kirograph 0.19.0 → 0.20.0

package/dist/bin/commands/help.js.map

@@ -1,7 +1,7 @@
 {
   "version": 3,
   "sources": ["../../../src/bin/commands/help.ts"],
-  "sourcesContent": ["import { Command } from 'commander';\nimport { printBanner } from '../banner';\n\ntype CommandEntry = { name: string; args?: string; desc: string; opts?: string[] };\ntype Group = { icon: string; title: string; commands: CommandEntry[]; examples: [string, string][] };\n\nconst c = {\n  reset:        '\\x1b[0m',\n  bold:         '\\x1b[1m',\n  dim:          '\\x1b[2m',\n  violet:       '\\x1b[38;5;99m',\n  purple:       '\\x1b[38;5;135m',\n  lavender:     '\\x1b[38;5;141m',\n  paleLavender: '\\x1b[38;5;183m',\n  gray:         '\\x1b[90m',\n  brown:        '\\x1b[38;5;130m',\n  green:        '\\x1b[32m',\n  cyan:         '\\x1b[36m',\n  underline:    '\\x1b[4m',\n};\n\nconst GROUPS: Group[] = [\n  {\n    icon: '\uD83D\uDD27', title: 'Setup',\n    commands: [\n      { name: 'install',       desc: 'Wire up MCP/instructions for an agent workspace', opts: ['--target <t>  kiro | cursor | claude | windsurf | ...'] },\n      { name: 'init',          args: '[path]', desc: 'Initialize KiroGraph in a project', opts: ['-i, --index  Index immediately after init'] },\n      { name: 'uninit',        args: '[path]', desc: 'Remove KiroGraph from a project',   opts: ['--force      Skip confirmation', '--target <t>  Target to clean up (or \"all\")'] },\n    ],\n    examples: [\n      ['kirograph install', 'Wire up Kiro MCP + hooks + steering'],\n      ['kirograph install --target cursor', 'Wire up Cursor MCP + rules + hooks'],\n      ['kirograph init --index', 'Init and immediately index'],\n    ],\n  },\n  {\n    icon: '\uD83D\uDCE6', title: 'Indexing',\n    commands: [\n      { name: 'index',         args: '[path]', desc: 'Full re-index of a project',             opts: ['--force     Force re-index all files'] },\n      { name: 'sync',          args: '[path]', desc: 'Incremental sync of changed files',       opts: ['--files <f> Specific files to sync'] },\n      { name: 'sync-if-dirty', args: '[path]', desc: 'Sync only if a dirty marker is present', opts: ['-q, --quiet  Suppress output'] },\n      { name: 'mark-dirty',    args: '[path]', desc: 'Write a dirty marker for deferred sync' },\n      { name: 'unlock',        args: '[path]', desc: 'Force-release a stale lock file' },\n    ],\n    examples: [\n      ['kirograph sync', 'Incremental sync of changed files'],\n      ['kirograph index --force', 'Force full re-index'],\n    ],\n  },\n  {\n    icon: '\uD83D\uDD0D', title: 'Search',\n    commands: [\n      { name: 'status',   args: '[path]',    desc: 'Show index statistics and health' },\n      { name: 'query',    args: '<search>',  desc: 'Search for symbols by name',          opts: ['--kind <k>   Filter by kind', '--limit <n>  Max results'] },\n      { name: 'context',  args: '<task>',    desc: 'Build relevant code context for a task', opts: ['--max-nodes <n>  Max symbols', '--no-code  Exclude code', '--format <f>  markdown | json'] },\n      { name: 'files',    args: '[path]',    desc: 'Show project file structure',          opts: ['--format <f>  tree | flat | grouped | compact', '--filter <p>  Directory prefix', '--pattern <g>  Glob'] },\n      { name: 'path',     args: '<from> <to>', desc: 'Shortest path between two symbols' },\n      { name: 'affected', args: '[files...]', desc: 'Find test files affected by changes', opts: ['--stdin  Read from stdin', '-d <n>  Depth', '-q  Quiet'] },\n    ],\n    examples: [\n      ['kirograph query useState', 'Find symbols named useState'],\n      ['kirograph context \"add dark mode\"', 'Get context for a task'],\n      ['kirograph path LoginController Pool', 'How are these connected?'],\n      ['git diff --name-only | kirograph affected --stdin', 'Affected tests from git diff'],\n    ],\n  },\n  {\n    icon: '\uD83D\uDCCA', title: 'Insights',\n    commands: [\n      { name: 'hotspots',   args: '[path]', desc: 'Most-connected symbols by edge degree',   opts: ['--limit <n>  Max results', '--format <f>  table | json'] },\n      { name: 'surprising', args: '[path]', desc: 'Non-obvious cross-file connections',      opts: ['--limit <n>  Max results'] },\n      { name: 'dead-code',  args: '[path]', desc: 'Unreferenced unexported symbols',         opts: ['--limit <n>  Max results'] },\n      { name: 'snapshot',   desc: 'Save/list/diff graph snapshots',                          opts: ['save [label]', 'list', 'diff [label]  --format summary|full|json'] },\n      { name: 'export',     desc: 'Interactive graph dashboard',                             opts: ['build [path]  Generate HTML', 'start [path]  Generate and open'] },\n    ],\n    examples: [\n      ['kirograph hotspots --limit 10', 'Top 10 most-connected symbols'],\n      ['kirograph snapshot save pre-refactor', 'Save before a refactor'],\n      ['kirograph snapshot diff pre-refactor', 'See what changed'],\n      ['kirograph export start', 'Open the graph dashboard'],\n    ],\n  },\n  {\n    icon: '\uD83C\uDFDB\uFE0F', title: 'Architecture',\n    commands: [\n      { name: 'architecture', args: '[path]', desc: 'Package graph and layer map',     opts: ['--packages  Packages only', '--layers  Layers only'] },\n      { name: 'coupling',     args: '[path]', desc: 'Coupling metrics per package',    opts: ['--sort <s>  instability | ca | ce | name', '--package <n>  Detail view'] },\n      { name: 'package',      args: '<name>', desc: 'Inspect a package',               opts: ['--no-files  Omit file list'] },\n    ],\n    examples: [\n      ['kirograph architecture --packages', 'List all detected packages'],\n      ['kirograph coupling --sort instability', 'Packages ranked by instability'],\n      ['kirograph package src/auth', 'Inspect the auth package'],\n    ],\n  },\n  {\n    icon: '\uD83E\uDDE0', title: 'Memory',\n    commands: [\n      { name: 'mem search',   args: '<query>', desc: 'Search past observations',       opts: ['--kind <k>  Filter by kind', '--limit <n>  Max results'] },\n      { name: 'mem store',    args: '<text>',  desc: 'Store an observation',           opts: ['--kind <k>  decision | error | pattern | architecture | note'] },\n      { name: 'mem timeline', desc: 'List recent sessions and observations' },\n      { name: 'mem status',   desc: 'Memory health dashboard' },\n      { name: 'mem prune',    desc: 'Remove old observations',                         opts: ['--older-than <d>  Duration (e.g. 90d)'] },\n      { name: 'mem export',   desc: 'Export observations',                             opts: ['--format <f>  jsonl | md'] },\n      { name: 'mem reembed',  desc: 'Re-embed after model change' },\n      { name: 'mem lint',     desc: 'Health check and auto-repair',                    opts: ['--fix  Auto-fix issues'] },\n    ],\n    examples: [\n      ['kirograph mem search \"auth decision\"', 'Search for past decisions'],\n      ['kirograph mem store \"use idempotency keys\" --kind decision', 'Store a decision'],\n      ['kirograph mem timeline', 'See recent sessions'],\n    ],\n  },\n  {\n    icon: '\uD83D\uDD12', title: 'Security',\n    commands: [\n      { name: 'security', args: '[path]', desc: 'Security overview: vulnerabilities, verdicts, stale-data warnings' },\n      { name: 'vulns',    args: '[path]', desc: 'List vulnerabilities with reachability verdicts and severity',\n        opts: [\n          '--severity <level>  Filter by severity: critical, high, medium, low',\n          '--verdict <verdict>  Filter by verdict: affected, not_affected, under_investigation',\n          '--refresh  Trigger fresh vulnerability enrichment before listing',\n          '--add <cveId>  Manually register a CVE (requires --package and --version)',\n        ],\n      },\n      { name: 'reachability', args: '<target>', desc: 'Check reachability for a CVE or dependency: verdict, call paths, impact' },\n      { name: 'vuln suppress',   args: '<cveId>', desc: 'Mark a CVE as suppressed (false positive or accepted risk)',\n        opts: [\n          '--reason <text>   Reason for suppression',\n          '--expires <date>  Expiry date (e.g. 2026-12-31)',\n        ],\n      },\n      { name: 'vuln unsuppress', args: '<cveId>', desc: 'Remove a suppression' },\n      { name: 'vuln suppressions', desc: 'List all active suppressions', opts: ['--format json  JSON output'] },\n      { name: 'licenses', args: '[path]', desc: 'Show dependency licenses and check against policy (deny/warn lists)',\n        opts: [\n          '--policy             Show only policy violations',\n          '--deny <patterns>    Override deny list (comma-separated SPDX patterns)',\n          '--warn <patterns>    Override warn list (comma-separated SPDX patterns)',\n          '--format json        JSON output',\n        ],\n      },\n      { name: 'vex',       args: '[path]', desc: 'Export a VEX document (Vulnerability Exploitability eXchange)', opts: ['--output <file>  Write to file instead of stdout'] },\n      { name: 'sbom',      args: '[path]', desc: 'Export a Software Bill of Materials',                           opts: ['--output <file>  Write to file instead of stdout'] },\n      { name: 'staleness', args: '[path]', desc: 'Check dependency freshness \u2014 packages behind their latest version',\n        opts: [\n          '--threshold <n>  Show only packages with staleness_score >= n (default: 0.3)',\n          '--refresh        Fetch latest version info from registries before listing',\n          '--format <fmt>   table | json',\n        ],\n      },\n      { name: 'security export',     args: '[path]', desc: 'Generate HTML security dashboard', opts: ['--output <file>  Output path', '--open  Open in browser'] },\n      { name: 'security secrets',    args: '[path]', desc: 'Scan for hardcoded secrets with call-graph blast radius', opts: ['--include-tests  Include test files', '--severity <s>  Filter level', '--format json'] },\n      { name: 'security flows',      args: '[path]', desc: 'SAST-lite: detect dangerous data flows (SQL injection, eval, path traversal, etc.)', opts: ['--type sql|eval|deserialize|path|all', '--format json'] },\n      { name: 'security ci-report',  args: '[path]', desc: 'Generate CI/CD security report (JSON, SARIF for GitHub, or text)', opts: ['--format json|sarif|text', '--fail-on affected|any|critical', '--output <file>'] },\n      { name: 'attack-surface',      args: '[path]', desc: 'Map attack surface: routes \u2192 vulnerable deps with hop count and auth status', opts: ['--limit <n>', '--public-only', '--format json'] },\n      { name: 'supply-chain',        args: '[path]', desc: 'Supply chain health: OpenSSF Scorecard, maintainer count, abandoned packages', opts: ['--threshold critical|high|medium', '--refresh', '--format json'] },\n      { name: 'dep-confusion',       args: '[path]', desc: 'Detect dependency confusion: internal packages that exist in public registries', opts: ['--format json'] },\n      { name: 'remediation',         args: '[path]', desc: 'Remediation SLA tracking: days open, fix available since, overdue alerts', opts: ['--overdue-only', '--format json'] },\n    ],\n    examples: [\n      ['kirograph security', 'Overview: dep count, vuln count, verdict breakdown'],\n      ['kirograph security --refresh-staleness', 'Overview including stale dependency count'],\n      ['kirograph vulns', 'List all vulnerabilities with severity and verdict'],\n      ['kirograph vulns --stale', 'Show staleness score alongside each CVE'],\n      ['kirograph vulns --verdict under_investigation', 'Show only vulnerabilities still being investigated'],\n      ['kirograph vulns --severity critical --verdict affected', 'Critical confirmed vulnerabilities'],\n      ['kirograph vulns --refresh', 'Re-query OSV before listing'],\n      ['kirograph staleness', 'Show packages with staleness_score >= 0.3'],\n      ['kirograph staleness --refresh --threshold 0.5', 'Fetch latest versions and show very stale packages'],\n      ['kirograph reachability CVE-2023-12345', 'Check reachability for a specific CVE'],\n      ['kirograph reachability lodash', 'Check reachability for a dependency by package name'],\n      ['kirograph licenses', 'Show all dependency licenses'],\n      ['kirograph licenses --policy', 'Show only license policy violations'],\n      ['kirograph licenses --deny \"GPL-*,AGPL-*\"', 'Block all GPL/AGPL licenses'],\n      ['kirograph vex --output vex.json', 'Export CycloneDX VEX document'],\n      ['kirograph sbom --output sbom.json', 'Export SPDX SBOM'],\n      ['kirograph security export --open', 'Generate and open HTML security dashboard'],\n      ['kirograph security secrets', 'Scan for hardcoded secrets with call-graph blast radius'],\n      ['kirograph security flows', 'Detect dangerous data flows (SQL injection, eval, etc.)'],\n      ['kirograph security ci-report --format sarif --output results.sarif', 'SARIF report for GitHub Security tab'],\n      ['kirograph attack-surface --public-only', 'Show public routes reaching vulnerable deps'],\n      ['kirograph supply-chain --threshold high', 'Show high-risk supply chain findings'],\n      ['kirograph dep-confusion', 'Detect dependency confusion attack vectors'],\n      ['kirograph remediation --overdue-only', 'Show CVEs past their remediation SLA'],\n      ['kirograph vuln suppress CVE-2024-1234 --reason \"not in code path\"', 'Suppress a false positive CVE'],\n      ['kirograph vuln unsuppress CVE-2024-1234', 'Remove a suppression'],\n      ['kirograph vuln suppressions', 'List all active suppressions'],\n    ],\n  },\n  {\n    icon: '\u2699\uFE0F', title: 'Agent',\n    commands: [\n      { name: 'caveman',     args: '[mode]',  desc: 'Communication style (off | lite | full | ultra)' },\n      { name: 'compression', args: '[level]', desc: 'Shell compression level (off | normal | aggressive | ultra)' },\n      { name: 'exec',        args: '<cmd>',   desc: 'Run command with token-optimized output', opts: ['-l <level>  Compression level', '-t <sec>  Timeout'] },\n      { name: 'gain',        desc: 'Token savings statistics',                                 opts: ['--graph  ASCII chart', '--history  Recent commands', '--daily  Day breakdown'] },\n      { name: 'serve',       desc: 'Start the MCP server',                                    opts: ['--mcp  Run as stdio MCP', '--path <p>  Project path'] },\n    ],\n    examples: [\n      ['kirograph caveman lite', 'Enable lite caveman mode'],\n      ['kirograph exec git status', 'Run git status with compression'],\n      ['kirograph gain --graph', 'Show token savings graph'],\n    ],\n  },\n];\n\nfunction renderGroup(group: Group, highlightIdx: number): string[] {\n  const lines: string[] = [];\n  const nameWidth = Math.max(...group.commands.map(cmd => (cmd.name + (cmd.args ? ' ' + cmd.args : '')).length)) + 2;\n\n  lines.push('');\n  lines.push(`  ${c.bold}${c.paleLavender}COMMANDS${c.reset}  ${c.dim}\u2191\u2193 select \u00B7 enter to copy \u00B7 q quit${c.reset}`);\n  lines.push('');\n\n  for (let i = 0; i < group.commands.length; i++) {\n    const cmd = group.commands[i]!;\n    const signature = cmd.name + (cmd.args ? ' ' + cmd.args : '');\n    const isHighlighted = i === highlightIdx;\n    const prefix = isHighlighted ? `${c.green}${c.bold}\u276F${c.reset} ` : '  ';\n    const namePart = isHighlighted\n      ? `${c.bold}${c.lavender}${cmd.name}${c.reset}${cmd.args ? ' ' + c.bold + cmd.args + c.reset : ''}`\n      : `${c.lavender}${cmd.name}${c.reset}${cmd.args ? ' ' + c.dim + cmd.args + c.reset : ''}`;\n    const pad = ' '.repeat(Math.max(0, nameWidth - signature.length));\n    lines.push(`${prefix}${namePart}${pad}${c.gray}${cmd.desc}${c.reset}`);\n    if (cmd.opts) {\n      for (const opt of cmd.opts) {\n        const [flag, ...rest] = opt.split(/  +/);\n        lines.push(`    ${c.purple}${flag}${c.reset}${rest.length ? '  ' + c.dim + rest.join('  ') + c.reset : ''}`);\n      }\n    }\n  }\n\n  if (group.examples.length > 0) {\n    lines.push('');\n    lines.push(`  ${c.bold}${c.paleLavender}EXAMPLES${c.reset}`);\n    lines.push('');\n    for (const [ex, desc] of group.examples) {\n      lines.push(`  ${c.violet}$${c.reset} ${c.lavender}${ex}${c.reset}`);\n      lines.push(`    ${c.dim}${desc}${c.reset}`);\n    }\n  }\n\n  return lines;\n}\n\nfunction renderTabs(selectedIdx: number): string {\n  return GROUPS.map((g, i) => {\n    if (i === selectedIdx) {\n      return `${c.bold}${c.violet}${c.underline}${g.icon} ${g.title}${c.reset}`;\n    }\n    return `${c.dim}${g.icon} ${g.title}${c.reset}`;\n  }).join('  ');\n}\n\n/**\n * Interactive tabbed help \u2014 left/right for tabs, up/down for commands, enter to copy.\n */\nexport function printInteractiveHelp(): void {\n  const CLEAR_LINE = '\\x1b[2K\\x1b[G';\n  let selectedTab = 0;\n  let selectedCmd = 0;\n  let prevLineCount = 0;\n\n  function render(first: boolean) {\n    if (!first && prevLineCount > 0) {\n      process.stdout.write(`\\x1b[${prevLineCount}A`);\n      for (let i = 0; i < prevLineCount; i++) {\n        process.stdout.write(`${CLEAR_LINE}\\n`);\n      }\n      process.stdout.write(`\\x1b[${prevLineCount}A`);\n    }\n\n    const lines: string[] = [];\n    lines.push('');\n    lines.push(`  ${renderTabs(selectedTab)}`);\n    lines.push(`  ${c.dim}\u2190 \u2192 tabs \u00B7 \u2191 \u2193 commands \u00B7 enter to use \u00B7 q quit${c.reset}`);\n    lines.push(...renderGroup(GROUPS[selectedTab]!, selectedCmd));\n    lines.push('');\n\n    for (const line of lines) {\n      process.stdout.write(`${CLEAR_LINE}${line}\\n`);\n    }\n    prevLineCount = lines.length;\n  }\n\n  printBanner();\n  console.log(`\\n${c.bold}${c.paleLavender}USAGE${c.reset}  ${c.lavender}kirograph${c.reset} ${c.gray}<command>${c.reset} ${c.dim}[options]${c.reset}`);\n\n  render(true);\n\n  // Enter raw mode for interactive navigation\n  const stdin = process.stdin;\n  if (!stdin.isTTY) {\n    // Non-interactive: just print all groups\n    for (let i = 1; i < GROUPS.length; i++) {\n      const lines = renderGroup(GROUPS[i]!, -1);\n      for (const line of lines) console.log(line);\n    }\n    return;\n  }\n\n  stdin.setRawMode(true);\n  stdin.resume();\n  stdin.setEncoding('utf8');\n\n  function cleanup() {\n    stdin.removeListener('data', onData);\n    stdin.setRawMode(false);\n    stdin.pause();\n  }\n\n  function onData(key: string) {\n    // Arrow keys and other escape sequences start with \\x1b[\n    if (key.startsWith('\\x1b[')) {\n      if (key === '\\x1b[C') { // right arrow \u2014 next tab\n        selectedTab = (selectedTab + 1) % GROUPS.length;\n        selectedCmd = 0;\n        render(false);\n      } else if (key === '\\x1b[D') { // left arrow \u2014 prev tab\n        selectedTab = (selectedTab - 1 + GROUPS.length) % GROUPS.length;\n        selectedCmd = 0;\n        render(false);\n      } else if (key === '\\x1b[B') { // down arrow \u2014 next command\n        const maxCmd = GROUPS[selectedTab]!.commands.length - 1;\n        selectedCmd = Math.min(selectedCmd + 1, maxCmd);\n        render(false);\n      } else if (key === '\\x1b[A') { // up arrow \u2014 prev command\n        selectedCmd = Math.max(selectedCmd - 1, 0);\n        render(false);\n      }\n      // Ignore other escape sequences\n      return;\n    }\n\n    if (key === '\\r' || key === '\\n') { // enter \u2014 copy command to terminal\n      cleanup();\n      const cmd = GROUPS[selectedTab]!.commands[selectedCmd]!;\n      const fullCmd = `kirograph ${cmd.name}${cmd.args ? ' ' + cmd.args : ''}`;\n      // Clear the interactive UI and print the command\n      process.stdout.write(`\\x1b[${prevLineCount}A`);\n      for (let i = 0; i < prevLineCount; i++) {\n        process.stdout.write(`${CLEAR_LINE}\\n`);\n      }\n      process.stdout.write(`\\x1b[${prevLineCount}A`);\n      console.log(`\\n  ${c.green}${c.bold}$${c.reset} ${fullCmd}\\n`);\n      process.exit(0);\n    } else if (key === 'q' || key === '\\x03') { // q, ctrl+c\n      cleanup();\n      console.log();\n      process.exit(0);\n    }\n  }\n\n  stdin.on('data', onData);\n}\n\n/**\n * Non-interactive full help (for piping, --help flag).\n */\nexport function printColoredHelp(): void {\n\n  console.log(`\\n${c.bold}${c.paleLavender}USAGE${c.reset}`);\n  console.log(`  ${c.lavender}kirograph${c.reset} ${c.gray}<command>${c.reset} ${c.dim}[options]${c.reset}\\n`);\n\n  for (const group of GROUPS) {\n    console.log(`${c.bold}${c.paleLavender}${group.icon} ${group.title.toUpperCase()}${c.reset}\\n`);\n    const nameWidth = Math.max(...group.commands.map(cmd => (cmd.name + (cmd.args ? ' ' + cmd.args : '')).length)) + 2;\n    for (const cmd of group.commands) {\n      const signature = cmd.name + (cmd.args ? ' ' + cmd.args : '');\n      const namePart = `${c.lavender}${cmd.name}${c.reset}${cmd.args ? ' ' + c.dim + cmd.args + c.reset : ''}`;\n      const pad = ' '.repeat(Math.max(0, nameWidth - signature.length));\n      console.log(`  ${namePart}${pad}${c.gray}${cmd.desc}${c.reset}`);\n      if (cmd.opts) {\n        for (const opt of cmd.opts) {\n          const [flag, ...rest] = opt.split(/  +/);\n          console.log(`    ${c.purple}${flag}${c.reset}${rest.length ? '  ' + c.dim + rest.join('  ') + c.reset : ''}`);\n        }\n      }\n    }\n    console.log();\n  }\n\n  console.log(`${c.bold}${c.paleLavender}GLOBAL FLAGS${c.reset}\\n`);\n  console.log(`  ${c.purple}-h, --help${c.reset}     ${c.gray}Show this help${c.reset}`);\n  console.log(`  ${c.purple}-V, --version${c.reset}  ${c.gray}Show version number${c.reset}\\n`);\n\n\n  console.log(`${c.bold}${c.paleLavender}EXAMPLES${c.reset}\\n`);\n\n  const exampleGroups: Array<{ title: string; examples: [string, string][] }> = [\n    {\n      title: '\uD83D\uDD27 Setup & indexing',\n      examples: [\n        ['kirograph install',                              'Wire up Kiro MCP + hooks + steering for the current workspace'],\n        ['kirograph install --target claude',              'Wire up Claude Code MCP + project memory'],\n        ['kirograph install --target codex',               'Install Codex project instructions and print MCP config'],\n        ['kirograph init --index',                         'Init and immediately index the project'],\n        ['kirograph sync',                                 'Incremental sync of changed files'],\n      ],\n    },\n    {\n      title: '\uD83D\uDD0D Search & exploration',\n      examples: [\n        ['kirograph query useState',                       'Find all symbols named useState'],\n        ['kirograph context \"add dark mode\"',              'Get relevant code context for a task'],\n        ['kirograph files --format grouped',               'Show files grouped by directory'],\n        ['kirograph path LoginController DatabasePool',     'Find how two symbols are connected'],\n        ['kirograph affected src/auth.ts',                 'Find tests affected by a change'],\n        ['git diff --name-only | kirograph affected --stdin', 'Affected tests from a git diff'],\n        ['kirograph export start',                         'Open the interactive graph dashboard in the browser'],\n        ['kirograph export build -o /tmp/graph',           'Export the dashboard to a custom directory'],\n      ],\n    },\n    {\n      title: '\uD83D\uDCCA Graph insights',\n      examples: [\n        ['kirograph hotspots --limit 10',                  'Top 10 most-connected symbols'],\n        ['kirograph surprising',                           'Find unexpected cross-module connections'],\n        ['kirograph dead-code',                            'Find unreferenced unexported symbols'],\n        ['kirograph snapshot save pre-refactor',           'Save a named snapshot before a refactor'],\n        ['kirograph snapshot diff pre-refactor',           'Diff current graph vs the named snapshot'],\n      ],\n    },\n    {\n      title: '\uD83C\uDFDB\uFE0F Architecture',\n      examples: [\n        ['kirograph architecture --packages',              'List all detected packages'],\n        ['kirograph coupling --sort instability',          'Show packages ranked by instability'],\n        ['kirograph package src/auth',                     'Inspect the auth package'],\n      ],\n    },\n    {\n      title: '\uD83D\uDD12 Security',\n      examples: [\n        ['kirograph security',                                        'Overview: dep count, vuln count, verdict breakdown'],\n        ['kirograph security --refresh-staleness',                   'Overview including stale dependency count'],\n        ['kirograph vulns',                                           'List all vulnerabilities'],\n        ['kirograph vulns --stale',                                   'Show staleness score alongside each CVE'],\n        ['kirograph vulns --verdict under_investigation',             'Vulnerabilities still being investigated'],\n        ['kirograph vulns --severity critical --verdict affected',    'Critical confirmed vulnerabilities'],\n        ['kirograph vulns --refresh',                                 'Re-query OSV then list'],\n        ['kirograph staleness',                                       'Show packages with staleness_score >= 0.3'],\n        ['kirograph staleness --refresh --threshold 0.5',            'Fetch latest versions and show very stale packages'],\n        ['kirograph reachability CVE-2023-12345',                     'Check reachability for a specific CVE'],\n        ['kirograph reachability lodash',                             'Check reachability for a dependency by package name'],\n        ['kirograph licenses',                                        'Show all dependency licenses'],\n        ['kirograph licenses --policy',                              'Show only license policy violations'],\n        ['kirograph licenses --deny \"GPL-*,AGPL-*\"',                 'Block all GPL/AGPL licenses'],\n        ['kirograph vex --output vex.json',                          'Export CycloneDX VEX document'],\n        ['kirograph sbom --output sbom.json',                        'Export SPDX SBOM'],\n        ['kirograph vuln suppress CVE-2024-1234 --reason \"not in code path\"', 'Suppress a false positive 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exec --raw cargo build',               'Show raw vs compressed comparison'],\n        ['kirograph gain --graph',                         'Show token savings graph'],\n        ['kirograph mem search \"auth decision\"',            'Search memory for past decisions'],\n        ['kirograph mem store \"use idempotency keys\" --kind decision', 'Store a decision'],\n        ['kirograph data list',                             'List all indexed datasets'],\n        ['kirograph data describe tests-fixtures-users',    'Show schema and column profiles'],\n        ['kirograph data query orders --filter status:eq:shipped --limit 10', 'Query rows with filters'],\n        ['kirograph data aggregate orders --group-by region --metric sum:amount', 'Server-side aggregation'],\n        ['kirograph serve --mcp',                          'Start the MCP server'],\n      ],\n    },\n  ];\n\n  for (const eg of exampleGroups) {\n    console.log(`  ${c.dim}${eg.title}${c.reset}`);\n    for (const [ex, desc] of eg.examples) {\n      console.log(`  ${c.violet}$${c.reset} ${c.lavender}${ex}${c.reset}`);\n      console.log(`    ${c.dim}${desc}${c.reset}`);\n    }\n    console.log();\n  }\n}\n\nexport function register(program: Command): void {\n  program.configureHelp({ formatHelp: () => '' });\n  program.addHelpText('afterAll', '');\n  // Disable Commander's built-in --help to prevent process.exit\n  program.helpOption(false);\n}\n"],
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+  "sourcesContent": ["import { Command } from 'commander';\nimport { printBanner } from '../banner';\n\ntype CommandEntry = { name: string; args?: string; desc: string; opts?: string[] };\ntype Group = { icon: string; title: string; commands: CommandEntry[]; examples: [string, string][] };\n\nconst c = {\n  reset:        '\\x1b[0m',\n  bold:         '\\x1b[1m',\n  dim:          '\\x1b[2m',\n  violet:       '\\x1b[38;5;99m',\n  purple:       '\\x1b[38;5;135m',\n  lavender:     '\\x1b[38;5;141m',\n  paleLavender: '\\x1b[38;5;183m',\n  gray:         '\\x1b[90m',\n  brown:        '\\x1b[38;5;130m',\n  green:        '\\x1b[32m',\n  cyan:         '\\x1b[36m',\n  underline:    '\\x1b[4m',\n};\n\nconst GROUPS: Group[] = [\n  {\n    icon: '\uD83D\uDD27', title: 'Setup',\n    commands: [\n      { name: 'install',       desc: 'Wire up MCP/instructions for an agent workspace', opts: ['--target <t>  kiro | cursor | claude | windsurf | ...'] },\n      { name: 'init',          args: '[path]', desc: 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--quiet  Suppress output'] },\n      { name: 'mark-dirty',    args: '[path]', desc: 'Write a dirty marker for deferred sync' },\n      { name: 'unlock',        args: '[path]', desc: 'Force-release a stale lock file' },\n    ],\n    examples: [\n      ['kirograph sync', 'Incremental sync of changed files'],\n      ['kirograph index --force', 'Force full re-index'],\n    ],\n  },\n  {\n    icon: '\uD83D\uDD0D', title: 'Search',\n    commands: [\n      { name: 'status',   args: '[path]',    desc: 'Show index statistics and health' },\n      { name: 'query',    args: '<search>',  desc: 'Search for symbols by name',          opts: ['--kind <k>   Filter by kind', '--limit <n>  Max results'] },\n      { name: 'context',  args: '<task>',    desc: 'Build relevant code context for a task', opts: ['--max-nodes <n>  Max symbols', '--no-code  Exclude code', '--format <f>  markdown | json'] },\n      { name: 'files',    args: '[path]',    desc: 'Show project file structure',          opts: ['--format <f>  tree | flat | grouped | compact', '--filter <p>  Directory prefix', '--pattern <g>  Glob'] },\n      { name: 'path',     args: '<from> <to>', desc: 'Shortest path between two symbols' },\n      { name: 'affected', args: '[files...]', desc: 'Find test files affected by changes', opts: ['--stdin  Read from stdin', '-d <n>  Depth', '-q  Quiet'] },\n    ],\n    examples: [\n      ['kirograph query useState', 'Find symbols named useState'],\n      ['kirograph context \"add dark mode\"', 'Get context for a task'],\n      ['kirograph path LoginController Pool', 'How are these connected?'],\n      ['git diff --name-only | kirograph affected --stdin', 'Affected tests from git diff'],\n    ],\n  },\n  {\n    icon: '\uD83D\uDCCA', title: 'Insights',\n    commands: [\n      { name: 'hotspots',   args: '[path]', desc: 'Most-connected symbols by edge degree',   opts: ['--limit <n>  Max results', '--format <f>  table | json'] },\n      { name: 'surprising', args: '[path]', desc: 'Non-obvious cross-file connections',      opts: ['--limit <n>  Max results'] },\n      { name: 'dead-code',  args: '[path]', desc: 'Unreferenced unexported symbols',         opts: ['--limit <n>  Max results'] },\n      { name: 'snapshot',   desc: 'Save/list/diff graph snapshots',                          opts: ['save [label]', 'list', 'diff [label]  --format summary|full|json'] },\n      { name: 'export',     desc: 'Interactive graph dashboard',                             opts: ['build [path]  Generate HTML', 'start [path]  Generate and open'] },\n    ],\n    examples: [\n      ['kirograph hotspots --limit 10', 'Top 10 most-connected symbols'],\n      ['kirograph snapshot save pre-refactor', 'Save before a refactor'],\n      ['kirograph snapshot diff pre-refactor', 'See what changed'],\n      ['kirograph export start', 'Open the graph dashboard'],\n    ],\n  },\n  {\n    icon: '\uD83C\uDFDB\uFE0F', title: 'Architecture',\n    commands: [\n      { name: 'architecture', args: '[path]', desc: 'Package graph and layer map',     opts: ['--packages  Packages only', '--layers  Layers only'] },\n      { name: 'coupling',     args: '[path]', desc: 'Coupling metrics per package',    opts: ['--sort <s>  instability | ca | ce | name', '--package <n>  Detail view'] },\n      { name: 'package',      args: '<name>', desc: 'Inspect a package',               opts: ['--no-files  Omit file list'] },\n    ],\n    examples: [\n      ['kirograph architecture --packages', 'List all detected packages'],\n      ['kirograph coupling --sort instability', 'Packages ranked by instability'],\n      ['kirograph package src/auth', 'Inspect the auth package'],\n    ],\n  },\n  {\n    icon: '\uD83E\uDDE0', title: 'Memory',\n    commands: [\n      { name: 'mem search',   args: '<query>', desc: 'Search past observations',       opts: ['--kind <k>  Filter by kind', '--limit <n>  Max results'] },\n      { name: 'mem store',    args: '<text>',  desc: 'Store an observation',           opts: ['--kind <k>  decision | error | pattern | architecture | note'] },\n      { name: 'mem timeline', desc: 'List recent sessions and observations' },\n      { name: 'mem status',   desc: 'Memory health dashboard' },\n      { name: 'mem prune',    desc: 'Remove old observations',                         opts: ['--older-than <d>  Duration (e.g. 90d)'] },\n      { name: 'mem export',   desc: 'Export observations',                             opts: ['--format <f>  jsonl | md'] },\n      { name: 'mem reembed',  desc: 'Re-embed after model change' },\n      { name: 'mem lint',     desc: 'Health check and auto-repair',                    opts: ['--fix  Auto-fix issues'] },\n    ],\n    examples: [\n      ['kirograph mem search \"auth decision\"', 'Search for past decisions'],\n      ['kirograph mem store \"use idempotency keys\" --kind decision', 'Store a decision'],\n      ['kirograph mem timeline', 'See recent sessions'],\n    ],\n  },\n  {\n    icon: '\uD83D\uDD12', title: 'Security',\n    commands: [\n      { name: 'security', args: '[path]', desc: 'Security overview: vulnerabilities, verdicts, stale-data warnings' },\n      { name: 'vulns',    args: '[path]', desc: 'List vulnerabilities with reachability verdicts and severity',\n        opts: [\n          '--severity <level>  Filter by severity: critical, high, medium, low',\n          '--verdict <verdict>  Filter by verdict: affected, not_affected, under_investigation',\n          '--refresh  Trigger fresh vulnerability enrichment before listing',\n          '--add <cveId>  Manually register a CVE (requires --package and --version)',\n        ],\n      },\n      { name: 'reachability', args: '<target>', desc: 'Check reachability for a CVE or dependency: verdict, call paths, impact' },\n      { name: 'vuln suppress',   args: '<cveId>', desc: 'Mark a CVE as suppressed (false positive or accepted risk)',\n        opts: [\n          '--reason <text>   Reason for suppression',\n          '--expires <date>  Expiry date (e.g. 2026-12-31)',\n        ],\n      },\n      { name: 'vuln unsuppress', args: '<cveId>', desc: 'Remove a suppression' },\n      { name: 'vuln suppressions', desc: 'List all active suppressions', opts: ['--format json  JSON output'] },\n      { name: 'licenses', args: '[path]', desc: 'Show dependency licenses and check against policy (deny/warn lists)',\n        opts: [\n          '--policy             Show only policy violations',\n          '--deny <patterns>    Override deny list (comma-separated SPDX patterns)',\n          '--warn <patterns>    Override warn list (comma-separated SPDX patterns)',\n          '--format json        JSON output',\n        ],\n      },\n      { name: 'vex',       args: '[path]', desc: 'Export a VEX document (Vulnerability Exploitability eXchange)', opts: ['--output <file>  Write to file instead of stdout'] },\n      { name: 'sbom',      args: '[path]', desc: 'Export a Software Bill of Materials',                           opts: ['--output <file>  Write to file instead of stdout'] },\n      { name: 'staleness', args: '[path]', desc: 'Check dependency freshness \u2014 packages behind their latest version',\n        opts: [\n          '--threshold <n>  Show only packages with staleness_score >= n (default: 0.3)',\n          '--refresh        Fetch latest version info from registries before listing',\n          '--format <fmt>   table | json',\n        ],\n      },\n      { name: 'security export',     args: '[path]', desc: 'Generate HTML security dashboard', opts: ['--output <file>  Output path', '--open  Open in browser'] },\n      { name: 'security secrets',    args: '[path]', desc: 'Scan for hardcoded secrets with call-graph blast radius', opts: ['--include-tests  Include test files', '--severity <s>  Filter level', '--format json'] },\n      { name: 'security flows',      args: '[path]', desc: 'SAST-lite: detect dangerous data flows (SQL injection, eval, path traversal, etc.)', opts: ['--type sql|eval|deserialize|path|all', '--format json'] },\n      { name: 'security ci-report',  args: '[path]', desc: 'Generate CI/CD security report (JSON, SARIF for GitHub, or text)', opts: ['--format json|sarif|text', '--fail-on affected|any|critical', '--output <file>'] },\n      { name: 'attack-surface',      args: '[path]', desc: 'Map attack surface: routes \u2192 vulnerable deps with hop count and auth status', opts: ['--limit <n>', '--public-only', '--format json'] },\n      { name: 'supply-chain',        args: '[path]', desc: 'Supply chain health: OpenSSF Scorecard, maintainer count, abandoned packages', opts: ['--threshold critical|high|medium', '--refresh', '--format json'] },\n      { name: 'dep-confusion',       args: '[path]', desc: 'Detect dependency confusion: internal packages that exist in public registries', opts: ['--format json'] },\n      { name: 'remediation',         args: '[path]', desc: 'Remediation SLA tracking: days open, fix available since, overdue alerts', opts: ['--overdue-only', '--format json'] },\n      { name: 'pattern', args: '[pattern]', desc: 'AST structural search: live pattern search or library rule runner',\n        opts: [\n          '--list             Show all bundled SAST rules',\n          '--library <id>    Run a specific library rule',\n          '--lang <l>        Language filter (js, ts, python, go, ...)',\n          '--format json     JSON output',\n        ],\n      },\n    ],\n    examples: [\n      ['kirograph security', 'Overview: dep count, vuln count, verdict breakdown'],\n      ['kirograph security --refresh-staleness', 'Overview including stale dependency count'],\n      ['kirograph vulns', 'List all vulnerabilities with severity and verdict'],\n      ['kirograph vulns --stale', 'Show staleness score alongside each CVE'],\n      ['kirograph vulns --verdict under_investigation', 'Show only vulnerabilities still being investigated'],\n      ['kirograph vulns --severity critical --verdict affected', 'Critical confirmed vulnerabilities'],\n      ['kirograph vulns --refresh', 'Re-query OSV before listing'],\n      ['kirograph staleness', 'Show packages with staleness_score >= 0.3'],\n      ['kirograph staleness --refresh --threshold 0.5', 'Fetch latest versions and show very stale packages'],\n      ['kirograph reachability CVE-2023-12345', 'Check reachability for a specific CVE'],\n      ['kirograph reachability lodash', 'Check reachability for a dependency by package name'],\n      ['kirograph licenses', 'Show all dependency licenses'],\n      ['kirograph licenses --policy', 'Show only license policy violations'],\n      ['kirograph licenses --deny \"GPL-*,AGPL-*\"', 'Block all GPL/AGPL licenses'],\n      ['kirograph vex --output vex.json', 'Export CycloneDX VEX document'],\n      ['kirograph sbom --output sbom.json', 'Export SPDX SBOM'],\n      ['kirograph security export --open', 'Generate and open HTML security dashboard'],\n      ['kirograph security secrets', 'Scan for hardcoded secrets with call-graph blast radius'],\n      ['kirograph security flows', 'Detect dangerous data flows (SQL injection, eval, etc.)'],\n      ['kirograph security ci-report --format sarif --output results.sarif', 'SARIF report for GitHub Security tab'],\n      ['kirograph attack-surface --public-only', 'Show public routes reaching vulnerable deps'],\n      ['kirograph supply-chain --threshold high', 'Show high-risk supply chain findings'],\n      ['kirograph dep-confusion', 'Detect dependency confusion attack vectors'],\n      ['kirograph remediation --overdue-only', 'Show CVEs past their remediation SLA'],\n      ['kirograph vuln suppress CVE-2024-1234 --reason \"not in code path\"', 'Suppress a false positive CVE'],\n      ['kirograph vuln unsuppress CVE-2024-1234', 'Remove a suppression'],\n      ['kirograph vuln suppressions', 'List all active suppressions'],\n      ['kirograph pattern \"eval($X)\"', 'Find all eval() calls'],\n      ['kirograph pattern --list', 'Show all bundled SAST rules'],\n      ['kirograph pattern --library dangerous-eval-js', 'Run the dangerous-eval library rule'],\n    ],\n  },\n  {\n    icon: '\u2699\uFE0F', title: 'Agent',\n    commands: [\n      { name: 'caveman',     args: '[mode]',  desc: 'Communication style (off | lite | full | ultra)' },\n      { name: 'compression', args: '[level]', desc: 'Shell compression level (off | normal | aggressive | ultra)' },\n      { name: 'exec',        args: '<cmd>',   desc: 'Run command with token-optimized output', opts: ['-l <level>  Compression level', '-t <sec>  Timeout'] },\n      { name: 'gain',        desc: 'Token savings statistics',                                 opts: ['--graph  ASCII chart', '--history  Recent commands', '--daily  Day breakdown'] },\n      { name: 'serve',       desc: 'Start the MCP server',                                    opts: ['--mcp  Run as stdio MCP', '--path <p>  Project path'] },\n    ],\n    examples: [\n      ['kirograph caveman lite', 'Enable lite caveman mode'],\n      ['kirograph exec git status', 'Run git status with compression'],\n      ['kirograph gain --graph', 'Show token savings graph'],\n    ],\n  },\n];\n\nfunction renderGroup(group: Group, highlightIdx: number): string[] {\n  const lines: string[] = [];\n  const nameWidth = Math.max(...group.commands.map(cmd => (cmd.name + (cmd.args ? ' ' + cmd.args : '')).length)) + 2;\n\n  lines.push('');\n  lines.push(`  ${c.bold}${c.paleLavender}COMMANDS${c.reset}  ${c.dim}\u2191\u2193 select \u00B7 enter to copy \u00B7 q quit${c.reset}`);\n  lines.push('');\n\n  for (let i = 0; i < group.commands.length; i++) {\n    const cmd = group.commands[i]!;\n    const signature = cmd.name + (cmd.args ? ' ' + cmd.args : '');\n    const isHighlighted = i === highlightIdx;\n    const prefix = isHighlighted ? `${c.green}${c.bold}\u276F${c.reset} ` : '  ';\n    const namePart = isHighlighted\n      ? `${c.bold}${c.lavender}${cmd.name}${c.reset}${cmd.args ? ' ' + c.bold + cmd.args + c.reset : ''}`\n      : `${c.lavender}${cmd.name}${c.reset}${cmd.args ? ' ' + c.dim + cmd.args + c.reset : ''}`;\n    const pad = ' '.repeat(Math.max(0, nameWidth - signature.length));\n    lines.push(`${prefix}${namePart}${pad}${c.gray}${cmd.desc}${c.reset}`);\n    if (cmd.opts) {\n      for (const opt of cmd.opts) {\n        const [flag, ...rest] = opt.split(/  +/);\n        lines.push(`    ${c.purple}${flag}${c.reset}${rest.length ? '  ' + c.dim + rest.join('  ') + c.reset : ''}`);\n      }\n    }\n  }\n\n  if (group.examples.length > 0) {\n    lines.push('');\n    lines.push(`  ${c.bold}${c.paleLavender}EXAMPLES${c.reset}`);\n    lines.push('');\n    for (const [ex, desc] of group.examples) {\n      lines.push(`  ${c.violet}$${c.reset} ${c.lavender}${ex}${c.reset}`);\n      lines.push(`    ${c.dim}${desc}${c.reset}`);\n    }\n  }\n\n  return lines;\n}\n\nfunction renderTabs(selectedIdx: number): string {\n  return GROUPS.map((g, i) => {\n    if (i === selectedIdx) {\n      return `${c.bold}${c.violet}${c.underline}${g.icon} ${g.title}${c.reset}`;\n    }\n    return `${c.dim}${g.icon} ${g.title}${c.reset}`;\n  }).join('  ');\n}\n\n/**\n * Interactive tabbed help \u2014 left/right for tabs, up/down for commands, enter to copy.\n */\nexport function printInteractiveHelp(): void {\n  const CLEAR_LINE = '\\x1b[2K\\x1b[G';\n  let selectedTab = 0;\n  let selectedCmd = 0;\n  let prevLineCount = 0;\n\n  function render(first: boolean) {\n    if (!first && prevLineCount > 0) {\n      process.stdout.write(`\\x1b[${prevLineCount}A`);\n      for (let i = 0; i < prevLineCount; i++) {\n        process.stdout.write(`${CLEAR_LINE}\\n`);\n      }\n      process.stdout.write(`\\x1b[${prevLineCount}A`);\n    }\n\n    const lines: string[] = [];\n    lines.push('');\n    lines.push(`  ${renderTabs(selectedTab)}`);\n    lines.push(`  ${c.dim}\u2190 \u2192 tabs \u00B7 \u2191 \u2193 commands \u00B7 enter to use \u00B7 q quit${c.reset}`);\n    lines.push(...renderGroup(GROUPS[selectedTab]!, selectedCmd));\n    lines.push('');\n\n    for (const line of lines) {\n      process.stdout.write(`${CLEAR_LINE}${line}\\n`);\n    }\n    prevLineCount = lines.length;\n  }\n\n  printBanner();\n  console.log(`\\n${c.bold}${c.paleLavender}USAGE${c.reset}  ${c.lavender}kirograph${c.reset} ${c.gray}<command>${c.reset} ${c.dim}[options]${c.reset}`);\n\n  render(true);\n\n  // Enter raw mode for interactive navigation\n  const stdin = process.stdin;\n  if (!stdin.isTTY) {\n    // Non-interactive: just print all groups\n    for (let i = 1; i < GROUPS.length; i++) {\n      const lines = renderGroup(GROUPS[i]!, -1);\n      for (const line of lines) console.log(line);\n    }\n    return;\n  }\n\n  stdin.setRawMode(true);\n  stdin.resume();\n  stdin.setEncoding('utf8');\n\n  function cleanup() {\n    stdin.removeListener('data', onData);\n    stdin.setRawMode(false);\n    stdin.pause();\n  }\n\n  function onData(key: string) {\n    // Arrow keys and other escape sequences start with \\x1b[\n    if (key.startsWith('\\x1b[')) {\n      if (key === '\\x1b[C') { // right arrow \u2014 next tab\n        selectedTab = (selectedTab + 1) % GROUPS.length;\n        selectedCmd = 0;\n        render(false);\n      } else if (key === '\\x1b[D') { // left arrow \u2014 prev tab\n        selectedTab = (selectedTab - 1 + GROUPS.length) % GROUPS.length;\n        selectedCmd = 0;\n        render(false);\n      } else if (key === '\\x1b[B') { // down arrow \u2014 next command\n        const maxCmd = GROUPS[selectedTab]!.commands.length - 1;\n        selectedCmd = Math.min(selectedCmd + 1, maxCmd);\n        render(false);\n      } else if (key === '\\x1b[A') { // up arrow \u2014 prev command\n        selectedCmd = Math.max(selectedCmd - 1, 0);\n        render(false);\n      }\n      // Ignore other escape sequences\n      return;\n    }\n\n    if (key === '\\r' || key === '\\n') { // enter \u2014 copy command to terminal\n      cleanup();\n      const cmd = GROUPS[selectedTab]!.commands[selectedCmd]!;\n      const fullCmd = `kirograph ${cmd.name}${cmd.args ? ' ' + cmd.args : ''}`;\n      // Clear the interactive UI and print the command\n      process.stdout.write(`\\x1b[${prevLineCount}A`);\n      for (let i = 0; i < prevLineCount; i++) {\n        process.stdout.write(`${CLEAR_LINE}\\n`);\n      }\n      process.stdout.write(`\\x1b[${prevLineCount}A`);\n      console.log(`\\n  ${c.green}${c.bold}$${c.reset} ${fullCmd}\\n`);\n      process.exit(0);\n    } else if (key === 'q' || key === '\\x03') { // q, ctrl+c\n      cleanup();\n      console.log();\n      process.exit(0);\n    }\n  }\n\n  stdin.on('data', onData);\n}\n\n/**\n * Non-interactive full help (for piping, --help flag).\n */\nexport function printColoredHelp(): void {\n\n  console.log(`\\n${c.bold}${c.paleLavender}USAGE${c.reset}`);\n  console.log(`  ${c.lavender}kirograph${c.reset} ${c.gray}<command>${c.reset} ${c.dim}[options]${c.reset}\\n`);\n\n  for (const group of GROUPS) {\n    console.log(`${c.bold}${c.paleLavender}${group.icon} ${group.title.toUpperCase()}${c.reset}\\n`);\n    const nameWidth = Math.max(...group.commands.map(cmd => (cmd.name + (cmd.args ? ' ' + cmd.args : '')).length)) + 2;\n    for (const cmd of group.commands) {\n      const signature = cmd.name + (cmd.args ? ' ' + cmd.args : '');\n      const namePart = `${c.lavender}${cmd.name}${c.reset}${cmd.args ? ' ' + c.dim + cmd.args + c.reset : ''}`;\n      const pad = ' '.repeat(Math.max(0, nameWidth - signature.length));\n      console.log(`  ${namePart}${pad}${c.gray}${cmd.desc}${c.reset}`);\n      if (cmd.opts) {\n        for (const opt of cmd.opts) {\n          const [flag, ...rest] = opt.split(/  +/);\n          console.log(`    ${c.purple}${flag}${c.reset}${rest.length ? '  ' + c.dim + rest.join('  ') + c.reset : ''}`);\n        }\n      }\n    }\n    console.log();\n  }\n\n  console.log(`${c.bold}${c.paleLavender}GLOBAL FLAGS${c.reset}\\n`);\n  console.log(`  ${c.purple}-h, --help${c.reset}     ${c.gray}Show this help${c.reset}`);\n  console.log(`  ${c.purple}-V, --version${c.reset}  ${c.gray}Show version number${c.reset}\\n`);\n\n\n  console.log(`${c.bold}${c.paleLavender}EXAMPLES${c.reset}\\n`);\n\n  const exampleGroups: Array<{ title: string; examples: [string, string][] }> = [\n    {\n      title: '\uD83D\uDD27 Setup & indexing',\n      examples: [\n        ['kirograph install',                              'Wire up Kiro MCP + hooks + steering for the current workspace'],\n        ['kirograph install --target claude',              'Wire up Claude Code MCP + project memory'],\n        ['kirograph install --target codex',               'Install Codex project instructions and print MCP config'],\n        ['kirograph init --index',                         'Init and immediately index the project'],\n        ['kirograph sync',                                 'Incremental sync of changed files'],\n      ],\n    },\n    {\n      title: '\uD83D\uDD0D Search & exploration',\n      examples: [\n        ['kirograph query useState',                       'Find all symbols named useState'],\n        ['kirograph context \"add dark mode\"',              'Get relevant code context for a task'],\n        ['kirograph files --format grouped',               'Show files grouped by directory'],\n        ['kirograph path LoginController DatabasePool',     'Find how two symbols are connected'],\n        ['kirograph affected src/auth.ts',                 'Find tests affected by a change'],\n        ['git diff --name-only | kirograph affected --stdin', 'Affected tests from a git diff'],\n        ['kirograph export start',                         'Open the interactive graph dashboard in the browser'],\n        ['kirograph export build -o /tmp/graph',           'Export the dashboard to a custom directory'],\n      ],\n    },\n    {\n      title: '\uD83D\uDCCA Graph insights',\n      examples: [\n        ['kirograph hotspots --limit 10',                  'Top 10 most-connected symbols'],\n        ['kirograph surprising',                           'Find unexpected cross-module connections'],\n        ['kirograph dead-code',                            'Find unreferenced unexported symbols'],\n        ['kirograph snapshot save pre-refactor',           'Save a named snapshot before a refactor'],\n        ['kirograph snapshot diff pre-refactor',           'Diff current graph vs the named snapshot'],\n      ],\n    },\n    {\n      title: '\uD83C\uDFDB\uFE0F Architecture',\n      examples: [\n        ['kirograph architecture --packages',              'List all detected packages'],\n        ['kirograph coupling --sort instability',          'Show packages ranked by instability'],\n        ['kirograph package src/auth',                     'Inspect the auth package'],\n      ],\n    },\n    {\n      title: '\uD83D\uDD12 Security',\n      examples: [\n        ['kirograph security',                                        'Overview: dep count, vuln count, verdict breakdown'],\n        ['kirograph security --refresh-staleness',                   'Overview including stale dependency count'],\n        ['kirograph vulns',                                           'List all vulnerabilities'],\n        ['kirograph vulns --stale',                                   'Show staleness score alongside each CVE'],\n        ['kirograph vulns --verdict under_investigation',             'Vulnerabilities still being investigated'],\n        ['kirograph vulns --severity critical --verdict affected',    'Critical confirmed vulnerabilities'],\n        ['kirograph vulns --refresh',                                 'Re-query OSV then list'],\n        ['kirograph staleness',                                       'Show packages with staleness_score >= 0.3'],\n        ['kirograph staleness --refresh --threshold 0.5',            'Fetch latest versions and show very stale packages'],\n        ['kirograph reachability CVE-2023-12345',                     'Check reachability for a specific CVE'],\n        ['kirograph reachability lodash',                             'Check reachability for a dependency by package name'],\n        ['kirograph licenses',                                        'Show all dependency licenses'],\n        ['kirograph licenses --policy',                              'Show only license policy violations'],\n        ['kirograph licenses --deny \"GPL-*,AGPL-*\"',                 'Block all GPL/AGPL licenses'],\n        ['kirograph vex --output vex.json',                          'Export CycloneDX VEX document'],\n        ['kirograph sbom --output sbom.json',                        'Export SPDX SBOM'],\n        ['kirograph vuln suppress CVE-2024-1234 --reason \"not in code path\"', 'Suppress a false positive CVE'],\n        ['kirograph vuln suppress CVE-2024-1234 --expires 2026-12-31', 'Suppress with expiry date'],\n        ['kirograph vuln unsuppress CVE-2024-1234',                  'Remove a suppression'],\n        ['kirograph vuln suppressions',                              'List all active suppressions'],\n        ['kirograph pattern \"eval($X)\"',                             'Find all eval() calls (requires enablePatterns: true)'],\n        ['kirograph pattern --list',                                 'Show all bundled SAST pattern rules'],\n        ['kirograph pattern --library dangerous-eval-js',            'Run a specific library rule'],\n      ],\n    },\n    {\n      title: '\u2699\uFE0F Agent',\n      examples: [\n        ['kirograph caveman full',                         'Enable full caveman mode for the agent'],\n        ['kirograph caveman off',                          'Disable caveman mode'],\n        ['kirograph compression aggressive',              'Set compression to aggressive level'],\n        ['kirograph compression off',                      'Disable compression hook (tool still available)'],\n        ['kirograph exec git status',                      'Run git status with compression'],\n        ['kirograph exec --level ultra npm test',          'Run tests with ultra compression'],\n        ['kirograph exec --raw cargo build',               'Show raw vs compressed comparison'],\n        ['kirograph gain --graph',                         'Show token savings graph'],\n        ['kirograph mem search \"auth decision\"',            'Search memory for past decisions'],\n        ['kirograph mem store \"use idempotency keys\" --kind decision', 'Store a decision'],\n        ['kirograph data list',                             'List all indexed datasets'],\n        ['kirograph data describe tests-fixtures-users',    'Show schema and column profiles'],\n        ['kirograph data query orders --filter status:eq:shipped --limit 10', 'Query rows with filters'],\n        ['kirograph data aggregate orders --group-by region --metric sum:amount', 'Server-side aggregation'],\n        ['kirograph serve --mcp',                          'Start the MCP server'],\n      ],\n    },\n  ];\n\n  for (const eg of exampleGroups) {\n    console.log(`  ${c.dim}${eg.title}${c.reset}`);\n    for (const [ex, desc] of eg.examples) {\n      console.log(`  ${c.violet}$${c.reset} ${c.lavender}${ex}${c.reset}`);\n      console.log(`    ${c.dim}${desc}${c.reset}`);\n    }\n    console.log();\n  }\n}\n\nexport function register(program: Command): void {\n  program.configureHelp({ formatHelp: () => '' });\n  program.addHelpText('afterAll', '');\n  // Disable Commander's built-in --help to prevent process.exit\n  program.helpOption(false);\n}\n"],
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   "names": []
 }

package/dist/bin/commands/hotspots.d.ts

@@ -0,0 +1,3 @@
+import { Command } from 'commander';
+export declare function register(program: Command): void;
+//# sourceMappingURL=hotspots.d.ts.map

package/dist/bin/commands/hotspots.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"hotspots.d.ts","sourceRoot":"","sources":["../../../src/bin/commands/hotspots.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAMpC,wBAAgB,QAAQ,CAAC,OAAO,EAAE,OAAO,GAAG,IAAI,CA6J/C"}

package/dist/bin/commands/hotspots.js

@@ -33,12 +33,105 @@ __export(hotspots_exports, {
 module.exports = __toCommonJS(hotspots_exports);
 var path = __toESM(require("path"));
 var import_ui = require("../ui");
+var import_config = require("../../config");
+const SEVERITY_RANK = { critical: 4, high: 3, medium: 2, low: 1 };
 function register(program) {
-  program.command("hotspots [projectPath]").description("Find the most-connected symbols by edge degree").option("--limit <n>", "Max results (default: 20)", "20").option("--format <fmt>", "Output format: table | json", "table").action(async (projectPath, opts) => {
+  program.command("hotspots [projectPath]").description("Find the most-connected symbols by edge degree").option("--limit <n>", "Max results (default: 20)", "20").option("--format <fmt>", "Output format: table | json", "table").option("--security", "Show only symbols with pattern matches, sorted by severity \xD7 caller count").action(async (projectPath, opts) => {
     const KiroGraph = (await Promise.resolve().then(() => require("../../index.js"))).default;
     const target = path.resolve(projectPath ?? process.cwd());
     const cg = await KiroGraph.open(target);
     const limit = Math.max(1, Math.min(100, parseInt(opts.limit) || 20));
+    if (opts.security) {
+      try {
+        const config = await (0, import_config.loadConfig)(target);
+        if (!config.enablePatterns) {
+          console.error(`
+  kirograph hotspots --security requires enablePatterns: true and kirograph index to have been run.
+`);
+          cg.close();
+          process.exit(1);
+        }
+        const db = cg.getDatabase();
+        db.applyPatternsSchema?.();
+        const rawDb = db.getRawDb();
+        const tableExists = rawDb.get("SELECT name FROM sqlite_master WHERE type='table' AND name='pattern_matches'");
+        if (!tableExists) {
+          console.error(`
+  kirograph hotspots --security requires enablePatterns: true and kirograph index to have been run.
+`);
+          cg.close();
+          process.exit(1);
+        }
+        const patternSymbols = rawDb.all(`
+              SELECT
+                pm.symbol_node_id,
+                pm.file_path,
+                pm.start_line,
+                pm.pattern_id,
+                CASE MAX(CASE pm.severity WHEN 'critical' THEN 4 WHEN 'high' THEN 3 WHEN 'medium' THEN 2 WHEN 'low' THEN 1 ELSE 0 END)
+                  WHEN 4 THEN 'critical' WHEN 3 THEN 'high' WHEN 2 THEN 'medium' WHEN 1 THEN 'low' ELSE 'unknown'
+                END as worst_severity,
+                COUNT(*) as match_count
+              FROM pattern_matches pm
+              GROUP BY pm.symbol_node_id
+            `);
+        if (patternSymbols.length === 0) {
+          console.log(`
+  ${import_ui.dim}No pattern matches found. Run kirograph index to populate pattern data.${import_ui.reset}
+`);
+          cg.close();
+          return;
+        }
+        const hotspots2 = cg.findHotspots(1e3);
+        cg.close();
+        const hotspotMap = new Map(hotspots2.map((h) => [h.id ?? `${h.filePath}:${h.startLine}:${h.name}`, h]));
+        const secHotspots = patternSymbols.map((ps) => {
+          const h = hotspotMap.get(ps.symbol_node_id);
+          const callerCount = h?.inDegree ?? 0;
+          const calledCount = h?.outDegree ?? 0;
+          const sevRank = SEVERITY_RANK[ps.worst_severity] ?? 1;
+          return {
+            name: h?.name ?? path.basename(ps.file_path),
+            filePath: ps.file_path,
+            startLine: ps.start_line,
+            worstSeverity: ps.worst_severity,
+            patternId: ps.pattern_id,
+            matchCount: ps.match_count,
+            callerCount,
+            calledCount,
+            score: sevRank * Math.max(1, callerCount)
+          };
+        });
+        secHotspots.sort((a, b) => b.score - a.score);
+        const results = secHotspots.slice(0, limit);
+        if (opts.format === "json") {
+          console.log(JSON.stringify(results, null, 2));
+          return;
+        }
+        console.log();
+        console.log(`  ${import_ui.violet}${import_ui.bold}Security Hotspots${import_ui.reset}  ${import_ui.dim}(symbols with pattern matches)${import_ui.reset}
+`);
+        const severityColor = (sev) => {
+          if (sev === "critical") return "\x1B[31m";
+          if (sev === "high") return "\x1B[33m";
+          if (sev === "medium") return "\x1B[36m";
+          return import_ui.dim;
+        };
+        for (const r of results) {
+          const sevColor = severityColor(r.worstSeverity);
+          const sevTag = `[${r.worstSeverity.toUpperCase()}]`.padEnd(10);
+          console.log(`  ${import_ui.dim}${r.filePath}:${r.startLine}${import_ui.reset}   ${import_ui.violet}${import_ui.bold}${r.name}${import_ui.reset}`);
+          console.log(`    ${sevColor}\u25CF ${sevTag}${import_ui.reset} ${import_ui.dim}${r.patternId}${import_ui.reset}  ${import_ui.dim}\xB7  calls: ${r.calledCount}  \xB7  callers: ${r.callerCount}${import_ui.reset}`);
+          console.log();
+        }
+        console.log(`  ${import_ui.dim}${results.length} result(s)${import_ui.reset}
+`);
+      } catch (err) {
+        cg.close();
+        throw err;
+      }
+      return;
+    }
     const hotspots = cg.findHotspots(limit);
     cg.close();
     if (hotspots.length === 0) {

package/dist/bin/commands/hotspots.js.map

@@ -1,7 +1,7 @@
 {
   "version": 3,
   "sources": ["../../../src/bin/commands/hotspots.ts"],
-  "sourcesContent": ["import * as path from 'path';\nimport { Command } from 'commander';\nimport { bold, dim, green, reset, violet } from '../ui';\n\nexport function register(program: Command): void {\n  program\n    .command('hotspots [projectPath]')\n    .description('Find the most-connected symbols by edge degree')\n    .option('--limit <n>', 'Max results (default: 20)', '20')\n    .option('--format <fmt>', 'Output format: table | json', 'table')\n    .action(async (projectPath: string | undefined, opts: { limit: string; format: string }) => {\n      const KiroGraph = (await Promise.resolve().then(() => require('../../index.js'))).default;\n      const target = path.resolve(projectPath ?? process.cwd());\n      const cg = await KiroGraph.open(target);\n      const limit = Math.max(1, Math.min(100, parseInt(opts.limit) || 20));\n      const hotspots = cg.findHotspots(limit);\n      cg.close();\n\n      if (hotspots.length === 0) {\n        console.log(`\\n  ${dim}No symbols found in index.${reset}\\n`);\n        return;\n      }\n\n      if (opts.format === 'json') {\n        console.log(JSON.stringify(hotspots, null, 2));\n        return;\n      }\n\n      console.log();\n      console.log(`  ${violet}${bold}Hotspots${reset}  ${dim}most-connected symbols${reset}\\n`);\n\n      const maxDegree = hotspots[0].degree;\n      const BAR_WIDTH = 20;\n\n      for (let i = 0; i < hotspots.length; i++) {\n        const n = hotspots[i];\n        const rank = String(i + 1).padStart(2);\n        const bar = Math.round((n.degree / maxDegree) * BAR_WIDTH);\n        const barStr = '\u2588'.repeat(bar) + '\u2591'.repeat(BAR_WIDTH - bar);\n        console.log(`  ${dim}${rank}.${reset} ${violet}${bold}${n.name}${reset}  ${dim}${n.kind}${reset}`);\n        console.log(`      ${violet}${barStr}${reset}  ${bold}${n.degree}${reset}${dim} edges (\u2191${n.inDegree} \u2193${n.outDegree})${reset}`);\n        console.log(`      ${dim}${n.filePath}:${n.startLine}${reset}`);\n      }\n\n      console.log(`\\n  ${dim}${hotspots.length} result(s)${reset}\\n`);\n    });\n}\n"],
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-  "names": []
+  "sourcesContent": ["import * as path from 'path';\nimport { Command } from 'commander';\nimport { bold, dim, green, reset, violet } from '../ui';\nimport { loadConfig } from '../../config';\n\nconst SEVERITY_RANK: Record<string, number> = { critical: 4, high: 3, medium: 2, low: 1 };\n\nexport function register(program: Command): void {\n  program\n    .command('hotspots [projectPath]')\n    .description('Find the most-connected symbols by edge degree')\n    .option('--limit <n>', 'Max results (default: 20)', '20')\n    .option('--format <fmt>', 'Output format: table | json', 'table')\n    .option('--security', 'Show only symbols with pattern matches, sorted by severity \u00D7 caller count')\n    .action(async (projectPath: string | undefined, opts: { limit: string; format: string; security?: boolean }) => {\n      const KiroGraph = (await Promise.resolve().then(() => require('../../index.js'))).default;\n      const target = path.resolve(projectPath ?? process.cwd());\n      const cg = await KiroGraph.open(target);\n      const limit = Math.max(1, Math.min(100, parseInt(opts.limit) || 20));\n\n      if (opts.security) {\n        try {\n          const config = await loadConfig(target);\n          if (!config.enablePatterns) {\n            console.error(`\\n  kirograph hotspots --security requires enablePatterns: true and kirograph index to have been run.\\n`);\n            cg.close();\n            process.exit(1);\n          }\n\n          const db = cg.getDatabase();\n          (db as any).applyPatternsSchema?.();\n          const rawDb = db.getRawDb();\n\n          const tableExists = rawDb.get(\"SELECT name FROM sqlite_master WHERE type='table' AND name='pattern_matches'\");\n          if (!tableExists) {\n            console.error(`\\n  kirograph hotspots --security requires enablePatterns: true and kirograph index to have been run.\\n`);\n            cg.close();\n            process.exit(1);\n          }\n\n          // Get all symbols that have pattern matches, with their worst severity\n          const patternSymbols: Array<{ symbol_node_id: string; worst_severity: string; match_count: number; pattern_id: string; file_path: string; start_line: number }> =\n            rawDb.all(`\n              SELECT\n                pm.symbol_node_id,\n                pm.file_path,\n                pm.start_line,\n                pm.pattern_id,\n                CASE MAX(CASE pm.severity WHEN 'critical' THEN 4 WHEN 'high' THEN 3 WHEN 'medium' THEN 2 WHEN 'low' THEN 1 ELSE 0 END)\n                  WHEN 4 THEN 'critical' WHEN 3 THEN 'high' WHEN 2 THEN 'medium' WHEN 1 THEN 'low' ELSE 'unknown'\n                END as worst_severity,\n                COUNT(*) as match_count\n              FROM pattern_matches pm\n              GROUP BY pm.symbol_node_id\n            `);\n\n          if (patternSymbols.length === 0) {\n            console.log(`\\n  ${dim}No pattern matches found. Run kirograph index to populate pattern data.${reset}\\n`);\n            cg.close();\n            return;\n          }\n\n          // Get hotspot data for all symbols, then join with pattern data\n          const hotspots = cg.findHotspots(1000);\n          cg.close();\n\n          const hotspotMap = new Map(hotspots.map(h => [h.id ?? `${h.filePath}:${h.startLine}:${h.name}`, h]));\n\n          // Build security hotspots: combine pattern severity \u00D7 caller count\n          type SecurityHotspot = {\n            name: string;\n            filePath: string;\n            startLine: number;\n            worstSeverity: string;\n            patternId: string;\n            matchCount: number;\n            callerCount: number;\n            calledCount: number;\n            score: number;\n          };\n\n          const secHotspots: SecurityHotspot[] = patternSymbols.map(ps => {\n            const h = hotspotMap.get(ps.symbol_node_id);\n            const callerCount = h?.inDegree ?? 0;\n            const calledCount = h?.outDegree ?? 0;\n            const sevRank = SEVERITY_RANK[ps.worst_severity] ?? 1;\n            return {\n              name: h?.name ?? path.basename(ps.file_path),\n              filePath: ps.file_path,\n              startLine: ps.start_line,\n              worstSeverity: ps.worst_severity,\n              patternId: ps.pattern_id,\n              matchCount: ps.match_count,\n              callerCount,\n              calledCount,\n              score: sevRank * Math.max(1, callerCount),\n            };\n          });\n\n          secHotspots.sort((a, b) => b.score - a.score);\n          const results = secHotspots.slice(0, limit);\n\n          if (opts.format === 'json') {\n            console.log(JSON.stringify(results, null, 2));\n            return;\n          }\n\n          console.log();\n          console.log(`  ${violet}${bold}Security Hotspots${reset}  ${dim}(symbols with pattern matches)${reset}\\n`);\n\n          const severityColor = (sev: string): string => {\n            if (sev === 'critical') return '\\x1b[31m';\n            if (sev === 'high') return '\\x1b[33m';\n            if (sev === 'medium') return '\\x1b[36m';\n            return dim;\n          };\n\n          for (const r of results) {\n            const sevColor = severityColor(r.worstSeverity);\n            const sevTag = `[${r.worstSeverity.toUpperCase()}]`.padEnd(10);\n            console.log(`  ${dim}${r.filePath}:${r.startLine}${reset}   ${violet}${bold}${r.name}${reset}`);\n            console.log(`    ${sevColor}\u25CF ${sevTag}${reset} ${dim}${r.patternId}${reset}  ${dim}\u00B7  calls: ${r.calledCount}  \u00B7  callers: ${r.callerCount}${reset}`);\n            console.log();\n          }\n\n          console.log(`  ${dim}${results.length} result(s)${reset}\\n`);\n        } catch (err) {\n          cg.close();\n          throw err;\n        }\n        return;\n      }\n\n      const hotspots = cg.findHotspots(limit);\n      cg.close();\n\n      if (hotspots.length === 0) {\n        console.log(`\\n  ${dim}No symbols found in index.${reset}\\n`);\n        return;\n      }\n\n      if (opts.format === 'json') {\n        console.log(JSON.stringify(hotspots, null, 2));\n        return;\n      }\n\n      console.log();\n      console.log(`  ${violet}${bold}Hotspots${reset}  ${dim}most-connected symbols${reset}\\n`);\n\n      const maxDegree = hotspots[0].degree;\n      const BAR_WIDTH = 20;\n\n      for (let i = 0; i < hotspots.length; i++) {\n        const n = hotspots[i];\n        const rank = String(i + 1).padStart(2);\n        const bar = Math.round((n.degree / maxDegree) * BAR_WIDTH);\n        const barStr = '\u2588'.repeat(bar) + '\u2591'.repeat(BAR_WIDTH - bar);\n        console.log(`  ${dim}${rank}.${reset} ${violet}${bold}${n.name}${reset}  ${dim}${n.kind}${reset}`);\n        console.log(`      ${violet}${barStr}${reset}  ${bold}${n.degree}${reset}${dim} edges (\u2191${n.inDegree} \u2193${n.outDegree})${reset}`);\n        console.log(`      ${dim}${n.filePath}:${n.startLine}${reset}`);\n      }\n\n      console.log(`\\n  ${dim}${hotspots.length} result(s)${reset}\\n`);\n    });\n}\n"],
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+  "names": ["hotspots"]
 }

package/dist/bin/commands/install.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"install.d.ts","sourceRoot":"","sources":["../../../src/bin/commands/install.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAEpC,wBAAgB,QAAQ,CAAC,OAAO,EAAE,OAAO,GAAG,IAAI,CAQ/C"}
+{"version":3,"file":"install.d.ts","sourceRoot":"","sources":["../../../src/bin/commands/install.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAUpC,wBAAgB,QAAQ,CAAC,OAAO,EAAE,OAAO,GAAG,IAAI,CAyD/C"}

package/dist/bin/commands/install.js

@@ -68,7 +68,7 @@ const INSTALL_TARGETS = [
   "qoder"
 ];
 function register(program) {
-  program.command("install").description("Configure KiroGraph for an agent workspace").option("--target <target>", `Integration target: ${INSTALL_TARGETS.join(", ")}`).option("--all", "Install for all auto-detected platforms without prompting").option("--dry-run", "Show what would be written without making changes").action(async (opts) => {
+  program.command("install").description("Configure KiroGraph for an agent workspace").option("--target <target>", `Integration target: ${INSTALL_TARGETS.join(", ")}`).option("--all", "Install for all auto-detected platforms without prompting").option("--yes", "Skip confirmation prompts and use existing config (non-interactive mode)").option("--dry-run", "Show what would be written without making changes").action(async (opts) => {
     if (opts.target) {
       const target = opts.target.toLowerCase();
       if (target !== "all" && !INSTALL_TARGETS.includes(target)) {
@@ -80,7 +80,7 @@ function register(program) {
         await runAutoDetectInstaller({ skipPrompt: true, dryRun: opts.dryRun });
       } else {
         const { runInstaller } = await Promise.resolve().then(() => require("../installer/index.js"));
-        await runInstaller(target);
+        await runInstaller(target, { yes: opts.yes });
       }
     } else if (opts.all) {
       const { runAutoDetectInstaller } = await Promise.resolve().then(() => require("../installer/auto-detect.js"));
@@ -110,7 +110,7 @@ function register(program) {
         await runAutoDetectInstaller({ skipPrompt: false, skipBanner: true, dryRun: opts.dryRun });
       } else {
         const { runInstaller } = await Promise.resolve().then(() => require("../installer/index.js"));
-        await runInstaller("kiro");
+        await runInstaller("kiro", { yes: opts.yes });
       }
     }
   });

package/dist/bin/commands/install.js.map

@@ -1,7 +1,7 @@
 {
   "version": 3,
   "sources": ["../../../src/bin/commands/install.ts"],
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+  "sourcesContent": ["import { Command } from 'commander';\n\nconst INSTALL_TARGETS = [\n  'kiro', 'claude', 'codex', 'cursor', 'antigravity', 'opencode',\n  'windsurf', 'cline', 'copilot', 'copilot-cli', 'junie', 'gemini-cli',\n  'continue', 'roo', 'warp', 'aider', 'trae',\n  'augment', 'kilo', 'amp', 'devin', 'replit', 'goose', 'openhands', 'tabnine',\n  'mistral-vibe', 'ibm-bob', 'crush', 'droid-factory', 'forgecode', 'iflow', 'qwen', 'rovo', 'qoder',\n];\n\nexport function register(program: Command): void {\n  program\n    .command('install')\n    .description('Configure KiroGraph for an agent workspace')\n    .option('--target <target>', `Integration target: ${INSTALL_TARGETS.join(', ')}`)\n    .option('--all', 'Install for all auto-detected platforms without prompting')\n    .option('--yes', 'Skip confirmation prompts and use existing config (non-interactive mode)')\n    .option('--dry-run', 'Show what would be written without making changes')\n    .action(async (opts: { target?: string; all?: boolean; yes?: boolean; dryRun?: boolean }) => {\n      if (opts.target) {\n        // Explicit target: validate and install\n        const target = opts.target.toLowerCase();\n        if (target !== 'all' && !INSTALL_TARGETS.includes(target)) {\n          console.error(`Unknown install target: ${opts.target}. Choose from: ${INSTALL_TARGETS.join(', ')}`);\n          process.exit(1);\n        }\n\n        if (target === 'all') {\n          // --target all is an alias for --all\n          const { runAutoDetectInstaller } = await Promise.resolve().then(() => require('../installer/auto-detect.js'));\n          await runAutoDetectInstaller({ skipPrompt: true, dryRun: opts.dryRun });\n        } else {\n          const { runInstaller } = await Promise.resolve().then(() => require('../installer/index.js'));\n          await runInstaller(target as any, { yes: opts.yes });\n        }\n      } else if (opts.all) {\n        // --all flag: auto-detect and install all without prompting\n        const { runAutoDetectInstaller } = await Promise.resolve().then(() => require('../installer/auto-detect.js'));\n        await runAutoDetectInstaller({ skipPrompt: true, dryRun: opts.dryRun });\n      } else {\n        // No target specified: ask Kiro-only vs auto-detect\n        const readline = await import('readline');\n        const rl = readline.createInterface({ input: process.stdin, output: process.stdout });\n        const bold = '\\x1b[1m';\n        const dim = '\\x1b[2m';\n        const violet = '\\x1b[38;5;99m';\n        const reset = '\\x1b[0m';\n        const { printBanner } = await Promise.resolve().then(() => require('../banner.js'));\n        printBanner();\n        console.log(`  ${bold}How do you want to install KiroGraph?${reset}\\n`);\n        console.log(`  ${violet}1${reset}  Kiro only ${dim}(recommended \u2014 full support with IDE hooks, steering, CLI agent)${reset}`);\n        console.log(`  ${violet}2${reset}  Auto-detect ${dim}(configure all AI tools found in this environment)${reset}\\n`);\n        const answer = await new Promise<string>((resolve) => {\n          rl.question(`  Choose [1/2]: `, resolve);\n        });\n        rl.close();\n        console.log();\n        const choice = answer.trim();\n        if (choice === '2') {\n          const { runAutoDetectInstaller } = await Promise.resolve().then(() => require('../installer/auto-detect.js'));\n          await runAutoDetectInstaller({ skipPrompt: false, skipBanner: true, dryRun: opts.dryRun });\n        } else {\n          // Default to Kiro (choice === '1' or Enter)\n          const { runInstaller } = await Promise.resolve().then(() => require('../installer/index.js'));\n          await runInstaller('kiro', { yes: opts.yes });\n        }\n      }\n    });\n}\n"],
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package/dist/bin/commands/licenses.d.ts

@@ -0,0 +1,3 @@
+import { Command } from 'commander';
+export declare function register(program: Command): void;
+//# sourceMappingURL=licenses.d.ts.map

package/dist/bin/commands/licenses.d.ts.map

@@ -0,0 +1 @@
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package/dist/bin/commands/memory.d.ts

@@ -0,0 +1,16 @@
+/**
+ * KiroGraph Memory CLI — mirrors MCP tools + maintenance commands
+ *
+ * kirograph mem search <query>
+ * kirograph mem store <content>
+ * kirograph mem timeline
+ * kirograph mem status
+ * kirograph mem prune
+ * kirograph mem export
+ * kirograph mem import
+ * kirograph mem reembed
+ * kirograph mem lint
+ */
+import { Command } from 'commander';
+export declare function register(program: Command): void;
+//# sourceMappingURL=memory.d.ts.map

package/dist/bin/commands/memory.d.ts.map

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