ketcher-react 3.12.0-rc.1 → 3.12.0-rc.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/dist/cjs/index.js CHANGED
@@ -8535,7 +8535,7 @@ var zoom = {
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  var openHelpLink = function openHelpLink() {
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  var _window$open;
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- return (_window$open = window.open("https://github.com/epam/ketcher/blob/".concat("v3.12.0-rc.1\n", "/documentation/help.md#ketcher-overview"))) === null || _window$open === void 0 ? void 0 : _window$open.focus();
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+ return (_window$open = window.open("https://github.com/epam/ketcher/blob/".concat("v3.12.0-rc.2\n", "/documentation/help.md#ketcher-overview"))) === null || _window$open === void 0 ? void 0 : _window$open.focus();
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  };
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  var help = {
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  help: {
@@ -26297,6 +26297,7 @@ var Editor$3 = function () {
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  var _this2 = this;
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  var forceAddNewLeavingGroupAtom = arguments.length > 4 && arguments[4] !== undefined ? arguments[4] : false;
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  var leavingAtomLabel = arguments.length > 5 && arguments[5] !== undefined ? arguments[5] : ketcherCore.AtomLabel.H;
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+ var leavingAtomPosition = arguments.length > 6 ? arguments[6] : undefined;
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  assert_1(this.monomerCreationState);
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  var potentialLeavingAtoms = this.monomerCreationState.potentialAttachmentPoints.get(atomId);
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  var leavingAtomId;
@@ -26326,7 +26327,7 @@ var Editor$3 = function () {
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  stereo: ketcherCore.Bond.PATTERN.STEREO.NONE
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  }, atomId, {
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  label: leavingAtomLabel
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- }),
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+ }, undefined, leavingAtomPosition),
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  _fromBondAddition2 = _slicedToArray__default["default"](_fromBondAddition, 4),
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  bondAdditionAction = _fromBondAddition2[0],
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  endAtomId = _fromBondAddition2[2],
@@ -32487,14 +32488,18 @@ var MonomerCreationWizard = function MonomerCreationWizard() {
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  });
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  var bondBetweenSugarAndBase = _toConsumableArray__default["default"](bondsBetweenSugarAndBase.values())[0];
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  var bondBetweenSugarAndPhosphate = _toConsumableArray__default["default"](bondsBetweenSugarAndPhosphate.values())[0];
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- var sugarR3AttachmentPointAtom = sugarStructure !== null && sugarStructure !== void 0 && (_sugarStructure$atoms5 = sugarStructure.atoms) !== null && _sugarStructure$atoms5 !== void 0 && _sugarStructure$atoms5.includes(bondBetweenSugarAndBase.begin) ? bondBetweenSugarAndBase.begin : bondBetweenSugarAndBase.end;
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- var sugarR2AttachmentPointAtom = sugarStructure !== null && sugarStructure !== void 0 && (_sugarStructure$atoms6 = sugarStructure.atoms) !== null && _sugarStructure$atoms6 !== void 0 && _sugarStructure$atoms6.includes(bondBetweenSugarAndPhosphate.begin) ? bondBetweenSugarAndPhosphate.begin : bondBetweenSugarAndPhosphate.end;
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- var baseR1AttachmentPointAtom = baseStructure !== null && baseStructure !== void 0 && (_baseStructure$atoms3 = baseStructure.atoms) !== null && _baseStructure$atoms3 !== void 0 && _baseStructure$atoms3.includes(bondBetweenSugarAndBase.begin) ? bondBetweenSugarAndBase.begin : bondBetweenSugarAndBase.end;
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- var phosphateR1AttachmentPointAtom = phosphateStructure !== null && phosphateStructure !== void 0 && (_phosphateStructure$a3 = phosphateStructure.atoms) !== null && _phosphateStructure$a3 !== void 0 && _phosphateStructure$a3.includes(bondBetweenSugarAndPhosphate.begin) ? bondBetweenSugarAndPhosphate.begin : bondBetweenSugarAndPhosphate.end;
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- editor.assignConnectionPointAtom(baseR1AttachmentPointAtom, ketcherCore.AttachmentPointName.R1, assignedAttachmentPointsByMonomer.get(rnaPresetWizardState.base), rnaPresetWizardState.base.structure, true, getLeavingAtomForAttachmentPoint(ketcherCore.KetMonomerClass.Base, ketcherCore.AttachmentPointName.R1));
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- editor.assignConnectionPointAtom(sugarR2AttachmentPointAtom, ketcherCore.AttachmentPointName.R2, assignedAttachmentPointsByMonomer.get(rnaPresetWizardState.sugar), rnaPresetWizardState.sugar.structure, true, getLeavingAtomForAttachmentPoint(ketcherCore.KetMonomerClass.Sugar, ketcherCore.AttachmentPointName.R2));
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- editor.assignConnectionPointAtom(sugarR3AttachmentPointAtom, ketcherCore.AttachmentPointName.R3, assignedAttachmentPointsByMonomer.get(rnaPresetWizardState.sugar), rnaPresetWizardState.sugar.structure, true, getLeavingAtomForAttachmentPoint(ketcherCore.KetMonomerClass.Sugar, ketcherCore.AttachmentPointName.R3));
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- editor.assignConnectionPointAtom(phosphateR1AttachmentPointAtom, ketcherCore.AttachmentPointName.R1, assignedAttachmentPointsByMonomer.get(rnaPresetWizardState.phosphate), rnaPresetWizardState.phosphate.structure, true, getLeavingAtomForAttachmentPoint(ketcherCore.KetMonomerClass.Phosphate, ketcherCore.AttachmentPointName.R1));
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+ var sugarR3AttachmentPointAtomId = sugarStructure !== null && sugarStructure !== void 0 && (_sugarStructure$atoms5 = sugarStructure.atoms) !== null && _sugarStructure$atoms5 !== void 0 && _sugarStructure$atoms5.includes(bondBetweenSugarAndBase.begin) ? bondBetweenSugarAndBase.begin : bondBetweenSugarAndBase.end;
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+ var sugarR3AttachmentAtom = struct.atoms.get(sugarR3AttachmentPointAtomId);
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+ var sugarR2AttachmentPointAtomId = sugarStructure !== null && sugarStructure !== void 0 && (_sugarStructure$atoms6 = sugarStructure.atoms) !== null && _sugarStructure$atoms6 !== void 0 && _sugarStructure$atoms6.includes(bondBetweenSugarAndPhosphate.begin) ? bondBetweenSugarAndPhosphate.begin : bondBetweenSugarAndPhosphate.end;
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+ var sugarR2AttachmentAtom = struct.atoms.get(sugarR2AttachmentPointAtomId);
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+ var baseR1AttachmentPointAtomId = baseStructure !== null && baseStructure !== void 0 && (_baseStructure$atoms3 = baseStructure.atoms) !== null && _baseStructure$atoms3 !== void 0 && _baseStructure$atoms3.includes(bondBetweenSugarAndBase.begin) ? bondBetweenSugarAndBase.begin : bondBetweenSugarAndBase.end;
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+ var baseR1AttachmentAtom = struct.atoms.get(baseR1AttachmentPointAtomId);
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+ var phosphateR1AttachmentPointAtomId = phosphateStructure !== null && phosphateStructure !== void 0 && (_phosphateStructure$a3 = phosphateStructure.atoms) !== null && _phosphateStructure$a3 !== void 0 && _phosphateStructure$a3.includes(bondBetweenSugarAndPhosphate.begin) ? bondBetweenSugarAndPhosphate.begin : bondBetweenSugarAndPhosphate.end;
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+ var phosphateR1AttachmentAtom = struct.atoms.get(phosphateR1AttachmentPointAtomId);
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+ editor.assignConnectionPointAtom(baseR1AttachmentPointAtomId, ketcherCore.AttachmentPointName.R1, assignedAttachmentPointsByMonomer.get(rnaPresetWizardState.base), rnaPresetWizardState.base.structure, true, getLeavingAtomForAttachmentPoint(ketcherCore.KetMonomerClass.Base, ketcherCore.AttachmentPointName.R1), sugarR3AttachmentAtom === null || sugarR3AttachmentAtom === void 0 ? void 0 : sugarR3AttachmentAtom.pp);
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+ editor.assignConnectionPointAtom(sugarR2AttachmentPointAtomId, ketcherCore.AttachmentPointName.R2, assignedAttachmentPointsByMonomer.get(rnaPresetWizardState.sugar), rnaPresetWizardState.sugar.structure, true, getLeavingAtomForAttachmentPoint(ketcherCore.KetMonomerClass.Sugar, ketcherCore.AttachmentPointName.R2), phosphateR1AttachmentAtom === null || phosphateR1AttachmentAtom === void 0 ? void 0 : phosphateR1AttachmentAtom.pp);
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+ editor.assignConnectionPointAtom(sugarR3AttachmentPointAtomId, ketcherCore.AttachmentPointName.R3, assignedAttachmentPointsByMonomer.get(rnaPresetWizardState.sugar), rnaPresetWizardState.sugar.structure, true, getLeavingAtomForAttachmentPoint(ketcherCore.KetMonomerClass.Sugar, ketcherCore.AttachmentPointName.R3), baseR1AttachmentAtom === null || baseR1AttachmentAtom === void 0 ? void 0 : baseR1AttachmentAtom.pp);
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+ editor.assignConnectionPointAtom(phosphateR1AttachmentPointAtomId, ketcherCore.AttachmentPointName.R1, assignedAttachmentPointsByMonomer.get(rnaPresetWizardState.phosphate), rnaPresetWizardState.phosphate.structure, true, getLeavingAtomForAttachmentPoint(ketcherCore.KetMonomerClass.Phosphate, ketcherCore.AttachmentPointName.R1), sugarR2AttachmentAtom === null || sugarR2AttachmentAtom === void 0 ? void 0 : sugarR2AttachmentAtom.pp);
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  }
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  monomersToSave.forEach(function (monomerToSave) {
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  var atomIdMap = new Map();
@@ -40976,8 +40981,8 @@ var KetcherBuilder = function () {
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  cleanup = initApp(prevKetcherId, ketcherId, element, appRoot, staticResourcesUrl, {
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  buttons: buttons || {},
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  errorHandler: errorHandler || null,
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- version: "3.12.0-rc.1" ,
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- buildDate: "2026-01-08T17:45:33" ,
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+ version: "3.12.0-rc.2" ,
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+ buildDate: "2026-01-27T21:17:45" ,
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  buildNumber: '',
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  customButtons: customButtons || []
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  }, structService, resolve, togglerComponent);
@@ -41278,7 +41283,7 @@ var ModeControl = function ModeControl(_ref3) {
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  function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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  function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty__default["default"](e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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  var MacromoleculesEditorComponent = React.lazy(function () {
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- return Promise.resolve().then(function () { return require('./index.modern-4b58287a.js'); });
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+ return Promise.resolve().then(function () { return require('./index.modern-0386b391.js'); });
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  });
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  var Editor = function Editor(props) {
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  var _useState = React.useState(false),