);
+      }
+      console.log();
+    }
+    if (skippedCount > 0) {
+      out.warn(`${skippedCount} corrupted lesson(s) skipped.`);
+    }
+  });
+  program2.command("load-session").description("Load high-severity lessons for session context").option("--json", "Output as JSON").action(async function(options) {
+    const repoRoot = getRepoRoot();
+    const { quiet } = getGlobalOpts(this);
+    const lessons = await loadSessionLessons(repoRoot);
+    const { lessons: allLessons } = await readLessons(repoRoot);
+    const totalCount = allLessons.length;
+    if (options.json) {
+      console.log(JSON.stringify({ lessons, count: lessons.length, totalCount }));
+      return;
+    }
+    if (lessons.length === 0) {
+      console.log("No high-severity lessons found.");
+      return;
+    }
+    outputSessionLessonsHuman(lessons, quiet);
+    if (totalCount > LESSON_COUNT_WARNING_THRESHOLD) {
+      console.log("");
+      out.info(`${totalCount} lessons in index. Consider \`lna compact\` to reduce context pollution.`);
+    }
+    const oldLessons = lessons.filter((l) => getLessonAgeDays(l) > AGE_FLAG_THRESHOLD_DAYS);
+    if (oldLessons.length > 0) {
+      console.log("");
+      out.warn(`${oldLessons.length} lesson(s) are over ${AGE_FLAG_THRESHOLD_DAYS} days old. Review for continued validity.`);
+    }
+  });
+  program2.command("check-plan").description("Check plan against relevant lessons").option("--plan <text>", "Plan text to check").option("--json", "Output as JSON").option("-n, --limit <number>", "Maximum results", DEFAULT_CHECK_PLAN_LIMIT).action(async function(options) {
+    const repoRoot = getRepoRoot();
+    const limit = parseLimit(options.limit, "limit");
+    const { quiet } = getGlobalOpts(this);
+    const planText = options.plan ?? await readPlanFromStdin();
+    if (!planText) {
+      out.error("No plan provided. Use --plan <text> or pipe text to stdin.");
+      process.exit(1);
+    }
+    if (!isModelAvailable()) {
+      if (options.json) {
+        console.log(JSON.stringify({
+          error: "Embedding model not available",
+          action: "Run: npx learning-agent download-model"
+        }));
+      } else {
+        out.error("Embedding model not available");
+        console.log("");
+        console.log("Run: npx learning-agent download-model");
+      }
+      process.exit(1);
+    }
+    try {
+      const result = await retrieveForPlan(repoRoot, planText, limit);
+      if (options.json) {
+        outputCheckPlanJson(result.lessons);
+        return;
+      }
+      if (result.lessons.length === 0) {
+        console.log("No relevant lessons found for this plan.");
+        return;
+      }
+      outputCheckPlanHuman(result.lessons, quiet);
+    } catch (err) {
+      const message = err instanceof Error ? err.message : "Unknown error";
+      if (options.json) {
+        console.log(JSON.stringify({ error: message }));
+      } else {
+        out.error(`Failed to check plan: ${message}`);
+      }
+      process.exit(1);
+    }
+  });
+}
+var PRE_COMMIT_MESSAGE = `Before committing, have you captured any valuable lessons from this session?
+Consider: corrections, mistakes, or insights worth remembering.
+
+To capture a lesson:
+  npx learning-agent capture --trigger "what happened" --insight "what to do" --yes`;
+var PRE_COMMIT_HOOK_TEMPLATE = `#!/bin/sh
+# Learning Agent pre-commit hook
+# Reminds Claude to consider capturing lessons before commits
+
+npx learning-agent hooks run pre-commit
+`;
+var CLAUDE_HOOK_MARKER = "learning-agent load-session";
+var CLAUDE_HOOK_CONFIG = {
+  matcher: "startup|resume|compact",
+  hooks: [
+    {
+      type: "command",
+      command: "npx learning-agent load-session 2>/dev/null || true"
+    }
+  ]
+};
+var HOOK_MARKER = "# Learning Agent pre-commit hook";
 var LEARNING_AGENT_SECTION_HEADER = "## Learning Agent Integration";
 var AGENTS_MD_TEMPLATE = `
 ## Learning Agent Integration
@@ -1181,6 +1977,36 @@ var LEARNING_AGENT_HOOK_BLOCK = `
 # Learning Agent pre-commit hook (appended)
 npx learning-agent hooks run pre-commit
 `;
+function findFirstTopLevelExitLine(lines) {
+  let insideFunction = 0;
+  let heredocDelimiter = null;
+  for (let i = 0; i < lines.length; i++) {
+    const line = lines[i] ?? "";
+    const trimmed = line.trim();
+    if (heredocDelimiter !== null) {
+      if (trimmed === heredocDelimiter) {
+        heredocDelimiter = null;
+      }
+      continue;
+    }
+    const heredocMatch = /<<-?\s*['"]?(\w+)['"]?/.exec(line);
+    if (heredocMatch?.[1]) {
+      heredocDelimiter = heredocMatch[1];
+      continue;
+    }
+    for (const char of line) {
+      if (char === "{") insideFunction++;
+      if (char === "}") insideFunction = Math.max(0, insideFunction - 1);
+    }
+    if (insideFunction > 0) {
+      continue;
+    }
+    if (/^\s*exit\s+(\d+|\$\w+|\$\?)\s*$/.test(trimmed)) {
+      return i;
+    }
+  }
+  return -1;
+}
 async function installPreCommitHook(repoRoot) {
   const gitHooksDir = await getGitHooksDir(repoRoot);
   if (!gitHooksDir) {
@@ -1193,7 +2019,16 @@ async function installPreCommitHook(repoRoot) {
     if (hasLearningAgentHook(content)) {
       return false;
     }
-    const newContent = content.trimEnd() + "\n" + LEARNING_AGENT_HOOK_BLOCK;
+    const lines = content.split("\n");
+    const exitLineIndex = findFirstTopLevelExitLine(lines);
+    let newContent;
+    if (exitLineIndex === -1) {
+      newContent = content.trimEnd() + "\n" + LEARNING_AGENT_HOOK_BLOCK;
+    } else {
+      const before = lines.slice(0, exitLineIndex);
+      const after = lines.slice(exitLineIndex);
+      newContent = before.join("\n") + LEARNING_AGENT_HOOK_BLOCK + after.join("\n");
+    }
     await writeFile(hookPath, newContent, "utf-8");
     chmodSync(hookPath, HOOK_FILE_MODE);
     return true;
@@ -1202,72 +2037,12 @@ async function installPreCommitHook(repoRoot) {
   chmodSync(hookPath, HOOK_FILE_MODE);
   return true;
 }
-var program = new Command();
-program.option("-v, --verbose", "Show detailed output").option("-q, --quiet", "Suppress non-essential output");
-program.name("learning-agent").description("Repository-scoped learning system for Claude Code").version(VERSION);
-program.command("init").description("Initialize learning-agent in this repository").option("--skip-agents", "Skip AGENTS.md modification").option("--skip-hooks", "Skip git hooks installation").option("--json", "Output result as JSON").action(async function(options) {
-  const repoRoot = getRepoRoot();
-  const { quiet } = getGlobalOpts(this);
-  await createLessonsDirectory(repoRoot);
-  await createIndexFile(repoRoot);
-  const lessonsDir = dirname(join(repoRoot, LESSONS_PATH));
-  let agentsMdUpdated = false;
-  if (!options.skipAgents) {
-    agentsMdUpdated = await updateAgentsMd(repoRoot);
-  }
-  let hooksInstalled = false;
-  if (!options.skipHooks) {
-    hooksInstalled = await installPreCommitHook(repoRoot);
-  }
-  if (options.json) {
-    console.log(JSON.stringify({
-      initialized: true,
-      lessonsDir,
-      agentsMd: agentsMdUpdated,
-      hooks: hooksInstalled
-    }));
-  } else if (!quiet) {
-    out.success("Learning agent initialized");
-    console.log(`  Lessons directory: ${lessonsDir}`);
-    if (agentsMdUpdated) {
-      console.log("  AGENTS.md: Updated with Learning Agent section");
-    } else if (options.skipAgents) {
-      console.log("  AGENTS.md: Skipped (--skip-agents)");
-    } else {
-      console.log("  AGENTS.md: Already has Learning Agent section");
-    }
-    if (hooksInstalled) {
-      console.log("  Git hooks: pre-commit hook installed");
-    } else if (options.skipHooks) {
-      console.log("  Git hooks: Skipped (--skip-hooks)");
-    } else {
-      console.log("  Git hooks: Already installed or not a git repo");
-    }
+function getClaudeSettingsPath(global) {
+  if (global) {
+    return join(homedir(), ".claude", "settings.json");
   }
-});
-var hooksCommand = program.command("hooks").description("Git hooks management");
-hooksCommand.command("run <hook>").description("Run a hook script (called by git hooks)").option("--json", "Output as JSON").action((hook, options) => {
-  if (hook === "pre-commit") {
-    if (options.json) {
-      console.log(JSON.stringify({ hook: "pre-commit", message: PRE_COMMIT_MESSAGE }));
-    } else {
-      console.log(PRE_COMMIT_MESSAGE);
-    }
-  } else {
-    if (options.json) {
-      console.log(JSON.stringify({ error: `Unknown hook: ${hook}` }));
-    } else {
-      out.error(`Unknown hook: ${hook}`);
-    }
-    process.exit(1);
-  }
-});
-function getClaudeSettingsPath(project) {
-  if (project) {
-    const repoRoot = getRepoRoot();
-    return join(repoRoot, ".claude", "settings.json");
-  }
-  return join(homedir(), ".claude", "settings.json");
+  const repoRoot = getRepoRoot();
+  return join(repoRoot, ".claude", "settings.json");
 }
 async function readClaudeSettings(settingsPath) {
   if (!existsSync(settingsPath)) {
@@ -1311,477 +2086,202 @@ async function writeClaudeSettings(settingsPath, settings) {
   await writeFile(tempPath, JSON.stringify(settings, null, 2) + "\n", "utf-8");
   await rename(tempPath, settingsPath);
 }
-var setupCommand = program.command("setup").description("Setup integrations");
-setupCommand.command("claude").description("Install Claude Code SessionStart hooks").option("--project", "Install to project .claude directory instead of global").option("--uninstall", "Remove learning-agent hooks").option("--dry-run", "Show what would change without writing").option("--json", "Output as JSON").action(async (options) => {
-  const settingsPath = getClaudeSettingsPath(options.project ?? false);
-  const displayPath = options.project ? ".claude/settings.json" : "~/.claude/settings.json";
-  let settings;
-  try {
-    settings = await readClaudeSettings(settingsPath);
-  } catch {
-    if (options.json) {
-      console.log(JSON.stringify({ error: "Failed to parse settings file" }));
-    } else {
-      out.error("Failed to parse settings file. Check if JSON is valid.");
+function registerSetupCommands(program2) {
+  program2.command("init").description("Initialize learning-agent in this repository").option("--skip-agents", "Skip AGENTS.md modification").option("--skip-hooks", "Skip git hooks installation").option("--json", "Output result as JSON").action(async function(options) {
+    const repoRoot = getRepoRoot();
+    const { quiet } = getGlobalOpts(this);
+    await createLessonsDirectory(repoRoot);
+    await createIndexFile(repoRoot);
+    const lessonsDir = dirname(join(repoRoot, LESSONS_PATH));
+    let agentsMdUpdated = false;
+    if (!options.skipAgents) {
+      agentsMdUpdated = await updateAgentsMd(repoRoot);
     }
-    process.exit(1);
-  }
-  const alreadyInstalled = hasClaudeHook(settings);
-  if (options.uninstall) {
-    if (options.dryRun) {
-      if (options.json) {
-        console.log(JSON.stringify({ dryRun: true, wouldRemove: alreadyInstalled, location: displayPath }));
+    let hooksInstalled = false;
+    if (!options.skipHooks) {
+      hooksInstalled = await installPreCommitHook(repoRoot);
+    }
+    if (options.json) {
+      console.log(JSON.stringify({
+        initialized: true,
+        lessonsDir,
+        agentsMd: agentsMdUpdated,
+        hooks: hooksInstalled
+      }));
+    } else if (!quiet) {
+      out.success("Learning agent initialized");
+      console.log(`  Lessons directory: ${lessonsDir}`);
+      if (agentsMdUpdated) {
+        console.log("  AGENTS.md: Updated with Learning Agent section");
+      } else if (options.skipAgents) {
+        console.log("  AGENTS.md: Skipped (--skip-agents)");
       } else {
-        if (alreadyInstalled) {
-          console.log(`Would remove learning-agent hooks from ${displayPath}`);
-        } else {
-          console.log("No learning-agent hooks to remove");
-        }
+        console.log("  AGENTS.md: Already has Learning Agent section");
+      }
+      if (hooksInstalled) {
+        console.log("  Git hooks: pre-commit hook installed");
+      } else if (options.skipHooks) {
+        console.log("  Git hooks: Skipped (--skip-hooks)");
+      } else {
+        console.log("  Git hooks: Already installed or not a git repo");
       }
-      return;
     }
-    const removed = removeLearningAgentHook(settings);
-    if (removed) {
-      await writeClaudeSettings(settingsPath, settings);
+  });
+  const hooksCommand = program2.command("hooks").description("Git hooks management");
+  hooksCommand.command("run <hook>").description("Run a hook script (called by git hooks)").option("--json", "Output as JSON").action((hook, options) => {
+    if (hook === "pre-commit") {
       if (options.json) {
-        console.log(JSON.stringify({ installed: false, location: displayPath, action: "removed" }));
+        console.log(JSON.stringify({ hook: "pre-commit", message: PRE_COMMIT_MESSAGE }));
       } else {
-        out.success("Learning agent hooks removed");
-        console.log(`  Location: ${displayPath}`);
+        console.log(PRE_COMMIT_MESSAGE);
       }
     } else {
       if (options.json) {
-        console.log(JSON.stringify({ installed: false, location: displayPath, action: "unchanged" }));
+        console.log(JSON.stringify({ error: `Unknown hook: ${hook}` }));
       } else {
-        out.info("No learning agent hooks to remove");
+        out.error(`Unknown hook: ${hook}`);
       }
+      process.exit(1);
     }
-    return;
-  }
-  if (options.dryRun) {
-    if (options.json) {
-      console.log(JSON.stringify({ dryRun: true, wouldInstall: !alreadyInstalled, location: displayPath }));
-    } else {
-      if (alreadyInstalled) {
-        console.log("Learning agent hooks already installed");
+  });
+  const setupCommand = program2.command("setup").description("Setup integrations");
+  setupCommand.command("claude").description("Install Claude Code SessionStart hooks").option("--global", "Install to global ~/.claude/ instead of project").option("--uninstall", "Remove learning-agent hooks").option("--dry-run", "Show what would change without writing").option("--json", "Output as JSON").action(async (options) => {
+    const settingsPath = getClaudeSettingsPath(options.global ?? false);
+    const displayPath = options.global ? "~/.claude/settings.json" : ".claude/settings.json";
+    let settings;
+    try {
+      settings = await readClaudeSettings(settingsPath);
+    } catch {
+      if (options.json) {
+        console.log(JSON.stringify({ error: "Failed to parse settings file" }));
       } else {
-        console.log(`Would install learning-agent hooks to ${displayPath}`);
+        out.error("Failed to parse settings file. Check if JSON is valid.");
       }
+      process.exit(1);
     }
-    return;
-  }
-  if (alreadyInstalled) {
-    if (options.json) {
-      console.log(JSON.stringify({
-        installed: true,
-        location: displayPath,
-        hooks: ["SessionStart"],
-        action: "unchanged"
-      }));
-    } else {
-      out.info("Learning agent hooks already installed");
-      console.log(`  Location: ${displayPath}`);
-    }
-    return;
-  }
-  const fileExists = existsSync(settingsPath);
-  addLearningAgentHook(settings);
-  await writeClaudeSettings(settingsPath, settings);
-  if (options.json) {
-    console.log(JSON.stringify({
-      installed: true,
-      location: displayPath,
-      hooks: ["SessionStart"],
-      action: fileExists ? "updated" : "created"
-    }));
-  } else {
-    out.success(options.project ? "Claude Code hooks installed (project-level)" : "Claude Code hooks installed");
-    console.log(`  Location: ${displayPath}`);
-    console.log("  Hook: SessionStart (startup|resume|compact)");
-    console.log("");
-    console.log("Lessons will be loaded automatically at session start.");
-    if (options.project) {
-      console.log("");
-      console.log("Note: Project hooks override global hooks.");
-    }
-  }
-});
-program.command("learn <insight>").description("Capture a new lesson").option("-t, --trigger <text>", "What triggered this lesson").option("--tags <tags>", "Comma-separated tags", "").option("-y, --yes", "Skip confirmation").action(async function(insight, options) {
-  const repoRoot = getRepoRoot();
-  const { quiet } = getGlobalOpts(this);
-  const lesson = {
-    id: generateId(insight),
-    type: "quick",
-    trigger: options.trigger ?? "Manual capture",
-    insight,
-    tags: options.tags ? options.tags.split(",").map((t) => t.trim()) : [],
-    source: "manual",
-    context: {
-      tool: "cli",
-      intent: "manual learning"
-    },
-    created: (/* @__PURE__ */ new Date()).toISOString(),
-    confirmed: true,
-    // learn command is explicit confirmation
-    supersedes: [],
-    related: []
-  };
-  await appendLesson(repoRoot, lesson);
-  out.success(`Learned: ${insight}`);
-  if (!quiet) {
-    console.log(`ID: ${chalk.dim(lesson.id)}`);
-  }
-});
-program.command("search <query>").description("Search lessons by keyword").option("-n, --limit <number>", "Maximum results", DEFAULT_SEARCH_LIMIT).action(async function(query, options) {
-  const repoRoot = getRepoRoot();
-  const limit = parseLimit(options.limit, "limit");
-  const { verbose, quiet } = getGlobalOpts(this);
-  await syncIfNeeded(repoRoot);
-  const results = await searchKeyword(repoRoot, query, limit);
-  if (results.length === 0) {
-    console.log('No lessons match your search. Try a different query or use "list" to see all lessons.');
-    return;
-  }
-  if (!quiet) {
-    out.info(`Found ${results.length} lesson(s):
-`);
-  }
-  for (const lesson of results) {
-    console.log(`[${chalk.cyan(lesson.id)}] ${lesson.insight}`);
-    console.log(`  Trigger: ${lesson.trigger}`);
-    if (verbose && lesson.context) {
-      console.log(`  Context: ${lesson.context.tool} - ${lesson.context.intent}`);
-      console.log(`  Created: ${lesson.created}`);
-    }
-    if (lesson.tags.length > 0) {
-      console.log(`  Tags: ${lesson.tags.join(", ")}`);
-    }
-    console.log();
-  }
-});
-program.command("list").description("List all lessons").option("-n, --limit <number>", "Maximum results", DEFAULT_LIST_LIMIT).action(async function(options) {
-  const repoRoot = getRepoRoot();
-  const limit = parseLimit(options.limit, "limit");
-  const { verbose, quiet } = getGlobalOpts(this);
-  const { lessons, skippedCount } = await readLessons(repoRoot);
-  if (lessons.length === 0) {
-    console.log('No lessons found. Get started with: learn "Your first lesson"');
-    if (skippedCount > 0) {
-      out.warn(`${skippedCount} corrupted lesson(s) skipped.`);
-    }
-    return;
-  }
-  const toShow = lessons.slice(0, limit);
-  if (!quiet) {
-    out.info(`Showing ${toShow.length} of ${lessons.length} lesson(s):
-`);
-  }
-  for (const lesson of toShow) {
-    console.log(`[${chalk.cyan(lesson.id)}] ${lesson.insight}`);
-    if (verbose) {
-      console.log(`  Type: ${lesson.type} | Source: ${lesson.source}`);
-      console.log(`  Created: ${lesson.created}`);
-      if (lesson.context) {
-        console.log(`  Context: ${lesson.context.tool} - ${lesson.context.intent}`);
+    const alreadyInstalled = hasClaudeHook(settings);
+    if (options.uninstall) {
+      if (options.dryRun) {
+        if (options.json) {
+          console.log(JSON.stringify({ dryRun: true, wouldRemove: alreadyInstalled, location: displayPath }));
+        } else {
+          if (alreadyInstalled) {
+            console.log(`Would remove learning-agent hooks from ${displayPath}`);
+          } else {
+            console.log("No learning-agent hooks to remove");
+          }
+        }
+        return;
       }
-    } else {
-      console.log(`  Type: ${lesson.type} | Source: ${lesson.source}`);
-    }
-    if (lesson.tags.length > 0) {
-      console.log(`  Tags: ${lesson.tags.join(", ")}`);
-    }
-    console.log();
-  }
-  if (skippedCount > 0) {
-    out.warn(`${skippedCount} corrupted lesson(s) skipped.`);
-  }
-});
-program.command("rebuild").description("Rebuild SQLite index from JSONL").option("-f, --force", "Force rebuild even if unchanged").action(async (options) => {
-  const repoRoot = getRepoRoot();
-  if (options.force) {
-    console.log("Forcing index rebuild...");
-    await rebuildIndex(repoRoot);
-    console.log("Index rebuilt.");
-  } else {
-    const rebuilt = await syncIfNeeded(repoRoot);
-    if (rebuilt) {
-      console.log("Index rebuilt (JSONL changed).");
-    } else {
-      console.log("Index is up to date.");
-    }
-  }
-});
-program.command("detect").description("Detect learning triggers from input").requiredOption("--input <file>", "Path to JSON input file").option("--save", "Save proposed lesson (requires --yes)").option("-y, --yes", "Confirm save (required with --save)").option("--json", "Output result as JSON").action(
-  async (options) => {
-    const repoRoot = getRepoRoot();
-    if (options.save && !options.yes) {
-      if (options.json) {
-        console.log(JSON.stringify({ error: "--save requires --yes flag for confirmation" }));
+      const removed = removeLearningAgentHook(settings);
+      if (removed) {
+        await writeClaudeSettings(settingsPath, settings);
+        if (options.json) {
+          console.log(JSON.stringify({ installed: false, location: displayPath, action: "removed" }));
+        } else {
+          out.success("Learning agent hooks removed");
+          console.log(`  Location: ${displayPath}`);
+        }
       } else {
-        out.error("--save requires --yes flag for confirmation");
-        console.log("Use: detect --input <file> --save --yes");
+        if (options.json) {
+          console.log(JSON.stringify({ installed: false, location: displayPath, action: "unchanged" }));
+        } else {
+          out.info("No learning agent hooks to remove");
+          if (options.global) {
+            console.log("  Hint: Try without --global to check project settings.");
+          } else {
+            console.log("  Hint: Try with --global flag to check global settings.");
+          }
+        }
       }
-      process.exit(1);
+      return;
     }
-    const input = await parseInputFile(options.input);
-    const result = await detectAndPropose(repoRoot, input);
-    if (!result) {
+    if (options.dryRun) {
       if (options.json) {
-        console.log(JSON.stringify({ detected: false }));
+        console.log(JSON.stringify({ dryRun: true, wouldInstall: !alreadyInstalled, location: displayPath }));
       } else {
-        console.log("No learning trigger detected.");
+        if (alreadyInstalled) {
+          console.log("Learning agent hooks already installed");
+        } else {
+          console.log(`Would install learning-agent hooks to ${displayPath}`);
+        }
       }
       return;
     }
-    if (options.json) {
-      console.log(JSON.stringify({ detected: true, ...result }));
-      return;
-    }
-    console.log("Learning trigger detected!");
-    console.log(`  Trigger: ${result.trigger}`);
-    console.log(`  Source: ${result.source}`);
-    console.log(`  Proposed: ${result.proposedInsight}`);
-    if (options.save && options.yes) {
-      const lesson = {
-        id: generateId(result.proposedInsight),
-        type: "quick",
-        trigger: result.trigger,
-        insight: result.proposedInsight,
-        tags: [],
-        source: result.source,
-        context: { tool: "detect", intent: "auto-capture" },
-        created: (/* @__PURE__ */ new Date()).toISOString(),
-        confirmed: true,
-        // --yes confirms the lesson
-        supersedes: [],
-        related: []
-      };
-      await appendLesson(repoRoot, lesson);
-      console.log(`
-Saved as lesson: ${lesson.id}`);
-    }
-  }
-);
-program.command("capture").description("Capture a lesson from trigger/insight or input file").option("-t, --trigger <text>", "What triggered this lesson").option("-i, --insight <text>", "The insight or lesson learned").option("--input <file>", "Path to JSON input file (alternative to trigger/insight)").option("--json", "Output result as JSON").option("-y, --yes", "Skip confirmation and save immediately").action(async function(options) {
-  const repoRoot = getRepoRoot();
-  const { verbose } = getGlobalOpts(this);
-  let lesson;
-  if (options.input) {
-    const input = await parseInputFile(options.input);
-    const result = await detectAndPropose(repoRoot, input);
-    if (!result) {
-      options.json ? console.log(JSON.stringify({ detected: false, saved: false })) : console.log("No learning trigger detected.");
+    if (alreadyInstalled) {
+      if (options.json) {
+        console.log(JSON.stringify({
+          installed: true,
+          location: displayPath,
+          hooks: ["SessionStart"],
+          action: "unchanged"
+        }));
+      } else {
+        out.info("Learning agent hooks already installed");
+        console.log(`  Location: ${displayPath}`);
+      }
       return;
     }
-    lesson = createLessonFromInputFile(result, options.yes ?? false);
-  } else if (options.trigger && options.insight) {
-    lesson = createLessonFromFlags(options.trigger, options.insight, options.yes ?? false);
-  } else {
-    const msg = "Provide either --trigger and --insight, or --input file.";
-    options.json ? console.log(JSON.stringify({ error: msg, saved: false })) : out.error(msg);
-    process.exit(1);
-  }
-  if (!options.yes && !process.stdin.isTTY) {
-    if (options.json) {
-      console.log(JSON.stringify({ error: "--yes required in non-interactive mode", saved: false }));
-    } else {
-      out.error("--yes required in non-interactive mode");
-      console.log('Use: capture --trigger "..." --insight "..." --yes');
-    }
-    process.exit(1);
-  }
-  if (options.json) {
-    if (options.yes) await appendLesson(repoRoot, lesson);
-    outputCaptureJson(lesson, options.yes ?? false);
-  } else if (options.yes) {
-    await appendLesson(repoRoot, lesson);
-    out.success(`Lesson saved: ${lesson.id}`);
-    if (verbose) console.log(`  Type: ${lesson.type} | Trigger: ${lesson.trigger}`);
-  } else {
-    outputCapturePreview(lesson);
-  }
-});
-program.command("compact").description("Compact lessons: archive old lessons and remove tombstones").option("-f, --force", "Run compaction even if below threshold").option("--dry-run", "Show what would be done without making changes").action(async (options) => {
-  const repoRoot = getRepoRoot();
-  const tombstones = await countTombstones(repoRoot);
-  const needs = await needsCompaction(repoRoot);
-  if (options.dryRun) {
-    console.log("Dry run - no changes will be made.\n");
-    console.log(`Tombstones found: ${tombstones}`);
-    console.log(`Compaction needed: ${needs ? "yes" : "no"}`);
-    return;
-  }
-  if (!needs && !options.force) {
-    console.log(`Compaction not needed (${tombstones} tombstones, threshold is ${TOMBSTONE_THRESHOLD}).`);
-    console.log("Use --force to compact anyway.");
-    return;
-  }
-  console.log("Running compaction...");
-  const result = await compact(repoRoot);
-  console.log("\nCompaction complete:");
-  console.log(`  Archived: ${result.archived} lesson(s)`);
-  console.log(`  Tombstones removed: ${result.tombstonesRemoved}`);
-  console.log(`  Lessons remaining: ${result.lessonsRemaining}`);
-  await rebuildIndex(repoRoot);
-  console.log("  Index rebuilt.");
-});
-program.command("export").description("Export lessons as JSON to stdout").option("--since <date>", "Only include lessons created after this date (ISO8601)").option("--tags <tags>", "Filter by tags (comma-separated, OR logic)").action(async (options) => {
-  const repoRoot = getRepoRoot();
-  const { lessons } = await readLessons(repoRoot);
-  let filtered = lessons;
-  if (options.since) {
-    const sinceDate = new Date(options.since);
-    if (Number.isNaN(sinceDate.getTime())) {
-      console.error(`Invalid date format: ${options.since}. Use ISO8601 format (e.g., 2024-01-15).`);
-      process.exit(1);
-    }
-    filtered = filtered.filter((lesson) => new Date(lesson.created) >= sinceDate);
-  }
-  if (options.tags) {
-    const filterTags = options.tags.split(",").map((t) => t.trim());
-    filtered = filtered.filter((lesson) => lesson.tags.some((tag) => filterTags.includes(tag)));
-  }
-  console.log(JSON.stringify(filtered, null, JSON_INDENT_SPACES));
-});
-program.command("import <file>").description("Import lessons from a JSONL file").action(async (file) => {
-  const repoRoot = getRepoRoot();
-  let content;
-  try {
-    const { readFile: readFile5 } = await import('fs/promises');
-    content = await readFile5(file, "utf-8");
-  } catch (err) {
-    const code = err.code;
-    if (code === "ENOENT") {
-      console.error(`Error: File not found: ${file}`);
-    } else {
-      console.error(`Error reading file: ${err.message}`);
-    }
-    process.exit(1);
-  }
-  const { lessons: existingLessons } = await readLessons(repoRoot);
-  const existingIds = new Set(existingLessons.map((l) => l.id));
-  const lines = content.split("\n");
-  let imported = 0;
-  let skipped = 0;
-  let invalid = 0;
-  for (const line of lines) {
-    const trimmed = line.trim();
-    if (!trimmed) continue;
-    let parsed;
-    try {
-      parsed = JSON.parse(trimmed);
-    } catch {
-      invalid++;
-      continue;
-    }
-    const result = LessonSchema.safeParse(parsed);
-    if (!result.success) {
-      invalid++;
-      continue;
-    }
-    const lesson = result.data;
-    if (existingIds.has(lesson.id)) {
-      skipped++;
-      continue;
-    }
-    await appendLesson(repoRoot, lesson);
-    existingIds.add(lesson.id);
-    imported++;
-  }
-  const lessonWord = imported === 1 ? "lesson" : "lessons";
-  const parts = [];
-  if (skipped > 0) parts.push(`${skipped} skipped`);
-  if (invalid > 0) parts.push(`${invalid} invalid`);
-  if (parts.length > 0) {
-    console.log(`Imported ${imported} ${lessonWord} (${parts.join(", ")})`);
-  } else {
-    console.log(`Imported ${imported} ${lessonWord}`);
-  }
-});
-program.command("stats").description("Show database health and statistics").action(async () => {
-  const repoRoot = getRepoRoot();
-  await syncIfNeeded(repoRoot);
-  const { lessons } = await readLessons(repoRoot);
-  const deletedCount = await countTombstones(repoRoot);
-  const totalLessons = lessons.length;
-  const retrievalStats = getRetrievalStats(repoRoot);
-  const totalRetrievals = retrievalStats.reduce((sum, s) => sum + s.count, 0);
-  const avgRetrievals = totalLessons > 0 ? (totalRetrievals / totalLessons).toFixed(AVG_DECIMAL_PLACES) : "0.0";
-  const jsonlPath = join(repoRoot, LESSONS_PATH);
-  const dbPath = join(repoRoot, DB_PATH);
-  let dataSize = 0;
-  let indexSize = 0;
-  try {
-    dataSize = statSync(jsonlPath).size;
-  } catch {
-  }
-  try {
-    indexSize = statSync(dbPath).size;
-  } catch {
-  }
-  const totalSize = dataSize + indexSize;
-  const deletedInfo = deletedCount > 0 ? ` (${deletedCount} deleted)` : "";
-  console.log(`Lessons: ${totalLessons} total${deletedInfo}`);
-  console.log(`Retrievals: ${totalRetrievals} total, ${avgRetrievals} avg per lesson`);
-  console.log(`Storage: ${formatBytes(totalSize)} (index: ${formatBytes(indexSize)}, data: ${formatBytes(dataSize)})`);
-});
-program.command("load-session").description("Load high-severity lessons for session context").option("--json", "Output as JSON").action(async function(options) {
-  const repoRoot = getRepoRoot();
-  const { quiet } = getGlobalOpts(this);
-  const lessons = await loadSessionLessons(repoRoot);
-  if (options.json) {
-    console.log(JSON.stringify({ lessons, count: lessons.length }));
-    return;
-  }
-  if (lessons.length === 0) {
-    console.log("No high-severity lessons found.");
-    return;
-  }
-  outputSessionLessonsHuman(lessons, quiet);
-});
-program.command("check-plan").description("Check plan against relevant lessons").option("--plan <text>", "Plan text to check").option("--json", "Output as JSON").option("-n, --limit <number>", "Maximum results", DEFAULT_CHECK_PLAN_LIMIT).action(async function(options) {
-  const repoRoot = getRepoRoot();
-  const limit = parseLimit(options.limit, "limit");
-  const { quiet } = getGlobalOpts(this);
-  const planText = options.plan ?? await readPlanFromStdin();
-  if (!planText) {
-    out.error("No plan provided. Use --plan <text> or pipe text to stdin.");
-    process.exit(1);
-  }
-  if (!isModelAvailable()) {
+    const fileExists = existsSync(settingsPath);
+    addLearningAgentHook(settings);
+    await writeClaudeSettings(settingsPath, settings);
     if (options.json) {
       console.log(JSON.stringify({
-        error: "Embedding model not available",
-        action: "Run: npx learning-agent download-model"
+        installed: true,
+        location: displayPath,
+        hooks: ["SessionStart"],
+        action: fileExists ? "updated" : "created"
       }));
     } else {
-      out.error("Embedding model not available");
+      out.success(options.global ? "Claude Code hooks installed (global)" : "Claude Code hooks installed (project-level)");
+      console.log(`  Location: ${displayPath}`);
+      console.log("  Hook: SessionStart (startup|resume|compact)");
       console.log("");
-      console.log("Run: npx learning-agent download-model");
+      console.log("Lessons will be loaded automatically at session start.");
+      if (!options.global) {
+        console.log("");
+        console.log("Note: Project hooks override global hooks.");
+      }
     }
-    process.exit(1);
-  }
-  try {
-    const result = await retrieveForPlan(repoRoot, planText, limit);
-    if (options.json) {
-      outputCheckPlanJson(result.lessons);
+  });
+  program2.command("download-model").description("Download the embedding model for semantic search").option("--json", "Output as JSON").action(async (options) => {
+    const alreadyExisted = isModelAvailable();
+    if (alreadyExisted) {
+      const modelPath2 = join(homedir(), ".node-llama-cpp", "models", MODEL_FILENAME);
+      const size2 = statSync(modelPath2).size;
+      if (options.json) {
+        console.log(JSON.stringify({ success: true, path: modelPath2, size: size2, alreadyExisted: true }));
+      } else {
+        console.log("Model already exists.");
+        console.log(`Path: ${modelPath2}`);
+        console.log(`Size: ${formatBytes(size2)}`);
+      }
       return;
     }
-    if (result.lessons.length === 0) {
-      console.log("No relevant lessons found for this plan.");
-      return;
+    if (!options.json) {
+      console.log("Downloading embedding model...");
     }
-    outputCheckPlanHuman(result.lessons, quiet);
-  } catch (err) {
-    const message = err instanceof Error ? err.message : "Unknown error";
+    const modelPath = await resolveModel({ cli: !options.json });
+    const size = statSync(modelPath).size;
     if (options.json) {
-      console.log(JSON.stringify({ error: message }));
+      console.log(JSON.stringify({ success: true, path: modelPath, size, alreadyExisted: false }));
     } else {
-      out.error(`Failed to check plan: ${message}`);
+      console.log(`
+Model downloaded successfully!`);
+      console.log(`Path: ${modelPath}`);
+      console.log(`Size: ${formatBytes(size)}`);
     }
-    process.exit(1);
-  }
-});
+  });
+}
+
+// src/cli.ts
+var program = new Command();
+program.option("-v, --verbose", "Show detailed output").option("-q, --quiet", "Suppress non-essential output");
+program.name("learning-agent").description("Repository-scoped learning system for Claude Code").version(VERSION);
+registerCaptureCommands(program);
+registerRetrievalCommands(program);
+registerManagementCommands(program);
+registerSetupCommands(program);
 program.parse();
 //# sourceMappingURL=cli.js.map
 //# sourceMappingURL=cli.js.map