kirograph 0.28.1 → 1.0.0

package/dist/bin/installer/targets/opencode.js.map

@@ -1,7 +1,7 @@
 {
   "version": 3,
   "sources": ["../../../../src/bin/installer/targets/opencode.ts"],
-  "sourcesContent": ["/**\n * OpenCode target.\n *\n * MCP: .opencode.json (mcp field with type: \"local\")\n * Hooks: .opencode/plugins/kirograph-sync.js (JS plugin)\n * Instructions: .opencode.json (instructions field)\n */\n\nimport * as fs from 'fs';\nimport * as path from 'path';\nimport { ensureDir, buildInstructionOpts, readJson, writeJson, LateInstallOptions } from '../common';\nimport { buildAgentInstructions } from '../instructions';\n\nconst OPENCODE_CONFIG = '.opencode.json';\nconst OPENCODE_MCP_NAME = 'kirograph';\nconst OPENCODE_INSTRUCTIONS_PATH = '.kirograph/opencode.md';\nconst OPENCODE_PLUGIN_FILE = 'kirograph-sync.js';\n\nconst OPENCODE_PLUGIN_CONTENT = `/**\n * KiroGraph auto-sync plugin for OpenCode.\n * Syncs the KiroGraph index when the agent session goes idle.\n */\nexport const KirographSync = async ({ $ }) => {\n  return {\n    event: async ({ event }) => {\n      if (event.type === \"session.idle\") {\n        await $\\`kirograph sync --quiet 2>/dev/null || true\\`\n      }\n    },\n  }\n}\n`;\n\nexport function installOpenCodeEarly(projectRoot: string): void {\n  const configPath = path.join(projectRoot, OPENCODE_CONFIG);\n  const config = readJson(configPath);\n\n  config.mcp = config.mcp ?? {};\n  config.mcp[OPENCODE_MCP_NAME] = {\n    type: 'local',\n    command: ['kirograph', 'serve', '--mcp'],\n    enabled: true,\n  };\n\n  if (!config.$schema) {\n    config.$schema = 'https://opencode.ai/config.json';\n  }\n\n  writeJson(configPath, config);\n  console.log(`  \u2713 OpenCode MCP server registered in ${configPath}`);\n}\n\nexport function installOpenCodeLate(projectRoot: string, opts: LateInstallOptions): void {\n  const instructionOpts = buildInstructionOpts(opts, true);\n\n  const instructionsPath = path.join(projectRoot, '.kirograph', 'opencode.md');\n  ensureDir(path.dirname(instructionsPath));\n  fs.writeFileSync(instructionsPath, buildAgentInstructions(instructionOpts));\n  console.log(`  \u2713 OpenCode instructions written to ${instructionsPath}`);\n\n  // Add instructions reference to .opencode.json\n  const configPath = path.join(projectRoot, OPENCODE_CONFIG);\n  const config = readJson(configPath);\n\n  const instructions: string[] = config.instructions ?? [];\n  if (!instructions.includes(OPENCODE_INSTRUCTIONS_PATH)) {\n    instructions.push(OPENCODE_INSTRUCTIONS_PATH);\n  }\n  config.instructions = instructions;\n  writeJson(configPath, config);\n  console.log(`  \u2713 OpenCode instructions referenced in ${configPath}`);\n\n  // Write sync plugin\n  const pluginsDir = path.join(projectRoot, '.opencode', 'plugins');\n  ensureDir(pluginsDir);\n  const pluginPath = path.join(pluginsDir, OPENCODE_PLUGIN_FILE);\n  fs.writeFileSync(pluginPath, OPENCODE_PLUGIN_CONTENT);\n  console.log(`  \u2713 OpenCode sync plugin written to ${pluginPath}`);\n}\n\nexport function uninitOpenCode(projectRoot: string): void {\n  const configPath = path.join(projectRoot, OPENCODE_CONFIG);\n  if (fs.existsSync(configPath)) {\n    const config = readJson(configPath);\n    let changed = false;\n\n    // Remove MCP entry\n    if (config.mcp?.[OPENCODE_MCP_NAME]) {\n      delete config.mcp[OPENCODE_MCP_NAME];\n      if (Object.keys(config.mcp).length === 0) delete config.mcp;\n      changed = true;\n      console.log(`  \u2713 Removed kirograph from .opencode.json mcp`);\n    }\n\n    // Remove instructions reference\n    if (Array.isArray(config.instructions)) {\n      const idx = config.instructions.indexOf(OPENCODE_INSTRUCTIONS_PATH);\n      if (idx !== -1) {\n        config.instructions.splice(idx, 1);\n        if (config.instructions.length === 0) delete config.instructions;\n        changed = true;\n        console.log(`  \u2713 Removed kirograph instructions from .opencode.json`);\n      }\n    }\n\n    if (changed) writeJson(configPath, config);\n  }\n\n  // Remove plugin\n  const pluginPath = path.join(projectRoot, '.opencode', 'plugins', OPENCODE_PLUGIN_FILE);\n  if (fs.existsSync(pluginPath)) {\n    fs.unlinkSync(pluginPath);\n    console.log(`  \u2713 Removed OpenCode sync plugin`);\n  }\n}\n\nexport function printOpenCodeNextSteps(): void {\n  console.log('\\n  Done! Restart OpenCode for the MCP server and sync plugin to load.');\n  console.log('  MCP and instructions are in .opencode.json');\n  console.log('  Auto-sync plugin is in .opencode/plugins/kirograph-sync.js\\n');\n}\n"],
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+  "sourcesContent": ["/**\n * OpenCode target.\n *\n * MCP: .opencode.json (mcp field with type: \"local\")\n * Hooks: .opencode/plugins/kirograph-sync.js (JS plugin)\n * Instructions: .opencode.json (instructions field)\n */\n\nimport * as fs from 'fs';\nimport * as path from 'path';\nimport { ensureDir, buildInstructionOpts, readJson, writeJson, silentCommand, LateInstallOptions } from '../common';\nimport { buildAgentInstructions } from '../instructions';\n\nconst OPENCODE_CONFIG = '.opencode.json';\nconst OPENCODE_MCP_NAME = 'kirograph';\nconst OPENCODE_INSTRUCTIONS_PATH = '.kirograph/opencode.md';\nconst OPENCODE_PLUGIN_FILE = 'kirograph-sync.js';\n\n// Built per-platform so the embedded shell command works whether OpenCode's\n// `$` shell resolves to POSIX sh or Windows cmd.exe (see issue #40).\nconst OPENCODE_PLUGIN_CONTENT = `/**\n * KiroGraph auto-sync plugin for OpenCode.\n * Syncs the KiroGraph index when the agent session goes idle.\n */\nexport const KirographSync = async ({ $ }) => {\n  return {\n    event: async ({ event }) => {\n      if (event.type === \"session.idle\") {\n        await $\\`${silentCommand('kirograph sync --quiet')}\\`\n      }\n    },\n  }\n}\n`;\n\nexport function installOpenCodeEarly(projectRoot: string): void {\n  const configPath = path.join(projectRoot, OPENCODE_CONFIG);\n  const config = readJson(configPath);\n\n  config.mcp = config.mcp ?? {};\n  config.mcp[OPENCODE_MCP_NAME] = {\n    type: 'local',\n    command: ['kirograph', 'serve', '--mcp'],\n    enabled: true,\n  };\n\n  if (!config.$schema) {\n    config.$schema = 'https://opencode.ai/config.json';\n  }\n\n  writeJson(configPath, config);\n  console.log(`  \u2713 OpenCode MCP server registered in ${configPath}`);\n}\n\nexport function installOpenCodeLate(projectRoot: string, opts: LateInstallOptions): void {\n  const instructionOpts = buildInstructionOpts(opts, true);\n\n  const instructionsPath = path.join(projectRoot, '.kirograph', 'opencode.md');\n  ensureDir(path.dirname(instructionsPath));\n  fs.writeFileSync(instructionsPath, buildAgentInstructions(instructionOpts));\n  console.log(`  \u2713 OpenCode instructions written to ${instructionsPath}`);\n\n  // Add instructions reference to .opencode.json\n  const configPath = path.join(projectRoot, OPENCODE_CONFIG);\n  const config = readJson(configPath);\n\n  const instructions: string[] = config.instructions ?? [];\n  if (!instructions.includes(OPENCODE_INSTRUCTIONS_PATH)) {\n    instructions.push(OPENCODE_INSTRUCTIONS_PATH);\n  }\n  config.instructions = instructions;\n  writeJson(configPath, config);\n  console.log(`  \u2713 OpenCode instructions referenced in ${configPath}`);\n\n  // Write sync plugin\n  const pluginsDir = path.join(projectRoot, '.opencode', 'plugins');\n  ensureDir(pluginsDir);\n  const pluginPath = path.join(pluginsDir, OPENCODE_PLUGIN_FILE);\n  fs.writeFileSync(pluginPath, OPENCODE_PLUGIN_CONTENT);\n  console.log(`  \u2713 OpenCode sync plugin written to ${pluginPath}`);\n}\n\nexport function uninitOpenCode(projectRoot: string): void {\n  const configPath = path.join(projectRoot, OPENCODE_CONFIG);\n  if (fs.existsSync(configPath)) {\n    const config = readJson(configPath);\n    let changed = false;\n\n    // Remove MCP entry\n    if (config.mcp?.[OPENCODE_MCP_NAME]) {\n      delete config.mcp[OPENCODE_MCP_NAME];\n      if (Object.keys(config.mcp).length === 0) delete config.mcp;\n      changed = true;\n      console.log(`  \u2713 Removed kirograph from .opencode.json mcp`);\n    }\n\n    // Remove instructions reference\n    if (Array.isArray(config.instructions)) {\n      const idx = config.instructions.indexOf(OPENCODE_INSTRUCTIONS_PATH);\n      if (idx !== -1) {\n        config.instructions.splice(idx, 1);\n        if (config.instructions.length === 0) delete config.instructions;\n        changed = true;\n        console.log(`  \u2713 Removed kirograph instructions from .opencode.json`);\n      }\n    }\n\n    if (changed) writeJson(configPath, config);\n  }\n\n  // Remove plugin\n  const pluginPath = path.join(projectRoot, '.opencode', 'plugins', OPENCODE_PLUGIN_FILE);\n  if (fs.existsSync(pluginPath)) {\n    fs.unlinkSync(pluginPath);\n    console.log(`  \u2713 Removed OpenCode sync plugin`);\n  }\n}\n\nexport function printOpenCodeNextSteps(): void {\n  console.log('\\n  Done! Restart OpenCode for the MCP server and sync plugin to load.');\n  console.log('  MCP and instructions are in .opencode.json');\n  console.log('  Auto-sync plugin is in .opencode/plugins/kirograph-sync.js\\n');\n}\n"],
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package/dist/bin/installer/targets/windsurf.js

@@ -43,7 +43,7 @@ function buildWindsurfHooks() {
   return {
     hooks: {
       post_cascade_response: [
-        { command: "kirograph sync --quiet 2>/dev/null || true", show_output: false }
+        { command: (0, import_common.silentCommand)("kirograph sync --quiet"), show_output: false }
       ]
     }
   };

package/dist/bin/installer/targets/windsurf.js.map

@@ -1,7 +1,7 @@
 {
   "version": 3,
   "sources": ["../../../../src/bin/installer/targets/windsurf.ts"],
-  "sourcesContent": ["/**\n * Windsurf target.\n *\n * MCP: user-scoped at ~/.codeium/windsurf/mcp_config.json (print instructions)\n * Rules: .windsurf/rules/kirograph.md (workspace-level, with frontmatter)\n * Hooks: .windsurf/hooks.json (workspace-level)\n */\n\nimport * as fs from 'fs';\nimport * as path from 'path';\nimport { CavemanMode } from '../caveman';\nimport {\n  ensureDir,\n  buildInstructionOpts,\n  readJson,\n  writeJson,\n  printMcpSetup,\n  KIROGRAPH_COMMAND,\n  KIROGRAPH_MCP_ARGS,\n  KIROGRAPH_SERVER_NAME,\n  LateInstallOptions,\n} from '../common';\nimport { buildAgentInstructions } from '../instructions';\n\nconst WINDSURF_RULES_FILE = 'kirograph.md';\n\nfunction buildWindsurfHooks(): object {\n  return {\n    hooks: {\n      post_cascade_response: [\n        { command: 'kirograph sync --quiet 2>/dev/null || true', show_output: false },\n      ],\n    },\n  };\n}\n\nfunction buildWindsurfRule(instructions: string): string {\n  const frontmatter = [\n    '---',\n    'trigger: always_on',\n    '---',\n    '',\n  ].join('\\n');\n  return frontmatter + instructions;\n}\n\nexport function installWindsurfEarly(_projectRoot: string): void {\n  // Write MCP config to user-scoped ~/.codeium/windsurf/mcp_config.json\n  const home = process.env.HOME || process.env.USERPROFILE || '';\n  const mcpPath = path.join(home, '.codeium', 'windsurf', 'mcp_config.json');\n  ensureDir(path.dirname(mcpPath));\n  const existing = readJson(mcpPath);\n  existing.mcpServers = existing.mcpServers ?? {};\n  if (existing.mcpServers[KIROGRAPH_SERVER_NAME]) {\n    console.log(`  \u2713 Windsurf MCP already configured in ${mcpPath}`);\n    return;\n  }\n  existing.mcpServers[KIROGRAPH_SERVER_NAME] = {\n    command: KIROGRAPH_COMMAND,\n    args: KIROGRAPH_MCP_ARGS,\n  };\n  writeJson(mcpPath, existing);\n  console.log(`  \u2713 Windsurf MCP server registered in ${mcpPath}`);\n}\n\nexport function installWindsurfLate(projectRoot: string, opts: LateInstallOptions): void {\n  const instructionOpts = buildInstructionOpts(opts, true);\n\n  const instructionsPath = path.join(projectRoot, '.kirograph', 'windsurf.md');\n  ensureDir(path.dirname(instructionsPath));\n  fs.writeFileSync(instructionsPath, buildAgentInstructions(instructionOpts));\n  console.log(`  \u2713 Windsurf instructions written to ${instructionsPath}`);\n\n  // Write rules file inside .windsurf/rules/ with frontmatter\n  const rulesDir = path.join(projectRoot, '.windsurf', 'rules');\n  ensureDir(rulesDir);\n  const rulePath = path.join(rulesDir, WINDSURF_RULES_FILE);\n  fs.writeFileSync(rulePath, buildWindsurfRule(buildAgentInstructions(instructionOpts)));\n  console.log(`  \u2713 Windsurf rule written to ${rulePath}`);\n\n  // Remove legacy .windsurfrules if it exists and was created by us\n  const legacyPath = path.join(projectRoot, '.windsurfrules');\n  if (fs.existsSync(legacyPath)) {\n    const content = fs.readFileSync(legacyPath, 'utf8');\n    if (content.includes('kirograph')) {\n      fs.unlinkSync(legacyPath);\n      console.log(`  \u2713 Removed legacy .windsurfrules (migrated to .windsurf/rules/)`);\n    }\n  }\n\n  // Write hooks\n  const hooksPath = path.join(projectRoot, '.windsurf', 'hooks.json');\n  const existing = readJson(hooksPath);\n  const kgHooks = buildWindsurfHooks() as any;\n  existing.hooks = existing.hooks ?? {};\n  for (const [event, commands] of Object.entries(kgHooks.hooks)) {\n    existing.hooks[event] = existing.hooks[event] ?? [];\n    for (const cmd of commands as Array<{ command: string; show_output: boolean }>) {\n      if (!existing.hooks[event].some((h: any) => h.command === cmd.command)) {\n        existing.hooks[event].push(cmd);\n      }\n    }\n  }\n  writeJson(hooksPath, existing);\n  console.log(`  \u2713 Windsurf hooks written to ${hooksPath}`);\n}\n\nexport function uninitWindsurf(projectRoot: string): void {\n  // Remove user-scoped MCP config\n  const home = process.env.HOME || process.env.USERPROFILE || '';\n  const mcpPath = path.join(home, '.codeium', 'windsurf', 'mcp_config.json');\n  if (fs.existsSync(mcpPath)) {\n    const config = readJson(mcpPath);\n    if (config.mcpServers?.[KIROGRAPH_SERVER_NAME]) {\n      delete config.mcpServers[KIROGRAPH_SERVER_NAME];\n      if (Object.keys(config.mcpServers).length === 0) delete config.mcpServers;\n      writeJson(mcpPath, config);\n      console.log(`  \u2713 Removed kirograph from ${mcpPath}`);\n    }\n  }\n\n  // Remove rule file\n  const rulePath = path.join(projectRoot, '.windsurf', 'rules', WINDSURF_RULES_FILE);\n  if (fs.existsSync(rulePath)) {\n    fs.unlinkSync(rulePath);\n    console.log(`  \u2713 Removed .windsurf/rules/${WINDSURF_RULES_FILE}`);\n  }\n\n  // Remove legacy .windsurfrules block\n  const legacyPath = path.join(projectRoot, '.windsurfrules');\n  if (fs.existsSync(legacyPath)) {\n    const content = fs.readFileSync(legacyPath, 'utf8');\n    if (content.includes('kirograph')) {\n      fs.unlinkSync(legacyPath);\n      console.log(`  \u2713 Removed legacy .windsurfrules`);\n    }\n  }\n\n  // Remove kirograph hooks\n  const hooksPath = path.join(projectRoot, '.windsurf', 'hooks.json');\n  if (fs.existsSync(hooksPath)) {\n    const config = readJson(hooksPath);\n    if (config.hooks) {\n      let changed = false;\n      for (const event of Object.keys(config.hooks)) {\n        const before = config.hooks[event].length;\n        config.hooks[event] = config.hooks[event].filter((h: any) => !h.command?.includes('kirograph'));\n        if (config.hooks[event].length === 0) delete config.hooks[event];\n        if (config.hooks[event]?.length !== before) changed = true;\n      }\n      if (Object.keys(config.hooks).length === 0) delete config.hooks;\n      if (changed) {\n        writeJson(hooksPath, config);\n        console.log(`  \u2713 Removed kirograph hooks from .windsurf/hooks.json`);\n      }\n    }\n  }\n}\n\nexport function printWindsurfNextSteps(_projectRoot: string): void {\n  const home = process.env.HOME || process.env.USERPROFILE || '';\n  const mcpPath = path.join(home, '.codeium', 'windsurf', 'mcp_config.json');\n  console.log('\\n  Done! 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+  "sourcesContent": ["/**\n * Windsurf target.\n *\n * MCP: user-scoped at ~/.codeium/windsurf/mcp_config.json (print instructions)\n * Rules: .windsurf/rules/kirograph.md (workspace-level, with frontmatter)\n * Hooks: .windsurf/hooks.json (workspace-level)\n */\n\nimport * as fs from 'fs';\nimport * as path from 'path';\nimport { CavemanMode } from '../caveman';\nimport {\n  ensureDir,\n  buildInstructionOpts,\n  readJson,\n  writeJson,\n  printMcpSetup,\n  KIROGRAPH_COMMAND,\n  KIROGRAPH_MCP_ARGS,\n  KIROGRAPH_SERVER_NAME,\n  silentCommand,\n  LateInstallOptions,\n} from '../common';\nimport { buildAgentInstructions } from '../instructions';\n\nconst WINDSURF_RULES_FILE = 'kirograph.md';\n\nfunction buildWindsurfHooks(): object {\n  return {\n    hooks: {\n      post_cascade_response: [\n        { command: silentCommand('kirograph sync --quiet'), show_output: false },\n      ],\n    },\n  };\n}\n\nfunction buildWindsurfRule(instructions: string): string {\n  const frontmatter = [\n    '---',\n    'trigger: always_on',\n    '---',\n    '',\n  ].join('\\n');\n  return frontmatter + instructions;\n}\n\nexport function installWindsurfEarly(_projectRoot: string): void {\n  // Write MCP config to user-scoped ~/.codeium/windsurf/mcp_config.json\n  const home = process.env.HOME || process.env.USERPROFILE || '';\n  const mcpPath = path.join(home, '.codeium', 'windsurf', 'mcp_config.json');\n  ensureDir(path.dirname(mcpPath));\n  const existing = readJson(mcpPath);\n  existing.mcpServers = existing.mcpServers ?? {};\n  if (existing.mcpServers[KIROGRAPH_SERVER_NAME]) {\n    console.log(`  \u2713 Windsurf MCP already configured in ${mcpPath}`);\n    return;\n  }\n  existing.mcpServers[KIROGRAPH_SERVER_NAME] = {\n    command: KIROGRAPH_COMMAND,\n    args: KIROGRAPH_MCP_ARGS,\n  };\n  writeJson(mcpPath, existing);\n  console.log(`  \u2713 Windsurf MCP server registered in ${mcpPath}`);\n}\n\nexport function installWindsurfLate(projectRoot: string, opts: LateInstallOptions): void {\n  const instructionOpts = buildInstructionOpts(opts, true);\n\n  const instructionsPath = path.join(projectRoot, '.kirograph', 'windsurf.md');\n  ensureDir(path.dirname(instructionsPath));\n  fs.writeFileSync(instructionsPath, buildAgentInstructions(instructionOpts));\n  console.log(`  \u2713 Windsurf instructions written to ${instructionsPath}`);\n\n  // Write rules file inside .windsurf/rules/ with frontmatter\n  const rulesDir = path.join(projectRoot, '.windsurf', 'rules');\n  ensureDir(rulesDir);\n  const rulePath = path.join(rulesDir, WINDSURF_RULES_FILE);\n  fs.writeFileSync(rulePath, buildWindsurfRule(buildAgentInstructions(instructionOpts)));\n  console.log(`  \u2713 Windsurf rule written to ${rulePath}`);\n\n  // Remove legacy .windsurfrules if it exists and was created by us\n  const legacyPath = path.join(projectRoot, '.windsurfrules');\n  if (fs.existsSync(legacyPath)) {\n    const content = fs.readFileSync(legacyPath, 'utf8');\n    if (content.includes('kirograph')) {\n      fs.unlinkSync(legacyPath);\n      console.log(`  \u2713 Removed legacy .windsurfrules (migrated to .windsurf/rules/)`);\n    }\n  }\n\n  // Write hooks\n  const hooksPath = path.join(projectRoot, '.windsurf', 'hooks.json');\n  const existing = readJson(hooksPath);\n  const kgHooks = buildWindsurfHooks() as any;\n  existing.hooks = existing.hooks ?? {};\n  for (const [event, commands] of Object.entries(kgHooks.hooks)) {\n    existing.hooks[event] = existing.hooks[event] ?? [];\n    for (const cmd of commands as Array<{ command: string; show_output: boolean }>) {\n      if (!existing.hooks[event].some((h: any) => h.command === cmd.command)) {\n        existing.hooks[event].push(cmd);\n      }\n    }\n  }\n  writeJson(hooksPath, existing);\n  console.log(`  \u2713 Windsurf hooks written to ${hooksPath}`);\n}\n\nexport function uninitWindsurf(projectRoot: string): void {\n  // Remove user-scoped MCP config\n  const home = process.env.HOME || process.env.USERPROFILE || '';\n  const mcpPath = path.join(home, '.codeium', 'windsurf', 'mcp_config.json');\n  if (fs.existsSync(mcpPath)) {\n    const config = readJson(mcpPath);\n    if (config.mcpServers?.[KIROGRAPH_SERVER_NAME]) {\n      delete config.mcpServers[KIROGRAPH_SERVER_NAME];\n      if (Object.keys(config.mcpServers).length === 0) delete config.mcpServers;\n      writeJson(mcpPath, config);\n      console.log(`  \u2713 Removed kirograph from ${mcpPath}`);\n    }\n  }\n\n  // Remove rule file\n  const rulePath = path.join(projectRoot, '.windsurf', 'rules', WINDSURF_RULES_FILE);\n  if (fs.existsSync(rulePath)) {\n    fs.unlinkSync(rulePath);\n    console.log(`  \u2713 Removed .windsurf/rules/${WINDSURF_RULES_FILE}`);\n  }\n\n  // Remove legacy .windsurfrules block\n  const legacyPath = path.join(projectRoot, '.windsurfrules');\n  if (fs.existsSync(legacyPath)) {\n    const content = fs.readFileSync(legacyPath, 'utf8');\n    if (content.includes('kirograph')) {\n      fs.unlinkSync(legacyPath);\n      console.log(`  \u2713 Removed legacy .windsurfrules`);\n    }\n  }\n\n  // Remove kirograph hooks\n  const hooksPath = path.join(projectRoot, '.windsurf', 'hooks.json');\n  if (fs.existsSync(hooksPath)) {\n    const config = readJson(hooksPath);\n    if (config.hooks) {\n      let changed = false;\n      for (const event of Object.keys(config.hooks)) {\n        const before = config.hooks[event].length;\n        config.hooks[event] = config.hooks[event].filter((h: any) => !h.command?.includes('kirograph'));\n        if (config.hooks[event].length === 0) delete config.hooks[event];\n        if (config.hooks[event]?.length !== before) changed = true;\n      }\n      if (Object.keys(config.hooks).length === 0) delete config.hooks;\n      if (changed) {\n        writeJson(hooksPath, config);\n        console.log(`  \u2713 Removed kirograph hooks from .windsurf/hooks.json`);\n      }\n    }\n  }\n}\n\nexport function printWindsurfNextSteps(_projectRoot: string): void {\n  const home = process.env.HOME || process.env.USERPROFILE || '';\n  const mcpPath = path.join(home, '.codeium', 'windsurf', 'mcp_config.json');\n  console.log('\\n  Done! Restart Windsurf for the MCP server and hooks to load.');\n  console.log(`  MCP registered in ${mcpPath}`);\n  console.log('  Rule is in .windsurf/rules/kirograph.md');\n  console.log('  Auto-sync hook is in .windsurf/hooks.json\\n');\n}\n"],
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 }

package/dist/bin/kirograph.js

@@ -128,7 +128,7 @@ process.on("uncaughtException", (err) => {
   process.exit(1);
 });
 const program = new import_commander.Command();
-program.name("kirograph").description("Semantic code knowledge graph for Kiro").version("0.28.1").addHelpCommand(true).hook("preAction", (thisCommand) => {
+program.name("kirograph").description("Semantic code knowledge graph for Kiro").version("1.0.0").addHelpCommand(true).hook("preAction", (thisCommand) => {
   const name = thisCommand.name();
   if (name === "init") (0, import_banner.printBanner)();
 });

package/dist/bin/kirograph.js.map

@@ -2,6 +2,6 @@
   "version": 3,
   "sources": ["../../src/bin/kirograph.ts"],
   "sourcesContent": ["#!/usr/bin/env node\n/**\n * KiroGraph CLI\n */\n\nimport { Command } from 'commander';\nimport { printBanner } from './banner';\nimport { printColoredHelp, printInteractiveHelp, register as registerHelp } from './commands/help';\nimport { register as registerInit } from './commands/init';\nimport { register as registerUninit } from './commands/uninit';\nimport { register as registerIndex } from './commands/index';\nimport { register as registerSync } from './commands/sync';\nimport { register as registerStatus } from './commands/status';\nimport { register as registerQuery } from './commands/query';\nimport { register as registerFiles } from './commands/files';\nimport { register as registerContext } from './commands/context';\nimport { register as registerAffected } from './commands/affected';\nimport { register as registerMarkDirty } from './commands/mark-dirty';\nimport { register as registerSyncIfDirty } from './commands/sync-if-dirty';\nimport { register as registerUnlock } from './commands/unlock';\nimport { register as registerInstall } from './commands/install';\nimport { register as registerServe } from './commands/serve';\nimport { register as registerDashboard } from './commands/dashboard';\nimport { register as registerArchitecture } from './commands/architecture';\nimport { register as registerCoupling } from './commands/coupling';\nimport { register as registerPackage } from './commands/package';\nimport { register as registerCaveman } from './commands/caveman';\nimport { register as registerDeadCode } from './commands/dead-code';\nimport { register as registerHotspots } from './commands/hotspots';\nimport { register as registerSurprising } from './commands/surprising';\nimport { register as registerSnapshot } from './commands/snapshot';\nimport { register as registerPath } from './commands/path';\nimport { register as registerExport } from './commands/export';\nimport { register as registerGain } from './commands/gain';\nimport { register as registerCompression } from './commands/compression';\nimport { register as registerExec } from './commands/exec';\nimport { register as registerMemory } from './commands/memory';\nimport { register as registerDocs } from './commands/docs';\nimport { register as registerData } from './commands/data';\nimport { register as registerBenchmark } from './commands/benchmark';\nimport { register as registerFlows } from './commands/flows';\nimport { register as registerCommunities } from './commands/communities';\nimport { register as registerRefactor } from './commands/refactor';\nimport { register as registerRead } from './commands/read';\nimport { register as registerBudget } from './commands/budget';\nimport { register as registerSecurity } from './commands/security';\nimport { register as registerSbom } from './commands/sbom';\nimport { register as registerVex } from './commands/vex';\nimport { register as registerVulns } from './commands/vulns';\nimport { register as registerReachability } from './commands/reachability';\nimport { register as registerStaleness } from './commands/staleness';\nimport { register as registerLicenses } from './commands/licenses';\nimport { register as registerSecurityExport } from './commands/security-export';\nimport { register as registerVulnSuppress } from './commands/vuln-suppress';\nimport { register as registerAttackSurface } from './commands/attack-surface';\nimport { register as registerSecuritySecrets } from './commands/security-secrets';\nimport { register as registerSecurityFlows } from './commands/security-flows';\nimport { register as registerSecurityCiReport } from './commands/security-ci-report';\nimport { register as registerSupplyChain } from './commands/supply-chain';\nimport { register as registerDepConfusion } from './commands/dep-confusion';\nimport { register as registerRemediation } from './commands/remediation';\nimport { register as registerPattern } from './commands/pattern';\nimport { register as registerHook } from './commands/hook';\nimport { register as registerWiki } from './commands/wiki';\nimport { register as registerCallers } from './commands/callers';\nimport { register as registerCallees } from './commands/callees';\nimport { register as registerImpact } from './commands/impact';\nimport { register as registerTypeHierarchy } from './commands/type-hierarchy';\nimport { register as registerCircularDeps } from './commands/circular-deps';\nimport { register as registerDoctor } from './commands/doctor';\nimport { register as registerManifest } from './commands/manifest';\nimport { register as registerUnusedImports } from './commands/unused-imports';\nimport { register as registerGini } from './commands/gini';\nimport { register as registerDependencyDepth } from './commands/dependency-depth';\nimport { register as registerModuleApi } from './commands/module-api';\nimport { register as registerRenamePreview } from './commands/rename-preview';\nimport { register as registerDocCoverage } from './commands/doc-coverage';\nimport { register as registerGodClass } from './commands/god-class';\nimport { register as registerInheritanceDepth } from './commands/inheritance-depth';\nimport { register as registerRecursion } from './commands/recursion';\nimport { register as registerLargest } from './commands/largest';\nimport { register as registerRank } from './commands/rank';\nimport { register as registerDistribution } from './commands/distribution';\nimport { register as registerAnnotations } from './commands/annotations';\nimport { register as registerSession } from './commands/session';\nimport { register as registerStrReplace } from './commands/str-replace';\nimport { register as registerMultiReplace } from './commands/multi-replace';\nimport { register as registerInsertAt } from './commands/insert-at';\nimport { register as registerAstRewrite } from './commands/ast-rewrite';\nimport { register as registerComplexityCli } from './commands/complexity';\nimport { register as registerSimplifyScan } from './commands/simplify-scan';\nimport { register as registerDiffContext } from './commands/diff-context';\nimport { register as registerCommitContext } from './commands/commit-context';\nimport { register as registerPrContext } from './commands/pr-context';\nimport { register as registerChangelog } from './commands/changelog';\nimport { register as registerTestMap } from './commands/test-map';\nimport { register as registerHealth } from './commands/health';\nimport { register as registerDsm } from './commands/dsm';\nimport { register as registerTestRisk } from './commands/test-risk';\nimport { register as registerTestCoverage } from './commands/test-coverage';\nimport { register as registerBench } from './commands/bench';\nimport { register as registerBranch } from './commands/branch';\nimport { register as registerMonitor } from './commands/monitor';\nimport { register as registerUpgrade } from './commands/upgrade';\nimport { register as registerCost } from './commands/cost';\n\n// \u2500\u2500 Global error handler for WASM runtime crashes \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n//\n// node-sqlite3-wasm calls process.abort() when it hits a fatal error (e.g.\n// database is locked by another process). This produces a raw \"Aborted()\"\n// message with no context. We intercept it here to print a clear explanation\n// before the process exits.\nprocess.on('uncaughtException', (err: Error) => {\n  const msg = err?.message ?? String(err);\n  const isWasmAbort = msg.includes('Aborted(') || msg.includes('RuntimeError') || (err as any)?.constructor?.name === 'RuntimeError';\n\n  if (isWasmAbort) {\n    process.stderr.write([\n      '',\n      '  \u2716 KiroGraph crashed: SQLite WASM runtime aborted.',\n      '',\n      '  Most likely cause: another process (e.g. the Kiro MCP server) is',\n      '  holding the database open while indexing is running.',\n      '',\n      '  How to fix:',\n      '    1. Close Kiro IDE (or disable the kirograph MCP server) before indexing',\n      '    2. Run: kirograph unlock',\n      '    3. Then retry: kirograph index',\n      '',\n      '  If the problem persists, delete the lock manually:',\n      '    del .kirograph\\\\kirograph.db.lock  (Windows)',\n      '    rm -rf .kirograph/kirograph.db.lock  (macOS/Linux)',\n      '',\n    ].join('\\n'));\n    process.exit(1);\n  }\n\n  // Not a WASM crash \u2014 re-throw as normal\n  process.stderr.write(`Uncaught error: ${msg}\\n`);\n  process.exit(1);\n});\n\ndeclare const __CLI_VERSION__: string;\n\nconst program = new Command();\n\nprogram\n  .name('kirograph')\n  .description('Semantic code knowledge graph for Kiro')\n  .version(__CLI_VERSION__)\n  .addHelpCommand(true)\n  .hook('preAction', (thisCommand) => {\n    const name = thisCommand.name();\n    if (name === 'init') printBanner();\n  });\n\nregisterInstall(program);\nregisterInit(program);\nregisterUninit(program);\nregisterIndex(program);\nregisterSync(program);\nregisterSyncIfDirty(program);\nregisterMarkDirty(program);\nregisterStatus(program);\nregisterQuery(program);\nregisterContext(program);\nregisterFiles(program);\nregisterAffected(program);\nregisterUnlock(program);\nregisterServe(program);\nregisterDashboard(program);\nregisterArchitecture(program);\nregisterCoupling(program);\nregisterPackage(program);\nregisterCaveman(program);\nregisterDeadCode(program);\nregisterHotspots(program);\nregisterSurprising(program);\nregisterSnapshot(program);\nregisterPath(program);\nregisterExport(program);\nregisterGain(program);\nregisterCompression(program);\nregisterExec(program);\nregisterMemory(program);\nregisterDocs(program);\nregisterData(program);\nregisterBenchmark(program);\nregisterFlows(program);\nregisterCommunities(program);\nregisterRefactor(program);\nregisterRead(program);\nregisterBudget(program);\nconst securityCmd = registerSecurity(program);\nregisterSbom(program);\nregisterVex(program);\nregisterVulns(program);\nregisterReachability(program);\nregisterStaleness(program);\nregisterLicenses(program);\nregisterSecurityExport(securityCmd);\nregisterSecuritySecrets(securityCmd);\nregisterSecurityFlows(securityCmd);\nregisterSecurityCiReport(securityCmd);\nregisterVulnSuppress(program);\nregisterAttackSurface(program);\nregisterSupplyChain(program);\nregisterDepConfusion(program);\nregisterRemediation(program);\nregisterPattern(program);\nregisterHook(program);\nregisterWiki(program);\nregisterCallers(program);\nregisterCallees(program);\nregisterImpact(program);\nregisterTypeHierarchy(program);\nregisterCircularDeps(program);\nregisterDoctor(program);\nregisterManifest(program);\nregisterUnusedImports(program);\nregisterGini(program);\nregisterDependencyDepth(program);\nregisterModuleApi(program);\nregisterRenamePreview(program);\nregisterDocCoverage(program);\nregisterGodClass(program);\nregisterInheritanceDepth(program);\nregisterRecursion(program);\nregisterLargest(program);\nregisterRank(program);\nregisterDistribution(program);\nregisterAnnotations(program);\nregisterSession(program);\nregisterStrReplace(program);\nregisterMultiReplace(program);\nregisterInsertAt(program);\nregisterAstRewrite(program);\nregisterComplexityCli(program);\nregisterSimplifyScan(program);\nregisterDiffContext(program);\nregisterCommitContext(program);\nregisterPrContext(program);\nregisterChangelog(program);\nregisterTestMap(program);\nregisterHealth(program);\nregisterDsm(program);\nregisterTestRisk(program);\nregisterTestCoverage(program);\nregisterBench(program);\nregisterBranch(program);\nregisterMonitor(program);\nregisterUpgrade(program);\nregisterCost(program);\n\n// Register the help command for `kirograph help`\nprogram\n  .command('help')\n  .description('Show interactive help')\n  .action(() => {\n    if (process.stdout.isTTY) {\n      printInteractiveHelp();\n    } else {\n      printBanner();\n      printColoredHelp();\n      process.exit(0);\n    }\n  });\n\nregisterHelp(program);\n\n// Show interactive help when called with no arguments\nif (process.argv.length === 2) {\n  if (process.stdout.isTTY) {\n    printInteractiveHelp();\n  } else {\n    printBanner();\n    printColoredHelp();\n    process.exit(0);\n  }\n} else if (process.argv.includes('--help') || process.argv.includes('-h')) {\n  // Intercept --help before Commander to avoid process.exit\n  if (process.stdout.isTTY) {\n    printInteractiveHelp();\n  } else {\n    printBanner();\n    printColoredHelp();\n    process.exit(0);\n  }\n} else {\n  program.parse(process.argv);\n}\n"],
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   "names": ["registerInstall", "registerInit", "registerUninit", "registerIndex", "registerSync", "registerSyncIfDirty", "registerMarkDirty", "registerStatus", "registerQuery", "registerContext", "registerFiles", "registerAffected", "registerUnlock", "registerServe", "registerDashboard", "registerArchitecture", "registerCoupling", "registerPackage", "registerCaveman", "registerDeadCode", "registerHotspots", "registerSurprising", "registerSnapshot", "registerPath", "registerExport", "registerGain", "registerCompression", "registerExec", "registerMemory", "registerDocs", "registerData", "registerBenchmark", "registerFlows", "registerCommunities", "registerRefactor", "registerRead", "registerBudget", "registerSecurity", "registerSbom", "registerVex", "registerVulns", "registerReachability", "registerStaleness", "registerLicenses", "registerSecurityExport", "registerSecuritySecrets", "registerSecurityFlows", "registerSecurityCiReport", "registerVulnSuppress", "registerAttackSurface", "registerSupplyChain", "registerDepConfusion", "registerRemediation", "registerPattern", "registerHook", "registerWiki", "registerCallers", "registerCallees", "registerImpact", "registerTypeHierarchy", "registerCircularDeps", "registerDoctor", "registerManifest", "registerUnusedImports", "registerGini", "registerDependencyDepth", "registerModuleApi", "registerRenamePreview", "registerDocCoverage", "registerGodClass", "registerInheritanceDepth", "registerRecursion", "registerLargest", "registerRank", "registerDistribution", "registerAnnotations", "registerSession", "registerStrReplace", "registerMultiReplace", "registerInsertAt", "registerAstRewrite", "registerComplexityCli", "registerSimplifyScan", "registerDiffContext", "registerCommitContext", "registerPrContext", "registerChangelog", "registerTestMap", "registerHealth", "registerDsm", "registerTestRisk", "registerTestCoverage", "registerBench", "registerBranch", "registerMonitor", "registerUpgrade", "registerCost", "registerHelp"]
 }

package/dist/config.js

@@ -145,7 +145,27 @@ function createDefaultConfig(_projectRoot) {
     version: 2,
     languages: [],
     include: [],
-    exclude: ["**/node_modules/**", "**/dist/**", "**/build/**", "**/.git/**", "*.min.js", "**/.kirograph/**"],
+    exclude: [
+      "**/node_modules/**",
+      "**/dist/**",
+      "**/build/**",
+      "**/.git/**",
+      "**/.kirograph/**",
+      // Compiled / minified output and build artifacts — not meaningful source to index,
+      // and large bundles can crash the parser (issue #33). '*.min.js' was previously
+      // non-recursive (root-only); use '**/' so nested bundles are matched.
+      "**/*.min.js",
+      "**/*.min.css",
+      "**/*.bundle.js",
+      "**/*.map",
+      "**/out/**",
+      "**/.next/**",
+      "**/.nuxt/**",
+      "**/.vite/**",
+      "**/.svelte-kit/**",
+      "**/public/build/**",
+      "**/Resources/Public/**"
+    ],
     maxFileSize: 1048576,
     extractDocstrings: false,
     trackCallSites: false,

package/dist/config.js.map

@@ -1,7 +1,7 @@
 {
   "version": 3,
   "sources": ["../src/config.ts"],
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Kept for backwards compatibility. */\n  useVecIndex: boolean;\n  semanticEngine: 'cosine' | 'turboquant' | 'turbovec' | 'sqlite-vec' | 'orama' | 'pglite' | 'lancedb' | 'qdrant' | 'typesense';\n  /** Apply TurboQuant ANN index to memory observations and doc sections. Default: false. */\n  turboquantMemDocs: boolean;\n  /** TurboQuant bits per coordinate (1\u20138). Controls compression/quality tradeoff. Default: 3 (\u224825\u00D7). */\n  turboquantBits: number;\n  /** Apply TurboVec ANN index to memory observations and doc sections. Default: false. */\n  turbovecMemDocs: boolean;\n  /** TurboVec bits per coordinate (2, 3, or 4). Controls compression/quality tradeoff. Default: 4. */\n  turbovecBits: number;\n  typesenseDashboard: boolean;\n  qdrantDashboard: boolean;\n  minLogLevel: 'debug' | 'info' | 'warn' | 'error';\n  frameworkHints: string[];\n  fuzzyResolutionThreshold: number; // 0.0\u20131.0\n  /** Enable architecture analysis (package graph + layer detection). Default: false. */\n  enableArchitecture: boolean;\n  /**\n   * User-defined layer \u2192 glob pattern overrides.\n   * When set, config-defined layers win over auto-detected ones.\n   * Example: { \"api\": [\"src/routes/**\", \"src/controllers/**\"] }\n   */\n  architectureLayers?: Record<string, string[]>;\n  /** Agent communication style injected at agentSpawn. Default: 'off'. */\n  cavemanMode: 'off' | 'lite' | 'full' | 'ultra';\n  /** Shell compression level for kirograph_exec. 'off' disables the hook/steering. Default: 'normal'. */\n  shellCompressionLevel: 'off' | 'normal' | 'aggressive' | 'ultra';\n  /**\n   * Number of pending (unindexed) files above which kirograph_status warns the agent.\n   * Set to 0 to disable the warning. Default: 10.\n   */\n  syncWarningThreshold: number;\n  /** Enable persistent cross-session memory. Default: false. */\n  enableMemory: boolean;\n  /** FTS/vector blend for memory search: 0 = FTS only, 1 = vector only. Default: 0.5. */\n  memorySearchAlpha: number;\n  /** Store uncompressed originals when caveman is on. Default: false. */\n  memoryKeepRaw: boolean;\n  /** Auto-prune threshold (max observations). 0 = no limit. Default: 10000. */\n  memoryMaxObservations: number;\n  /** Seconds of inactivity before auto-closing a session. Default: 7200. */\n  memorySessionTimeout: number;\n  /** Max observations shown in kirograph_context. Default: 3. */\n  memoryContextLimit: number;\n  /** Min relevance score to include memory in context. Default: 0.3. */\n  memoryContextThreshold: number;\n  /** Glob patterns for paths to never capture in memory. Default: []. */\n  memoryExcludePatterns: string[];\n  /** Enable watchmen \u2014 auto-synthesize workspace briefs from memory observations. Requires enableMemory. Default: false. */\n  enableWatchmen: boolean;\n  /** Minimum new observations since last synthesis before watchmenReady fires. Default: 5. */\n  watchmenThreshold: number;\n  /**\n   * How synthesis is performed.\n   * 'local' \u2014 runs a local HuggingFace model via @huggingface/transformers (no API cost, works for all tools).\n   * 'agent' \u2014 delegates to the active AI agent via askAgent hook (Kiro only, consumes agent tokens).\n   * Default: 'local'.\n   */\n  watchmenSynthesisMode: 'local' | 'agent';\n  /** HuggingFace model ID for local synthesis. Only used when watchmenSynthesisMode is 'local'. Default: 'onnx-community/gemma-4-E4B-it-ONNX'. */\n  watchmenLocalModel: string;\n  /** Enable documentation indexing and navigation. Default: false. */\n  enableDocs: boolean;\n  /** Glob patterns for documentation files to include. */\n  docsInclude: string[];\n  /** Glob patterns for documentation files to exclude. */\n  docsExclude: string[];\n  /** Enable auto-linking of doc sections to code symbols. 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Default: false. */\n  wikiAutoResolveConflicts: boolean;\n  /** Lint frequency: 'weekly' (every ~20 sessions) or 'off'. Default: 'off'. */\n  wikiLintFrequency: 'weekly' | 'off';\n  /** Max wiki pages to include in kirograph_context. Default: 3. */\n  wikiContextLimit: number;\n  /** Min FTS score to include wiki page in context. Default: 0.4. */\n  wikiContextThreshold: number;\n  /** Enable tabular data indexing and querying. Default: false. */\n  enableData: boolean;\n  /** Glob patterns for data files to include. */\n  dataInclude: string[];\n  /** Glob patterns for data files to exclude. */\n  dataExclude: string[];\n  /** Enable auto-linking of data files to code symbols. Default: true. */\n  dataLinkCode: boolean;\n  /** Max datasets to include in kirograph_context. 0 = disabled. Default: 0. */\n  dataContextLimit: number;\n  /** Max file size for data files (bytes). Default: 50MB. */\n  dataMaxFileSize: number;\n  /** Max rows to index per file. Default: 1,000,000. */\n  dataMaxRows: number;\n  /** Max rows returned per query. Default: 500. */\n  dataQueryLimit: number;\n  /** Max token budget per response. Default: 8000. */\n  dataMaxResponseTokens: number;\n  /** Enable security analysis (dependency scanning + vulnerability detection). Default: false. */\n  enableSecurity: boolean;\n  /** Vulnerability databases to query. Default: ['OSV']. */\n  securityDatabases: string[];\n  /** Enable AST-level structural pattern matching (SAST) during indexing. Default: false. */\n  enablePatterns: boolean;\n  /** Enable code health tools (hotspots, dead code, path analysis, type hierarchy). Default: false. */\n  enableCodeHealth: boolean;\n  /** Enable navigation tools (status, files, impact). Default: false. */\n  enableNavigation: boolean;\n  /** Enable complexity metrics tools. Default: false. */\n  enableComplexity: boolean;\n  /** Enable git-context tools (diff_context, commit_context, flows, etc.). 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Merged with bundled library (user rules win on id conflict). Default: undefined. */\n  patternLibraryPath: string | undefined;\n  /** Minimum severity level for storing pattern matches during index-time analysis. Default: 'low'. */\n  patternSeverityThreshold: 'critical' | 'high' | 'medium' | 'low';\n  /** Auto-run vulnerability enrichment after manifest parsing. Default: true. */\n  securityAutoEnrich: boolean;\n  /** Max age in days for vulnerability data before showing a staleness warning. Default: 7. */\n  securityEnrichMaxAgeDays: number;\n  /**\n   * License policy for dependency compliance.\n   * deny: licenses to block (build fails / command exits non-zero).\n   * warn: licenses to flag as warnings.\n   * Patterns support wildcards: GPL-* matches GPL-2.0, GPL-3.0, etc.\n   * Default: { deny: [], warn: [] }.\n   */\n  securityLicensePolicy: {\n    deny: string[];\n    warn: string[];\n  };\n  /** Context budget governance settings. */\n  contextBudget?: {\n    maxTokensPerSession: number;\n    warnAt: number;\n    throttleAt: number;\n  };\n}\n\n// \u2500\u2500 Constants \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nconst KIROGRAPH_DIR = '.kirograph';\nconst CONFIG_FILE = 'config.json';\n\nconst KNOWN_FIELDS = new Set<string>([\n  'version', 'languages', 'include', 'exclude', 'maxFileSize',\n  'extractDocstrings', 'trackCallSites', 'enableEmbeddings', 'embeddingModel', 'embeddingDim',\n  'useVecIndex', 'semanticEngine', 'turboquantMemDocs', 'turboquantBits', 'turbovecMemDocs', 'turbovecBits', 'typesenseDashboard', 'qdrantDashboard',\n  'minLogLevel', 'frameworkHints', 'fuzzyResolutionThreshold',\n  'enableArchitecture', 'architectureLayers', 'cavemanMode', 'shellCompressionLevel', 'syncWarningThreshold',\n  'enableMemory', 'memorySearchAlpha', 'memoryKeepRaw', 'memoryMaxObservations',\n  'memorySessionTimeout', 'memoryContextLimit', 'memoryContextThreshold', 'memoryExcludePatterns',\n  'enableWatchmen', 'watchmenThreshold', 'watchmenSynthesisMode', 'watchmenLocalModel',\n  'enableWiki', 'wikiSynthesisMode', 'wikiLocalModel', 'wikiSources',\n  'wikiAutoResolveConflicts', 'wikiLintFrequency', 'wikiContextLimit', 'wikiContextThreshold',\n  'enableDocs', 'docsInclude', 'docsExclude', 'docsLinkCode',\n  'docsContextLimit', 'docsContextThreshold', 'docsMaxFileSize', 'docsSummarization',\n  'enableData', 'dataInclude', 'dataExclude', 'dataLinkCode',\n  'dataContextLimit', 'dataMaxFileSize', 'dataMaxRows', 'dataQueryLimit', 'dataMaxResponseTokens',\n  'enableSecurity', 'securityDatabases', 'securityAutoEnrich', 'securityEnrichMaxAgeDays', 'securityLicensePolicy',\n  'enablePatterns', 'patternLibraryPath', 'patternSeverityThreshold',\n  'enableCodeHealth', 'enableNavigation', 'enableComplexity', 'enableGitContext',\n  'enableEditPrimitives', 'enableBranch',\n  'enableAgentUtils', 'enableGeneralCompression',\n  'contextBudget',\n  // Legacy aliases / derived fields (accepted but ignored or recomputed)\n  'enableCompression', 'compressionLevel', 'enableShellExec',\n  // Deprecated: dissolved flag kept here so old configs don't warn\n  'enableAdvancedAnalysis',\n]);\n\nconst LOG_LEVELS = new Set(['debug', 'info', 'warn', 'error']);\n\n// \u2500\u2500 ReDoS-safe regex check \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\n/**\n * Returns false if the pattern is potentially dangerous (ReDoS risk) or too long.\n * Checks for catastrophic backtracking patterns like (a+)+ or (a|a)+.\n */\nexport function isSafeRegex(pattern: string): boolean {\n  if (pattern.length > 100) return false;\n  // Detect nested quantifiers: (x+)+ or (x*)+ or (x+)* etc.\n  if (/\\([^)]*[+*][^)]*\\)[+*?]/.test(pattern)) return false;\n  // Detect alternation with overlap: (a|a)+ style\n  if (/\\([^)]*\\|[^)]*\\)[+*]/.test(pattern)) return false;\n  return true;\n}\n\n// \u2500\u2500 Default config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport function createDefaultConfig(_projectRoot?: string): KiroGraphConfig {\n  return {\n    version: 2,\n    languages: [],\n    include: [],\n    exclude: ['**/node_modules/**', '**/dist/**', '**/build/**', '**/.git/**', '*.min.js', '**/.kirograph/**'],\n    maxFileSize: 1_048_576,\n    extractDocstrings: false,\n    trackCallSites: false,\n    enableEmbeddings: false,\n    embeddingModel: 'nomic-ai/nomic-embed-text-v1.5',\n    embeddingDim: 768,\n    useVecIndex: false,\n    semanticEngine: 'cosine',\n    turboquantMemDocs: false,\n    turboquantBits: 3,\n    turbovecMemDocs: false,\n    turbovecBits: 4,\n    typesenseDashboard: false,\n    qdrantDashboard: false,\n    minLogLevel: 'warn',\n    frameworkHints: [],\n    fuzzyResolutionThreshold: 0.5,\n    enableArchitecture: false,\n    cavemanMode: 'off',\n    shellCompressionLevel: 'off',\n    syncWarningThreshold: 10,\n    enableMemory: false,\n    memorySearchAlpha: 0.5,\n    memoryKeepRaw: false,\n    memoryMaxObservations: 10000,\n    memorySessionTimeout: 7200,\n    memoryContextLimit: 3,\n    memoryContextThreshold: 0.3,\n    memoryExcludePatterns: [],\n    enableWatchmen: false,\n    watchmenThreshold: 5,\n    watchmenSynthesisMode: 'local',\n    watchmenLocalModel: 'onnx-community/gemma-4-E4B-it-ONNX',\n    enableWiki: false,\n    wikiSynthesisMode: 'agent' as const,\n    wikiLocalModel: 'onnx-community/gemma-4-E4B-it-ONNX',\n    wikiSources: ['docs/'],\n    wikiAutoResolveConflicts: false,\n    wikiLintFrequency: 'off' as const,\n    wikiContextLimit: 3,\n    wikiContextThreshold: 0.4,\n    enableDocs: false,\n    docsInclude: ['**/*.md', '**/*.mdx', '**/*.rst', '**/*.adoc', '**/*.asciidoc', '**/*.rdoc', '**/*.org', '**/*.cheatmd', 'docs/**/*.txt', 'docs/**/*.html'],\n    docsExclude: ['node_modules/**', '**/CHANGELOG*', '**/LICENSE*', '**/CHANGES*', 'dist/**', 'build/**', 'coverage/**', '.git/**', '**/generated/**', '**/auto-generated/**', '**/vendor/**', '_build/**'],\n    docsLinkCode: true,\n    docsContextLimit: 0,\n    docsContextThreshold: 0.3,\n    docsMaxFileSize: 1_048_576,\n    docsSummarization: 'first-sentence',\n    enableData: false,\n    dataInclude: ['**/*.csv', '**/*.tsv', '**/*.jsonl', '**/*.ndjson', '**/*.xlsx', '**/*.xls', '**/*.parquet', 'data/**/*.json', '**/*.pdf'],\n    dataExclude: ['node_modules/**', 'dist/**', 'build/**', '.git/**', '**/package-lock.json', '**/yarn.lock', '**/pnpm-lock.yaml', '**/tsconfig.json', '**/jsconfig.json', 'coverage/**', '**/generated/**'],\n    dataLinkCode: true,\n    dataContextLimit: 0,\n    dataMaxFileSize: 52_428_800,\n    dataMaxRows: 1_000_000,\n    dataQueryLimit: 500,\n    dataMaxResponseTokens: 8000,\n    enableSecurity: false,\n    securityDatabases: ['OSV'],\n    securityAutoEnrich: true,\n    securityEnrichMaxAgeDays: 7,\n    securityLicensePolicy: { deny: [], warn: [] },\n    enablePatterns: false,\n    patternLibraryPath: undefined,\n    patternSeverityThreshold: 'low',\n    enableCodeHealth: false,\n    enableNavigation: false,\n    enableComplexity: false,\n    enableGitContext: false,\n    enableEditPrimitives: false,\n    enableBranch: false,\n    enableAgentUtils: true,\n    enableGeneralCompression: false,\n    enableShellExec: false,\n  };\n}\n\n// \u2500\u2500 Validation \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport function validateConfig(config: unknown): KiroGraphConfig {\n  const defaults = createDefaultConfig();\n\n  if (typeof config !== 'object' || config === null) {\n    return defaults;\n  }\n\n  const raw = config as Record<string, unknown>;\n\n  // Warn about unknown fields\n  for (const key of Object.keys(raw)) {\n    if (!KNOWN_FIELDS.has(key)) {\n      logWarn(`Unknown config field: ${key}`);\n    }\n  }\n\n  // Validate and coerce each field\n  const version = typeof raw.version === 'number' ? raw.version : defaults.version;\n  const languages = Array.isArray(raw.languages) && raw.languages.every(l => typeof l === 'string')\n    ? (raw.languages as string[])\n    : defaults.languages;\n  const maxFileSize = typeof raw.maxFileSize === 'number' && raw.maxFileSize > 0\n    ? raw.maxFileSize\n    : defaults.maxFileSize;\n  const extractDocstrings = typeof raw.extractDocstrings === 'boolean'\n    ? raw.extractDocstrings\n    : defaults.extractDocstrings;\n  const trackCallSites = typeof raw.trackCallSites === 'boolean'\n    ? raw.trackCallSites\n    : defaults.trackCallSites;\n  const enableEmbeddings = typeof raw.enableEmbeddings === 'boolean'\n    ? raw.enableEmbeddings\n    : defaults.enableEmbeddings;\n  const embeddingModel = typeof raw.embeddingModel === 'string' && raw.embeddingModel.length > 0\n    ? raw.embeddingModel\n    : defaults.embeddingModel;\n  const embeddingDim = typeof raw.embeddingDim === 'number' && raw.embeddingDim > 0\n    ? raw.embeddingDim\n    : defaults.embeddingDim;\n  const useVecIndex = typeof raw.useVecIndex === 'boolean'\n    ? raw.useVecIndex\n    : defaults.useVecIndex;\n  const SEMANTIC_ENGINES = new Set(['cosine', 'turboquant', 'turbovec', 'sqlite-vec', 'orama', 'pglite', 'lancedb', 'qdrant', 'typesense']);\n  // useVecIndex is a legacy alias: if set and no explicit semanticEngine, map it\n  const semanticEngine = typeof raw.semanticEngine === 'string' && SEMANTIC_ENGINES.has(raw.semanticEngine)\n    ? (raw.semanticEngine as KiroGraphConfig['semanticEngine'])\n    : useVecIndex ? 'sqlite-vec' : defaults.semanticEngine;\n  const turboquantMemDocs = typeof raw.turboquantMemDocs === 'boolean'\n    ? raw.turboquantMemDocs\n    : defaults.turboquantMemDocs;\n  const turboquantBits = typeof raw.turboquantBits === 'number'\n    && raw.turboquantBits >= 1 && raw.turboquantBits <= 8\n    ? Math.round(raw.turboquantBits)\n    : defaults.turboquantBits;\n  const turbovecMemDocs = typeof raw.turbovecMemDocs === 'boolean'\n    ? raw.turbovecMemDocs\n    : defaults.turbovecMemDocs;\n  const TURBOVEC_BIT_WIDTHS = new Set([2, 3, 4]);\n  const turbovecBits = typeof raw.turbovecBits === 'number' && TURBOVEC_BIT_WIDTHS.has(Math.round(raw.turbovecBits))\n    ? Math.round(raw.turbovecBits)\n    : defaults.turbovecBits;\n  const typesenseDashboard = typeof raw.typesenseDashboard === 'boolean'\n    ? raw.typesenseDashboard\n    : defaults.typesenseDashboard;\n  const qdrantDashboard = typeof raw.qdrantDashboard === 'boolean'\n    ? raw.qdrantDashboard\n    : defaults.qdrantDashboard;\n  const minLogLevel = typeof raw.minLogLevel === 'string' && LOG_LEVELS.has(raw.minLogLevel)\n    ? (raw.minLogLevel as KiroGraphConfig['minLogLevel'])\n    : defaults.minLogLevel;\n  const frameworkHints = Array.isArray(raw.frameworkHints) && raw.frameworkHints.every(h => typeof h === 'string')\n    ? (raw.frameworkHints as string[])\n    : defaults.frameworkHints;\n  const fuzzyResolutionThreshold = typeof raw.fuzzyResolutionThreshold === 'number'\n    && raw.fuzzyResolutionThreshold >= 0\n    && raw.fuzzyResolutionThreshold <= 1\n    ? raw.fuzzyResolutionThreshold\n    : defaults.fuzzyResolutionThreshold;\n  const enableArchitecture = typeof raw.enableArchitecture === 'boolean'\n    ? raw.enableArchitecture\n    : defaults.enableArchitecture;\n  const architectureLayers = _validateArchitectureLayers(raw.architectureLayers);\n  const CAVEMAN_MODES = new Set(['off', 'lite', 'full', 'ultra']);\n  const cavemanMode = typeof raw.cavemanMode === 'string' && CAVEMAN_MODES.has(raw.cavemanMode)\n    ? (raw.cavemanMode as KiroGraphConfig['cavemanMode'])\n    : defaults.cavemanMode;\n  const COMPRESSION_LEVELS = new Set(['off', 'normal', 'aggressive', 'ultra']);\n  // Support legacy field names: enableCompression (boolean) and compressionLevel (string)\n  let shellCompressionLevel: KiroGraphConfig['shellCompressionLevel'];\n  if (typeof raw.shellCompressionLevel === 'string' && COMPRESSION_LEVELS.has(raw.shellCompressionLevel)) {\n    shellCompressionLevel = raw.shellCompressionLevel as KiroGraphConfig['shellCompressionLevel'];\n  } else if (typeof raw.compressionLevel === 'string' && COMPRESSION_LEVELS.has(raw.compressionLevel)) {\n    shellCompressionLevel = raw.compressionLevel as KiroGraphConfig['shellCompressionLevel'];\n  } else if (typeof raw.enableCompression === 'boolean') {\n    shellCompressionLevel = raw.enableCompression ? 'normal' : 'off';\n  } else {\n    shellCompressionLevel = defaults.shellCompressionLevel;\n  }\n  const syncWarningThreshold = typeof raw.syncWarningThreshold === 'number' && raw.syncWarningThreshold >= 0\n    ? Math.round(raw.syncWarningThreshold)\n    : defaults.syncWarningThreshold;\n\n  // \u2500\u2500 Memory config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableMemory = typeof raw.enableMemory === 'boolean'\n    ? raw.enableMemory\n    : defaults.enableMemory;\n  const memorySearchAlpha = typeof raw.memorySearchAlpha === 'number'\n    && raw.memorySearchAlpha >= 0 && raw.memorySearchAlpha <= 1\n    ? raw.memorySearchAlpha\n    : defaults.memorySearchAlpha;\n  const memoryKeepRaw = typeof raw.memoryKeepRaw === 'boolean'\n    ? raw.memoryKeepRaw\n    : defaults.memoryKeepRaw;\n  const memoryMaxObservations = typeof raw.memoryMaxObservations === 'number' && raw.memoryMaxObservations >= 0\n    ? Math.round(raw.memoryMaxObservations)\n    : defaults.memoryMaxObservations;\n  const memorySessionTimeout = typeof raw.memorySessionTimeout === 'number' && raw.memorySessionTimeout > 0\n    ? Math.round(raw.memorySessionTimeout)\n    : defaults.memorySessionTimeout;\n  const memoryContextLimit = typeof raw.memoryContextLimit === 'number' && raw.memoryContextLimit >= 0\n    ? Math.round(raw.memoryContextLimit)\n    : defaults.memoryContextLimit;\n  const memoryContextThreshold = typeof raw.memoryContextThreshold === 'number'\n    && raw.memoryContextThreshold >= 0 && raw.memoryContextThreshold <= 1\n    ? raw.memoryContextThreshold\n    : defaults.memoryContextThreshold;\n  const memoryExcludePatterns = Array.isArray(raw.memoryExcludePatterns)\n    && raw.memoryExcludePatterns.every((p: unknown) => typeof p === 'string')\n    ? (raw.memoryExcludePatterns as string[])\n    : defaults.memoryExcludePatterns;\n\n  // \u2500\u2500 Watchmen config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableWatchmen = typeof raw.enableWatchmen === 'boolean'\n    ? raw.enableWatchmen\n    : defaults.enableWatchmen;\n  const watchmenThreshold = typeof raw.watchmenThreshold === 'number' && raw.watchmenThreshold > 0\n    ? Math.round(raw.watchmenThreshold)\n    : defaults.watchmenThreshold;\n  const WATCHMEN_SYNTHESIS_MODES = new Set(['local', 'agent']);\n  const watchmenSynthesisMode = typeof raw.watchmenSynthesisMode === 'string' && WATCHMEN_SYNTHESIS_MODES.has(raw.watchmenSynthesisMode)\n    ? (raw.watchmenSynthesisMode as KiroGraphConfig['watchmenSynthesisMode'])\n    : defaults.watchmenSynthesisMode;\n  const watchmenLocalModel = typeof raw.watchmenLocalModel === 'string' && raw.watchmenLocalModel.length > 0\n    ? raw.watchmenLocalModel\n    : defaults.watchmenLocalModel;\n\n  // \u2500\u2500 Wiki config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableWiki = typeof raw.enableWiki === 'boolean' ? raw.enableWiki : defaults.enableWiki;\n  const wikiSynthesisMode = raw.wikiSynthesisMode === 'local' ? 'local' as const : 'agent' as const;\n  const wikiLocalModel = typeof raw.wikiLocalModel === 'string' ? raw.wikiLocalModel : defaults.wikiLocalModel;\n  const wikiSources = Array.isArray(raw.wikiSources) ? raw.wikiSources : defaults.wikiSources;\n  const wikiAutoResolveConflicts = typeof raw.wikiAutoResolveConflicts === 'boolean' ? raw.wikiAutoResolveConflicts : defaults.wikiAutoResolveConflicts;\n  const wikiLintFrequency = raw.wikiLintFrequency === 'weekly' ? 'weekly' as const : 'off' as const;\n  const wikiContextLimit = typeof raw.wikiContextLimit === 'number' ? raw.wikiContextLimit : defaults.wikiContextLimit;\n  const wikiContextThreshold = typeof raw.wikiContextThreshold === 'number' ? raw.wikiContextThreshold : defaults.wikiContextThreshold;\n\n  // \u2500\u2500 Docs config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableDocs = typeof raw.enableDocs === 'boolean'\n    ? raw.enableDocs\n    : defaults.enableDocs;\n  const docsInclude = Array.isArray(raw.docsInclude)\n    && raw.docsInclude.every((p: unknown) => typeof p === 'string')\n    ? (raw.docsInclude as string[])\n    : defaults.docsInclude;\n  const docsExclude = Array.isArray(raw.docsExclude)\n    && raw.docsExclude.every((p: unknown) => typeof p === 'string')\n    ? (raw.docsExclude as string[])\n    : defaults.docsExclude;\n  const docsLinkCode = typeof raw.docsLinkCode === 'boolean'\n    ? raw.docsLinkCode\n    : defaults.docsLinkCode;\n  const docsContextLimit = typeof raw.docsContextLimit === 'number' && raw.docsContextLimit >= 0\n    ? Math.round(raw.docsContextLimit)\n    : defaults.docsContextLimit;\n  const docsContextThreshold = typeof raw.docsContextThreshold === 'number'\n    && raw.docsContextThreshold >= 0 && raw.docsContextThreshold <= 1\n    ? raw.docsContextThreshold\n    : defaults.docsContextThreshold;\n  const docsMaxFileSize = typeof raw.docsMaxFileSize === 'number' && raw.docsMaxFileSize > 0\n    ? raw.docsMaxFileSize\n    : defaults.docsMaxFileSize;\n  const DOCS_SUMMARIZATION_MODES = new Set(['embedding', 'first-sentence', 'off']);\n  const docsSummarization = typeof raw.docsSummarization === 'string' && DOCS_SUMMARIZATION_MODES.has(raw.docsSummarization)\n    ? (raw.docsSummarization as KiroGraphConfig['docsSummarization'])\n    : defaults.docsSummarization;\n\n  // \u2500\u2500 Data config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableData = typeof raw.enableData === 'boolean' ? raw.enableData : defaults.enableData;\n  const dataInclude = Array.isArray(raw.dataInclude) && raw.dataInclude.every((p: unknown) => typeof p === 'string')\n    ? (raw.dataInclude as string[]) : defaults.dataInclude;\n  const dataExclude = Array.isArray(raw.dataExclude) && raw.dataExclude.every((p: unknown) => typeof p === 'string')\n    ? (raw.dataExclude as string[]) : defaults.dataExclude;\n  const dataLinkCode = typeof raw.dataLinkCode === 'boolean' ? raw.dataLinkCode : defaults.dataLinkCode;\n  const dataContextLimit = typeof raw.dataContextLimit === 'number' && raw.dataContextLimit >= 0\n    ? Math.round(raw.dataContextLimit) : defaults.dataContextLimit;\n  const dataMaxFileSize = typeof raw.dataMaxFileSize === 'number' && raw.dataMaxFileSize > 0\n    ? raw.dataMaxFileSize : defaults.dataMaxFileSize;\n  const dataMaxRows = typeof raw.dataMaxRows === 'number' && raw.dataMaxRows > 0\n    ? Math.round(raw.dataMaxRows) : defaults.dataMaxRows;\n  const dataQueryLimit = typeof raw.dataQueryLimit === 'number' && raw.dataQueryLimit > 0\n    ? Math.min(Math.round(raw.dataQueryLimit), 500) : defaults.dataQueryLimit;\n  const dataMaxResponseTokens = typeof raw.dataMaxResponseTokens === 'number' && raw.dataMaxResponseTokens > 0\n    ? Math.round(raw.dataMaxResponseTokens) : defaults.dataMaxResponseTokens;\n\n  // \u2500\u2500 Security config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  let enableSecurity: boolean;\n  if (typeof raw.enableSecurity === 'boolean') {\n    enableSecurity = raw.enableSecurity;\n  } else {\n    if (raw.enableSecurity !== undefined) {\n      logWarn('Invalid config field enableSecurity: expected boolean, applying default (false)');\n    }\n    enableSecurity = defaults.enableSecurity;\n  }\n\n  let securityAutoEnrich: boolean;\n  if (typeof raw.securityAutoEnrich === 'boolean') {\n    securityAutoEnrich = raw.securityAutoEnrich;\n  } else {\n    if (raw.securityAutoEnrich !== undefined) {\n      logWarn('Invalid config field securityAutoEnrich: expected boolean, applying default (true)');\n    }\n    securityAutoEnrich = defaults.securityAutoEnrich;\n  }\n\n  let securityEnrichMaxAgeDays: number;\n  if (typeof raw.securityEnrichMaxAgeDays === 'number' && raw.securityEnrichMaxAgeDays > 0) {\n    securityEnrichMaxAgeDays = raw.securityEnrichMaxAgeDays;\n  } else {\n    if (raw.securityEnrichMaxAgeDays !== undefined) {\n      logWarn('Invalid config field securityEnrichMaxAgeDays: expected positive number, applying default (7)');\n    }\n    securityEnrichMaxAgeDays = defaults.securityEnrichMaxAgeDays;\n  }\n\n  const SUPPORTED_SECURITY_DATABASES = new Set(['OSV']);\n  let securityDatabases: string[];\n  if (Array.isArray(raw.securityDatabases) && raw.securityDatabases.every((d: unknown) => typeof d === 'string')) {\n    const valid = (raw.securityDatabases as string[]).filter(d => {\n      if (!SUPPORTED_SECURITY_DATABASES.has(d)) {\n        logWarn(`Unsupported security database \"${d}\" in securityDatabases, ignoring`);\n        return false;\n      }\n      return true;\n    });\n    securityDatabases = valid.length > 0 ? valid : defaults.securityDatabases;\n  } else {\n    if (raw.securityDatabases !== undefined) {\n      logWarn('Invalid config field securityDatabases: expected array of strings, applying default ([\"OSV\"])');\n    }\n    securityDatabases = defaults.securityDatabases;\n  }\n\n  let securityLicensePolicy: KiroGraphConfig['securityLicensePolicy'];\n  if (raw.securityLicensePolicy && typeof raw.securityLicensePolicy === 'object' && !Array.isArray(raw.securityLicensePolicy)) {\n    const rawPolicy = raw.securityLicensePolicy as Record<string, unknown>;\n    const deny = Array.isArray(rawPolicy.deny) && rawPolicy.deny.every((p: unknown) => typeof p === 'string')\n      ? (rawPolicy.deny as string[])\n      : defaults.securityLicensePolicy.deny;\n    const warn = Array.isArray(rawPolicy.warn) && rawPolicy.warn.every((p: unknown) => typeof p === 'string')\n      ? (rawPolicy.warn as string[])\n      : defaults.securityLicensePolicy.warn;\n    securityLicensePolicy = { deny, warn };\n  } else {\n    if (raw.securityLicensePolicy !== undefined) {\n      logWarn('Invalid config field securityLicensePolicy: expected object with deny/warn arrays, applying default');\n    }\n    securityLicensePolicy = defaults.securityLicensePolicy;\n  }\n\n  // \u2500\u2500 Patterns config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  let enablePatterns: boolean;\n  if (typeof raw.enablePatterns === 'boolean') {\n    enablePatterns = raw.enablePatterns;\n  } else {\n    if (raw.enablePatterns !== undefined) {\n      logWarn('Invalid config field enablePatterns: expected boolean, applying default (false)');\n    }\n    enablePatterns = defaults.enablePatterns;\n  }\n\n  let patternLibraryPath: string | undefined;\n  if (raw.patternLibraryPath === undefined || raw.patternLibraryPath === null) {\n    patternLibraryPath = undefined;\n  } else if (typeof raw.patternLibraryPath === 'string') {\n    patternLibraryPath = raw.patternLibraryPath;\n  } else {\n    logWarn('Invalid config field patternLibraryPath: expected string or undefined, applying default (undefined)');\n    patternLibraryPath = defaults.patternLibraryPath;\n  }\n\n  const PATTERN_SEVERITY_LEVELS = new Set(['critical', 'high', 'medium', 'low']);\n  let patternSeverityThreshold: KiroGraphConfig['patternSeverityThreshold'];\n  if (typeof raw.patternSeverityThreshold === 'string' && PATTERN_SEVERITY_LEVELS.has(raw.patternSeverityThreshold)) {\n    patternSeverityThreshold = raw.patternSeverityThreshold as KiroGraphConfig['patternSeverityThreshold'];\n  } else {\n    if (raw.patternSeverityThreshold !== undefined) {\n      logWarn('Invalid config field patternSeverityThreshold: expected critical|high|medium|low, applying default (low)');\n    }\n    patternSeverityThreshold = defaults.patternSeverityThreshold;\n  }\n\n  // \u2500\u2500 Tool group flags \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableCodeHealth = typeof raw.enableCodeHealth === 'boolean'\n    ? raw.enableCodeHealth\n    : defaults.enableCodeHealth;\n  const enableNavigation = typeof raw.enableNavigation === 'boolean'\n    ? raw.enableNavigation\n    : defaults.enableNavigation;\n  const enableComplexity = typeof raw.enableComplexity === 'boolean'\n    ? raw.enableComplexity\n    : defaults.enableComplexity;\n  const enableGitContext = typeof raw.enableGitContext === 'boolean'\n    ? raw.enableGitContext\n    : defaults.enableGitContext;\n  const enableEditPrimitives = typeof raw.enableEditPrimitives === 'boolean'\n    ? raw.enableEditPrimitives\n    : defaults.enableEditPrimitives;\n  const enableBranch = typeof raw.enableBranch === 'boolean'\n    ? raw.enableBranch\n    : defaults.enableBranch;\n  // enableAdvancedAnalysis is deprecated \u2014 silently accepted, not applied\n  const enableAgentUtils = typeof raw.enableAgentUtils === 'boolean'\n    ? raw.enableAgentUtils\n    : defaults.enableAgentUtils;\n  const enableGeneralCompression = typeof raw.enableGeneralCompression === 'boolean'\n    ? raw.enableGeneralCompression\n    : defaults.enableGeneralCompression;\n\n  // Dependency constraint: enableSecurity requires enableArchitecture\n  let finalEnableArchitecture = enableArchitecture;\n  if (enableSecurity && !enableArchitecture) {\n    logWarn('enableSecurity requires enableArchitecture \\u2014 auto-enabling architecture analysis');\n    finalEnableArchitecture = true;\n  }\n\n  // \u2500\u2500 Context budget config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  let contextBudget: KiroGraphConfig['contextBudget'] | undefined;\n  if (raw.contextBudget && typeof raw.contextBudget === 'object' && !Array.isArray(raw.contextBudget)) {\n    const cb = raw.contextBudget as Record<string, unknown>;\n    contextBudget = {\n      maxTokensPerSession: typeof cb.maxTokensPerSession === 'number' && cb.maxTokensPerSession > 0\n        ? Math.round(cb.maxTokensPerSession) : 100_000,\n      warnAt: typeof cb.warnAt === 'number' && cb.warnAt > 0\n        ? Math.round(cb.warnAt) : 80_000,\n      throttleAt: typeof cb.throttleAt === 'number' && cb.throttleAt > 0\n        ? Math.round(cb.throttleAt) : 95_000,\n    };\n  }\n\n  // Validate glob patterns \u2014 exclude unsafe regex patterns\n  const include = _validatePatterns(raw.include, defaults.include);\n  const exclude = _validatePatterns(raw.exclude, defaults.exclude);\n\n  return {\n    version,\n    languages,\n    include,\n    exclude,\n    maxFileSize,\n    extractDocstrings,\n    trackCallSites,\n    enableEmbeddings,\n    embeddingModel,\n    embeddingDim,\n    useVecIndex,\n    semanticEngine,\n    turboquantMemDocs,\n    turboquantBits,\n    turbovecMemDocs,\n    turbovecBits,\n    typesenseDashboard,\n    qdrantDashboard,\n    minLogLevel,\n    frameworkHints,\n    fuzzyResolutionThreshold,\n    enableArchitecture: finalEnableArchitecture,\n    cavemanMode,\n    shellCompressionLevel,\n    syncWarningThreshold,\n    enableMemory,\n    memorySearchAlpha,\n    memoryKeepRaw,\n    memoryMaxObservations,\n    memorySessionTimeout,\n    memoryContextLimit,\n    memoryContextThreshold,\n    memoryExcludePatterns,\n    enableWatchmen: enableWatchmen && enableMemory,\n    watchmenThreshold,\n    watchmenSynthesisMode,\n    watchmenLocalModel,\n    enableWiki,\n    wikiSynthesisMode,\n    wikiLocalModel,\n    wikiSources,\n    wikiAutoResolveConflicts,\n    wikiLintFrequency,\n    wikiContextLimit,\n    wikiContextThreshold,\n    enableDocs,\n    docsInclude,\n    docsExclude,\n    docsLinkCode,\n    docsContextLimit,\n    docsContextThreshold,\n    docsMaxFileSize,\n    docsSummarization,\n    enableData,\n    dataInclude,\n    dataExclude,\n    dataLinkCode,\n    dataContextLimit,\n    dataMaxFileSize,\n    dataMaxRows,\n    dataQueryLimit,\n    dataMaxResponseTokens,\n    enableSecurity,\n    securityDatabases,\n    securityAutoEnrich,\n    securityEnrichMaxAgeDays,\n    securityLicensePolicy,\n    enablePatterns,\n    patternLibraryPath,\n    patternSeverityThreshold,\n    enableCodeHealth,\n    enableNavigation,\n    enableComplexity,\n    enableGitContext,\n    enableEditPrimitives,\n    enableBranch,\n    enableAgentUtils,\n    enableGeneralCompression,\n    enableShellExec: shellCompressionLevel !== 'off',\n    ...(architectureLayers !== undefined ? { architectureLayers } : {}),\n    ...(contextBudget !== undefined ? { contextBudget } : {}),\n  };\n}\n\nfunction _validateArchitectureLayers(raw: unknown): Record<string, string[]> | undefined {\n  if (raw === undefined || raw === null) return undefined;\n  if (typeof raw !== 'object' || Array.isArray(raw)) return undefined;\n  const result: Record<string, string[]> = {};\n  for (const [key, val] of Object.entries(raw as Record<string, unknown>)) {\n    if (typeof key !== 'string') continue;\n    if (!Array.isArray(val)) continue;\n    const patterns = val.filter((p): p is string => typeof p === 'string' && isSafeRegex(p));\n    if (patterns.length > 0) result[key] = patterns;\n  }\n  return Object.keys(result).length > 0 ? result : undefined;\n}\n\nfunction _validatePatterns(raw: unknown, fallback: string[]): string[] {\n  if (!Array.isArray(raw)) return fallback;\n  const valid: string[] = [];\n  for (const p of raw) {\n    if (typeof p !== 'string') continue;\n    if (!isSafeRegex(p)) {\n      logWarn(`Unsafe regex pattern skipped: ${p}`);\n      continue;\n    }\n    valid.push(p);\n  }\n  return valid;\n}\n\n// \u2500\u2500 Migration helpers \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\n/**\n * Upgrades shallow exclude patterns (e.g. \"node_modules/**\") to recursive ones\n * (e.g. \"** /node_modules/**\") so nested directories are excluded at any depth.\n */\nconst SHALLOW_TO_RECURSIVE: Record<string, string> = {\n  'node_modules/**': '**/node_modules/**',\n  'dist/**': '**/dist/**',\n  'build/**': '**/build/**',\n  '.git/**': '**/.git/**',\n  '.kirograph/**': '**/.kirograph/**',\n};\n\nfunction migrateExcludePatterns(patterns: string[]): string[] {\n  return patterns.map(p => SHALLOW_TO_RECURSIVE[p] ?? p);\n}\n\n// \u2500\u2500 Load / Save \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport async function loadConfig(projectRoot: string): Promise<KiroGraphConfig> {\n  const dir = path.join(projectRoot, KIROGRAPH_DIR);\n  const cfgPath = path.join(dir, CONFIG_FILE);\n\n  if (!fs.existsSync(cfgPath)) {\n    // Create default config file\n    const defaults = createDefaultConfig(projectRoot);\n    await fs.promises.mkdir(dir, { recursive: true });\n    await _writeAtomic(cfgPath, defaults);\n    return defaults;\n  }\n\n  let raw: unknown;\n  try {\n    const text = await fs.promises.readFile(cfgPath, 'utf8');\n    raw = JSON.parse(text);\n  } catch (err) {\n    logError('Config parse error', { path: cfgPath, error: err instanceof Error ? err.message : String(err) });\n    return createDefaultConfig(projectRoot);\n  }\n\n  const config = validateConfig(raw);\n\n  // Migrate v1 \u2192 v2: upgrade shallow exclude patterns to recursive\n  if (config.version < 2) {\n    config.version = 2;\n    config.exclude = migrateExcludePatterns(config.exclude);\n    await fs.promises.mkdir(dir, { recursive: true });\n    await _writeAtomic(cfgPath, config);\n  }\n\n  return config;\n}\n\nexport async function saveConfig(projectRoot: string, config: KiroGraphConfig): Promise<void> {\n  const dir = path.join(projectRoot, KIROGRAPH_DIR);\n  const cfgPath = path.join(dir, CONFIG_FILE);\n  await fs.promises.mkdir(dir, { recursive: true });\n  await _writeAtomic(cfgPath, config);\n}\n\nasync function _writeAtomic(cfgPath: string, config: KiroGraphConfig): Promise<void> {\n  const tmp = cfgPath + '.tmp';\n  await fs.promises.writeFile(tmp, JSON.stringify(config, null, 2), 'utf8');\n  await fs.promises.rename(tmp, cfgPath);\n}\n\n// \u2500\u2500 Update helpers \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport async function updateConfig(\n  projectRoot: string,\n  patch: Partial<KiroGraphConfig>\n): Promise<KiroGraphConfig> {\n  const current = await loadConfig(projectRoot);\n  const updated = validateConfig({ ...current, ...patch });\n  await saveConfig(projectRoot, updated);\n  return updated;\n}\n\nexport async function addIncludePatterns(projectRoot: string, patterns: string[]): Promise<void> {\n  const config = await loadConfig(projectRoot);\n  const existing = new Set(config.include);\n  const toAdd = patterns.filter(p => isSafeRegex(p) && !existing.has(p));\n  if (toAdd.length === 0) return;\n  await saveConfig(projectRoot, { ...config, include: [...config.include, ...toAdd] });\n}\n\nexport async function addExcludePatterns(projectRoot: string, patterns: string[]): Promise<void> {\n  const config = await loadConfig(projectRoot);\n  const existing = new Set(config.exclude);\n  const toAdd = patterns.filter(p => isSafeRegex(p) && !existing.has(p));\n  if (toAdd.length === 0) return;\n  await saveConfig(projectRoot, { ...config, exclude: [...config.exclude, ...toAdd] });\n}\n\n// \u2500\u2500 File inclusion check \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport function shouldIncludeFile(config: KiroGraphConfig, relPath: string): boolean {\n  // Check exclude patterns first\n  for (const pattern of config.exclude) {\n    if (picomatch(pattern)(relPath)) return false;\n  }\n  // If include patterns are specified, file must match at least one\n  if (config.include.length > 0) {\n    return config.include.some(pattern => picomatch(pattern)(relPath));\n  }\n  return true;\n}\n"],
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+  "sourcesContent": ["/**\n * KiroGraph Config System\n *\n * Mirrors CodeGraph src/config.ts \u2014 load, save, validate, and provide defaults\n * for KiroGraph configuration.\n */\n\nimport * as fs from 'fs';\nimport * as path from 'path';\nimport picomatch from 'picomatch';\nimport { logWarn, logError } from './errors';\n\n// \u2500\u2500 Types \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport interface KiroGraphConfig {\n  version: number;\n  languages: string[];\n  include: string[];\n  exclude: string[];\n  maxFileSize: number;\n  extractDocstrings: boolean;\n  trackCallSites: boolean;\n  // Parity fields:\n  enableEmbeddings: boolean;\n  embeddingModel: string;\n  embeddingDim: number;\n  /** @deprecated Use semanticEngine instead. Kept for backwards compatibility. */\n  useVecIndex: boolean;\n  semanticEngine: 'cosine' | 'turboquant' | 'turbovec' | 'sqlite-vec' | 'orama' | 'pglite' | 'lancedb' | 'qdrant' | 'typesense';\n  /** Apply TurboQuant ANN index to memory observations and doc sections. Default: false. */\n  turboquantMemDocs: boolean;\n  /** TurboQuant bits per coordinate (1\u20138). Controls compression/quality tradeoff. Default: 3 (\u224825\u00D7). */\n  turboquantBits: number;\n  /** Apply TurboVec ANN index to memory observations and doc sections. Default: false. */\n  turbovecMemDocs: boolean;\n  /** TurboVec bits per coordinate (2, 3, or 4). Controls compression/quality tradeoff. Default: 4. */\n  turbovecBits: number;\n  typesenseDashboard: boolean;\n  qdrantDashboard: boolean;\n  minLogLevel: 'debug' | 'info' | 'warn' | 'error';\n  frameworkHints: string[];\n  fuzzyResolutionThreshold: number; // 0.0\u20131.0\n  /** Enable architecture analysis (package graph + layer detection). Default: false. */\n  enableArchitecture: boolean;\n  /**\n   * User-defined layer \u2192 glob pattern overrides.\n   * When set, config-defined layers win over auto-detected ones.\n   * Example: { \"api\": [\"src/routes/**\", \"src/controllers/**\"] }\n   */\n  architectureLayers?: Record<string, string[]>;\n  /** Agent communication style injected at agentSpawn. Default: 'off'. */\n  cavemanMode: 'off' | 'lite' | 'full' | 'ultra';\n  /** Shell compression level for kirograph_exec. 'off' disables the hook/steering. Default: 'normal'. */\n  shellCompressionLevel: 'off' | 'normal' | 'aggressive' | 'ultra';\n  /**\n   * Number of pending (unindexed) files above which kirograph_status warns the agent.\n   * Set to 0 to disable the warning. Default: 10.\n   */\n  syncWarningThreshold: number;\n  /** Enable persistent cross-session memory. Default: false. */\n  enableMemory: boolean;\n  /** FTS/vector blend for memory search: 0 = FTS only, 1 = vector only. Default: 0.5. */\n  memorySearchAlpha: number;\n  /** Store uncompressed originals when caveman is on. Default: false. */\n  memoryKeepRaw: boolean;\n  /** Auto-prune threshold (max observations). 0 = no limit. Default: 10000. */\n  memoryMaxObservations: number;\n  /** Seconds of inactivity before auto-closing a session. Default: 7200. */\n  memorySessionTimeout: number;\n  /** Max observations shown in kirograph_context. Default: 3. */\n  memoryContextLimit: number;\n  /** Min relevance score to include memory in context. Default: 0.3. */\n  memoryContextThreshold: number;\n  /** Glob patterns for paths to never capture in memory. Default: []. */\n  memoryExcludePatterns: string[];\n  /** Enable watchmen \u2014 auto-synthesize workspace briefs from memory observations. Requires enableMemory. Default: false. */\n  enableWatchmen: boolean;\n  /** Minimum new observations since last synthesis before watchmenReady fires. Default: 5. */\n  watchmenThreshold: number;\n  /**\n   * How synthesis is performed.\n   * 'local' \u2014 runs a local HuggingFace model via @huggingface/transformers (no API cost, works for all tools).\n   * 'agent' \u2014 delegates to the active AI agent via askAgent hook (Kiro only, consumes agent tokens).\n   * Default: 'local'.\n   */\n  watchmenSynthesisMode: 'local' | 'agent';\n  /** HuggingFace model ID for local synthesis. Only used when watchmenSynthesisMode is 'local'. Default: 'onnx-community/gemma-4-E4B-it-ONNX'. */\n  watchmenLocalModel: string;\n  /** Enable documentation indexing and navigation. Default: false. */\n  enableDocs: boolean;\n  /** Glob patterns for documentation files to include. */\n  docsInclude: string[];\n  /** Glob patterns for documentation files to exclude. */\n  docsExclude: string[];\n  /** Enable auto-linking of doc sections to code symbols. Default: true. */\n  docsLinkCode: boolean;\n  /** Max doc sections to include in kirograph_context. 0 = disabled. Default: 0. */\n  docsContextLimit: number;\n  /** Min relevance score to include a doc section in context. Default: 0.3. */\n  docsContextThreshold: number;\n  /** Max file size for doc files (bytes). Default: 1MB. */\n  docsMaxFileSize: number;\n  /** Summarization strategy. Default: 'first-sentence'. */\n  docsSummarization: 'embedding' | 'first-sentence' | 'off';\n  /** Enable LLM-maintained wiki (entity pages in .kirograph/wiki/). Default: false. */\n  enableWiki: boolean;\n  /** Wiki synthesis mode. Default: 'agent'. */\n  wikiSynthesisMode: 'agent' | 'local';\n  /** HuggingFace model for local wiki synthesis. */\n  wikiLocalModel: string;\n  /** Glob patterns for auto-ingest wiki sources. Default: ['docs/']. */\n  wikiSources: string[];\n  /** Auto-resolve wiki conflicts by source date. Default: false. */\n  wikiAutoResolveConflicts: boolean;\n  /** Lint frequency: 'weekly' (every ~20 sessions) or 'off'. Default: 'off'. */\n  wikiLintFrequency: 'weekly' | 'off';\n  /** Max wiki pages to include in kirograph_context. Default: 3. */\n  wikiContextLimit: number;\n  /** Min FTS score to include wiki page in context. Default: 0.4. */\n  wikiContextThreshold: number;\n  /** Enable tabular data indexing and querying. Default: false. */\n  enableData: boolean;\n  /** Glob patterns for data files to include. */\n  dataInclude: string[];\n  /** Glob patterns for data files to exclude. */\n  dataExclude: string[];\n  /** Enable auto-linking of data files to code symbols. Default: true. */\n  dataLinkCode: boolean;\n  /** Max datasets to include in kirograph_context. 0 = disabled. Default: 0. */\n  dataContextLimit: number;\n  /** Max file size for data files (bytes). Default: 50MB. */\n  dataMaxFileSize: number;\n  /** Max rows to index per file. Default: 1,000,000. */\n  dataMaxRows: number;\n  /** Max rows returned per query. Default: 500. */\n  dataQueryLimit: number;\n  /** Max token budget per response. Default: 8000. */\n  dataMaxResponseTokens: number;\n  /** Enable security analysis (dependency scanning + vulnerability detection). Default: false. */\n  enableSecurity: boolean;\n  /** Vulnerability databases to query. Default: ['OSV']. */\n  securityDatabases: string[];\n  /** Enable AST-level structural pattern matching (SAST) during indexing. Default: false. */\n  enablePatterns: boolean;\n  /** Enable code health tools (hotspots, dead code, path analysis, type hierarchy). Default: false. */\n  enableCodeHealth: boolean;\n  /** Enable navigation tools (status, files, impact). Default: false. */\n  enableNavigation: boolean;\n  /** Enable complexity metrics tools. Default: false. */\n  enableComplexity: boolean;\n  /** Enable git-context tools (diff_context, commit_context, flows, etc.). Default: false. */\n  enableGitContext: boolean;\n  /** Enable atomic edit primitive tools (str_replace, insert_at, etc.) and refactor. Default: false. */\n  enableEditPrimitives: boolean;\n  /** Enable multi-branch graph indexing tools. Default: false. */\n  enableBranch: boolean;\n  /** @deprecated Dissolved \u2014 tools moved to enableCodeHealth, enableGitContext, enableArchitecture, enableEditPrimitives. Kept in KNOWN_FIELDS for silent backwards compatibility. */\n  enableAdvancedAnalysis?: boolean;\n  /** Enable agent utility tools (file caching, budget tracking). Default: true. */\n  enableAgentUtils: boolean;\n  /** Enable general-purpose compression tool (kirograph_compress). Default: false. */\n  enableGeneralCompression: boolean;\n  /** Derived from shellCompressionLevel \u2014 true when compression is enabled. Controls kirograph_exec. */\n  enableShellExec: boolean;\n  /** Path to a directory of user-supplied YAML rule files. Merged with bundled library (user rules win on id conflict). Default: undefined. */\n  patternLibraryPath: string | undefined;\n  /** Minimum severity level for storing pattern matches during index-time analysis. Default: 'low'. */\n  patternSeverityThreshold: 'critical' | 'high' | 'medium' | 'low';\n  /** Auto-run vulnerability enrichment after manifest parsing. Default: true. */\n  securityAutoEnrich: boolean;\n  /** Max age in days for vulnerability data before showing a staleness warning. Default: 7. */\n  securityEnrichMaxAgeDays: number;\n  /**\n   * License policy for dependency compliance.\n   * deny: licenses to block (build fails / command exits non-zero).\n   * warn: licenses to flag as warnings.\n   * Patterns support wildcards: GPL-* matches GPL-2.0, GPL-3.0, etc.\n   * Default: { deny: [], warn: [] }.\n   */\n  securityLicensePolicy: {\n    deny: string[];\n    warn: string[];\n  };\n  /** Context budget governance settings. */\n  contextBudget?: {\n    maxTokensPerSession: number;\n    warnAt: number;\n    throttleAt: number;\n  };\n}\n\n// \u2500\u2500 Constants \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nconst KIROGRAPH_DIR = '.kirograph';\nconst CONFIG_FILE = 'config.json';\n\nconst KNOWN_FIELDS = new Set<string>([\n  'version', 'languages', 'include', 'exclude', 'maxFileSize',\n  'extractDocstrings', 'trackCallSites', 'enableEmbeddings', 'embeddingModel', 'embeddingDim',\n  'useVecIndex', 'semanticEngine', 'turboquantMemDocs', 'turboquantBits', 'turbovecMemDocs', 'turbovecBits', 'typesenseDashboard', 'qdrantDashboard',\n  'minLogLevel', 'frameworkHints', 'fuzzyResolutionThreshold',\n  'enableArchitecture', 'architectureLayers', 'cavemanMode', 'shellCompressionLevel', 'syncWarningThreshold',\n  'enableMemory', 'memorySearchAlpha', 'memoryKeepRaw', 'memoryMaxObservations',\n  'memorySessionTimeout', 'memoryContextLimit', 'memoryContextThreshold', 'memoryExcludePatterns',\n  'enableWatchmen', 'watchmenThreshold', 'watchmenSynthesisMode', 'watchmenLocalModel',\n  'enableWiki', 'wikiSynthesisMode', 'wikiLocalModel', 'wikiSources',\n  'wikiAutoResolveConflicts', 'wikiLintFrequency', 'wikiContextLimit', 'wikiContextThreshold',\n  'enableDocs', 'docsInclude', 'docsExclude', 'docsLinkCode',\n  'docsContextLimit', 'docsContextThreshold', 'docsMaxFileSize', 'docsSummarization',\n  'enableData', 'dataInclude', 'dataExclude', 'dataLinkCode',\n  'dataContextLimit', 'dataMaxFileSize', 'dataMaxRows', 'dataQueryLimit', 'dataMaxResponseTokens',\n  'enableSecurity', 'securityDatabases', 'securityAutoEnrich', 'securityEnrichMaxAgeDays', 'securityLicensePolicy',\n  'enablePatterns', 'patternLibraryPath', 'patternSeverityThreshold',\n  'enableCodeHealth', 'enableNavigation', 'enableComplexity', 'enableGitContext',\n  'enableEditPrimitives', 'enableBranch',\n  'enableAgentUtils', 'enableGeneralCompression',\n  'contextBudget',\n  // Legacy aliases / derived fields (accepted but ignored or recomputed)\n  'enableCompression', 'compressionLevel', 'enableShellExec',\n  // Deprecated: dissolved flag kept here so old configs don't warn\n  'enableAdvancedAnalysis',\n]);\n\nconst LOG_LEVELS = new Set(['debug', 'info', 'warn', 'error']);\n\n// \u2500\u2500 ReDoS-safe regex check \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\n/**\n * Returns false if the pattern is potentially dangerous (ReDoS risk) or too long.\n * Checks for catastrophic backtracking patterns like (a+)+ or (a|a)+.\n */\nexport function isSafeRegex(pattern: string): boolean {\n  if (pattern.length > 100) return false;\n  // Detect nested quantifiers: (x+)+ or (x*)+ or (x+)* etc.\n  if (/\\([^)]*[+*][^)]*\\)[+*?]/.test(pattern)) return false;\n  // Detect alternation with overlap: (a|a)+ style\n  if (/\\([^)]*\\|[^)]*\\)[+*]/.test(pattern)) return false;\n  return true;\n}\n\n// \u2500\u2500 Default config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport function createDefaultConfig(_projectRoot?: string): KiroGraphConfig {\n  return {\n    version: 2,\n    languages: [],\n    include: [],\n    exclude: [\n      '**/node_modules/**', '**/dist/**', '**/build/**', '**/.git/**', '**/.kirograph/**',\n      // Compiled / minified output and build artifacts \u2014 not meaningful source to index,\n      // and large bundles can crash the parser (issue #33). '*.min.js' was previously\n      // non-recursive (root-only); use '**/' so nested bundles are matched.\n      '**/*.min.js', '**/*.min.css', '**/*.bundle.js', '**/*.map',\n      '**/out/**', '**/.next/**', '**/.nuxt/**', '**/.vite/**', '**/.svelte-kit/**',\n      '**/public/build/**', '**/Resources/Public/**',\n    ],\n    maxFileSize: 1_048_576,\n    extractDocstrings: false,\n    trackCallSites: false,\n    enableEmbeddings: false,\n    embeddingModel: 'nomic-ai/nomic-embed-text-v1.5',\n    embeddingDim: 768,\n    useVecIndex: false,\n    semanticEngine: 'cosine',\n    turboquantMemDocs: false,\n    turboquantBits: 3,\n    turbovecMemDocs: false,\n    turbovecBits: 4,\n    typesenseDashboard: false,\n    qdrantDashboard: false,\n    minLogLevel: 'warn',\n    frameworkHints: [],\n    fuzzyResolutionThreshold: 0.5,\n    enableArchitecture: false,\n    cavemanMode: 'off',\n    shellCompressionLevel: 'off',\n    syncWarningThreshold: 10,\n    enableMemory: false,\n    memorySearchAlpha: 0.5,\n    memoryKeepRaw: false,\n    memoryMaxObservations: 10000,\n    memorySessionTimeout: 7200,\n    memoryContextLimit: 3,\n    memoryContextThreshold: 0.3,\n    memoryExcludePatterns: [],\n    enableWatchmen: false,\n    watchmenThreshold: 5,\n    watchmenSynthesisMode: 'local',\n    watchmenLocalModel: 'onnx-community/gemma-4-E4B-it-ONNX',\n    enableWiki: false,\n    wikiSynthesisMode: 'agent' as const,\n    wikiLocalModel: 'onnx-community/gemma-4-E4B-it-ONNX',\n    wikiSources: ['docs/'],\n    wikiAutoResolveConflicts: false,\n    wikiLintFrequency: 'off' as const,\n    wikiContextLimit: 3,\n    wikiContextThreshold: 0.4,\n    enableDocs: false,\n    docsInclude: ['**/*.md', '**/*.mdx', '**/*.rst', '**/*.adoc', '**/*.asciidoc', '**/*.rdoc', '**/*.org', '**/*.cheatmd', 'docs/**/*.txt', 'docs/**/*.html'],\n    docsExclude: ['node_modules/**', '**/CHANGELOG*', '**/LICENSE*', '**/CHANGES*', 'dist/**', 'build/**', 'coverage/**', '.git/**', '**/generated/**', '**/auto-generated/**', '**/vendor/**', '_build/**'],\n    docsLinkCode: true,\n    docsContextLimit: 0,\n    docsContextThreshold: 0.3,\n    docsMaxFileSize: 1_048_576,\n    docsSummarization: 'first-sentence',\n    enableData: false,\n    dataInclude: ['**/*.csv', '**/*.tsv', '**/*.jsonl', '**/*.ndjson', '**/*.xlsx', '**/*.xls', '**/*.parquet', 'data/**/*.json', '**/*.pdf'],\n    dataExclude: ['node_modules/**', 'dist/**', 'build/**', '.git/**', '**/package-lock.json', '**/yarn.lock', '**/pnpm-lock.yaml', '**/tsconfig.json', '**/jsconfig.json', 'coverage/**', '**/generated/**'],\n    dataLinkCode: true,\n    dataContextLimit: 0,\n    dataMaxFileSize: 52_428_800,\n    dataMaxRows: 1_000_000,\n    dataQueryLimit: 500,\n    dataMaxResponseTokens: 8000,\n    enableSecurity: false,\n    securityDatabases: ['OSV'],\n    securityAutoEnrich: true,\n    securityEnrichMaxAgeDays: 7,\n    securityLicensePolicy: { deny: [], warn: [] },\n    enablePatterns: false,\n    patternLibraryPath: undefined,\n    patternSeverityThreshold: 'low',\n    enableCodeHealth: false,\n    enableNavigation: false,\n    enableComplexity: false,\n    enableGitContext: false,\n    enableEditPrimitives: false,\n    enableBranch: false,\n    enableAgentUtils: true,\n    enableGeneralCompression: false,\n    enableShellExec: false,\n  };\n}\n\n// \u2500\u2500 Validation \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport function validateConfig(config: unknown): KiroGraphConfig {\n  const defaults = createDefaultConfig();\n\n  if (typeof config !== 'object' || config === null) {\n    return defaults;\n  }\n\n  const raw = config as Record<string, unknown>;\n\n  // Warn about unknown fields\n  for (const key of Object.keys(raw)) {\n    if (!KNOWN_FIELDS.has(key)) {\n      logWarn(`Unknown config field: ${key}`);\n    }\n  }\n\n  // Validate and coerce each field\n  const version = typeof raw.version === 'number' ? raw.version : defaults.version;\n  const languages = Array.isArray(raw.languages) && raw.languages.every(l => typeof l === 'string')\n    ? (raw.languages as string[])\n    : defaults.languages;\n  const maxFileSize = typeof raw.maxFileSize === 'number' && raw.maxFileSize > 0\n    ? raw.maxFileSize\n    : defaults.maxFileSize;\n  const extractDocstrings = typeof raw.extractDocstrings === 'boolean'\n    ? raw.extractDocstrings\n    : defaults.extractDocstrings;\n  const trackCallSites = typeof raw.trackCallSites === 'boolean'\n    ? raw.trackCallSites\n    : defaults.trackCallSites;\n  const enableEmbeddings = typeof raw.enableEmbeddings === 'boolean'\n    ? raw.enableEmbeddings\n    : defaults.enableEmbeddings;\n  const embeddingModel = typeof raw.embeddingModel === 'string' && raw.embeddingModel.length > 0\n    ? raw.embeddingModel\n    : defaults.embeddingModel;\n  const embeddingDim = typeof raw.embeddingDim === 'number' && raw.embeddingDim > 0\n    ? raw.embeddingDim\n    : defaults.embeddingDim;\n  const useVecIndex = typeof raw.useVecIndex === 'boolean'\n    ? raw.useVecIndex\n    : defaults.useVecIndex;\n  const SEMANTIC_ENGINES = new Set(['cosine', 'turboquant', 'turbovec', 'sqlite-vec', 'orama', 'pglite', 'lancedb', 'qdrant', 'typesense']);\n  // useVecIndex is a legacy alias: if set and no explicit semanticEngine, map it\n  const semanticEngine = typeof raw.semanticEngine === 'string' && SEMANTIC_ENGINES.has(raw.semanticEngine)\n    ? (raw.semanticEngine as KiroGraphConfig['semanticEngine'])\n    : useVecIndex ? 'sqlite-vec' : defaults.semanticEngine;\n  const turboquantMemDocs = typeof raw.turboquantMemDocs === 'boolean'\n    ? raw.turboquantMemDocs\n    : defaults.turboquantMemDocs;\n  const turboquantBits = typeof raw.turboquantBits === 'number'\n    && raw.turboquantBits >= 1 && raw.turboquantBits <= 8\n    ? Math.round(raw.turboquantBits)\n    : defaults.turboquantBits;\n  const turbovecMemDocs = typeof raw.turbovecMemDocs === 'boolean'\n    ? raw.turbovecMemDocs\n    : defaults.turbovecMemDocs;\n  const TURBOVEC_BIT_WIDTHS = new Set([2, 3, 4]);\n  const turbovecBits = typeof raw.turbovecBits === 'number' && TURBOVEC_BIT_WIDTHS.has(Math.round(raw.turbovecBits))\n    ? Math.round(raw.turbovecBits)\n    : defaults.turbovecBits;\n  const typesenseDashboard = typeof raw.typesenseDashboard === 'boolean'\n    ? raw.typesenseDashboard\n    : defaults.typesenseDashboard;\n  const qdrantDashboard = typeof raw.qdrantDashboard === 'boolean'\n    ? raw.qdrantDashboard\n    : defaults.qdrantDashboard;\n  const minLogLevel = typeof raw.minLogLevel === 'string' && LOG_LEVELS.has(raw.minLogLevel)\n    ? (raw.minLogLevel as KiroGraphConfig['minLogLevel'])\n    : defaults.minLogLevel;\n  const frameworkHints = Array.isArray(raw.frameworkHints) && raw.frameworkHints.every(h => typeof h === 'string')\n    ? (raw.frameworkHints as string[])\n    : defaults.frameworkHints;\n  const fuzzyResolutionThreshold = typeof raw.fuzzyResolutionThreshold === 'number'\n    && raw.fuzzyResolutionThreshold >= 0\n    && raw.fuzzyResolutionThreshold <= 1\n    ? raw.fuzzyResolutionThreshold\n    : defaults.fuzzyResolutionThreshold;\n  const enableArchitecture = typeof raw.enableArchitecture === 'boolean'\n    ? raw.enableArchitecture\n    : defaults.enableArchitecture;\n  const architectureLayers = _validateArchitectureLayers(raw.architectureLayers);\n  const CAVEMAN_MODES = new Set(['off', 'lite', 'full', 'ultra']);\n  const cavemanMode = typeof raw.cavemanMode === 'string' && CAVEMAN_MODES.has(raw.cavemanMode)\n    ? (raw.cavemanMode as KiroGraphConfig['cavemanMode'])\n    : defaults.cavemanMode;\n  const COMPRESSION_LEVELS = new Set(['off', 'normal', 'aggressive', 'ultra']);\n  // Support legacy field names: enableCompression (boolean) and compressionLevel (string)\n  let shellCompressionLevel: KiroGraphConfig['shellCompressionLevel'];\n  if (typeof raw.shellCompressionLevel === 'string' && COMPRESSION_LEVELS.has(raw.shellCompressionLevel)) {\n    shellCompressionLevel = raw.shellCompressionLevel as KiroGraphConfig['shellCompressionLevel'];\n  } else if (typeof raw.compressionLevel === 'string' && COMPRESSION_LEVELS.has(raw.compressionLevel)) {\n    shellCompressionLevel = raw.compressionLevel as KiroGraphConfig['shellCompressionLevel'];\n  } else if (typeof raw.enableCompression === 'boolean') {\n    shellCompressionLevel = raw.enableCompression ? 'normal' : 'off';\n  } else {\n    shellCompressionLevel = defaults.shellCompressionLevel;\n  }\n  const syncWarningThreshold = typeof raw.syncWarningThreshold === 'number' && raw.syncWarningThreshold >= 0\n    ? Math.round(raw.syncWarningThreshold)\n    : defaults.syncWarningThreshold;\n\n  // \u2500\u2500 Memory config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableMemory = typeof raw.enableMemory === 'boolean'\n    ? raw.enableMemory\n    : defaults.enableMemory;\n  const memorySearchAlpha = typeof raw.memorySearchAlpha === 'number'\n    && raw.memorySearchAlpha >= 0 && raw.memorySearchAlpha <= 1\n    ? raw.memorySearchAlpha\n    : defaults.memorySearchAlpha;\n  const memoryKeepRaw = typeof raw.memoryKeepRaw === 'boolean'\n    ? raw.memoryKeepRaw\n    : defaults.memoryKeepRaw;\n  const memoryMaxObservations = typeof raw.memoryMaxObservations === 'number' && raw.memoryMaxObservations >= 0\n    ? Math.round(raw.memoryMaxObservations)\n    : defaults.memoryMaxObservations;\n  const memorySessionTimeout = typeof raw.memorySessionTimeout === 'number' && raw.memorySessionTimeout > 0\n    ? Math.round(raw.memorySessionTimeout)\n    : defaults.memorySessionTimeout;\n  const memoryContextLimit = typeof raw.memoryContextLimit === 'number' && raw.memoryContextLimit >= 0\n    ? Math.round(raw.memoryContextLimit)\n    : defaults.memoryContextLimit;\n  const memoryContextThreshold = typeof raw.memoryContextThreshold === 'number'\n    && raw.memoryContextThreshold >= 0 && raw.memoryContextThreshold <= 1\n    ? raw.memoryContextThreshold\n    : defaults.memoryContextThreshold;\n  const memoryExcludePatterns = Array.isArray(raw.memoryExcludePatterns)\n    && raw.memoryExcludePatterns.every((p: unknown) => typeof p === 'string')\n    ? (raw.memoryExcludePatterns as string[])\n    : defaults.memoryExcludePatterns;\n\n  // \u2500\u2500 Watchmen config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableWatchmen = typeof raw.enableWatchmen === 'boolean'\n    ? raw.enableWatchmen\n    : defaults.enableWatchmen;\n  const watchmenThreshold = typeof raw.watchmenThreshold === 'number' && raw.watchmenThreshold > 0\n    ? Math.round(raw.watchmenThreshold)\n    : defaults.watchmenThreshold;\n  const WATCHMEN_SYNTHESIS_MODES = new Set(['local', 'agent']);\n  const watchmenSynthesisMode = typeof raw.watchmenSynthesisMode === 'string' && WATCHMEN_SYNTHESIS_MODES.has(raw.watchmenSynthesisMode)\n    ? (raw.watchmenSynthesisMode as KiroGraphConfig['watchmenSynthesisMode'])\n    : defaults.watchmenSynthesisMode;\n  const watchmenLocalModel = typeof raw.watchmenLocalModel === 'string' && raw.watchmenLocalModel.length > 0\n    ? raw.watchmenLocalModel\n    : defaults.watchmenLocalModel;\n\n  // \u2500\u2500 Wiki config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableWiki = typeof raw.enableWiki === 'boolean' ? raw.enableWiki : defaults.enableWiki;\n  const wikiSynthesisMode = raw.wikiSynthesisMode === 'local' ? 'local' as const : 'agent' as const;\n  const wikiLocalModel = typeof raw.wikiLocalModel === 'string' ? raw.wikiLocalModel : defaults.wikiLocalModel;\n  const wikiSources = Array.isArray(raw.wikiSources) ? raw.wikiSources : defaults.wikiSources;\n  const wikiAutoResolveConflicts = typeof raw.wikiAutoResolveConflicts === 'boolean' ? raw.wikiAutoResolveConflicts : defaults.wikiAutoResolveConflicts;\n  const wikiLintFrequency = raw.wikiLintFrequency === 'weekly' ? 'weekly' as const : 'off' as const;\n  const wikiContextLimit = typeof raw.wikiContextLimit === 'number' ? raw.wikiContextLimit : defaults.wikiContextLimit;\n  const wikiContextThreshold = typeof raw.wikiContextThreshold === 'number' ? raw.wikiContextThreshold : defaults.wikiContextThreshold;\n\n  // \u2500\u2500 Docs config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableDocs = typeof raw.enableDocs === 'boolean'\n    ? raw.enableDocs\n    : defaults.enableDocs;\n  const docsInclude = Array.isArray(raw.docsInclude)\n    && raw.docsInclude.every((p: unknown) => typeof p === 'string')\n    ? (raw.docsInclude as string[])\n    : defaults.docsInclude;\n  const docsExclude = Array.isArray(raw.docsExclude)\n    && raw.docsExclude.every((p: unknown) => typeof p === 'string')\n    ? (raw.docsExclude as string[])\n    : defaults.docsExclude;\n  const docsLinkCode = typeof raw.docsLinkCode === 'boolean'\n    ? raw.docsLinkCode\n    : defaults.docsLinkCode;\n  const docsContextLimit = typeof raw.docsContextLimit === 'number' && raw.docsContextLimit >= 0\n    ? Math.round(raw.docsContextLimit)\n    : defaults.docsContextLimit;\n  const docsContextThreshold = typeof raw.docsContextThreshold === 'number'\n    && raw.docsContextThreshold >= 0 && raw.docsContextThreshold <= 1\n    ? raw.docsContextThreshold\n    : defaults.docsContextThreshold;\n  const docsMaxFileSize = typeof raw.docsMaxFileSize === 'number' && raw.docsMaxFileSize > 0\n    ? raw.docsMaxFileSize\n    : defaults.docsMaxFileSize;\n  const DOCS_SUMMARIZATION_MODES = new Set(['embedding', 'first-sentence', 'off']);\n  const docsSummarization = typeof raw.docsSummarization === 'string' && DOCS_SUMMARIZATION_MODES.has(raw.docsSummarization)\n    ? (raw.docsSummarization as KiroGraphConfig['docsSummarization'])\n    : defaults.docsSummarization;\n\n  // \u2500\u2500 Data config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableData = typeof raw.enableData === 'boolean' ? raw.enableData : defaults.enableData;\n  const dataInclude = Array.isArray(raw.dataInclude) && raw.dataInclude.every((p: unknown) => typeof p === 'string')\n    ? (raw.dataInclude as string[]) : defaults.dataInclude;\n  const dataExclude = Array.isArray(raw.dataExclude) && raw.dataExclude.every((p: unknown) => typeof p === 'string')\n    ? (raw.dataExclude as string[]) : defaults.dataExclude;\n  const dataLinkCode = typeof raw.dataLinkCode === 'boolean' ? raw.dataLinkCode : defaults.dataLinkCode;\n  const dataContextLimit = typeof raw.dataContextLimit === 'number' && raw.dataContextLimit >= 0\n    ? Math.round(raw.dataContextLimit) : defaults.dataContextLimit;\n  const dataMaxFileSize = typeof raw.dataMaxFileSize === 'number' && raw.dataMaxFileSize > 0\n    ? raw.dataMaxFileSize : defaults.dataMaxFileSize;\n  const dataMaxRows = typeof raw.dataMaxRows === 'number' && raw.dataMaxRows > 0\n    ? Math.round(raw.dataMaxRows) : defaults.dataMaxRows;\n  const dataQueryLimit = typeof raw.dataQueryLimit === 'number' && raw.dataQueryLimit > 0\n    ? Math.min(Math.round(raw.dataQueryLimit), 500) : defaults.dataQueryLimit;\n  const dataMaxResponseTokens = typeof raw.dataMaxResponseTokens === 'number' && raw.dataMaxResponseTokens > 0\n    ? Math.round(raw.dataMaxResponseTokens) : defaults.dataMaxResponseTokens;\n\n  // \u2500\u2500 Security config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  let enableSecurity: boolean;\n  if (typeof raw.enableSecurity === 'boolean') {\n    enableSecurity = raw.enableSecurity;\n  } else {\n    if (raw.enableSecurity !== undefined) {\n      logWarn('Invalid config field enableSecurity: expected boolean, applying default (false)');\n    }\n    enableSecurity = defaults.enableSecurity;\n  }\n\n  let securityAutoEnrich: boolean;\n  if (typeof raw.securityAutoEnrich === 'boolean') {\n    securityAutoEnrich = raw.securityAutoEnrich;\n  } else {\n    if (raw.securityAutoEnrich !== undefined) {\n      logWarn('Invalid config field securityAutoEnrich: expected boolean, applying default (true)');\n    }\n    securityAutoEnrich = defaults.securityAutoEnrich;\n  }\n\n  let securityEnrichMaxAgeDays: number;\n  if (typeof raw.securityEnrichMaxAgeDays === 'number' && raw.securityEnrichMaxAgeDays > 0) {\n    securityEnrichMaxAgeDays = raw.securityEnrichMaxAgeDays;\n  } else {\n    if (raw.securityEnrichMaxAgeDays !== undefined) {\n      logWarn('Invalid config field securityEnrichMaxAgeDays: expected positive number, applying default (7)');\n    }\n    securityEnrichMaxAgeDays = defaults.securityEnrichMaxAgeDays;\n  }\n\n  const SUPPORTED_SECURITY_DATABASES = new Set(['OSV']);\n  let securityDatabases: string[];\n  if (Array.isArray(raw.securityDatabases) && raw.securityDatabases.every((d: unknown) => typeof d === 'string')) {\n    const valid = (raw.securityDatabases as string[]).filter(d => {\n      if (!SUPPORTED_SECURITY_DATABASES.has(d)) {\n        logWarn(`Unsupported security database \"${d}\" in securityDatabases, ignoring`);\n        return false;\n      }\n      return true;\n    });\n    securityDatabases = valid.length > 0 ? valid : defaults.securityDatabases;\n  } else {\n    if (raw.securityDatabases !== undefined) {\n      logWarn('Invalid config field securityDatabases: expected array of strings, applying default ([\"OSV\"])');\n    }\n    securityDatabases = defaults.securityDatabases;\n  }\n\n  let securityLicensePolicy: KiroGraphConfig['securityLicensePolicy'];\n  if (raw.securityLicensePolicy && typeof raw.securityLicensePolicy === 'object' && !Array.isArray(raw.securityLicensePolicy)) {\n    const rawPolicy = raw.securityLicensePolicy as Record<string, unknown>;\n    const deny = Array.isArray(rawPolicy.deny) && rawPolicy.deny.every((p: unknown) => typeof p === 'string')\n      ? (rawPolicy.deny as string[])\n      : defaults.securityLicensePolicy.deny;\n    const warn = Array.isArray(rawPolicy.warn) && rawPolicy.warn.every((p: unknown) => typeof p === 'string')\n      ? (rawPolicy.warn as string[])\n      : defaults.securityLicensePolicy.warn;\n    securityLicensePolicy = { deny, warn };\n  } else {\n    if (raw.securityLicensePolicy !== undefined) {\n      logWarn('Invalid config field securityLicensePolicy: expected object with deny/warn arrays, applying default');\n    }\n    securityLicensePolicy = defaults.securityLicensePolicy;\n  }\n\n  // \u2500\u2500 Patterns config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  let enablePatterns: boolean;\n  if (typeof raw.enablePatterns === 'boolean') {\n    enablePatterns = raw.enablePatterns;\n  } else {\n    if (raw.enablePatterns !== undefined) {\n      logWarn('Invalid config field enablePatterns: expected boolean, applying default (false)');\n    }\n    enablePatterns = defaults.enablePatterns;\n  }\n\n  let patternLibraryPath: string | undefined;\n  if (raw.patternLibraryPath === undefined || raw.patternLibraryPath === null) {\n    patternLibraryPath = undefined;\n  } else if (typeof raw.patternLibraryPath === 'string') {\n    patternLibraryPath = raw.patternLibraryPath;\n  } else {\n    logWarn('Invalid config field patternLibraryPath: expected string or undefined, applying default (undefined)');\n    patternLibraryPath = defaults.patternLibraryPath;\n  }\n\n  const PATTERN_SEVERITY_LEVELS = new Set(['critical', 'high', 'medium', 'low']);\n  let patternSeverityThreshold: KiroGraphConfig['patternSeverityThreshold'];\n  if (typeof raw.patternSeverityThreshold === 'string' && PATTERN_SEVERITY_LEVELS.has(raw.patternSeverityThreshold)) {\n    patternSeverityThreshold = raw.patternSeverityThreshold as KiroGraphConfig['patternSeverityThreshold'];\n  } else {\n    if (raw.patternSeverityThreshold !== undefined) {\n      logWarn('Invalid config field patternSeverityThreshold: expected critical|high|medium|low, applying default (low)');\n    }\n    patternSeverityThreshold = defaults.patternSeverityThreshold;\n  }\n\n  // \u2500\u2500 Tool group flags \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  const enableCodeHealth = typeof raw.enableCodeHealth === 'boolean'\n    ? raw.enableCodeHealth\n    : defaults.enableCodeHealth;\n  const enableNavigation = typeof raw.enableNavigation === 'boolean'\n    ? raw.enableNavigation\n    : defaults.enableNavigation;\n  const enableComplexity = typeof raw.enableComplexity === 'boolean'\n    ? raw.enableComplexity\n    : defaults.enableComplexity;\n  const enableGitContext = typeof raw.enableGitContext === 'boolean'\n    ? raw.enableGitContext\n    : defaults.enableGitContext;\n  const enableEditPrimitives = typeof raw.enableEditPrimitives === 'boolean'\n    ? raw.enableEditPrimitives\n    : defaults.enableEditPrimitives;\n  const enableBranch = typeof raw.enableBranch === 'boolean'\n    ? raw.enableBranch\n    : defaults.enableBranch;\n  // enableAdvancedAnalysis is deprecated \u2014 silently accepted, not applied\n  const enableAgentUtils = typeof raw.enableAgentUtils === 'boolean'\n    ? raw.enableAgentUtils\n    : defaults.enableAgentUtils;\n  const enableGeneralCompression = typeof raw.enableGeneralCompression === 'boolean'\n    ? raw.enableGeneralCompression\n    : defaults.enableGeneralCompression;\n\n  // Dependency constraint: enableSecurity requires enableArchitecture\n  let finalEnableArchitecture = enableArchitecture;\n  if (enableSecurity && !enableArchitecture) {\n    logWarn('enableSecurity requires enableArchitecture \\u2014 auto-enabling architecture analysis');\n    finalEnableArchitecture = true;\n  }\n\n  // \u2500\u2500 Context budget config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n  let contextBudget: KiroGraphConfig['contextBudget'] | undefined;\n  if (raw.contextBudget && typeof raw.contextBudget === 'object' && !Array.isArray(raw.contextBudget)) {\n    const cb = raw.contextBudget as Record<string, unknown>;\n    contextBudget = {\n      maxTokensPerSession: typeof cb.maxTokensPerSession === 'number' && cb.maxTokensPerSession > 0\n        ? Math.round(cb.maxTokensPerSession) : 100_000,\n      warnAt: typeof cb.warnAt === 'number' && cb.warnAt > 0\n        ? Math.round(cb.warnAt) : 80_000,\n      throttleAt: typeof cb.throttleAt === 'number' && cb.throttleAt > 0\n        ? Math.round(cb.throttleAt) : 95_000,\n    };\n  }\n\n  // Validate glob patterns \u2014 exclude unsafe regex patterns\n  const include = _validatePatterns(raw.include, defaults.include);\n  const exclude = _validatePatterns(raw.exclude, defaults.exclude);\n\n  return {\n    version,\n    languages,\n    include,\n    exclude,\n    maxFileSize,\n    extractDocstrings,\n    trackCallSites,\n    enableEmbeddings,\n    embeddingModel,\n    embeddingDim,\n    useVecIndex,\n    semanticEngine,\n    turboquantMemDocs,\n    turboquantBits,\n    turbovecMemDocs,\n    turbovecBits,\n    typesenseDashboard,\n    qdrantDashboard,\n    minLogLevel,\n    frameworkHints,\n    fuzzyResolutionThreshold,\n    enableArchitecture: finalEnableArchitecture,\n    cavemanMode,\n    shellCompressionLevel,\n    syncWarningThreshold,\n    enableMemory,\n    memorySearchAlpha,\n    memoryKeepRaw,\n    memoryMaxObservations,\n    memorySessionTimeout,\n    memoryContextLimit,\n    memoryContextThreshold,\n    memoryExcludePatterns,\n    enableWatchmen: enableWatchmen && enableMemory,\n    watchmenThreshold,\n    watchmenSynthesisMode,\n    watchmenLocalModel,\n    enableWiki,\n    wikiSynthesisMode,\n    wikiLocalModel,\n    wikiSources,\n    wikiAutoResolveConflicts,\n    wikiLintFrequency,\n    wikiContextLimit,\n    wikiContextThreshold,\n    enableDocs,\n    docsInclude,\n    docsExclude,\n    docsLinkCode,\n    docsContextLimit,\n    docsContextThreshold,\n    docsMaxFileSize,\n    docsSummarization,\n    enableData,\n    dataInclude,\n    dataExclude,\n    dataLinkCode,\n    dataContextLimit,\n    dataMaxFileSize,\n    dataMaxRows,\n    dataQueryLimit,\n    dataMaxResponseTokens,\n    enableSecurity,\n    securityDatabases,\n    securityAutoEnrich,\n    securityEnrichMaxAgeDays,\n    securityLicensePolicy,\n    enablePatterns,\n    patternLibraryPath,\n    patternSeverityThreshold,\n    enableCodeHealth,\n    enableNavigation,\n    enableComplexity,\n    enableGitContext,\n    enableEditPrimitives,\n    enableBranch,\n    enableAgentUtils,\n    enableGeneralCompression,\n    enableShellExec: shellCompressionLevel !== 'off',\n    ...(architectureLayers !== undefined ? { architectureLayers } : {}),\n    ...(contextBudget !== undefined ? { contextBudget } : {}),\n  };\n}\n\nfunction _validateArchitectureLayers(raw: unknown): Record<string, string[]> | undefined {\n  if (raw === undefined || raw === null) return undefined;\n  if (typeof raw !== 'object' || Array.isArray(raw)) return undefined;\n  const result: Record<string, string[]> = {};\n  for (const [key, val] of Object.entries(raw as Record<string, unknown>)) {\n    if (typeof key !== 'string') continue;\n    if (!Array.isArray(val)) continue;\n    const patterns = val.filter((p): p is string => typeof p === 'string' && isSafeRegex(p));\n    if (patterns.length > 0) result[key] = patterns;\n  }\n  return Object.keys(result).length > 0 ? result : undefined;\n}\n\nfunction _validatePatterns(raw: unknown, fallback: string[]): string[] {\n  if (!Array.isArray(raw)) return fallback;\n  const valid: string[] = [];\n  for (const p of raw) {\n    if (typeof p !== 'string') continue;\n    if (!isSafeRegex(p)) {\n      logWarn(`Unsafe regex pattern skipped: ${p}`);\n      continue;\n    }\n    valid.push(p);\n  }\n  return valid;\n}\n\n// \u2500\u2500 Migration helpers \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\n/**\n * Upgrades shallow exclude patterns (e.g. \"node_modules/**\") to recursive ones\n * (e.g. \"** /node_modules/**\") so nested directories are excluded at any depth.\n */\nconst SHALLOW_TO_RECURSIVE: Record<string, string> = {\n  'node_modules/**': '**/node_modules/**',\n  'dist/**': '**/dist/**',\n  'build/**': '**/build/**',\n  '.git/**': '**/.git/**',\n  '.kirograph/**': '**/.kirograph/**',\n};\n\nfunction migrateExcludePatterns(patterns: string[]): string[] {\n  return patterns.map(p => SHALLOW_TO_RECURSIVE[p] ?? p);\n}\n\n// \u2500\u2500 Load / Save \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport async function loadConfig(projectRoot: string): Promise<KiroGraphConfig> {\n  const dir = path.join(projectRoot, KIROGRAPH_DIR);\n  const cfgPath = path.join(dir, CONFIG_FILE);\n\n  if (!fs.existsSync(cfgPath)) {\n    // Create default config file\n    const defaults = createDefaultConfig(projectRoot);\n    await fs.promises.mkdir(dir, { recursive: true });\n    await _writeAtomic(cfgPath, defaults);\n    return defaults;\n  }\n\n  let raw: unknown;\n  try {\n    const text = await fs.promises.readFile(cfgPath, 'utf8');\n    raw = JSON.parse(text);\n  } catch (err) {\n    logError('Config parse error', { path: cfgPath, error: err instanceof Error ? err.message : String(err) });\n    return createDefaultConfig(projectRoot);\n  }\n\n  const config = validateConfig(raw);\n\n  // Migrate v1 \u2192 v2: upgrade shallow exclude patterns to recursive\n  if (config.version < 2) {\n    config.version = 2;\n    config.exclude = migrateExcludePatterns(config.exclude);\n    await fs.promises.mkdir(dir, { recursive: true });\n    await _writeAtomic(cfgPath, config);\n  }\n\n  return config;\n}\n\nexport async function saveConfig(projectRoot: string, config: KiroGraphConfig): Promise<void> {\n  const dir = path.join(projectRoot, KIROGRAPH_DIR);\n  const cfgPath = path.join(dir, CONFIG_FILE);\n  await fs.promises.mkdir(dir, { recursive: true });\n  await _writeAtomic(cfgPath, config);\n}\n\nasync function _writeAtomic(cfgPath: string, config: KiroGraphConfig): Promise<void> {\n  const tmp = cfgPath + '.tmp';\n  await fs.promises.writeFile(tmp, JSON.stringify(config, null, 2), 'utf8');\n  await fs.promises.rename(tmp, cfgPath);\n}\n\n// \u2500\u2500 Update helpers \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport async function updateConfig(\n  projectRoot: string,\n  patch: Partial<KiroGraphConfig>\n): Promise<KiroGraphConfig> {\n  const current = await loadConfig(projectRoot);\n  const updated = validateConfig({ ...current, ...patch });\n  await saveConfig(projectRoot, updated);\n  return updated;\n}\n\nexport async function addIncludePatterns(projectRoot: string, patterns: string[]): Promise<void> {\n  const config = await loadConfig(projectRoot);\n  const existing = new Set(config.include);\n  const toAdd = patterns.filter(p => isSafeRegex(p) && !existing.has(p));\n  if (toAdd.length === 0) return;\n  await saveConfig(projectRoot, { ...config, include: [...config.include, ...toAdd] });\n}\n\nexport async function addExcludePatterns(projectRoot: string, patterns: string[]): Promise<void> {\n  const config = await loadConfig(projectRoot);\n  const existing = new Set(config.exclude);\n  const toAdd = patterns.filter(p => isSafeRegex(p) && !existing.has(p));\n  if (toAdd.length === 0) return;\n  await saveConfig(projectRoot, { ...config, exclude: [...config.exclude, ...toAdd] });\n}\n\n// \u2500\u2500 File inclusion check \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\n\nexport function shouldIncludeFile(config: KiroGraphConfig, relPath: string): boolean {\n  // Check exclude patterns first\n  for (const pattern of config.exclude) {\n    if (picomatch(pattern)(relPath)) return false;\n  }\n  // If include patterns are specified, file must match at least one\n  if (config.include.length > 0) {\n    return config.include.some(pattern => picomatch(pattern)(relPath));\n  }\n  return true;\n}\n"],
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